ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf50c24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC006258.1| Arabidopsis thaliana BAC F18G18 from chromosome V... 44 0.60
2gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosom... 44 0.60
3emb|CR339054.14| Zebrafish DNA sequence from clone DKEY-151M22 i... 44 0.60
4emb|CR956437.2| Human DNA sequence from clone XX-FW2439FW1777L o... 44 0.60
5emb|AL954842.7| Zebrafish DNA sequence from clone DKEY-33E5 in l... 44 0.60
6gb|AC153929.3| Mus musculus 10 BAC RP24-364H18 (Roswell Park Can... 44 0.60
7gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome 42 2.4
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
9gb|AC023826.6| Homo sapiens chromosome 16 clone RP11-380E14, com... 42 2.4
10gb|AC007597.3|AC007597 Homo sapiens chromosome 16 clone RP11-137... 42 2.4
11dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
12dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
13gb|AC131532.7| Homo sapiens 12 BAC RP11-408B11 (Roswell Park Can... 42 2.4
14gb|AC189400.1| Brassica rapa subsp. pekinensis clone KBrB056L15,... 40 9.4
15ref|XR_002705.1| PREDICTED: Mus musculus similar to ATP-binding ... 40 9.4
16ref|XR_004783.1| PREDICTED: Mus musculus similar to ATP-binding ... 40 9.4
17ref|XR_002088.1| PREDICTED: Mus musculus similar to ATP-binding ... 40 9.4
18ref|NM_113329.1| Arabidopsis thaliana ATP binding / protein kina... 40 9.4
19gb|AC118621.6| Mus musculus chromosome 7, clone RP24-63H14, comp... 40 9.4
20gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, comp... 40 9.4
21gb|AC112681.12| Mus musculus chromosome 16, clone RP23-272P19, c... 40 9.4
22gb|AC159646.2| Mus musculus BAC clone RP23-192K23 from chromosom... 40 9.4
23gb|AF228661.4| Homo sapiens chromosome 8 clone CTD-3015B2 map q1... 40 9.4
24gb|AC079906.15| Homo sapiens 12q BAC RP11-618L22 (Roswell Park C... 40 9.4
25gb|AC104939.7| Homo sapiens chromosome 8, clone CTD-3015B2, comp... 40 9.4
26dbj|AK036062.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 9.4
27gb|AF512555.1| Homo sapiens excision repair cross-complementing ... 40 9.4
28gb|AC093062.2| Homo sapiens chromosome 19 clone LLNLR-225C12, co... 40 9.4
29emb|AL354802.15| Human DNA sequence from clone RP11-54O10 on chr... 40 9.4
30emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chr... 40 9.4
31emb|AJ550163.1|ATH550163 Arabidopsis thaliana mRNA for LRR recep... 40 9.4
32emb|AL592215.12| Mouse DNA sequence from clone RP23-172P19 on ch... 40 9.4
33gb|AC127279.3| Mus musculus BAC clone RP24-247K4 from chromosome... 40 9.4
34gb|AC139353.3| Homo sapiens chromosome 19 clone LLNLR-257F11, co... 40 9.4
35gb|AC022520.2|AC022520 Arabidopsis thaliana chromosome I BAC F8L... 40 9.4
36gb|AY162861.1| Berberis gilgiana PI-2 mRNA, partial cds 40 9.4
37gb|AY162860.1| Berberis gilgiana PI-1 mRNA, partial cds 40 9.4
38gb|AF215845.3| Homo sapiens chromosome 8 clone CTD-2542N7 map q1... 40 9.4
39dbj|AB028621.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 9.4
40gb|AC092855.39| Mus musculus strain C57BL/6J chromosome 3 clone ... 40 9.4
41gb|AC121300.11| Mus musculus chromosome 6, clone RP23-408I12, co... 40 9.4
42ref|XM_321087.2| Anopheles gambiae str. PEST ENSANGP00000018446 ... 40 9.4
43emb|AJ272583.1|APL272583 Anas platyrhynchos microsatellite DNA, ... 40 9.4
44dbj|AP002991.3| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 9.4
45gb|AC130216.4| Mus musculus BAC clone RP23-218G9 from 10, comple... 40 9.4
46gb|AC133079.4| Mus musculus BAC clone RP24-468O18 from 12, compl... 40 9.4
47gb|AC111037.8| Mus musculus chromosome 5, clone RP24-299M10, com... 40 9.4
48emb|AL954720.14| Mouse DNA sequence from clone RP23-58C21 on chr... 40 9.4
49emb|AL607041.18| Mouse DNA sequence from clone RP23-434K11 on ch... 40 9.4
50emb|AL672148.8| Mouse DNA sequence from clone RP23-369O15 on chr... 40 9.4
51gb|M63796.1|HUMMMDA Human DNA from cosmid MMDA from chromosome 1... 40 9.4
52dbj|AP000997.1| Homo sapiens DNA, chromosome 11q23.2, clone:194K... 40 9.4

