| Clone Name | FLbaf58l21 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF092524.1|AF092524 Triticum aestivum manganese superoxide dismutase (SOD) mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 896 Score = 472 bits (238), Expect = e-129 Identities = 273/284 (96%), Gaps = 3/284 (1%) Strand = Plus / Plus Query: 53 ccatggcgctccgcacgttggccacgaagagaaccctaggcctggcgctcggcggcgcgc 112 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 1 ccatggcgctccgcacgttggccgcgaagaaaaccctaggcctggcgctcggcggcgcc- 59 Query: 113 ggaggggcgtggcgacgttcacgctccccgacctcccctacgactacggcgcgctggagc 172 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 60 --aggggcgtggcgacgttcacgctccccgacctcccctacgactacggtgcgctggagc 117 Query: 173 cggccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcg 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 cggccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcg 177 Query: 233 ccaactacaacaaggcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccg 292 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 178 cccactacaacaaggcgctcgagcagctcgacgccgccgtcagcaagggggacgcgtccg 237 Query: 293 gcgtcgtccacctccagagcgccatcaaattcaacggcggcggt 336 ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 238 ccgtcgtccacctccagagcgccatcaagttcaacggcggcggt 281
>gb|AY963808.1| Triticum aestivum putative S-locus receptor kinase gene, partial cds; and mitochondrial Mn-superoxide dismutase (MnSOD) gene, complete cds, nuclear gene encoding mitochondrial protein Length = 11304 Score = 416 bits (210), Expect = e-113 Identities = 229/234 (97%), Gaps = 1/234 (0%) Strand = Plus / Plus Query: 115 aggggcgtggcgacgttcacgctccccgacctcccctacgactacggcgcgctggagccg 174 ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 6406 aggggcgtggcgacgttcacgctccccgacctcccctacgacttcggtgcgctggagccg 6465 Query: 175 gccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgcc 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6466 gccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgcc 6525 Query: 235 aactacaacaaggcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccggc 294 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 6526 aactacaacaaggcgctcgagcagctcgacgccgccgtcagcaagggggacgcgtccgcc 6585 Query: 295 gtcgtccacctccagagcgccatcaaattcaacggcggcggtaaagaccctttc 348 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 6586 gtcgtccacctccagagcgccatcaaattcaacggcggcggt-aagaccctttc 6638 Score = 202 bits (102), Expect = 2e-48 Identities = 145/157 (92%), Gaps = 3/157 (1%) Strand = Plus / Plus Query: 952 agttgatgtggagttattgcgtttgtttgttaatactgatctatgaggaagagtgttgtg 1011 |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| || Sbjct: 7310 agttgatgtggagttattgcgtttgtttattaatactgatctatgatgaagagtgttatg 7369 Query: 1012 ctcccagagtgtagtattatttggtgcttttaggatcatatcatttctaggtttttagat 1071 ||||| |||||||||||| ||||||||||||||||| ||||||||||||| |||||||| Sbjct: 7370 ctccc-gagtgtagtattggttggtgcttttaggatcctatcatttctagggttttagat 7428 Query: 1072 ggtggggtttttct--taagtcgtggttttatgttaa 1106 |||||| ||||||| |||||| |||||||||||||| Sbjct: 7429 ggtgggttttttcttataagtcttggttttatgttaa 7465 Score = 127 bits (64), Expect = 1e-25 Identities = 120/136 (88%), Gaps = 2/136 (1%) Strand = Plus / Plus Query: 721 gataaccaagcagaatactactattcatgagtagca-ttatccttggcacatggtttcat 779 ||||||||||||||||||||| |||| | ||||||| ||||||||| ||||||||||||| Sbjct: 6977 gataaccaagcagaatactacaattctt-agtagcagttatccttgtcacatggtttcat 7035 Query: 780 gggcctttctgggcagctaactaagaatgaaatctgtcacatttggaggaaatatggttt 839 | ||||||| |||||| |||||||||| ||||||| ||| ||||||| ||| ||||||| Sbjct: 7036 gtgcctttccgggcagttaactaagaacgaaatctatcaaatttggacaaaaaatggttt 7095 Query: 840 tctaattcgagctgtc 855 | | |||||||||||| Sbjct: 7096 tgtcattcgagctgtc 7111 Score = 121 bits (61), Expect = 6e-24 Identities = 83/89 (93%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 27 cacaccagagaccaaa-acacaaccagccatggcgctccgcacgttggccacgaagagaa 85 ||||||| |||||||| |||| ||||||||||||||||||||| |||||| |||||| || Sbjct: 6302 cacaccaaagaccaaacacactaccagccatggcgctccgcacattggccgcgaagaaaa 6361 Query: 86 ccctaggcctggcgctcggcggcgcgcgg 114 ||||||||||||||||||||||||||||| Sbjct: 6362 ccctaggcctggcgctcggcggcgcgcgg 6390 Score = 105 bits (53), Expect = 4e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 641 cctctagctgctctccagcagcatctctgaaccttgtggtggtctgtagttctgttggcc 700 ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 6917 cctctagctgctccccagcagcatatctgaaccttgtggtggtctgtagttctgttgggc 6976 Query: 701 gataa 705 ||||| Sbjct: 6977 gataa 6981 Score = 89.7 bits (45), Expect = 2e-14 Identities = 51/53 (96%) Strand = Plus / Plus Query: 431 ttgatgcggggattagtgcgttatcaagtaccagacgagtatctgcagagtga 483 |||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 6718 ttgatgcggggattagtgcggtatcgagtaccagacgagtatctgcagagtga 6770 Score = 83.8 bits (42), Expect = 1e-12 Identities = 52/54 (96%), Gaps = 1/54 (1%) Strand = Plus / Plus Query: 564 attaatttctgtcttttctgaaacctcgctcaactcatcctatttcagcgattc 617 |||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 6853 attaatttctgtcttt-ctgaaacctcgctcaactcatcctatctcagcgattc 6905 Score = 81.8 bits (41), Expect = 6e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 869 gaccccttgctgcgcttctcgtgtggttcgtccagatgctgtgatcgctagtatggaggt 928 |||||| ||| ||||||||| ||||||||||| ||||||| ||||||||||||||| ||| Sbjct: 7222 gaccccctgccgcgcttctcctgtggttcgtctagatgctctgatcgctagtatggtggt 7281 Query: 929 gatgctgatgtcg 941 || || ||||||| Sbjct: 7282 gacgccgatgtcg 7294 Score = 63.9 bits (32), Expect = 1e-06 Identities = 44/48 (91%) Strand = Plus / Plus Query: 1140 gtgctgattcgtgttatctgaaatggttgctcctgagtgcataatttc 1187 |||||| |||||| |||||||| |||||||||||||||||| |||||| Sbjct: 7539 gtgctgcttcgtgatatctgaagtggttgctcctgagtgcaaaatttc 7586 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Plus Query: 377 ggatgctcccttagattcgttcggatgctcc 407 ||||||||||| ||||||||||||||||||| Sbjct: 6655 ggatgctccctgagattcgttcggatgctcc 6685 Score = 42.1 bits (21), Expect = 4.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 399 ggatgctcccttagattcattcgtattctcctttgat 435 ||||||||||| |||||| |||| || |||||||||| Sbjct: 6655 ggatgctccctgagattcgttcggatgctcctttgat 6691
>gb|U72212.1|TAU72212 Triticum aestivum manganese superoxide dismutase (SOD3.1) mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 934 Score = 416 bits (210), Expect = e-113 Identities = 219/222 (98%) Strand = Plus / Plus Query: 115 aggggcgtggcgacgttcacgctccccgacctcccctacgactacggcgcgctggagccg 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 aggggcgtggcgacgttcacgctccccgacctcccctacgactacggcgcgctggagccg 156 Query: 175 gccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgcc 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 gccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgcc 216 Query: 235 aactacaacaaggcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccggc 294 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 217 aactacaacaaggcgctcgagcagctcgacgccgccgtcagcaagggggacgcgtccgcc 276 Query: 295 gtcgtccacctccagagcgccatcaaattcaacggcggcggt 336 |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 277 gtcgtccacctccagagcgccatcaagttcaacggcggcggt 318 Score = 107 bits (54), Expect = 1e-19 Identities = 60/62 (96%) Strand = Plus / Plus Query: 53 ccatggcgctccgcacgttggccacgaagagaaccctaggcctggcgctcggcggcgcgc 112 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 20 ccatggcgctccgcacgttggccgcgaagaaaaccctaggcctggcgctcggcggcgcgc 79 Query: 113 gg 114 || Sbjct: 80 gg 81
>gb|U73172.1|TAU73172 Triticum aestivum manganese superoxide dismutase (SOD3.2) mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 891 Score = 408 bits (206), Expect = e-110 Identities = 218/222 (98%) Strand = Plus / Plus Query: 115 aggggcgtggcgacgttcacgctccccgacctcccctacgactacggcgcgctggagccg 174 ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct: 86 aggggcgtggcgacgttcacgctccccgacctcccctacgacttcggtgcgctggagccg 145 Query: 175 gccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgcc 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 gccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgcc 205 Query: 235 aactacaacaaggcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccggc 294 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 206 aactacaacaaggcgctcgagcagctcgacgccgccgtcagcaagggggacgcgtccgcc 265 Query: 295 gtcgtccacctccagagcgccatcaaattcaacggcggcggt 336 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 gtcgtccacctccagagcgccatcaaattcaacggcggcggt 307 Score = 107 bits (54), Expect = 1e-19 Identities = 60/62 (96%) Strand = Plus / Plus Query: 53 ccatggcgctccgcacgttggccacgaagagaaccctaggcctggcgctcggcggcgcgc 112 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 9 ccatggcgctccgcacgttggccgcgaagaaaaccctaggcctggcgctcggcggcgcgc 68 Query: 113 gg 114 || Sbjct: 69 gg 70
