ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf52j15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK072985:Os02g0293400 | 156 | 9e-39 | 2 | AK120816:Os01g0234900 | 142 | 1e-34 | 3 | Os05g0238200:Os05g0238200 | 142 | 2e-34 | 4 | AK058336: | 117 | 6e-27 | 5 | AK107155:Os07g0659800 | 113 | 9e-26 | 6 | AK119901:Os02g0128800 | 108 | 3e-24 | 7 | AK111954:Os02g0128800 | 108 | 3e-24 | 8 | AK111795:Os02g0128800 | 108 | 3e-24 | 9 | AK104468:Os02g0128800 | 108 | 3e-24 | 10 | Os10g0155400:Os10g0155400 | 30 | 1.3 | 11 | AB004461:Os01g0868300 | 29 | 2.2 | 12 | AK121506:Os08g0564300 | 28 | 4.9 | 13 | AK106260:Os08g0564300 | 28 | 4.9 | 14 | AK071642:Os11g0280500 | 28 | 4.9 | 15 | AK109803:Os04g0433000 | 28 | 5.0 | 16 | AK111239:Os12g0455000 | 28 | 6.5 | 17 | AK106202:Os04g0460300 | 28 | 6.5 | 18 | Os03g0840400:Os03g0840400 | 27 | 8.5 | 19 | Os03g0346700:Os03g0346700 | 27 | 8.5 | 20 | AK110595: | 27 | 8.5 | 21 | AK106154:Os02g0653900 | 27 | 8.5 | 22 | AK104793:Os02g0653900 | 27 | 8.5 | 23 | AK098925:Os02g0653900 | 27 | 8.5 | 24 | AK064950:Os02g0653900 | 27 | 8.5 | 25 | AK058543:Os09g0338500 | 27 | 8.5 |
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>AK072985:Os02g0293400 | Length = 349 Score = 156 bits (395), Expect = 9e-39 Identities = 74/74 (100%), Positives = 74/74 (100%) Frame = +3 Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ Sbjct: 276 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 335 Query: 183 QNPDSGACIPNLFS 224 QNPDSGACIPNLFS Sbjct: 336 QNPDSGACIPNLFS 349
>AK120816:Os01g0234900 | Length = 347 Score = 142 bits (359), Expect = 1e-34 Identities = 67/74 (90%), Positives = 71/74 (95%) Frame = +3 Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182 GANGRKM+WEGTPRS+RDSHRKVRDSHDGLIIQRNMALFFSGG+RKELKLR+TGRIWKEQ Sbjct: 275 GANGRKMVWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRITGRIWKEQ 334 Query: 183 QNPDSGACIPNLFS 224 Q PD GACIPNL S Sbjct: 335 QTPD-GACIPNLCS 347
>Os05g0238200:Os05g0238200 | Length = 361 Score = 142 bits (357), Expect = 2e-34 Identities = 68/74 (91%), Positives = 70/74 (94%) Frame = +3 Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182 G NGRKM+WEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG+RKELKLRVTGRIWKEQ Sbjct: 289 GGNGRKMVWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 348 Query: 183 QNPDSGACIPNLFS 224 NPD GACIPNL S Sbjct: 349 TNPD-GACIPNLCS 361
>AK058336: | Length = 301 Score = 117 bits (293), Expect = 6e-27 Identities = 55/60 (91%), Positives = 57/60 (95%) Frame = +3 Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182 G GRKMIW+G PRSIRDSHRKVRDS+DGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ Sbjct: 242 GGTGRKMIWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 301
>AK107155:Os07g0659800 | Length = 302 Score = 113 bits (283), Expect = 9e-26 Identities = 52/60 (86%), Positives = 57/60 (95%) Frame = +3 Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182 G +GRKM W+G PRSIRDSHRKVRDS+DGLIIQRNMALFFSGG++KELKLRVTGRIWKEQ Sbjct: 243 GGSGRKMTWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQ 302
>AK119901:Os02g0128800 | Length = 308 Score = 108 bits (270), Expect = 3e-24 Identities = 50/60 (83%), Positives = 54/60 (90%) Frame = +3 Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182 G NGRK+ W+G PRSIRDSH+KVRDS DGLII RNMALFFSGG R+ELKLRVTGRIWKEQ Sbjct: 249 GGNGRKLTWQGIPRSIRDSHKKVRDSFDGLIIHRNMALFFSGGNRQELKLRVTGRIWKEQ 308