>gb|AC006258.1| Arabidopsis thaliana BAC F18G18 from chromosome V near 60.5 cM,
             complete sequence
          Length = 110469
 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 504   cttctcttctctttgttcatgt 525
             ||||||||||||||||||||||
Sbjct: 53746 cttctcttctctttgttcatgt 53725



to top

>gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosome 17, complete
             sequence
          Length = 192971

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 503   acttctcttctctttgttcatg 524
             ||||||||||||||||||||||
Sbjct: 99870 acttctcttctctttgttcatg 99849



to top

>emb|CR339054.14| Zebrafish DNA sequence from clone DKEY-151M22 in linkage group 23,
              complete sequence
          Length = 184755

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 498    tcttcacttctcttctctttgt 519
              ||||||||||||||||||||||
Sbjct: 121711 tcttcacttctcttctctttgt 121732



to top

>emb|CR956437.2| Human DNA sequence from clone XX-FW2439FW1777L on chromosome 22,
           complete sequence
          Length = 3008

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 547 gtgttgtgtgtctgtgtgatttctgg 572
           ||||||||||| ||||||||||||||
Sbjct: 940 gtgttgtgtgtttgtgtgatttctgg 915



to top

>emb|AL954842.7| Zebrafish DNA sequence from clone DKEY-33E5 in linkage group 8,
             complete sequence
          Length = 169016

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 498   tcttcacttctcttctctttgt 519
             ||||||||||||||||||||||
Sbjct: 17046 tcttcacttctcttctctttgt 17025



to top

>gb|AC153929.3| Mus musculus 10 BAC RP24-364H18 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 173752

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 551    tgtgtgtctgtgtgatttctgg 572
              ||||||||||||||||||||||
Sbjct: 121699 tgtgtgtctgtgtgatttctgg 121720



to top

>gb|CP000386.1| Rubrobacter xylanophilus DSM 9941, complete genome
          Length = 3225748

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 403     ccgagctgcccaaggtggagc 423
               |||||||||||||||||||||
Sbjct: 1151252 ccgagctgcccaaggtggagc 1151272



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 501     tcacttctcttctctttgttc 521
               |||||||||||||||||||||
Sbjct: 2646619 tcacttctcttctctttgttc 2646599



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 491      aaggttgtcttcacttctcttctct 515
                |||||||||| ||||||||||||||
Sbjct: 26260866 aaggttgtctccacttctcttctct 26260890



to top

>gb|AC023826.6| Homo sapiens chromosome 16 clone RP11-380E14, complete sequence
          Length = 196755

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 141   gaggaggagatggctccatcc 161
             |||||||||||||||||||||
Sbjct: 44151 gaggaggagatggctccatcc 44171



to top

>gb|AC007597.3|AC007597 Homo sapiens chromosome 16 clone RP11-137H10, complete sequence
          Length = 192814

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 141   gaggaggagatggctccatcc 161
             |||||||||||||||||||||
Sbjct: 31027 gaggaggagatggctccatcc 31007



to top

>dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1159_D09
          Length = 147770

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 491   aaggttgtcttcacttctcttctct 515
             |||||||||| ||||||||||||||
Sbjct: 73547 aaggttgtctccacttctcttctct 73571



to top

>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0434B04
          Length = 167029

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 501   tcacttctcttctctttgttc 521
             |||||||||||||||||||||
Sbjct: 96394 tcacttctcttctctttgttc 96374



to top

>gb|AC131532.7| Homo sapiens 12 BAC RP11-408B11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 85167

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 500   ttcacttctcttctctttgtt 520
             |||||||||||||||||||||
Sbjct: 31049 ttcacttctcttctctttgtt 31069



to top

>gb|AC189400.1| Brassica rapa subsp. pekinensis clone KBrB056L15, complete sequence
          Length = 117834