>emb|CT833460.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA032I08, full insert sequence Length = 1111 Score = 299 bits (151), Expect = 1e-77 Identities = 187/199 (93%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 153 cgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatca 212 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 213 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcg 272 Query: 254 agcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccagagcg 313 ||||||||||||||||||||| |||||| ||||| ||| | |||| ||||||||||||| Sbjct: 273 agcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcg 332 Query: 314 ccatcaaattcaacggcgg 332 ||||||| ||||||||||| Sbjct: 333 ccatcaagttcaacggcgg 351 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 50 cagccatggcgctccgcacgttggccacgaagagaaccctag 91 |||||||||||||||||||| ||||| ||| || |||||||| Sbjct: 54 cagccatggcgctccgcacgctggcctcgaggaaaaccctag 95
>dbj|AK241211.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065122M10, full insert sequence Length = 2274 Score = 299 bits (151), Expect = 1e-77 Identities = 187/199 (93%) Strand = Plus / Minus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 1471 cgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatca 1412 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1411 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcg 1352 Query: 254 agcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccagagcg 313 ||||||||||||||||||||| |||||| ||||| ||| | |||| ||||||||||||| Sbjct: 1351 agcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcg 1292 Query: 314 ccatcaaattcaacggcgg 332 ||||||| ||||||||||| Sbjct: 1291 ccatcaagttcaacggcgg 1273 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Minus Query: 50 cagccatggcgctccgcacgttggccacgaagagaaccctag 91 |||||||||||||||||||| ||||| ||| || |||||||| Sbjct: 1569 cagccatggcgctccgcacgctggcctcgaggaaaaccctag 1528
>ref|NM_001061730.1| Oryza sativa (japonica cultivar-group) Os05g0323900 (Os05g0323900) mRNA, complete cds Length = 927 Score = 299 bits (151), Expect = 1e-77 Identities = 187/199 (93%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 156 cgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatca 215 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 216 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcg 275 Query: 254 agcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccagagcg 313 ||||||||||||||||||||| |||||| ||||| ||| | |||| ||||||||||||| Sbjct: 276 agcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcg 335 Query: 314 ccatcaaattcaacggcgg 332 ||||||| ||||||||||| Sbjct: 336 ccatcaagttcaacggcgg 354 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 50 cagccatggcgctccgcacgttggccacgaagagaaccctag 91 |||||||||||||||||||| ||||| ||| || |||||||| Sbjct: 57 cagccatggcgctccgcacgctggcctcgaggaaaaccctag 98
>gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0018A03, complete sequence Length = 146278 Score = 299 bits (151), Expect = 1e-77 Identities = 187/199 (93%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 64366 cgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatca 64425 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 64426 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcg 64485 Query: 254 agcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccagagcg 313 ||||||||||||||||||||| |||||| ||||| ||| | |||| ||||||||||||| Sbjct: 64486 agcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcg 64545 Query: 314 ccatcaaattcaacggcgg 332 ||||||| ||||||||||| Sbjct: 64546 ccatcaagttcaacggcgg 64564 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 50 cagccatggcgctccgcacgttggccacgaagagaaccctag 91 |||||||||||||||||||| ||||| ||| || |||||||| Sbjct: 64267 cagccatggcgctccgcacgctggcctcgaggaaaaccctag 64308
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 299 bits (151), Expect = 1e-77 Identities = 187/199 (93%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 14913450 cgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatca 14913509 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 14913510 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcg 14913569 Query: 254 agcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccagagcg 313 ||||||||||||||||||||| |||||| ||||| ||| | |||| ||||||||||||| Sbjct: 14913570 agcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcg 14913629 Query: 314 ccatcaaattcaacggcgg 332 ||||||| ||||||||||| Sbjct: 14913630 ccatcaagttcaacggcgg 14913648 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 50 cagccatggcgctccgcacgttggccacgaagagaaccctag 91 |||||||||||||||||||| ||||| ||| || |||||||| Sbjct: 14913351 cagccatggcgctccgcacgctggcctcgaggaaaaccctag 14913392
>dbj|AK119904.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-A05, full insert sequence Length = 901 Score = 299 bits (151), Expect = 1e-77 Identities = 187/199 (93%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 156 cgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatca 215 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 216 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcg 275 Query: 254 agcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccagagcg 313 ||||||||||||||||||||| |||||| ||||| ||| | |||| ||||||||||||| Sbjct: 276 agcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcg 335 Query: 314 ccatcaaattcaacggcgg 332 ||||||| ||||||||||| Sbjct: 336 ccatcaagttcaacggcgg 354 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 50 cagccatggcgctccgcacgttggccacgaagagaaccctag 91 |||||||||||||||||||| ||||| ||| || |||||||| Sbjct: 57 cagccatggcgctccgcacgctggcctcgaggaaaaccctag 98
>dbj|AK104160.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E09, full insert sequence Length = 901 Score = 299 bits (151), Expect = 1e-77 Identities = 187/199 (93%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 156 cgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatca 215 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 216 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcg 275 Query: 254 agcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccagagcg 313 ||||||||||||||||||||| |||||| ||||| ||| | |||| ||||||||||||| Sbjct: 276 agcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcg 335 Query: 314 ccatcaaattcaacggcgg 332 ||||||| ||||||||||| Sbjct: 336 ccatcaagttcaacggcgg 354 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 50 cagccatggcgctccgcacgttggccacgaagagaaccctag 91 |||||||||||||||||||| ||||| ||| || |||||||| Sbjct: 57 cagccatggcgctccgcacgctggcctcgaggaaaaccctag 98
>dbj|AK104030.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-C01, full insert sequence Length = 909 Score = 299 bits (151), Expect = 1e-77 Identities = 187/199 (93%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 154 cgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatca 213 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 214 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcg 273 Query: 254 agcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccagagcg 313 ||||||||||||||||||||| |||||| ||||| ||| | |||| ||||||||||||| Sbjct: 274 agcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcg 333 Query: 314 ccatcaaattcaacggcgg 332 ||||||| ||||||||||| Sbjct: 334 ccatcaagttcaacggcgg 352 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 50 cagccatggcgctccgcacgttggccacgaagagaaccctag 91 |||||||||||||||||||| ||||| ||| || |||||||| Sbjct: 55 cagccatggcgctccgcacgctggcctcgaggaaaaccctag 96
>dbj|AK070528.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060D13, full insert sequence Length = 928 Score = 299 bits (151), Expect = 1e-77 Identities = 187/199 (93%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 157 cgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatca 216 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 217 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcg 276 Query: 254 agcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccagagcg 313 ||||||||||||||||||||| |||||| ||||| ||| | |||| ||||||||||||| Sbjct: 277 agcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcg 336 Query: 314 ccatcaaattcaacggcgg 332 ||||||| ||||||||||| Sbjct: 337 ccatcaagttcaacggcgg 355 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 50 cagccatggcgctccgcacgttggccacgaagagaaccctag 91 |||||||||||||||||||| ||||| ||| || |||||||| Sbjct: 58 cagccatggcgctccgcacgctggcctcgaggaaaaccctag 99
>gb|L19436.1|RICSODAOA Rice mitochondrial manganese-superoxide dismutase (sodAOs1) mRNA, complete cds Length = 878 Score = 299 bits (151), Expect = 1e-77 Identities = 187/199 (93%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 123 cgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatca 182 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 183 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcg 242 Query: 254 agcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccagagcg 313 ||||||||||||||||||||| |||||| ||||| ||| | |||| ||||||||||||| Sbjct: 243 agcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcg 302 Query: 314 ccatcaaattcaacggcgg 332 ||||||| ||||||||||| Sbjct: 303 ccatcaagttcaacggcgg 321 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 50 cagccatggcgctccgcacgttggccacgaagagaaccctag 91 |||||||||||||||||||| ||||| ||| || |||||||| Sbjct: 24 cagccatggcgctccgcacgctggcctcgaggaaaaccctag 65
