>LOC_Os02g19140:12002.t01707:unspliced-genomic ubiquitin ligase SINAT4, putative, expressed|
Length = 4297
Score = 187 bits (402), Expect = 8e-47
Identities = 76/77 (98%), Positives = 77/77 (100%)
Frame = +3 / +1
Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182
GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ
Sbjct: 3448 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 3627
Query: 183 QNPDSGACIPNLFS*SE 233
QNPDSGACIPNLFS*+E
Sbjct: 3628 QNPDSGACIPNLFS*TE 3678
Score = 95.0 bits (201), Expect(2) = 3e-27
Identities = 38/47 (80%), Positives = 42/47 (89%)
Frame = -1 / -3
Query: 232 SLQLKRLGMQAPESGFCCSFQMRPVTRSFSSFLSPPEKKSAMFRWIM 92
S+QL R GMQAPESGFCCSFQ+RPVTR+F+SFLSPPEK AMFR IM
Sbjct: 3677 SVQLNRFGMQAPESGFCCSFQIRPVTRNFNSFLSPPEKNRAMFR*IM 3537
Score = 46.4 bits (95), Expect(2) = 3e-27
Identities = 19/29 (65%), Positives = 19/29 (65%)
Frame = -2 / -1
Query: 96 L*GRRGCHALCGDCPGCSGACPPISSSCH 10
L*GR GC G CP C G CPPISSS H
Sbjct: 3541 L*GRHGCP*PSGGCPLCCGECPPISSSGH 3455
Score = 112 bits (240), Expect = 2e-24
Identities = 47/75 (62%), Positives = 55/75 (73%)
Frame = +2 / +3
Query: 8 QWQEDDMGGHAPEHPGQSPQSA*QPRRPHNPAEHGTLLLRRGEERAETAGDWPHLEGAAE 187
+W EDDMGGH+P+H GQ P+ QP RPHN AEHG++LLRR EER E AG P+LEG AE
Sbjct: 3453 EWPEDDMGGHSPQHKGQPPEG*GQP*RPHNSAEHGSVLLRRREERVEIAGHRPNLEGTAE 3632
Query: 188 PRLGSLHP*SLQLK* 232
LGSLH +QL *
Sbjct: 3633 S*LGSLHSKPIQLN* 3677
Score = 95.9 bits (203), Expect = 2e-19
Identities = 44/74 (59%), Positives = 51/74 (68%)
Frame = -3 / -2
Query: 230 TSAEEIRDAGSRVGVLLLLPDAASHPQFQLFPLPAGEEECHVPLDYEXXXXXXXXXXXVP 51
+SAE + +AGSRV +LL LPD+A PQFQLFPL A EE+ HVPL+YE VP
Sbjct: 3675 SSAE*VWNAGSRVRILLFLPDSAGDPQFQLFPLSA*EEQSHVPLNYEAVMAVPNLPVAVP 3496
Query: 50 DAPGRALPYHLPAI 9
A G ALPYHLPAI
Sbjct: 3495 YAAGSALPYHLPAI 3454
Score = 45.1 bits (92), Expect = 5e-04
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +1 / +2
Query: 133 RGKS*NCG*LAASGRSSRTPTREPASLISSAEV 231
RGKS*NCG A SGR+SR TREPA SAE+
Sbjct: 3578 RGKS*NCGSPAESGRNSRILTREPAFQTYSAEL 3676
Score = 29.9 bits (59), Expect(2) = 0.003
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -2 / -1
Query: 228 FS*RD*GCRLPSRGSAAPSRCGQ 160
FS* CRLPS+ SA PSR G+
Sbjct: 3673 FS*IGLECRLPSQDSAVPSRFGR 3605
Score = 29.9 bits (59), Expect(2) = 0.003
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 40 GVPSHIIFLPLAP 2
GVPSHIIF P AP
Sbjct: 3485 GVPSHIIFRPFAP 3447
>LOC_Os01g13370:12001.t01199:unspliced-genomic ubiquitin ligase SINAT3, putative, expressed|
Length = 2846
Score = 153 bits (329), Expect(2) = 2e-38
Identities = 59/64 (92%), Positives = 63/64 (98%)
Frame = +3 / +3
Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182
GANGRKM+WEGTPRS+RDSHRKVRDSHDGLIIQRNMALFFSGG+RKELKLR+TGRIWKEQ