>AK111954:Os02g0128800 | Length = 229 Score = 108 bits (270), Expect = 3e-24 Identities = 50/60 (83%), Positives = 54/60 (90%) Frame = +3 Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182 G NGRK+ W+G PRSIRDSH+KVRDS DGLII RNMALFFSGG R+ELKLRVTGRIWKEQ Sbjct: 170 GGNGRKLTWQGIPRSIRDSHKKVRDSFDGLIIHRNMALFFSGGNRQELKLRVTGRIWKEQ 229
>AK111795:Os02g0128800 | Length = 308 Score = 108 bits (270), Expect = 3e-24 Identities = 50/60 (83%), Positives = 54/60 (90%) Frame = +3 Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182 G NGRK+ W+G PRSIRDSH+KVRDS DGLII RNMALFFSGG R+ELKLRVTGRIWKEQ Sbjct: 249 GGNGRKLTWQGIPRSIRDSHKKVRDSFDGLIIHRNMALFFSGGNRQELKLRVTGRIWKEQ 308
>AK104468:Os02g0128800 | Length = 308 Score = 108 bits (270), Expect = 3e-24 Identities = 50/60 (83%), Positives = 54/60 (90%) Frame = +3 Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182 G NGRK+ W+G PRSIRDSH+KVRDS DGLII RNMALFFSGG R+ELKLRVTGRIWKEQ Sbjct: 249 GGNGRKLTWQGIPRSIRDSHKKVRDSFDGLIIHRNMALFFSGGNRQELKLRVTGRIWKEQ 308
>Os10g0155400:Os10g0155400 | Length = 547 Score = 30.0 bits (66), Expect = 1.3 Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 5/39 (12%) Frame = -2 Query: 579 GVCKKCFKQFPSGCMFQ-----TTRIQSYITRSLKYNDM 478 G+ +K F +FPSG + Q T+ +QSY SLK N++ Sbjct: 306 GILRKDFFRFPSGSVQQKMTMTTSTVQSYAYSSLKMNEI 344
>AB004461:Os01g0868300 | Length = 1244 Score = 29.3 bits (64), Expect = 2.2 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%) Frame = -2 Query: 84 RGCHALCGDCPGCSGA--CPPISS 19 RGC L CP CS CPP+SS Sbjct: 1041 RGCEPLRLSCPSCSTTFDCPPVSS 1064
>AK121506:Os08g0564300 | Length = 1344 Score = 28.1 bits (61), Expect = 4.9 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = -3 Query: 188 VLLLLPDAASHPQFQLFPLPAGEEECHVPLDYEXXXXXXXXXXXVPDAPGRALP 27 V++L DAA+ P+ + F LP+ ++ H L + PDAP A P Sbjct: 9 VVVLGADAAADPELEAFHLPSADQPPHSHLLHH---HHSPQSHPQPDAPAAAAP 59
>AK106260:Os08g0564300 | Length = 415 Score = 28.1 bits (61), Expect = 4.9 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = -3 Query: 188 VLLLLPDAASHPQFQLFPLPAGEEECHVPLDYEXXXXXXXXXXXVPDAPGRALP 27 V++L DAA+ P+ + F LP+ ++ H L + PDAP A P Sbjct: 9 VVVLGADAAADPELEAFHLPSADQPPHSHLLHH---HHSPQSHPQPDAPAAAAP 59
>AK071642:Os11g0280500 | Length = 136 Score = 28.1 bits (61), Expect = 4.9 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = +3 Query: 372 GWLVLLSRTAREACWKSHGDHSPLTGLCSVIPKCLSCHC 488 GW R AR ACWK H LC + P CHC Sbjct: 34 GW-----RAARSACWKCHH-----CRLCLMRPWEPRCHC 62
>AK109803:Os04g0433000 | Length = 344 Score = 28.1 bits (61), Expect = 5.0 Identities = 19/69 (27%), Positives = 26/69 (37%), Gaps = 1/69 (1%) Frame = +2 Query: 5 CQWQEDDMGGHAPEHPGQSPQSA*QPRRPHNPAEHGTLLLRRGEERAETA-GDWPHLEGA 181 C++ + G PG+ P +P R H A+ G R A A G P + A Sbjct: 115 CEFHPEGRAGEIGVSPGRLPHDRVRPHRLHGAADGGHRRRHRNAAAAAAAYGGGPTVGPA 174 Query: 182 AEPRLGSLH 208 PR H Sbjct: 175 PAPRRPPRH 183
>AK111239:Os12g0455000 | Length = 91 Score = 27.7 bits (60), Expect = 6.5 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 2/24 (8%) Frame = -2 Query: 78 CHALC-GDCPGCSGAC-PPISSSC 13 C++ C G GCSGAC P SSSC Sbjct: 42 CNSSCAGGMGGCSGACTDPASSSC 65