>gb|L34038.1|RICRMSO Oryza sativa manganese superoxide dismutase (rmsod1) mRNA, complete cds Length = 951 Score = 299 bits (151), Expect = 1e-77 Identities = 187/199 (93%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 208 cgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatca 267 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 268 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcg 327 Query: 254 agcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccagagcg 313 ||||||||||||||||||||| |||||| ||||| ||| | |||| ||||||||||||| Sbjct: 328 agcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcg 387 Query: 314 ccatcaaattcaacggcgg 332 ||||||| ||||||||||| Sbjct: 388 ccatcaagttcaacggcgg 406 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 50 cagccatggcgctccgcacgttggccacgaagagaaccctag 91 |||||||||||||||||||| ||||| ||| || |||||||| Sbjct: 109 cagccatggcgctccgcacgctggcctcgaggaaaaccctag 150
>dbj|AB026725.1| Oryza sativa (japonica cultivar-group) sodA gene for manganese-superoxide dismutase, complete cds Length = 4937 Score = 299 bits (151), Expect = 1e-77 Identities = 187/199 (93%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 1223 cgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatca 1282 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1283 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcg 1342 Query: 254 agcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccagagcg 313 ||||||||||||||||||||| |||||| ||||| ||| | |||| ||||||||||||| Sbjct: 1343 agcagctcgacgccgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcg 1402 Query: 314 ccatcaaattcaacggcgg 332 ||||||| ||||||||||| Sbjct: 1403 ccatcaagttcaacggcgg 1421 Score = 52.0 bits (26), Expect = 0.005 Identities = 38/42 (90%) Strand = Plus / Plus Query: 50 cagccatggcgctccgcacgttggccacgaagagaaccctag 91 |||||||||||||||||||| ||||| ||| || |||||||| Sbjct: 1124 cagccatggcgctccgcacgctggcctcgaggaaaaccctag 1165
>gb|DQ245409.1| Zea mays clone 15275 mRNA sequence Length = 916 Score = 291 bits (147), Expect = 3e-75 Identities = 204/223 (91%) Strand = Plus / Plus Query: 114 gaggggcgtggcgacgttcacgctccccgacctcccctacgactacggcgcgctggagcc 173 |||||| ||| ||||| || |||||||||||||| ||||||||| ||||||||||||||| Sbjct: 132 gaggggggtgacgacggtcgcgctccccgacctctcctacgacttcggcgcgctggagcc 191 Query: 174 ggccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgc 233 |||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 192 ggccatctcgggggagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgc 251 Query: 234 caactacaacaaggcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccgg 293 |||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| |||| Sbjct: 252 caactacaacaaggcgctggagcagctcgacgctgccgtcgccaagggcgacgcctccgc 311 Query: 294 cgtcgtccacctccagagcgccatcaaattcaacggcggcggt 336 |||||||| |||||| |||||||||| ||||||||||||||| Sbjct: 312 tgtcgtccagctccagggcgccatcaagttcaacggcggcggt 354
>gb|L34039.1|RICRMSOA Oryza sativa manganese superoxide dismutase (rmsod2) mRNA, complete cds Length = 1352 Score = 291 bits (147), Expect = 3e-75 Identities = 186/199 (93%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 ||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||||| Sbjct: 606 cgctcccggacctcccctacgactacggcgcgctggagccggccatctccggggagatca 665 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 666 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggccctcg 725 Query: 254 agcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccagagcg 313 ||||||||||||| ||||||| |||||| ||||| ||| | |||| ||||||||||||| Sbjct: 726 agcagctcgacgctgccgtcgccaagggcgacgcccccgccatcgtgcacctccagagcg 785 Query: 314 ccatcaaattcaacggcgg 332 ||||||| ||||||||||| Sbjct: 786 ccatcaagttcaacggcgg 804
>gb|L19463.1|MZEMTMSODC Zea mays Mn-superoxide dismutase (Sod3.4) mRNA, complete cds; mitochondrial gene for mitochondrial product Length = 836 Score = 283 bits (143), Expect = 7e-73 Identities = 203/223 (91%) Strand = Plus / Plus Query: 114 gaggggcgtggcgacgttcacgctccccgacctcccctacgactacggcgcgctggagcc 173 |||||| ||| ||||| || |||||||||||||| ||||||||| ||||||||||||||| Sbjct: 136 gaggggggtgacgacggtcgcgctccccgacctctcctacgacttcggcgcgctggagcc 195 Query: 174 ggccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgc 233 |||| |||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 ggccatctcgggggagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgg 255 Query: 234 caactacaacaaggcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccgg 293 |||||||||||||||||| |||||||||||||| ||||||| |||||| ||||| |||| Sbjct: 256 caactacaacaaggcgctggagcagctcgacgctgccgtcgccaagggcgacgcctccgc 315 Query: 294 cgtcgtccacctccagagcgccatcaaattcaacggcggcggt 336 |||||||| |||||| |||||||||| ||||||||||||||| Sbjct: 316 tgtcgtccagctccagggcgccatcaagttcaacggcggcggt 358
>gb|L19461.1|MZEMTMSODA Zea mays Mn-superoxide dismutase (Sod3.2) mRNA, complete cds; mitochondrial gene for mitochondrial product Length = 1055 Score = 246 bits (124), Expect = 2e-61 Identities = 193/216 (89%) Strand = Plus / Plus Query: 114 gaggggcgtggcgacgttcacgctccccgacctcccctacgactacggcgcgctggagcc 173 |||||| ||| ||||| || |||||||||||||| ||||||||| ||||||||||||||| Sbjct: 110 gaggggggtgacgacggtcgcgctccccgacctctcctacgacttcggcgcgctggagcc 169 Query: 174 ggccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgc 233 || | |||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 ggtcatctcgggggagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgt 229 Query: 234 caactacaacaaggcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccgg 293 |||||||||||||||||| |||||||||||||| | ||||| |||||| ||||| |||| Sbjct: 230 caactacaacaaggcgctggagcagctcgacgctgtcgtcgtcaagggcgacgcctccgc 289 Query: 294 cgtcgtccacctccagagcgccatcaaattcaacgg 329 |||||||| |||||| | |||||||| |||||||| Sbjct: 290 tgtcgtccagctccagggggccatcaagttcaacgg 325
>gb|BT016829.1| Zea mays clone Contig662 mRNA sequence Length = 1064 Score = 236 bits (119), Expect = 2e-58 Identities = 197/223 (88%) Strand = Plus / Plus Query: 114 gaggggcgtggcgacgttcacgctccccgacctcccctacgactacggcgcgctggagcc 173 |||||| ||| ||||| |||| |||||||||||| ||||||||| ||| |||||||| || Sbjct: 124 gaggggggtgacgacggtcacactccccgacctctcctacgacttcggggcgctggaacc 183 Query: 174 ggccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgc 233 |||| |||| || |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 184 ggccatctcgggggagatcatgcgcttgcaccaccagaagcaccacgccacctacgtcgc 243 Query: 234 caactacaacaaggcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccgg 293 |||||||||||||||||| |||||||| ||| | |||||| |||||| ||||| |||| Sbjct: 244 caactacaacaaggcgctggagcagcttgacactgccgtctccaagggcgacgcctccgc 303 Query: 294 cgtcgtccacctccagagcgccatcaaattcaacggcggcggt 336 |||||||| || ||| |||||||||| ||||||||||||||| Sbjct: 304 tgtcgtccagctgcagggcgccatcaagttcaacggcggcggt 346
>gb|L19462.1|MZEMTMSODB Zea mays Mn-superoxide dismutase (Sod3.3) mRNA, complete cds; mitochondrial gene for mitochondrial product Length = 851 Score = 236 bits (119), Expect = 2e-58 Identities = 197/223 (88%) Strand = Plus / Plus Query: 114 gaggggcgtggcgacgttcacgctccccgacctcccctacgactacggcgcgctggagcc 173 |||||| ||| ||||| || |||||||||||||| ||||||||| ||||||||||||||| Sbjct: 144 gaggggggtgacgacggtcgcgctccccgacctctcctacgacttcggcgcgctggagcc 203 Query: 174 ggccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgc 233 || | |||| || ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 204 ggtcatctcgggggagatcatgcgcctgcaccaccagaagaaccacgccacctacgtcgt 263 Query: 234 caactacaacaaggcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccgg 293 |||||||||||||||||| |||||| |||||| | ||||| |||||| |||| |||| Sbjct: 264 caactacaacaaggcgcttgagcagatcgacgatgtcgtcgtcaagggcgacgactccgc 323 Query: 294 cgtcgtccacctccagagcgccatcaaattcaacggcggcggt 336 |||||||| |||||| |||||||||| ||||||||||||||| Sbjct: 324 tgtcgtccagctccagggcgccatcaagttcaacggcggcggt 366
>emb|X12540.1|ZMSOD3 Maize mRNA for superoxide dismutase-3 isoenzyme (EC 1.15.1.1) Length = 1038 Score = 204 bits (103), Expect = 6e-49 Identities = 193/223 (86%) Strand = Plus / Plus Query: 114 gaggggcgtggcgacgttcacgctccccgacctcccctacgactacggcgcgctggagcc 173 |||||| ||| ||||| |||| |||||||||||| ||||||||| |||||||||||| || Sbjct: 132 gaggggggtgacgacggtcacactccccgacctctcctacgacttcggcgcgctggaacc 191 Query: 174 ggccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgc 233 |||| |||| || |||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 192 ggccatctcgggggagatcatgcgcttgcaccaccaaaagcaccacgccacctacgtcgc 251 Query: 234 caactacaacaaggcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccgg 293 |||||||||||||||||| |||||||| || | |||||| |||||| ||||| |||| Sbjct: 252 caactacaacaaggcgctggagcagcttgaaactgccgtctccaagggcgacgcctccgc 311 Query: 294 cgtcgtccacctccagagcgccatcaaattcaacggcggcggt 336 |||||||| || ||| || ||||| ||||||||||||||| Sbjct: 312 tgtcgtccagctgcaggcggcgatcaagttcaacggcggcggt 354
>gb|M33119.1|MZESOD3A Z.mays manganese superoxide dismutase (SOD-3) mRNA, complete cds Length = 1037 Score = 204 bits (103), Expect = 6e-49 Identities = 193/223 (86%) Strand = Plus / Plus Query: 114 gaggggcgtggcgacgttcacgctccccgacctcccctacgactacggcgcgctggagcc 173 |||||| ||| ||||| |||| |||||||||||| ||||||||| |||||||||||| || Sbjct: 132 gaggggggtgacgacggtcacactccccgacctctcctacgacttcggcgcgctggaacc 191 Query: 174 ggccgtctccggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgc 233 |||| |||| || |||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 192 ggccatctcgggggagatcatgcgcttgcaccaccaaaagcaccacgccacctacgtcgc 251 Query: 234 caactacaacaaggcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccgg 293 |||||||||||||||||| |||||||| || | |||||| |||||| ||||| |||| Sbjct: 252 caactacaacaaggcgctggagcagcttgaaactgccgtctccaagggcgacgcctccgc 311 Query: 294 cgtcgtccacctccagagcgccatcaaattcaacggcggcggt 336 |||||||| || ||| || ||||| ||||||||||||||| Sbjct: 312 tgtcgtccagctgcaggcggcgatcaagttcaacggcggcggt 354