Sbjct: 2319 GANGRKMVWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRITGRIWKEQ 2498
Query: 183 QNPD 194
Q PD
Sbjct: 2499 QTPD 2510
Score = 25.8 bits (50), Expect(2) = 2e-38
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3 / +3
Query: 177 EQQNPDSGACIPNLFS*S 230
++Q GACIPNL S*+
Sbjct: 2490 KEQQTPDGACIPNLCS*A 2543
Score = 67.0 bits (140), Expect(2) = 8e-18
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = -1 / -2
Query: 193 SGFCCSFQMRPVTRSFSSFLSPPEKKSAMFRWIM 92
SG CCSFQ+RPV SFSSF SPPEK SAMF W+M
Sbjct: 2509 SGVCCSFQIRPVILSFSSFRSPPEKNSAMFLWMM 2408
Score = 42.8 bits (87), Expect(2) = 8e-18
Identities = 17/29 (58%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 99 GL*GRRGCHALCGDCPGCSGACPPISSSC 13
G *G GC A G CPG G CPPI SC
Sbjct: 2415 G**GHHGCPAPSGGCPGHFGGCPPIPFSC 2329
Score = 75.3 bits (158), Expect = 4e-13
Identities = 32/60 (53%), Positives = 39/60 (65%)
Frame = +2 / +2
Query: 14 QEDDMGGHAPEHPGQSPQSA*QPRRPHNPAEHGTLLLRRGEERAETAGDWPHLEGAAEPR 193
QE+ MGGH P+ PGQ P+ A QP PH+P EHG +LL + AE P LEGAA+PR
Sbjct: 2330 QENGMGGHPPKCPGQPPEGAGQP*WPHHPEEHGAVLLGGRPKGAEAEDHRPDLEGAADPR 2509
Score = 65.2 bits (136), Expect = 4e-10
Identities = 30/59 (50%), Positives = 33/59 (55%)
Frame = -3 / -1
Query: 185 LLLLPDAASHPQFQLFPLPAGEEECHVPLDYEXXXXXXXXXXXVPDAPGRALPYHLPAI 9
LLLLPD A PQ QL + EE+ HVPLD E VPD G ALPYH PA+
Sbjct: 2501 LLLLPDPAGDPQLQLLSVAPREEQRHVPLDDEAIMAVPHLPVAVPDTSGGALPYHFPAV 2325
>LOC_Os05g14860:12005.t01260:unspliced-genomic ubiquitin ligase SINAT3, putative, expressed|
Length = 5288
Score = 152 bits (327), Expect(2) = 6e-38
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +3 / +2
Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182
G NGRKM+WEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG+RKELKLRVTGRIWKEQ
Sbjct: 4829 GGNGRKMVWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 5008
Query: 183 QNPD 194
NPD
Sbjct: 5009 TNPD 5020
Score = 24.9 bits (48), Expect(2) = 6e-38
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3 / +2
Query: 177 EQQNPDSGACIPNLFS* 227
++Q GACIPNL S*
Sbjct: 5000 KEQTNPDGACIPNLCS* 5050
Score = 73.5 bits (154), Expect(2) = 2e-21
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = -1 / -3
Query: 193 SGFCCSFQMRPVTRSFSSFLSPPEKKSAMFRWIM 92
SGF CSFQ+RPVT SFSSFLSPPEKKSAMF W+M
Sbjct: 5019 SGFVCSFQIRPVTLSFSSFLSPPEKKSAMFLWMM 4918
Score = 48.7 bits (100), Expect(2) = 2e-21
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = -2 / -1
Query: 99 GL*GRRGCHALCGDCPGCSGACPPISSSCHWH 4
G *GR GC A G C GCS C P SSCH+H
Sbjct: 4925 G**GRHGCPAPSGGCRGCS*GCLPTPSSCHYH 4830
Score = 90.9 bits (192), Expect = 7e-18
Identities = 38/63 (60%), Positives = 43/63 (68%)
Frame = +2 / +1