>AK106202:Os04g0460300 | Length = 455 Score = 27.7 bits (60), Expect = 6.5 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +1 Query: 283 LPICFSLFTVCVCAFSLFQPLCCNM 357 LP L+T C C ++F LC +M Sbjct: 253 LPTALGLYTFCYCGHAIFPTLCNSM 277
>Os03g0840400:Os03g0840400 | Length = 218 Score = 27.3 bits (59), Expect = 8.5 Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = -2 Query: 543 GCMFQTTRIQSYITRSLKYNDMTDI*ESQNTGQSEENDHHVI--SSRLHVLSLITTPTTP 370 GC+ QT + + ++ DM D Q+ ++ ++HV+ +++L+ S + T Sbjct: 8 GCLDQTGTFRGNRLSTSQFGDMDDEYNEQDNWDNDRTENHVVENTTKLNYHSYMNRQTRA 67 Query: 369 KNTEHVTTKW 340 K ++ T K+ Sbjct: 68 KWSKSETDKF 77
>Os03g0346700:Os03g0346700 | Length = 949 Score = 27.3 bits (59), Expect = 8.5 Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 5/72 (6%) Frame = -2 Query: 549 PSGCMFQTTRIQSYITRSLKYNDMTDI*ESQNTGQSEE---NDHHVISSRLHV--LSLIT 385 P+GC FQ +QS + +L + + ES Q NDH L + +SL Sbjct: 842 PAGCPFQVKNLQSTVQLALDFLSPESLGESARMAQEIRCLPNDHDAKLKMLEIGKISLYA 901 Query: 384 TPTTPKNTEHVT 349 + + + +T Sbjct: 902 ASSAVREIQRIT 913
>AK110595: | Length = 196 Score = 27.3 bits (59), Expect = 8.5 Identities = 21/65 (32%), Positives = 28/65 (43%) Frame = +2 Query: 14 QEDDMGGHAPEHPGQSPQSA*QPRRPHNPAEHGTLLLRRGEERAETAGDWPHLEGAAEPR 193 ++DD+G AP+H G P + R G L L G E GD H+ A + R Sbjct: 95 RDDDVGVGAPQHVGTGPSADGDRRHLDGGQARGALGL--GLEPDAGRGD-RHVPLATQAR 151 Query: 194 LGSLH 208 G H Sbjct: 152 CGGAH 156
>AK106154:Os02g0653900 | Length = 544 Score = 27.3 bits (59), Expect = 8.5 Identities = 13/42 (30%), Positives = 17/42 (40%) Frame = +2 Query: 32 GHAPEHPGQSPQSA*QPRRPHNPAEHGTLLLRRGEERAETAG 157 G P H +PQ PRR +P + +R E AG Sbjct: 19 GVVPRHASPTPQQRAAPRREQSPLNPSSQSIRSASSGTELAG 60
>AK104793:Os02g0653900 | Length = 544 Score = 27.3 bits (59), Expect = 8.5 Identities = 13/42 (30%), Positives = 17/42 (40%) Frame = +2 Query: 32 GHAPEHPGQSPQSA*QPRRPHNPAEHGTLLLRRGEERAETAG 157 G P H +PQ PRR +P + +R E AG Sbjct: 19 GVVPRHASPTPQQRAAPRREQSPLNPSSQSIRSASSGTELAG 60
>AK098925:Os02g0653900 | Length = 544 Score = 27.3 bits (59), Expect = 8.5 Identities = 13/42 (30%), Positives = 17/42 (40%) Frame = +2 Query: 32 GHAPEHPGQSPQSA*QPRRPHNPAEHGTLLLRRGEERAETAG 157 G P H +PQ PRR +P + +R E AG Sbjct: 19 GVVPRHASPTPQQRAAPRREQSPLNPSSQSIRSASSGTELAG 60
>AK064950:Os02g0653900 | Length = 544 Score = 27.3 bits (59), Expect = 8.5 Identities = 13/42 (30%), Positives = 17/42 (40%) Frame = +2 Query: 32 GHAPEHPGQSPQSA*QPRRPHNPAEHGTLLLRRGEERAETAG 157 G P H +PQ PRR +P + +R E AG Sbjct: 19 GVVPRHASPTPQQRAAPRREQSPLNPSSQSIRSASSGTELAG 60
>AK058543:Os09g0338500 | Length = 466 Score = 27.3 bits (59), Expect = 8.5 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Frame = +1 Query: 259 QVYIEEM*LPICFSLFTVCVCAFSLFQPLCCNMLSILW--GGWCCYQGQHVKPAGN 420 +V + M L +C +L+ V CA + L ++ +W GW + H + G+ Sbjct: 132 KVQVAGMLLLLCAALYCVLACASAWAHLLAGGLIGFIWIQSGWMGHDSGHHRITGH 187 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 17,213,896 Number of extensions: 377981 Number of successful extensions: 1087 Number of sequences better than 10.0: 25 Number of HSP's gapped: 1081 Number of HSP's successfully gapped: 25 Length of query: 208 Length of database: 15,399,855 Length adjustment: 96 Effective length of query: 112 Effective length of database: 11,555,919 Effective search space: 1294262928 Effective search space used: 1294262928 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