>gb|AF094832.1|AF094832 Zantedeschia aethiopica manganese superoxide dismutase (Mnsod) mRNA, complete cds Length = 976 Score = 101 bits (51), Expect = 6e-18 Identities = 126/151 (83%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 |||| |||||||| || |||||||| ||| | |||||||||||| || ||| ||||||| Sbjct: 197 cgctgcccgacctgccgtacgactatggctccctggagccggccatcagcggggagatca 256 Query: 194 tgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcg 253 |||| | || ||||||||||||||| ||||| || ||||||||||||||||||| | Sbjct: 257 tgcggatccatcaccagaagcaccaccaggcctacatcaccaactacaacaaggcgctgg 316 Query: 254 agcagctcgacgccgccgtcggcaaggggga 284 |||||||||||| ||| ||| ||||||||| Sbjct: 317 agcagctcgacgaggccatcgccaaggggga 347
>gb|AF084831.1| Cinnamomum camphora Fe-SOD mRNA, partial cds Length = 764 Score = 99.6 bits (50), Expect = 2e-17 Identities = 125/150 (83%) Strand = Plus / Plus Query: 183 cggcgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaa 242 |||||||||||||| || ||||||||||| |||||| ||||||||| |||||||||| Sbjct: 12 cggcgagatcatgcagctccaccaccagaatcaccaccagacctacgtcaccaactacaa 71 Query: 243 caaggcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtcca 302 |||||| ||||| |||||||||| |||| | | |||||| || || || ||||||| | Sbjct: 72 caaggctctcgaacagctcgacgacgccatggccaagggcgatgcccccaccgtcgtcaa 131 Query: 303 cctccagagcgccatcaaattcaacggcgg 332 | |||||||||||||||||||| ||||| Sbjct: 132 attgcagagcgccatcaaattcaatggcgg 161
>gb|L77078.1|CPAMNSOD Ipomoea batatas manganese superoxide dismutase (Mn-SOD) mRNA, complete cds Length = 1008 Score = 91.7 bits (46), Expect = 6e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 187 gagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaag 246 |||||||||| || || ||||||||||||||| |||||||| |||||||||||||| Sbjct: 201 gagatcatgcagctccatcaccagaagcaccaccaggcctacgtcaccaactacaacaag 260 Query: 247 gcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctc 306 || |||||||||||| ||| ||| || ||||||| || || |||| || |||| | | Sbjct: 261 gctctcgagcagctccacgaggccatcagcaagggcgatgcttccgccgccgtcaaattg 320 Query: 307 cagagcgccatcaaattcaacggcgg 332 |||||||||||||| ||||||||||| Sbjct: 321 cagagcgccatcaagttcaacggcgg 346
>gb|AF263920.1|AF263920 Raphanus sativus superoxide dismutase (sod) gene, complete cds Length = 2711 Score = 85.7 bits (43), Expect = 4e-13 Identities = 163/203 (80%) Strand = Plus / Plus Query: 130 ttcacgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgag 189 |||||||| || || |||||||| || ||| |||||||||||||||| | ||||||| Sbjct: 1497 ttcacgcttcctgatctcccctatgattacagcgcgctggagccggcgataagcggcgag 1556 Query: 190 atcatgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcg 249 ||||||| | || ||||||||||||||| | |||||| | ||||||||||| || Sbjct: 1557 atcatgcagatccatcaccagaagcaccaccaggcttacgtcactaactacaacaatgcc 1616 Query: 250 ctcgagcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccag 309 |||||||||||||| |||||| |||||| ||||| |||| ||||| | || ||| Sbjct: 1617 ctcgagcagctcgatcaggccgtcaacaagggagacgcttccgctgtcgttaagctgcag 1676 Query: 310 agcgccatcaaattcaacggcgg 332 ||||||||||| ||||||||||| Sbjct: 1677 agcgccatcaagttcaacggcgg 1699
>gb|AY641734.2| Camellia sinensis manganese superoxide dismutase mRNA, complete cds Length = 1095 Score = 83.8 bits (42), Expect = 1e-12 Identities = 105/126 (83%) Strand = Plus / Plus Query: 145 ctcccctacgactacggcgcgctggagccggccgtctccggcgagatcatgcgcctgcac 204 ||||| |||||||| |||| || ||||||||| || ||| |||||||||| || || Sbjct: 211 ctcccttacgactatagcgctctcgagccggccatcagcggtgagatcatgcagctccat 270 Query: 205 caccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcgagcagctcgac 264 ||||||||||| ||| || |||||| |||||||||||||||| ||||||||||||||| Sbjct: 271 caccagaagcatcacaagacttacgtcaccaactacaacaaggctctcgagcagctcgac 330 Query: 265 gccgcc 270 | |||| Sbjct: 331 gacgcc 336 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 cagagcgccatcaaattcaacggcgg 332 |||||||||||||| ||||||||||| Sbjct: 373 cagagcgccatcaagttcaacggcgg 398
>gb|AF434197.1| Rhodotorula glutinis superoxide dismutase mRNA, complete cds Length = 732 Score = 69.9 bits (35), Expect = 2e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 210 gaagcaccacgccacctacgtcgccaactacaacaaggc 248 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 130 gaagcaccacgccacctacgtcgccaacttcaacaaggc 168
>gb|AY137205.1| Avicennia marina manganese superoxide dismutase mRNA, complete cds Length = 925 Score = 67.9 bits (34), Expect = 8e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 |||| ||||| || ||||||||||| ||||| || ||||| ||| || ||||||||||| Sbjct: 166 cgctgcccgatcttccctacgactatggcgccctcgagcccgccatcagcggcgagatca 225 Query: 194 tgcgcctgcaccaccagaagcaccac 219 ||| || |||||||||||||||||| Sbjct: 226 tgcaactccaccaccagaagcaccac 251
>gb|L28808.1|RABMSD Oryctolagus cuniculus manganese superoxide dismutase mRNA, partial cds Length = 606 Score = 67.9 bits (34), Expect = 8e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||||||||| |||||||||||||||||||||||||| Sbjct: 25 ctccccgacctgccctacgactacggcgcgctggagcc 62
>gb|DQ884949.1| Rheum australe manganese superoxide dismutase (MnSOD) mRNA, complete cds Length = 961 Score = 63.9 bits (32), Expect = 1e-06 Identities = 83/100 (83%) Strand = Plus / Plus Query: 149 cctacgactacggcgcgctggagccggccgtctccggcgagatcatgcgcctgcaccacc 208 |||||||||| ||||| ||||||||||| || ||||||||||||| |||||||||| Sbjct: 153 cctacgactatggcgctctggagccggcgatcagtggcgagatcatgcagctgcaccacc 212 Query: 209 agaagcaccacgccacctacgtcgccaactacaacaaggc 248 ||||||| || |||||||| ||||| |||||||||| Sbjct: 213 agaagcatcatcagacctacgttaccaacgacaacaaggc 252
>gb|AF510071.1| Musa acuminata superoxide dismutase mRNA, partial cds Length = 417 Score = 63.9 bits (32), Expect = 1e-06 Identities = 83/100 (83%) Strand = Plus / Plus Query: 227 acgtcgccaactacaacaaggcgctcgagcagctcgacgccgccgtcggcaagggggacg 286 ||||| ||||||||||||| || || ||||||||||| | || || | ||||||||||| Sbjct: 1 acgtcaccaactacaacaatgccctggagcagctcgagacggctgtggccaagggggacg 60 Query: 287 cgtccggcgtcgtccacctccagagcgccatcaaattcaa 326 | |||| ||||| | ||| |||||||||||||| ||||| Sbjct: 61 catccgcggtcgttcgcctgcagagcgccatcaagttcaa 100
>gb|AY674270.1| Ixodes pacificus clone IPM_P3_F10 manganese superoxide dismutase mRNA, complete cds; mitochondrial Length = 570 Score = 61.9 bits (31), Expect = 5e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 200 tgcaccaccagaagcaccacgccacctacgt 230 ||||||||||||||||||||||||||||||| Sbjct: 143 tgcaccaccagaagcaccacgccacctacgt 173
>gb|AF061333.1|AF061333 Raphanus sativus superoxide dismutase (sod) mRNA, complete cds Length = 830 Score = 61.9 bits (31), Expect = 5e-06 Identities = 160/203 (78%) Strand = Plus / Plus Query: 130 ttcacgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgag 189 |||||||| || || |||||||| || ||| ||||| |||||||||| | ||||||| Sbjct: 116 ttcacgcttcctgatctcccctatgattacagcgcgttggagccggcgataagcggcgag 175 Query: 190 atcatgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcg 249 ||||||| | || ||||||||||||||| | |||||| | || |||||||| || Sbjct: 176 atcatgcagatccatcaccagaagcaccaccaggcttacgtcactaattacaacaatgcc 235 Query: 250 ctcgagcagctcgacgccgccgtcggcaagggggacgcgtccggcgtcgtccacctccag 309 ||||||||||| || |||||| |||||| ||||| |||| ||||| | || ||| Sbjct: 236 ctcgagcagctggatcaggccgtcaacaagggagacgcttccgctgtcgttaagctgcag 295 Query: 310 agcgccatcaaattcaacggcgg 332 ||||||||||| ||||||||||| Sbjct: 296 agcgccatcaagttcaacggcgg 318
>dbj|AB028460.1| Barbula unguiculata Mn-SOD mRNA for manganese superoxide dismutase, complete cds Length = 672 Score = 61.9 bits (31), Expect = 5e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 190 atcatgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaaggcg 249 ||||||| ||||||||||| ||||||||| || ||||| | ||||||||||||||| Sbjct: 145 atcatgcagctgcaccaccaaaagcaccaccagacgtacgtgacgaactacaacaaggcg 204 Query: 250 ctcgagcagct 260 ||||||||||| Sbjct: 205 ctcgagcagct 215
>dbj|AB220506.1| Macaca fascicularis mRNA, clone QnpA-14761: similar to Homo sapiens superoxide dismutase 2, mitochondrial (SOD2), mRNA, NM_000636.2 Length = 1981 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||||||||| ||||||||||||||||| |||||||| Sbjct: 218 ctccccgacctgccctacgactacggcgccctggagcc 255
>dbj|AB201468.1| Macaca nemestrina mRNA for superoxide dismutase, complete cds Length = 669 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||||||||| ||||||||||||||||| |||||||| Sbjct: 82 ctccccgacctgccctacgactacggcgccctggagcc 119
>emb|CR861415.1| Pongo pygmaeus mRNA; cDNA DKFZp459E042 (from clone DKFZp459E042) Length = 3899 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||||||||| ||||||||||||||||| |||||||| Sbjct: 249 ctccccgacctgccctacgactacggcgccctggagcc 286