Query: 11 WQEDDMGGHAPEHPGQSPQSA*QPRRPHNPAEHGTLLLRRGEERAETAGDWPHLEGAAEP 190
WQED +G H EHP Q P+ A QP RPH+P EHGTLLLRR +E AE GD P+LE EP
Sbjct: 4837 WQEDGVGRHP*EHPRQPPEGAGQP*RPHHPEEHGTLLLRR*QEGAEAEGDRPYLERTDEP 5016
Query: 191 RLG 199
G
Sbjct: 5017 GWG 5025
Score = 81.3 bits (171), Expect = 6e-15
Identities = 38/80 (47%), Positives = 43/80 (53%)
Frame = -3 / -2
Query: 242 CQLLTSAEEIRDAGSRVGVLLLLPDAASHPQFQLFPLPAGEEECHVPLDYEXXXXXXXXX 63
C+ L S+ + V L PD A HPQ QL P+ AGEEECHVPLD E
Sbjct: 5068 CRTLCSSATKVRYAGPIRVRLFFPDTAGHPQLQLLPVTAGEEECHVPLDDEAVMAVPHLP 4889
Query: 62 XXVPDAPGRALPYHLPAIGT 3
V DAP A P+HLPAI T
Sbjct: 4888 VAVADAPRGAFPHHLPAITT 4829
>LOC_Os03g24040:12003.t02099:unspliced-genomic ubiquitin ligase SINAT4, putative, expressed|
Length = 3763
Score = 137 bits (293), Expect = 9e-32
Identities = 55/60 (91%), Positives = 57/60 (95%)
Frame = +3 / +3
Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182
G GRKMIW+G PRSIRDSHRKVRDS+DGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ
Sbjct: 3219 GGTGRKMIWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 3398
Score = 61.1 bits (127), Expect = 7e-09
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = -1 / -1
Query: 187 FCCSFQMRPVTRSFSSFLSPPEKKSAMFRWIM 92
F CSFQ+ PVTR+ SSFLSPPEK AMFRW++
Sbjct: 3403 FHCSFQILPVTRNLSSFLSPPEKNKAMFRWMI 3308
Score = 53.8 bits (111), Expect = 1e-06
Identities = 25/57 (43%), Positives = 30/57 (52%)
Frame = -3 / -3
Query: 182 LLLPDAASHPQFQLFPLPAGEEECHVPLDYEXXXXXXXXXXXVPDAPGRALPYHLPA 12
L LP++ S PQF+L P EE+ HVPLD + V DAPG LP H A
Sbjct: 3398 LFLPNSPSDPQFELLPFSTREEQGHVPLDDKPIIAIPDLPMAVSDAPGNPLPDHFAA 3228
Score = 36.8 bits (74), Expect = 0.14
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2 / +2
Query: 92 HNPAEHGTLLLRRGEERAETAGDWPHLEGAAE 187
++P EHG +LL +E A+ AG W +LEG +
Sbjct: 3308 YHPTEHGLVLLWWRKEGAQIAGHWENLEGTVK 3403
>LOC_Os07g46560:12007.t04292:unspliced-genomic ubiquitin ligase SINAT5, putative, expressed|
Length = 3804
Score = 132 bits (283), Expect = 2e-30
Identities = 52/60 (86%), Positives = 57/60 (95%)
Frame = +3 / +3
Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182
G +GRKM W+G PRSIRDSHRKVRDS+DGLIIQRNMALFFSGG++KELKLRVTGRIWKEQ
Sbjct: 3177 GGSGRKMTWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGDKKELKLRVTGRIWKEQ 3356
Score = 70.3 bits (147), Expect = 1e-11
Identities = 30/65 (46%), Positives = 41/65 (63%)
Frame = +2 / +2
Query: 8 QWQEDDMGGHAPEHPGQSPQSA*QPRRPHNPAEHGTLLLRRGEERAETAGDWPHLEGAAE 187
QW EDD+ P+H QS +S+ Q RRP++PAEHG +LLR +E A+TA LEGA
Sbjct: 3182 QWSEDDLARRPPKHQRQSQESSGQLRRPYHPAEHGLVLLRWRQEGAQTACHRKDLEGAVN 3361
Query: 188 PRLGS 202
+ +
Sbjct: 3362 HNISN 3376
Score = 61.1 bits (127), Expect(2) = 2e-11