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 549   gttgtgtgtctgtgtgattt 568
             ||||||||||||||||||||
Sbjct: 52078 gttgtgtgtctgtgtgattt 52097



to top

>ref|XR_002705.1| PREDICTED: Mus musculus similar to ATP-binding cassette, sub-family F
            (GCN20), member 1 (LOC629369), mRNA
          Length = 2414

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 136  tgctagaggaggagatggct 155
            ||||||||||||||||||||
Sbjct: 1108 tgctagaggaggagatggct 1127



to top

>ref|XR_004783.1| PREDICTED: Mus musculus similar to ATP-binding cassette, sub-family F
            (GCN20), member 1 (LOC675478), mRNA
          Length = 2567

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 136  tgctagaggaggagatggct 155
            ||||||||||||||||||||
Sbjct: 1108 tgctagaggaggagatggct 1127



to top

>ref|XR_002088.1| PREDICTED: Mus musculus similar to ATP-binding cassette, sub-family F
            (GCN20), member 1 (LOC667852), mRNA
          Length = 2566

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 136  tgctagaggaggagatggct 155
            ||||||||||||||||||||
Sbjct: 1108 tgctagaggaggagatggct 1127



to top

>ref|NM_113329.1| Arabidopsis thaliana ATP binding / protein kinase/ protein
           serine/threonine kinase/ protein-tyrosine kinase
           (AT3G24240) mRNA, complete cds
          Length = 3426

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 498 tcttcacttctcttctcttt 517
           ||||||||||||||||||||
Sbjct: 40  tcttcacttctcttctcttt 59



to top

>gb|AC118621.6| Mus musculus chromosome 7, clone RP24-63H14, complete sequence
          Length = 230898

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 550    ttgtgtgtctgtgtgatttc 569
              ||||||||||||||||||||
Sbjct: 107109 ttgtgtgtctgtgtgatttc 107090



to top

>gb|AC093351.8| Mus musculus chromosome 7, clone RP23-16L19, complete sequence
          Length = 239688

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 513    tctttgttcatgtgcttaca 532
              ||||||||||||||||||||
Sbjct: 201476 tctttgttcatgtgcttaca 201495



to top

>gb|AC112681.12| Mus musculus chromosome 16, clone RP23-272P19, complete sequence
          Length = 228367

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    tcttcacttctcttctcttt 517
              ||||||||||||||||||||
Sbjct: 104354 tcttcacttctcttctcttt 104335



to top

>gb|AC159646.2| Mus musculus BAC clone RP23-192K23 from chromosome 12, complete
             sequence
          Length = 194901

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    acaagagctagctagctaga 37
             ||||||||||||||||||||
Sbjct: 94983 acaagagctagctagctaga 94964



to top

>gb|AF228661.4| Homo sapiens chromosome 8 clone CTD-3015B2 map q11-q13, complete
             sequence
          Length = 140374

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   tgtgtgtctgtgtgatttct 570
             ||||||||||||||||||||
Sbjct: 35872 tgtgtgtctgtgtgatttct 35853



to top

>gb|AC079906.15| Homo sapiens 12q BAC RP11-618L22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 180688

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 498    tcttcacttctcttctcttt 517
              ||||||||||||||||||||
Sbjct: 152685 tcttcacttctcttctcttt 152666



to top

>gb|AC104939.7| Homo sapiens chromosome 8, clone CTD-3015B2, complete sequence
          Length = 140375

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 551   tgtgtgtctgtgtgatttct 570
             ||||||||||||||||||||
Sbjct: 35646 tgtgtgtctgtgtgatttct 35627



to top

>dbj|AK036062.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630031M17 product:nuclear factor
            of activated T-cells, cytoplasmic 2, full insert sequence
          Length = 2947

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 550  ttgtgtgtctgtgtgatttc 569
            ||||||||||||||||||||
Sbjct: 2319 ttgtgtgtctgtgtgatttc 2338



to top

>gb|AF512555.1| Homo sapiens excision repair cross-complementing rodent repair
             deficiency, complementation group 1 (includes overlapping
             antisense sequence) (ERCC1) gene, complete cds
          Length = 17285