>dbj|AB087281.1| Callithrix jacchus mRNA for Mn-superoxide dismutase, complete cds Length = 600 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||||||||| ||||||||||||||||| |||||||| Sbjct: 13 ctccccgacctgccctacgactacggcgccctggagcc 50
>dbj|AB087280.1| Cebus apella mRNA for Mn-superoxide dismutase, complete cds Length = 600 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||||||||| ||||||||||||||||| |||||||| Sbjct: 13 ctccccgacctgccctacgactacggcgccctggagcc 50
>ref|NM_001032805.1| Macaca mulatta Mn-superoxide dismutase (LOC574097), mRNA dbj|AB087279.1| Macaca mulatta mRNA for Mn-superoxide dismutase, complete cds Length = 600 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||||||||| ||||||||||||||||| |||||||| Sbjct: 13 ctccccgacctgccctacgactacggcgccctggagcc 50
>dbj|AB087278.1| Macaca fascicularis mRNA for Mn-superoxide dismutase, complete cds Length = 600 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||||||||| ||||||||||||||||| |||||||| Sbjct: 13 ctccccgacctgccctacgactacggcgccctggagcc 50
>dbj|AB087277.1| Macaca fuscata mRNA for Mn-superoxide dismutase, complete cds Length = 600 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||||||||| ||||||||||||||||| |||||||| Sbjct: 13 ctccccgacctgccctacgactacggcgccctggagcc 50
>dbj|AB087275.1| Pongo pygmaeus mRNA for Mn-superoxide dismutase, complete cds Length = 600 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||||||||| ||||||||||||||||| |||||||| Sbjct: 13 ctccccgacctgccctacgactacggcgccctggagcc 50
>gb|EF031034.1| Acanthus ebracteatus manganese superoxide dismutase mRNA, partial cds Length = 786 Score = 56.0 bits (28), Expect = 3e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 277 aagggggacgcgtccggcgtcgtccacctccagagcgccatcaaattcaacggcgg 332 ||||| ||||| ||| ||||||| | || |||||||||||||||||||||||||| Sbjct: 217 aagggcgacgcatccaccgtcgtcaagctgcagagcgccatcaaattcaacggcgg 272 Score = 50.1 bits (25), Expect = 0.019 Identities = 70/85 (82%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggccgtctccggcgagatca 193 |||| ||||| |||||||||||||| ||||| || ||||| ||| | || ||||||| Sbjct: 74 cgctgcccgatctcccctacgactatggcgccctcgagcctgccattagcgctgagatca 133 Query: 194 tgcgcctgcaccaccagaagcacca 218 ||| || ||||||||||||||||| Sbjct: 134 tgcagcttcaccaccagaagcacca 158
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 56.0 bits (28), Expect = 3e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 148 ccctacgactacggcgcgctggagccggccgtctccggcgagatcatgcgcctgcaccac 207 |||||||||||| ||| ||||||||| |||| |||||||||||| ||||||||| Sbjct: 1123857 ccctacgactactccgctctggagccgtggatctcgggcgagatcatggagctgcaccac 1123798 Query: 208 cagaagcaccacgccacctacgtc 231 | |||||||||||| |||||||| Sbjct: 1123797 gacaagcaccacgccgcctacgtc 1123774
>emb|AJ440726.1|GMA440726 Glycine max partial Mn-sod gene for manganese-superoxide dismutase Length = 431 Score = 56.0 bits (28), Expect = 3e-04 Identities = 82/100 (82%) Strand = Plus / Plus Query: 233 ccaactacaacaaggcgctcgagcagctcgacgccgccgtcggcaagggggacgcgtccg 292 |||||| ||||||||| |||||||||||| | | |||||||| |||| || | |||| Sbjct: 27 ccaacttcaacaaggccctcgagcagctccaagacgccgtcgccaagaaagattcctccg 86 Query: 293 gcgtcgtccacctccagagcgccatcaaattcaacggcgg 332 |||||| | |||||| |||||||||| ||||||||||| Sbjct: 87 ccgtcgttaagctccagggcgccatcaagttcaacggcgg 126
>emb|AM392836.1| Synthetic construct Homo sapiens mRNA for hypothetical protein (SOD2 gene), clone IMAGE:3880111.1E1 Length = 708 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 102 ctccccgacctgccctacgactacggcgccctgga 136
>ref|NM_001024466.1| Homo sapiens superoxide dismutase 2, mitochondrial (SOD2), nuclear gene encoding mitochondrial protein, transcript variant 3, mRNA Length = 918 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 236 ctccccgacctgccctacgactacggcgccctgga 270
>ref|NM_001024465.1| Homo sapiens superoxide dismutase 2, mitochondrial (SOD2), nuclear gene encoding mitochondrial protein, transcript variant 2, mRNA Length = 1035 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 236 ctccccgacctgccctacgactacggcgccctgga 270
>ref|NM_000636.2| Homo sapiens superoxide dismutase 2, mitochondrial (SOD2), nuclear gene encoding mitochondrial protein, transcript variant 1, mRNA Length = 1593 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 236 ctccccgacctgccctacgactacggcgccctgga 270
>gb|DQ893752.1| Homo sapiens clone FLH164214.01L; RZPDo839D12161D SOD2 mRNA, partial sequence Length = 669 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 82 ctccccgacctgccctacgactacggcgccctgga 116
>gb|DQ890587.1| Synthetic construct Homo sapiens clone FLH164218.01X; RZPDo839D12162D SOD2 mRNA, complete sequence Length = 669 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 82 ctccccgacctgccctacgactacggcgccctgga 116
>gb|BT013288.1| Lycopersicon esculentum clone 134898R, mRNA sequence Length = 911 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggc 176 |||||||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 96 cgctccccgatctcccatacgactatggcgccctggagccggc 138
>gb|BC016934.1| Homo sapiens superoxide dismutase 2, mitochondrial, mRNA (cDNA clone MGC:21350 IMAGE:4184203), complete cds Length = 1617 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 146 ctccccgacctgccctacgactacggcgccctgga 180
>dbj|AK097395.1| Homo sapiens cDNA FLJ40076 fis, clone TESTI2000874, highly similar to SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL PRECURSOR (EC 1.15.1.1) Length = 2555 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 1769 ctccccgacctgccctacgactacggcgccctgga 1803
>gb|AY280721.1| Homo sapiens cell-line 11.9.14 manganese-containing superoxide dismutase (SOD2) mRNA, partial cds Length = 640 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 70 ctccccgacctgccctacgactacggcgccctgga 104
>gb|AY280720.1| Homo sapiens cell-line BT-549 manganese-containing superoxide dismutase (SOD2) mRNA, partial cds Length = 627 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 70 ctccccgacctgccctacgactacggcgccctgga 104
>gb|AY280719.1| Homo sapiens cell-line MCF-7 manganese-containing superoxide dismutase (SOD2) mRNA, partial cds Length = 631 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 71 ctccccgacctgccctacgactacggcgccctgga 105
>gb|AY280718.1| Homo sapiens cell-line MCF-12A manganese-containing superoxide dismutase (SOD2) mRNA, partial cds Length = 639 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 79 ctccccgacctgccctacgactacggcgccctgga 113
>gb|BT007684.1| Synthetic construct Homo sapiens superoxide dismutase 2, mitochondrial mRNA, partial cds Length = 669 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 82 ctccccgacctgccctacgactacggcgccctgga 116
>gb|BT006967.1| Homo sapiens superoxide dismutase 2, mitochondrial mRNA, complete cds Length = 669 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 82 ctccccgacctgccctacgactacggcgccctgga 116
>ref|NM_201527.2| Bos taurus superoxide dismutase 2, mitochondrial (SOD2), mRNA gb|BC105378.1| Bos taurus superoxide dismutase 2, mitochondrial, mRNA (cDNA clone MGC:128371 IMAGE:7951428), complete cds Length = 1438 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagccg 174 ||||||||||| || |||||||||||||| ||||||||| Sbjct: 151 ctccccgacctgccgtacgactacggcgccctggagccg 189
>emb|AL135914.25| Human DNA sequence from clone RP1-56L9 on chromosome 6 Contains a novel gene, the SOD2 gene for superoxide dismutase 2, mitochondrial, a pseudogene similar to heterogenous nuclear ribonucleoprotein H, the gene for Wilms' tumor 1-associating protein (KIAA0105) (WTAP), the ACAT2 gene for acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase), the TCP1 gene for t-complex 1 (CCT1, Ccta, D6S230E), the 5' end of the MRPL18 gene for mitochondrial ribosomal protein L18, and 4 CpG islands, complete sequence Length = 165802 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Minus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 64488 ctccccgacctgccctacgactacggcgccctgga 64454
>gb|BC012423.1| Homo sapiens superoxide dismutase 2, mitochondrial, mRNA (cDNA clone MGC:9978 IMAGE:3880111), complete cds Length = 940 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 139 ctccccgacctgccctacgactacggcgccctgga 173
>gb|AY267901.1| Homo sapiens superoxide dismutase 2, mitochondrial (SOD2) gene, complete cds; nuclear gene for mitochondrial product Length = 14916 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 2281 ctccccgacctgccctacgactacggcgccctgga 2315
>emb|X14482.1|NPMNSOD Tobacco mRNA for manganese superoxide dismutase (MnSOD) EC 1.15.1.1) Length = 966 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggc 176 |||||||||| |||||||||||||| || || ||||||||||| Sbjct: 168 cgctccccgatctcccctacgactatggagcactggagccggc 210
>emb|AL050388.1|HSM800535 Homo sapiens mRNA; cDNA DKFZp564M2422 (from clone DKFZp564M2422) Length = 1984 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 159 ctccccgacctgccctacgactacggcgccctgga 193
>gb|DQ003134.1| Homo sapiens manganese-containing superoxide dismutase (SOD2) mRNA, partial cds; nuclear gene for mitochondrial product Length = 637 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 79 ctccccgacctgccctacgactacggcgccctgga 113
>emb|X14322.1|HSMNSOD Human mRNA for mangano-superoxide dismutase (Mn-SOD) Length = 977 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 177 ctccccgacctgccctacgactacggcgccctgga 211