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -1 / -3
Query: 181 CSFQMRPVTRSFSSFLSPPEKKSAMFRWIM 92
CSFQ+ PVTRS SSFLSPPEK AMFRW++
Sbjct: 3355 CSFQILPVTRSLSSFLSPPEKNKAMFRWMI 3266
Score = 27.2 bits (53), Expect(2) = 2e-11
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -2 / -1
Query: 99 GL*GRRGCHALCGDCPGCSGACPPISSSCH 10
G *GRR C L DC C G SSS H
Sbjct: 3273 G**GRRSCPELSCDCL*CFGGRLARSSSDH 3184
Score = 51.0 bits (105), Expect = 7e-06
Identities = 25/56 (44%), Positives = 31/56 (55%)
Frame = -3 / -2
Query: 182 LLLPDAASHPQFQLFPLPAGEEECHVPLDYEXXXXXXXXXXXVPDAPGRALPYHLP 15
LLLP+ + QF+L + GEE+ HVPLD + V DA G ALP HLP
Sbjct: 3356 LLLPNPSGDTQFELLLVATGEEQGHVPLDDKAVVAVPNFPVTVSDASGDALPGHLP 3189
>LOC_Os02g03620:12002.t00262:unspliced-genomic ubiquitin ligase SINAT2, putative, expressed|
Length = 3875
Score = 126 bits (270), Expect = 1e-28
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +3 / +1
Query: 3 GANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 182
G NGRK+ W+G PRSIRDSH+KVRDS DGLII RNMALFFSGG R+ELKLRVTGRIWKEQ
Sbjct: 3421 GGNGRKLTWQGIPRSIRDSHKKVRDSFDGLIIHRNMALFFSGGNRQELKLRVTGRIWKEQ 3600
Score = 63.4 bits (132), Expect(2) = 2e-15
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -1 / -1
Query: 181 CSFQMRPVTRSFSSFLSPPEKKSAMFRWIM 92
CSFQMRPVTRS SS L PPEKK AMFRW+M
Sbjct: 3599 CSFQMRPVTRSLSSCLLPPEKKRAMFRWMM 3510
Score = 38.6 bits (78), Expect(2) = 2e-15
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2 / -2
Query: 99 GL*GRRGCHALCGDCPGCSGACPPISSSCHWHP 1
G *GRR C CP CSG CP +S+S P
Sbjct: 3517 G**GRRSCPGPSCGCP*CSGGCPAMSASARSRP 3419
Score = 79.9 bits (168), Expect = 2e-14
Identities = 34/60 (56%), Positives = 39/60 (65%)
Frame = +2 / +3
Query: 2 GCQWQEDDMGGHAPEHPGQSPQSA*QPRRPHNPAEHGTLLLRRGEERAETAGDWPHLEGA 181
G + E DM GH PEH GQ + Q RRPH+P EHG LLLRR + A+ AG PHLEGA
Sbjct: 3420 GRERAEADMAGHPPEHQGQPQEGPGQLRRPHHPPEHGPLLLRRQQAGAQAAGYRPHLEGA 3599
Score = 72.5 bits (152), Expect = 2e-12
Identities = 34/77 (44%), Positives = 43/77 (55%)
Frame = -3 / -3
Query: 239 QLLTSAEEIRDAGSRVGVLLLLPDAASHPQFQLFPLPAGEEECHVPLDYEXXXXXXXXXX 60
++L A + + LLLPDAA +PQ +L P+ AGEEE HVP+D E
Sbjct: 3657 EILAFAISLSSTAAASFTSLLLPDAAGNPQLELLPVAAGEEEGHVPVDDEAVEAVPDLLV 3478
Query: 59 XVPDAPGRALPYHLPAI 9
VPDAPG ALP LP +
Sbjct: 3477 AVPDAPGDALPCQLPPV 3427
>LOC_Os01g24400:12001.t02161:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 4975
Score = 29.0 bits (57), Expect(3) = 0.83
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3 / +1
Query: 54 DSHRKVRDSHDGLIIQRNMALFFSGGERKEL 146
DSH +R +HDG I+ R + GG++ +
Sbjct: 1636 DSHYMLRKTHDGSIVARYVGSPILGGKKNAI 1728
Score = 23.5 bits (45), Expect(3) = 0.83
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = +1 / +2
