ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf52j03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q97ZK9:SYV_SULSO Valyl-tRNA synthetase - Sulfolobus solfataricus 34 3.1
2P05467:YKP1_KLULA Uncharacterized killer plasmid pGKl-2 protein ... 33 9.0
3Q868T3:CCAPR_DROME Cardioacceleratory peptide receptor - Drosoph... 33 9.0

>Q97ZK9:SYV_SULSO Valyl-tRNA synthetase - Sulfolobus solfataricus|
          Length = 842
 Score = 34.3 bits (77), Expect = 3.1
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 8/60 (13%)
 Frame = +3

Query: 1884 KLIYVRACKERLDY--SYHL-DKYLFMDHSRNLAKC-----RYPPYLLLSRKYDYKWAII 2039
            +L+Y    K+RLD   S H+ DK++  +H + + K       Y  YL+L   Y+Y W I+
Sbjct: 630  RLVYPFIAKQRLDKPKSLHIVDKWILQEHKKFVTKAINAYENYDFYLVLQELYNYFWEIV 689



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>P05467:YKP1_KLULA Uncharacterized killer plasmid pGKl-2 protein 1 - Kluyveromyces|
           lactis (Yeast) (Candida sphaerica)
          Length = 224

 Score = 32.7 bits (73), Expect = 9.0
 Identities = 19/70 (27%), Positives = 32/70 (45%)
 Frame = +1

Query: 280 VSYLDLVALFACLRLYERLDRHSPRRERIKAAVWALTTLLTVMFTYKVAEVMPLAFKLVV 459
           +SY+D +A       Y+R D       RIK  +     L+ +MF+ +  +  P   K+  
Sbjct: 1   MSYIDYLAYTGNTTFYDRFDGDLTSEHRIKCIINGC--LINIMFSIRTIKEFPEEIKICQ 58

Query: 460 WAMAAATTCG 489
            A++   TCG
Sbjct: 59  AAVSKFLTCG 68



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>Q868T3:CCAPR_DROME Cardioacceleratory peptide receptor - Drosophila melanogaster|
           (Fruit fly)
          Length = 506

 Score = 32.7 bits (73), Expect = 9.0
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +2

Query: 647 ASGVRSGGKLLGPSCILAVALPFFAGLLSHVLL 745
           A GV +GG+ L P+ + AV L +F   +SHV+L
Sbjct: 40  AGGVAAGGESLTPTDVAAVNLTYFTPAISHVML 72


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 491,926,447
Number of extensions: 10791478
Number of successful extensions: 24306
Number of sequences better than 10.0: 3
Number of HSP's gapped: 24293
Number of HSP's successfully gapped: 3
Length of query: 983
Length of database: 100,686,439
Length adjustment: 123
Effective length of query: 860
Effective length of database: 66,948,154
Effective search space: 57575412440
Effective search space used: 57575412440
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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