>emb|CR626136.1| full-length cDNA clone CS0DH008YP03 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 879 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 142 ctccccgacctgccctacgactacggcgccctgga 176
>gb|S77127.1|S77127 Homo sapiens manganese superoxide dismutase gene, complete cds Length = 12857 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 1218 ctccccgacctgccctacgactacggcgccctgga 1252
>gb|S67818.1|S67818 manganous superoxide dismutase [cattle, BPAE cells, mRNA, 1324 nt] Length = 1324 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagccg 174 ||||||||||| || |||||||||||||| ||||||||| Sbjct: 109 ctccccgacctgccgtacgactacggcgccctggagccg 147
>gb|AY891509.1| Synthetic construct Homo sapiens clone FLH110313.01L superoxide dismutase 2 mitochondrial (SOD2) mRNA, partial cds; nuclear gene for mitochondrial product Length = 669 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 82 ctccccgacctgccctacgactacggcgccctgga 116
>gb|AY891508.1| Synthetic construct Homo sapiens clone FLH110312.01L superoxide dismutase 2 mitochondrial (SOD2) mRNA, partial cds; nuclear gene for mitochondrial product Length = 669 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 82 ctccccgacctgccctacgactacggcgccctgga 116
>gb|AY888896.1| Synthetic construct Homo sapiens clone FLH110281.01X superoxide dismutase 2 mitochondrial (SOD2) mRNA, complete cds; nuclear gene for mitochondrial product Length = 669 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 82 ctccccgacctgccctacgactacggcgccctgga 116
>gb|AY888895.1| Synthetic construct Homo sapiens clone FLH110280.01X superoxide dismutase 2 mitochondrial (SOD2) mRNA, complete cds; nuclear gene for mitochondrial product Length = 669 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 82 ctccccgacctgccctacgactacggcgccctgga 116
>dbj|AB093097.1| Nicotiana tabacum MnSOD mRNA for manganese superoxide dismutase, partial cds Length = 572 Score = 54.0 bits (27), Expect = 0.001 Identities = 39/43 (90%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggc 176 |||||||||| |||||||||||||| || || ||||||||||| Sbjct: 61 cgctccccgatctcccctacgactatggagcactggagccggc 103
>dbj|AB087276.1| Hylobates lar mRNA for Mn-superoxide dismutase, complete cds Length = 600 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 139 cccgacctcccctacgactacggcgcgctggagcc 173 |||||||| ||||||||||||||||| |||||||| Sbjct: 16 cccgacctgccctacgactacggcgccctggagcc 50
>ref|NM_001009022.1| Pan troglodytes superoxide dismutase 2, mitochondrial (SOD2), mRNA dbj|AB087274.1| Pan troglodytes mRNA for Mn-superoxide dismutase, complete cds Length = 600 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 13 ctccccgacctgccctacgactacggcgccctgga 47
>gb|BT020988.1| Bos taurus superoxide dismutase 2, mitochondrial (SOD2), mRNA, complete cds Length = 1280 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagccg 174 ||||||||||| || |||||||||||||| ||||||||| Sbjct: 134 ctccccgacctgccgtacgactacggcgccctggagccg 172
>gb|BC035422.1| Homo sapiens superoxide dismutase 2, mitochondrial, mRNA (cDNA clone IMAGE:3880193) Length = 940 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 139 ctccccgacctgccctacgactacggcgccctgga 173
>emb|X07834.1|HSSOD Human mRNA for manganese superoxide dismutase (EC 1.15.1.1) Length = 1026 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 86 ctccccgacctgccctacgactacggcgccctgga 120
>emb|Y00985.1|HSSOD2 Human mRNA for manganese-containing superoxide dismutase Length = 976 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 176 ctccccgacctgccctacgactacggcgccctgga 210
>emb|X59445.1|HSMNSODGE H.sapiens mRNA for colon carcinoma Manganese Superoxide Dismutase Length = 969 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 142 ctccccgacctgccctacgactacggcgccctgga 176
>emb|X15132.1|HSMSUDIS Human mRNA for manganese containing superoxide dismutase (EC 1.15.1.1) Length = 989 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 142 ctccccgacctgccctacgactacggcgccctgga 176
>emb|Y00472.1|HSMNSODR Human mRNA for Mn superoxide dismutase (EC 1.15.1.1.) Length = 829 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 148 ctccccgacctgccctacgactacggcgccctgga 182
>gb|L34157.1|HUMSOD2TS Human manganese superoxide dismutase (SOD2) gene exons 1-2, 5' end Length = 3302 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 2769 ctccccgacctgccctacgactacggcgccctgga 2803
>gb|M36693.1|HUMSODRMN Human manganese-containing superoxide dismutase mRNA, complete cds Length = 976 Score = 54.0 bits (27), Expect = 0.001 Identities = 33/35 (94%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctgga 170 ||||||||||| ||||||||||||||||| ||||| Sbjct: 176 ctccccgacctgccctacgactacggcgccctgga 210
>gb|L22092.1|BOVMSDA Cow manganous superoxide dismutase mRNA, 3' end Length = 1330 Score = 54.0 bits (27), Expect = 0.001 Identities = 36/39 (92%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagccg 174 ||||||||||| || |||||||||||||| ||||||||| Sbjct: 109 ctccccgacctgccgtacgactacggcgccctggagccg 147
>ref|NM_001035593.1| Arabidopsis thaliana MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1); manganese superoxide dismutase (MSD1) mRNA, complete cds Length = 1003 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 307 cagagcgccatcaaattcaacggcgg 332 |||||||||||||||||||||||||| Sbjct: 306 cagagcgccatcaaattcaacggcgg 331
>ref|NM_111929.2| Arabidopsis thaliana MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1); manganese superoxide dismutase (MSD1) mRNA, complete cds Length = 1006 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 307 cagagcgccatcaaattcaacggcgg 332 |||||||||||||||||||||||||| Sbjct: 306 cagagcgccatcaaattcaacggcgg 331
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Minus Query: 307 cagagcgccatcaaattcaacggcgg 332 |||||||||||||||||||||||||| Sbjct: 97833 cagagcgccatcaaattcaacggcgg 97808
>gb|AE006014.1| Caulobacter crescentus CB15 section 340 of 359 of the complete genome Length = 14676 Score = 52.0 bits (26), Expect = 0.005 Identities = 83/102 (81%) Strand = Plus / Minus Query: 126 gacgttcacgctccccgacctcccctacgactacggcgcgctggagccggccgtctccgg 185 ||||| |||||| |||||||| ||||||| ||| | ||||||||||||| || |||| | Sbjct: 4013 gacgtacacgcttcccgacctgccctacgcctatgacgcgctggagccgaccatctcggc 3954 Query: 186 cgagatcatgcgcctgcaccaccagaagcaccacgccaccta 227 | | | | ||||| | |||||| | |||||||||||| |||| Sbjct: 3953 caacaccctgcgcttccaccacgacaagcaccacgccgccta 3912
>gb|AY072495.1| Arabidopsis thaliana putative Mn superoxide dismutase (At3g10920; F9F8.26) mRNA, complete cds Length = 734 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 307 cagagcgccatcaaattcaacggcgg 332 |||||||||||||||||||||||||| Sbjct: 268 cagagcgccatcaaattcaacggcgg 293
>gb|AY059807.1| Arabidopsis thaliana putative Mn superoxide dismutase (At3g10920; F9F8.26) mRNA, complete cds Length = 898 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 307 cagagcgccatcaaattcaacggcgg 332 |||||||||||||||||||||||||| Sbjct: 295 cagagcgccatcaaattcaacggcgg 320
>gb|AY085319.1| Arabidopsis thaliana clone 14503 mRNA, complete sequence Length = 930 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 307 cagagcgccatcaaattcaacggcgg 332 |||||||||||||||||||||||||| Sbjct: 306 cagagcgccatcaaattcaacggcgg 331
>emb|BX824797.1|CNS0A4O6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH73ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 819 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 307 cagagcgccatcaaattcaacggcgg 332 |||||||||||||||||||||||||| Sbjct: 212 cagagcgccatcaaattcaacggcgg 237
>gb|AF061518.1|AF061518 Arabidopsis thaliana manganese superoxide dismutase (MSD1) mRNA, complete cds Length = 877 Score = 52.0 bits (26), Expect = 0.005 Identities = 26/26 (100%) Strand = Plus / Plus Query: 307 cagagcgccatcaaattcaacggcgg 332 |||||||||||||||||||||||||| Sbjct: 284 cagagcgccatcaaattcaacggcgg 309
>ref|XM_367786.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07697.4) partial mRNA Length = 642 Score = 50.1 bits (25), Expect = 0.019 Identities = 40/45 (88%) Strand = Plus / Plus Query: 211 aagcaccacgccacctacgtcgccaactacaacaaggcgctcgag 255 ||||||||||| ||||||| |||||| |||||||||||||||| Sbjct: 100 aagcaccacgcggcctacgtggccaacctcaacaaggcgctcgag 144
>ref|XM_754139.1| Ustilago maydis 521 hypothetical protein (UM03085.1) partial mRNA Length = 621 Score = 50.1 bits (25), Expect = 0.019 Identities = 28/29 (96%) Strand = Plus / Plus Query: 304 ctccagagcgccatcaaattcaacggcgg 332 ||||||||||||||||| ||||||||||| Sbjct: 184 ctccagagcgccatcaagttcaacggcgg 212
>ref|XM_742559.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g04260) partial mRNA Length = 975 Score = 50.1 bits (25), Expect = 0.019 Identities = 31/33 (93%) Strand = Plus / Plus Query: 233 ccaactacaacaaggcgctcgagcagctcgacg 265 |||||||| ||||||||||||||||||||||| Sbjct: 260 ccaactacgccaaggcgctcgagcagctcgacg 292
>gb|AC060796.8| Homo sapiens chromosome 17, clone CTD-2245L18, complete sequence Length = 118646 Score = 50.1 bits (25), Expect = 0.019 Identities = 25/25 (100%) Strand = Plus / Plus Query: 486 aagaccaaaaaatttactgagatga 510 ||||||||||||||||||||||||| Sbjct: 51213 aagaccaaaaaatttactgagatga 51237