Query: 301 LFTVCVCAFSLFQPLCCNMLSI 366
+F+VC+CA P C+++++
Sbjct: 4361 MFSVCMCARFQAAPKGCHLVAV 4426
Score = 22.6 bits (43), Expect(3) = 0.83
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3 / +1
Query: 375 WLVLLSRTAREACW 416
WLVL R +ACW
Sbjct: 4465 WLVLPKRC*VQACW 4506
>LOC_Os05g08694:12005.t00747:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 8023
Score = 29.0 bits (57), Expect(3) = 1.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3 / +2
Query: 54 DSHRKVRDSHDGLIIQRNMALFFSGGERKEL 146
DSH +R +HDG I+ R + GG++ +
Sbjct: 1625 DSHYMLRKAHDGSIVARYVGSPILGGKKNAI 1717
Score = 23.1 bits (44), Expect(3) = 1.8
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = +1 / +3
Query: 301 LFTVCVCAFSLFQPLCCNMLSI 366
+F+VC+CA P C+++++
Sbjct: 4329 MFSVCMCARFQAAPKECHLVAV 4394
Score = 23.1 bits (44), Expect(3) = 1.8
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +3 / +2
Query: 393 RTAREACWKSHGDHSPLTGLCS 458
R+AR HG + LTG+C+
Sbjct: 6287 RSARSHRRSDHGSAAVLTGVCA 6352
>LOC_Os04g13364:12004.t01157:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class, expressed|
Length = 12290
Score = 32.7 bits (65), Expect = 2.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1 / +2
Query: 265 YIEEM*LPICFSLFTVCVCAFSLFQPLCCN 354
Y+E *L C S +C C S F PL C+
Sbjct: 3611 YLEIF*LRCCLSHPLICKCNISFFHPLICH 3700
>LOC_Os07g38430:12007.t03508:unspliced-genomic expressed protein|
Length = 2571
Score = 24.9 bits (48), Expect(3) = 2.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1 / +1
Query: 163 AASGRSSRTPTREPASLISSAEVSS 237
AAS S+RTP+ P S S+ SS
Sbjct: 595 AASAPSTRTPSPSPPSTSSATAPSS 669
Score = 24.9 bits (48), Expect(3) = 2.6
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +1 / +2
Query: 244 QDHVIQVYIEEM*LPICFSLFTVCV 318
+DH ++ +++ PIC+ L VC+
Sbjct: 1397 EDHFVKAVAQDLR*PICYMLN*VCL 1471
Score = 21.7 bits (41), Expect(3) = 2.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1 / +1
Query: 304 FTVCVCAFSLFQPLCC 351
+++C+ SL QPL C
Sbjct: 1741 YSLCIHTPSLLQPLYC 1788
>LOC_Os01g27550:12001.t02457:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 5170
Score = 29.0 bits (57), Expect(2) = 3.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3 / +1
Query: 54 DSHRKVRDSHDGLIIQRNMALFFSGGERKEL 146
DSH +R +HDG I+ R + GG++ +
Sbjct: 1834 DSHYMLRKAHDGSIVARYVGSPILGGKKNAI 1926
Score = 24.9 bits (48), Expect(2) = 3.6
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = +1 / +3
Query: 301 LFTVCVCAFSLFQPLCCNMLSI 366
+F+VC+CA+ P C+++++
Sbjct: 4557 MFSVCMCAWFQAAPKECHLVAV 4622
>LOC_Os06g48250:12006.t04511:unspliced-genomic cell Division Protein AAA ATPase family, putative, expressed|
Length = 1937
Score = 28.1 bits (55), Expect(2) = 3.7