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    ttcctcattggattgcttct 103
             ||||||||||||||||||||
Sbjct: 12545 ttcctcattggattgcttct 12526



to top

>gb|AC093062.2| Homo sapiens chromosome 19 clone LLNLR-225C12, complete sequence
          Length = 8197

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 547  gtgttgtgtgtctgtgtgat 566
            ||||||||||||||||||||
Sbjct: 2940 gtgttgtgtgtctgtgtgat 2959



to top

>emb|AL354802.15| Human DNA sequence from clone RP11-54O10 on chromosome 13 Contains part
              of the TRPC4 gene transient receptor potential cation
              channel, subfamily C, member 4, complete sequence
          Length = 171184

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 542    tggtcgtgttgtgtgtctgtgtga 565
              |||| |||||||||||||||||||
Sbjct: 109184 tggtagtgttgtgtgtctgtgtga 109207



to top

>emb|AL589879.21| Mouse DNA sequence from clone RP23-38E20 on chromosome 13 Contains the
              genes for H2b histone family member A, two H2a, two H4 and
              an H2b histone family member, a serine/threonine protein
              kinase pseudogene, a novel pseudogene, a novel gene
              (4930500C15Rik), the gene for a novel KRAB box and C2H2
              Zinc Finger containing protein, a ribosomal protein L21
              (RPL21) pseudogene, a TU mitochondrial translation
              elongation factor (tufa) pseudogene, the 5' end of the gene
              for a novel protein similar to nuclear envelope pore
              membrane protein POM121 and four CpG islands, complete
              sequence
          Length = 182817

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 551    tgtgtgtctgtgtgatttct 570
              ||||||||||||||||||||
Sbjct: 178541 tgtgtgtctgtgtgatttct 178522



to top

>emb|AJ550163.1|ATH550163 Arabidopsis thaliana mRNA for LRR receptor-like kinase 2 (rch2
           gene)
          Length = 3770

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 498 tcttcacttctcttctcttt 517
           ||||||||||||||||||||
Sbjct: 167 tcttcacttctcttctcttt 186



to top

>emb|AL592215.12| Mouse DNA sequence from clone RP23-172P19 on chromosome 11 Contains two
             novel genes (4930452L02Rik and B430319H21Rik), the 3' end
             of the gene for a novel protein (1700019I23Rik), the gene
             for a novel protein (4933407G07Rik), the Pmp22 gene for
             peripheral myelin protein and a CpG island, complete
             sequence
          Length = 219468

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 564   gatttctggcgaatcatttgtgtg 587
             ||||||||| ||||||||||||||
Sbjct: 69008 gatttctggtgaatcatttgtgtg 68985



to top

>gb|AC127279.3| Mus musculus BAC clone RP24-247K4 from chromosome 10, complete sequence
          Length = 185573

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 187   taccaaagctgcccaaggtt 206
             ||||||||||||||||||||
Sbjct: 35039 taccaaagctgcccaaggtt 35058



to top

>gb|AC139353.3| Homo sapiens chromosome 19 clone LLNLR-257F11, complete sequence
          Length = 38480

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    ttcctcattggattgcttct 103
             ||||||||||||||||||||
Sbjct: 27539 ttcctcattggattgcttct 27520



to top

>gb|AC022520.2|AC022520 Arabidopsis thaliana chromosome I BAC F8L10 genomic sequence, complete
             sequence
          Length = 110611

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 498   tcttcacttctcttctcttt 517
             ||||||||||||||||||||
Sbjct: 42656 tcttcacttctcttctcttt 42675



to top

>gb|AY162861.1| Berberis gilgiana PI-2 mRNA, partial cds
          Length = 786

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 aagaatgctagaggaggaga 150
           ||||||||||||||||||||
Sbjct: 375 aagaatgctagaggaggaga 394



to top

>gb|AY162860.1| Berberis gilgiana PI-1 mRNA, partial cds
          Length = 793

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 aagaatgctagaggaggaga 150
           ||||||||||||||||||||
Sbjct: 375 aagaatgctagaggaggaga 394



to top

>gb|AF215845.3| Homo sapiens chromosome 8 clone CTD-2542N7 map q11-q13, complete sequence
          Length = 237705

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 551    tgtgtgtctgtgtgatttct 570
              ||||||||||||||||||||
Sbjct: 172701 tgtgtgtctgtgtgatttct 172682



to top

>dbj|AB028621.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUJ8
          Length = 78921