>emb|AJ278863.1|DLA278863 Digitalis lanata partial mRNA for manganese superoxide dismutase (MN-SOD gene) Length = 858 Score = 50.1 bits (25), Expect = 0.019 Identities = 115/145 (79%) Strand = Plus / Plus Query: 126 gacgttcacgctccccgacctcccctacgactacggcgcgctggagccggccgtctccgg 185 ||||||| |||| ||||| || ||||||||||| ||||| || ||||| || || || Sbjct: 66 gacgttctcgctgcccgatctgccctacgactatggcgccctcgagcccgcaatcagtgg 125 Query: 186 cgagatcatgcgcctgcaccaccagaagcaccacgccacctacgtcgccaactacaacaa 245 |||||| |||| || |||||||| ||||||||| | ||| || |||||||||| || Sbjct: 126 cgagataatgcagctccaccaccaaaagcaccaccaggcttacatcaccaactacaataa 185 Query: 246 ggcgctcgagcagctcgacgccgcc 270 || || ||||||||||| |||||| Sbjct: 186 agctcttgagcagctcgatgccgcc 210
>dbj|D83493.1| Homo sapiens MnSOD gene, mitochondrial targetting sequence, partial cds Length = 418 Score = 50.1 bits (25), Expect = 0.019 Identities = 28/29 (96%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgc 164 ||||||||||| ||||||||||||||||| Sbjct: 386 ctccccgacctgccctacgactacggcgc 414
>gb|AC006947.2|AC006947 Homo sapiens chromosome 17, clone hRPK.115_C_3, complete sequence Length = 175775 Score = 50.1 bits (25), Expect = 0.019 Identities = 25/25 (100%) Strand = Plus / Minus Query: 486 aagaccaaaaaatttactgagatga 510 ||||||||||||||||||||||||| Sbjct: 170170 aagaccaaaaaatttactgagatga 170146
>gb|AC160765.4| Mus musculus BAC clone RP23-26O24 from chromosome 13, complete sequence Length = 234761 Score = 48.1 bits (24), Expect = 0.077 Identities = 24/24 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacaccag 34 |||||||||||||||||||||||| Sbjct: 52368 cacgcgcacacacacgcacaccag 52345
>gb|AC140443.2| Mus musculus BAC clone RP24-171A23 from chromosome 13, complete sequence Length = 180633 Score = 48.1 bits (24), Expect = 0.077 Identities = 24/24 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacaccag 34 |||||||||||||||||||||||| Sbjct: 20720 cacgcgcacacacacgcacaccag 20743
>gb|AF299388.1| Gallus gallus MnSOD mRNA, complete cds Length = 1102 Score = 48.1 bits (24), Expect = 0.077 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gacctcccctacgactacggcgcgctggagcc 173 ||||| ||||||||||| |||||||||||||| Sbjct: 121 gacctgccctacgactatggcgcgctggagcc 152
>gb|AF264029.1| Callinectes sapidus mitochondrial manganese superoxide dismutase precursor, mRNA, complete cds; nuclear gene for mitochondrial product Length = 1147 Score = 48.1 bits (24), Expect = 0.077 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gacctcccctacgactacggcgcgctggagcc 173 ||||||||||||||||| || ||||||||||| Sbjct: 130 gacctcccctacgactatggagcgctggagcc 161
>gb|AY274807.1| Lotus corniculatus var. japonicus Mn-superoxide dismutase (sodA) gene, complete cds Length = 4070 Score = 48.1 bits (24), Expect = 0.077 Identities = 48/56 (85%) Strand = Plus / Plus Query: 205 caccagaagcaccacgccacctacgtcgccaactacaacaaggcgctcgagcagct 260 ||||||||||| ||| || ||| || |||||||||||||||| ||||||||||| Sbjct: 239 caccagaagcatcaccagacttacatcaccaactacaacaaggctctcgagcagct 294
>dbj|D84646.1|TTHILVB Thermus aquaticus genes for acetolactate synthase, fumarase, manganese superoxide dismutase, partial and complete cds Length = 6955 Score = 48.1 bits (24), Expect = 0.077 Identities = 33/36 (91%) Strand = Plus / Plus Query: 202 caccaccagaagcaccacgccacctacgtcgccaac 237 ||||||||||||||||||| | |||||||| ||||| Sbjct: 4613 caccaccagaagcaccacggcgcctacgtcaccaac 4648
>dbj|D13387.1|TTHSUPDIS Thermus aquaticus gene for superoxide dismutase, complete cds Length = 915 Score = 48.1 bits (24), Expect = 0.077 Identities = 33/36 (91%) Strand = Plus / Plus Query: 202 caccaccagaagcaccacgccacctacgtcgccaac 237 ||||||||||||||||||| | |||||||| ||||| Sbjct: 171 caccaccagaagcaccacggcgcctacgtcaccaac 206
>dbj|AK239058.1| Sus scrofa mRNA, clone:THY010060A04, expressed in thymus Length = 1201 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagccg 174 ||||||||||| || |||||||| ||||| ||||||||| Sbjct: 176 ctccccgacctgccgtacgactatggcgccctggagccg 214
>dbj|AK235119.1| Sus scrofa mRNA, clone:OVRM10051E11, expressed in ovary Length = 1686 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagccg 174 ||||||||||| || |||||||| ||||| ||||||||| Sbjct: 399 ctccccgacctgccgtacgactatggcgccctggagccg 437
>ref|XM_001213098.1| Aspergillus terreus NIH2624 superoxide dismutase, mitochondrial precursor (ATEG_03920) mRNA, complete cds Length = 684 Score = 46.1 bits (23), Expect = 0.30 Identities = 59/71 (83%) Strand = Plus / Plus Query: 149 cctacgactacggcgcgctggagccggccgtctccggcgagatcatgcgcctgcaccacc 208 |||| ||||| |||||||||||||| || |||| ||| |||||||| ||||||||| Sbjct: 119 cctatgactatggcgcgctggagccctccatctcgggcaagatcatggagctgcaccaca 178 Query: 209 agaagcaccac 219 |||| |||||| Sbjct: 179 agaaccaccac 189
>gb|AF450119.1| Thalassiosira weissflogii manganese superoxide dismutase (DIMNSOD) mRNA, partial cds Length = 1096 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Plus Query: 214 caccacgccacctacgtcgccaa 236 ||||||||||||||||||||||| Sbjct: 298 caccacgccacctacgtcgccaa 320
>ref|NM_017051.2| Rattus norvegicus superoxide dismutase 2, mitochondrial (Sod2), mRNA gb|BC070913.1| Rattus norvegicus superoxide dismutase 2, mitochondrial, mRNA (cDNA clone MGC:91729 IMAGE:7104698), complete cds Length = 2090 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagccg 174 ||||| ||||| || |||||||| ||||||||||||||| Sbjct: 165 ctccctgacctgccttacgactatggcgcgctggagccg 203
>ref|XM_658089.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5577.2), mRNA Length = 672 Score = 46.1 bits (23), Expect = 0.30 Identities = 89/111 (80%) Strand = Plus / Plus Query: 151 tacgactacggcgcgctggagccggccgtctccggcgagatcatgcgcctgcaccaccag 210 |||||||| ||||| ||||||| || |||||||| |||||||| ||||||||| || Sbjct: 109 tacgactatggcgctttggagcccgctatctccggcaagatcatggagctgcaccacaag 168 Query: 211 aagcaccacgccacctacgtcgccaactacaacaaggcgctcgagcagctc 261 || |||||| ||||||||| || |||||||| || ||||||||||| Sbjct: 169 aaccaccaccagacctacgtcaacagctacaacaccgccatcgagcagctc 219
>emb|AM039689.1| Pinus pinea mitochondrial partial mRNA for manganese superoxide dismutase (mnsod gene) Length = 589 Score = 46.1 bits (23), Expect = 0.30 Identities = 38/43 (88%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggc 176 |||||||||| ||||||||| |||| || || ||||||||||| Sbjct: 85 cgctccccgatctcccctacaactatggagcactggagccggc 127
>gb|AY027564.1| Aspergillus nidulans Mn-superoxide dismutase (sodB) mRNA, complete cds Length = 799 Score = 46.1 bits (23), Expect = 0.30 Identities = 89/111 (80%) Strand = Plus / Plus Query: 151 tacgactacggcgcgctggagccggccgtctccggcgagatcatgcgcctgcaccaccag 210 |||||||| ||||| ||||||| || |||||||| |||||||| ||||||||| || Sbjct: 140 tacgactatggcgctttggagcccgctatctccggcaagatcatggagctgcaccacaag 199 Query: 211 aagcaccacgccacctacgtcgccaactacaacaaggcgctcgagcagctc 261 || |||||| ||||||||| || |||||||| || ||||||||||| Sbjct: 200 aaccaccaccagacctacgtcaacagctacaacaccgccatcgagcagctc 250
>emb|BX068183.1|CNS09ORV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC52BB02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 921 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 10 ccacgcgcacacacacgcacacc 32 ||||||||||||||||||||||| Sbjct: 475 ccacgcgcacacacacgcacacc 453
>emb|Y00497.1|RNMNSOD Rat mRNA for manganese-containing superoxide dismutase (MnSoD) Length = 1438 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagccg 174 ||||| ||||| || |||||||| ||||||||||||||| Sbjct: 93 ctccctgacctgccttacgactatggcgcgctggagccg 131
>emb|X56600.1|RNSOD2 Rat SOD-2 gene for manganese-containing superoxide dismutase Length = 9811 Score = 46.1 bits (23), Expect = 0.30 Identities = 35/39 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagccg 174 ||||| ||||| || |||||||| ||||||||||||||| Sbjct: 2767 ctccctgacctgccttacgactatggcgcgctggagccg 2805
>emb|AJ238316.2|PPE238316 Prunus persica mitochondrial mRNA for manganese superoxide dismutase 1 Length = 1092 Score = 46.1 bits (23), Expect = 0.30 Identities = 38/43 (88%) Strand = Plus / Plus Query: 134 cgctccccgacctcccctacgactacggcgcgctggagccggc 176 |||||||||| ||||||||| |||| || || ||||||||||| Sbjct: 184 cgctccccgatctcccctacaactatggagcactggagccggc 226
>gb|DQ822921.1| Glycine max MYB transcription factor MYB143 (MYB143) mRNA, complete cds Length = 1288 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 gccgtctccggcgagatcatgc 196 |||||||||||||||||||||| Sbjct: 106 gccgtctccggcgagatcatgc 127
>gb|DQ822920.1| Glycine max MYB transcription factor MYB183 (MYB183) mRNA, complete cds Length = 1272 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 gccgtctccggcgagatcatgc 196 |||||||||||||||||||||| Sbjct: 105 gccgtctccggcgagatcatgc 126
>emb|AL442007.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0212B02, complete sequence Length = 118971 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 ccacgcgcacacacacgcacac 31 |||||||||||||||||||||| Sbjct: 90750 ccacgcgcacacacacgcacac 90729
>gb|AC164119.4| Mus musculus BAC clone RP24-288I15 from chromosome 5, complete sequence Length = 189243 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacaccagag 36 ||||| |||||||||||||||||||| Sbjct: 83751 cacgcacacacacacgcacaccagag 83726