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2 / +3
Query: 41 PEHPGQSPQSA*QPRRPHNP 100
P+ P SP PRRPH+P
Sbjct: 447 PQAPPSSPPRRLPPRRPHHP 506
Score = 24.4 bits (47), Expect(2) = 3.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2 / +3
Query: 80 PRRPHNPAEHGTLLLRRGEERA 145
P RPH P + LLL RA
Sbjct: 1356 PPRPHGPQDRARLLLAARAPRA 1421
>LOC_Os02g56020:12002.t05176:unspliced-genomic methyltransferase WBSCR22, putative, expressed|
Length = 3051
Score = 28.1 bits (55), Expect(2) = 4.1
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = +2 / +3
Query: 38 APEHPGQSPQSA*QPRRPHNPAEHGTLLLRRGEERAETAGDWPHLEGAAEPRLGS 202
A E P + + PR A H L RRGEER E + E AA G+
Sbjct: 195 AHEEPSRKA*CSGNPRGVAARAHH*PLRRRRGEERGEAEEEAAGREDAAAGGAGA 359
Score = 24.9 bits (48), Expect(2) = 4.1
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1 / +2
Query: 310 VCVCAFSLFQPLCCNMLSILW 372
VCVC +L LC + LW
Sbjct: 2312 VCVCVQNLSTNLCLQVALFLW 2374
>LOC_Os05g17540:12005.t01523:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 5172
Score = 30.4 bits (60), Expect(2) = 4.8
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3 / +3
Query: 54 DSHRKVRDSHDGLIIQRNMALFFSGGERKEL 146
DSH +R +HDG I+ R + GG++ ++
Sbjct: 1833 DSHYMLRKAHDGSIVPRYVGSPILGGKKNDI 1925
Score = 23.1 bits (44), Expect(2) = 4.8
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = +1 / +1
Query: 301 LFTVCVCAFSLFQPLCCNMLSI 366
+F+VC+CA P C+++++
Sbjct: 4558 MFSVCMCARFQAAPKECHLVAV 4623
>LOC_Os12g42400:12012.t03914:unspliced-genomic nuclear transcription factor Y subunit A-2, putative, expressed|
Length = 4424
Score = 24.4 bits (47), Expect(2) = 5.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2 / +2
Query: 269 LKKCDCLFAFLSLQFAFVP 325
L KC+ F FLSL ++ +P
Sbjct: 95 LMKCEWAFLFLSLLYSTLP 151
Score = 24.0 bits (46), Expect(2) = 5.7
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +3 / +3
Query: 441 LTGLCSVIPKCLSCHCT 491
L CSV C+ C CT
Sbjct: 177 LVSCCSVGDSCICCTCT 227
>LOC_Os04g26290:12004.t02336:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 5167
Score = 28.1 bits (55), Expect(2) = 6.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3 / +1
Query: 48 IRDSHRKVRDSHDGLIIQRNMALFFSGGERKEL 146
I DSH +R HDG I+ R + GG++ +
Sbjct: 1822 IFDSHYMLRKIHDGSIVARYVGSPILGGKKNAI 1920
Score = 24.9 bits (48), Expect(2) = 6.4
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = +1 / +2
Query: 301 LFTVCVCAFSLFQPLCCNMLSI 366
+F+VC+CA+ P C+++++
Sbjct: 4553 MFSVCMCAWFQAAPKECHLVAV 4618
>LOC_Os09g04610:12009.t00357:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
Length = 1921
Score = 25.4 bits (49), Expect(2) = 8.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1 / -3
Query: 172 GRSSRTPTREPASLISSAEVSSW 240
G +T +PA+ SSA +SW