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 498   tcttcacttctcttctcttt 517
             ||||||||||||||||||||
Sbjct: 77231 tcttcacttctcttctcttt 77250



to top

>gb|AC092855.39| Mus musculus strain C57BL/6J chromosome 3 clone rp23-49o17, complete
             sequence
          Length = 249205

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 498   tcttcacttctcttctctttgttc 521
             ||||| ||||||||||||||||||
Sbjct: 92967 tcttctcttctcttctctttgttc 92944



to top

>gb|AC121300.11| Mus musculus chromosome 6, clone RP23-408I12, complete sequence
          Length = 212218

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 512    ctctttgttcatgtgcttac 531
              ||||||||||||||||||||
Sbjct: 196416 ctctttgttcatgtgcttac 196397



to top

>ref|XM_321087.2| Anopheles gambiae str. PEST ENSANGP00000018446
           (ENSANGG00000015957), partial mRNA
          Length = 729

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 403 ccgagctgcccaaggtggag 422
           ||||||||||||||||||||
Sbjct: 407 ccgagctgcccaaggtggag 426



to top

>emb|AJ272583.1|APL272583 Anas platyrhynchos microsatellite DNA, clone D1A6
          Length = 447

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 547 gtgttgtgtgtctgtgtgatttct 570
           ||||||||||| ||||||||||||
Sbjct: 313 gtgttgtgtgtgtgtgtgatttct 290



to top

>dbj|AP002991.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-774J1, complete
            sequence
          Length = 167901

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 503  acttctcttctctttgttca 522
            ||||||||||||||||||||
Sbjct: 4538 acttctcttctctttgttca 4519



to top

>gb|AC130216.4| Mus musculus BAC clone RP23-218G9 from 10, complete sequence
          Length = 182204

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 187   taccaaagctgcccaaggtt 206
             ||||||||||||||||||||
Sbjct: 27416 taccaaagctgcccaaggtt 27397



to top

>gb|AC133079.4| Mus musculus BAC clone RP24-468O18 from 12, complete sequence
          Length = 176177

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    acaagagctagctagctaga 37
             ||||||||||||||||||||
Sbjct: 30651 acaagagctagctagctaga 30670



to top

>gb|AC111037.8| Mus musculus chromosome 5, clone RP24-299M10, complete sequence
          Length = 155488

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 547   gtgttgtgtgtctgtgtgat 566
             ||||||||||||||||||||
Sbjct: 36395 gtgttgtgtgtctgtgtgat 36376



to top

>emb|AL954720.14| Mouse DNA sequence from clone RP23-58C21 on chromosome X, complete
             sequence
          Length = 28204

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 136   tgctagaggaggagatggct 155
             ||||||||||||||||||||
Sbjct: 18655 tgctagaggaggagatggct 18674



to top

>emb|AL607041.18| Mouse DNA sequence from clone RP23-434K11 on chromosome 11, complete
             sequence
          Length = 198761

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 451   tcctcgagttccagttcctg 470
             ||||||||||||||||||||
Sbjct: 36971 tcctcgagttccagttcctg 36990



to top

>emb|AL672148.8| Mouse DNA sequence from clone RP23-369O15 on chromosome X, complete
             sequence
          Length = 130107

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 498   tcttcacttctcttctcttt 517
             ||||||||||||||||||||
Sbjct: 72914 tcttcacttctcttctcttt 72895



to top

>gb|M63796.1|HUMMMDA Human DNA from cosmid MMDA from chromosome 19q13.3 (obtained by
             automated sequence analysis)
          Length = 37314

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    ttcctcattggattgcttct 103
             ||||||||||||||||||||
Sbjct: 11876 ttcctcattggattgcttct 11895



to top

>dbj|AP000997.1| Homo sapiens DNA, chromosome 11q23.2, clone:194K16, the region having
             tumor suppressor activity, complete sequence
          Length = 130448

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 503   acttctcttctctttgttca 522
             ||||||||||||||||||||
Sbjct: 23223 acttctcttctctttgttca 23242


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 104,637,321
Number of extensions: 6025598
Number of successful extensions: 288747
Number of sequences better than 10.0: 52
Number of HSP's gapped: 288747
Number of HSP's successfully gapped: 53
Length of query: 637
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 615
Effective length of database: 18,508,616,841
Effective search space: 11382799357215
Effective search space used: 11382799357215
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top