Sbjct: 1226 GEGDQTAAAQPAAASSSASAASW 1158
Score = 22.6 bits (43), Expect(2) = 8.2
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +1 / -2
Query: 343 LCCNMLSILWGGW 381
+CC M +I+W W
Sbjct: 1173 ICCIMAAIIWV*W 1135
>LOC_Os12g12450:12012.t01114:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 5104
Score = 29.5 bits (58), Expect(2) = 8.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3 / +1
Query: 54 DSHRKVRDSHDGLIIQRNMALFFSGGER 137
DSH +R +HDG I+ R + GG++
Sbjct: 1834 DSHYMIRKAHDGSIVARYVGSPILGGKK 1917
Score = 23.1 bits (44), Expect(2) = 8.4
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = +1 / +2
Query: 301 LFTVCVCAFSLFQPLCCNMLSI 366
+F+VC+CA P C+++++
Sbjct: 4490 MFSVCMCARFQAAPKECHLVAV 4555
>LOC_Os05g13740:12005.t01152:unspliced-genomic retrotransposon protein, putative, unclassified|
Length = 3848
Score = 29.0 bits (57), Expect(2) = 8.9
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3 / +1
Query: 54 DSHRKVRDSHDGLIIQRNMALFFSGGERKEL 146
DSH +R +HDG I+ R + GG++ +
Sbjct: 517 DSHYMLRKAHDGSIVARYVGSPILGGKKNAI 609
Score = 23.1 bits (44), Expect(2) = 8.9
Identities = 7/22 (31%), Positives = 15/22 (68%)
Frame = +1 / +3
Query: 301 LFTVCVCAFSLFQPLCCNMLSI 366
+F+VC+CA P C+++++
Sbjct: 3234 MFSVCMCARFQAAPKECHLVAV 3299
>LOC_Os03g16824:12003.t01464:unspliced-genomic spotted leaf protein 11, putative, expressed|
Length = 5682
Score = 27.2 bits (53), Expect(2) = 9.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1 / -3
Query: 367 LWGGWCCYQGQHVKPAGNHM 426
L G +CC GQ PA NH+
Sbjct: 3949 LLGSFCCVFGQVSCPASNHL 3890
Score = 25.4 bits (49), Expect(2) = 9.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3 / -3
Query: 507 CMIVFSLFETCIHWGTA*NISCIHLI 584
C +VFS I+WG+ IS +H I
Sbjct: 3697 CHVVFSRKFCRIYWGSHFRISTLHKI 3620
>LOC_Os08g01180:12008.t00018:unspliced-genomic nicalin precursor, putative, expressed|
Length = 6084
Score = 24.4 bits (47), Expect(2) = 9.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3 / +1
Query: 330 AFSATLL*HAQYSLGWLVLLSRTAREACWKSHGD 431
A +++L + Y WL LLSRT R A + D
Sbjct: 4591 AENSSLAINPHYIQSWLDLLSRTPRVAPFLQKND 4692
Score = 23.1 bits (44), Expect(2) = 9.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 266 ILKKCDCLFAFLS 304
ILK CLFAFL+
Sbjct: 4471 ILKLTSCLFAFLN 4509
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 256,058,279
Number of extensions: 4269481
Number of successful extensions: 23628
Number of sequences better than 10.0: 77
Length of query: 208
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 160
Effective length of database: 52,912,542
Effective search space: 8466006720
Effective search space used: 8466006720
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)