>gb|DQ193969.1| Citrus maxima voucher Y.Liu 1046 SOD (SOD) mRNA, partial cds Length = 426 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 235 aactacaacaaggcgctcgagcagct 260 ||||||||||||||| |||||||||| Sbjct: 25 aactacaacaaggcggtcgagcagct 50
>gb|DQ193968.1| Citrus limon voucher Y.Liu 1103 SOD (SOD) mRNA, partial cds Length = 426 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 235 aactacaacaaggcgctcgagcagct 260 ||||||||||||||| |||||||||| Sbjct: 25 aactacaacaaggcggtcgagcagct 50
>gb|DQ193967.1| Citrus maxima voucher Y.Liu 1015 SOD (SOD) mRNA, partial cds Length = 426 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 235 aactacaacaaggcgctcgagcagct 260 ||||||||||||||| |||||||||| Sbjct: 25 aactacaacaaggcggtcgagcagct 50
>gb|DQ193966.1| Citrus maxima voucher Y.Liu 1037 SOD (SOD) mRNA, partial cds Length = 426 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 235 aactacaacaaggcgctcgagcagct 260 ||||||||||||||| |||||||||| Sbjct: 25 aactacaacaaggcggtcgagcagct 50
>gb|DQ193965.1| Citrus maxima voucher Y.Liu 1011 SOD (SOD) mRNA, partial cds Length = 426 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 235 aactacaacaaggcgctcgagcagct 260 ||||||||||||||| |||||||||| Sbjct: 25 aactacaacaaggcggtcgagcagct 50
>gb|DQ193964.1| Poncirus trifoliata var. monstrosa voucher Y.Liu 1125 SOD (SOD) mRNA, partial cds Length = 426 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 235 aactacaacaaggcgctcgagcagct 260 ||||||||||||||| |||||||||| Sbjct: 25 aactacaacaaggcggtcgagcagct 50
>gb|AY491919.1| Parnassius apollo clone PA72 microsatellite sequence Length = 344 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacacc 32 |||||||||||||||||||||| Sbjct: 209 cacgcgcacacacacgcacacc 230
>gb|AY491912.1| Parnassius apollo clone PA64 microsatellite sequence Length = 344 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacacc 32 |||||||||||||||||||||| Sbjct: 209 cacgcgcacacacacgcacacc 230
>gb|AC124226.12| Mus musculus chromosome 15, clone RP23-94G21, complete sequence Length = 189787 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 552 catttgttgtccattaatttct 573 |||||||||||||||||||||| Sbjct: 131409 catttgttgtccattaatttct 131430
>gb|AC142098.2| Mus musculus BAC clone RP24-458F14 from chromosome 19, complete sequence Length = 193811 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 ccacgcgcacacacacgcacac 31 |||||||||||||||||||||| Sbjct: 143370 ccacgcgcacacacacgcacac 143349
>gb|AC127271.3| Mus musculus BAC clone RP23-453G12 from chromosome 19, complete sequence Length = 191346 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 ccacgcgcacacacacgcacac 31 |||||||||||||||||||||| Sbjct: 153254 ccacgcgcacacacacgcacac 153275
>gb|AC127172.13| Mus musculus strain C57BL/6J clone rp23-387d2 map 17, complete sequence Length = 203077 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 175193 ctcccagacctgccttacgactatggcgcgctggagcc 175230
>gb|AC087262.2| Rattus norvegicus strain Brown Norway clone RP31-151E23, complete sequence Length = 132809 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacacc 32 |||||||||||||||||||||| Sbjct: 22820 cacgcgcacacacacgcacacc 22799
>gb|BC010548.1| Mus musculus superoxide dismutase 2, mitochondrial, mRNA (cDNA clone MGC:6144 IMAGE:3581909), complete cds Length = 1162 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 125 ctcccagacctgccttacgactatggcgcgctggagcc 162
>dbj|AK135435.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820420L10 product:superoxide dismutase 2, mitochondrial, full insert sequence Length = 3820 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 278 ctcccagacctgccttacgactatggcgcgctggagcc 315
>dbj|AK152047.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830046G09 product:superoxide dismutase 2, mitochondrial, full insert sequence Length = 916 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 147 ctcccagacctgccttacgactatggcgcgctggagcc 184
>dbj|AK167521.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530018F14 product:superoxide dismutase 2, mitochondrial, full insert sequence Length = 919 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 150 ctcccagacctgccttacgactatggcgcgctggagcc 187
>dbj|AK168591.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920037G01 product:superoxide dismutase 2, mitochondrial, full insert sequence Length = 1035 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 281 ctcccagacctgccttacgactatggcgcgctggagcc 318
>dbj|AK168082.1| Mus musculus CRL-1722 L5178Y-R cDNA, RIKEN full-length enriched library, clone:I730056L11 product:superoxide dismutase 2, mitochondrial, full insert sequence Length = 918 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 150 ctcccagacctgccttacgactatggcgcgctggagcc 187
>dbj|AK002534.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610011F02 product:superoxide dismutase 2, mitochondrial, full insert sequence Length = 1171 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 150 ctcccagacctgccttacgactatggcgcgctggagcc 187
>dbj|AK002428.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610009N16 product:superoxide dismutase 2, mitochondrial, full insert sequence Length = 900 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 149 ctcccagacctgccttacgactatggcgcgctggagcc 186
>gb|AC023357.12| Homo sapiens 12 BAC RP11-310L12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 4601 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 ccacgcgcacacacacgcacac 31 |||||||||||||||||||||| Sbjct: 4479 ccacgcgcacacacacgcacac 4458
>gb|AC087894.15| Homo sapiens 12 BAC RP11-749H20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 169117 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 ccacgcgcacacacacgcacac 31 |||||||||||||||||||||| Sbjct: 1808 ccacgcgcacacacacgcacac 1787
>dbj|AK012354.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700043D05 product:superoxide dismutase 2, mitochondrial, full insert sequence Length = 914 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 147 ctcccagacctgccttacgactatggcgcgctggagcc 184
>emb|CT010273.1| Mus musculus full open reading frame cDNA clone RZPDo836G0551D for gene Sod2, Superoxide dismutase 2, mitochondrial; complete cds, incl. stopcodon Length = 669 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 82 ctcccagacctgccttacgactatggcgcgctggagcc 119
>gb|S78832.1|S78832S1 Sod-2=manganese superoxide dismutase [mice, C3H/HeJ, Genomic, 535 nt, segment 1 of 4] Length = 535 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 219 ctcccagacctgccttacgactatggcgcgctggagcc 256
>gb|BC018173.1| Mus musculus superoxide dismutase 2, mitochondrial, mRNA (cDNA clone IMAGE:3587227), partial cds Length = 836 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 70 ctcccagacctgccttacgactatggcgcgctggagcc 107
>ref|NM_013671.3| Mus musculus superoxide dismutase 2, mitochondrial (Sod2), mRNA Length = 3824 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 289 ctcccagacctgccttacgactatggcgcgctggagcc 326
>emb|Z18857.1|MMNSODRX M.musculus mRNA for manganese superoxide dismutase Length = 779 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 117 ctcccagacctgccttacgactatggcgcgctggagcc 154
>emb|X04972.1|MMNSODR Mouse mRNA for manganese superoxide dismutase (MnSOD) Length = 897 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 134 ctcccagacctgccttacgactatggcgcgctggagcc 171
>gb|AF388395.1| Phanerochaete chrysosporium manganese superoxide dismutase (MNSOD1) gene, complete cds Length = 1960 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||||||||||||||||| ||||| ||| || ||||| Sbjct: 614 ctccccgacctcccctacgcctacgacgccctcgagcc 651
>gb|AF062654.1|AF062654 Emericella nidulans manganese superoxide dismutase (sod1) gene, complete cds Length = 1600 Score = 44.1 bits (22), Expect = 1.2 Identities = 88/110 (80%) Strand = Plus / Plus Query: 152 acgactacggcgcgctggagccggccgtctccggcgagatcatgcgcctgcaccaccaga 211 ||||||| ||||| ||||||| || |||||||| |||||||| ||||||||| ||| Sbjct: 585 acgactatggcgctttggagcccgctatctccggcaagatcatggagctgcaccacaaga 644 Query: 212 agcaccacgccacctacgtcgccaactacaacaaggcgctcgagcagctc 261 | |||||| ||||||||| || |||||||| || ||||||||||| Sbjct: 645 accaccaccagacctacgtcaacagctacaacaccgccatcgagcagctc 694
>gb|AF242310.1|AF242310 Euphorbia esula manganese superoxide dismutase mRNA, complete cds Length = 1049 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 307 cagagcgccatcaaattcaacggcgg 332 |||||||||||||||||||| ||||| Sbjct: 322 cagagcgccatcaaattcaatggcgg 347
>gb|BC066063.1| Mus musculus superoxide dismutase 2, mitochondrial, mRNA (cDNA clone MGC:90127 IMAGE:6849521), complete cds Length = 4089 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 132 ctcccagacctgccttacgactatggcgcgctggagcc 169
>emb|AL935299.11| Zebrafish DNA sequence from clone DKEY-38M5, complete sequence Length = 229574 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacacc 32 |||||||||||||||||||||| Sbjct: 42325 cacgcgcacacacacgcacacc 42304
>gb|L35525.1|MUSMNSOD01 Mus musculus manganese superoxide dismutase (MnSOD) gene, exons 1-2 and 5' flank Length = 2254 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Plus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 1976 ctcccagacctgccttacgactatggcgcgctggagcc 2013
>emb|AL589878.12| Mouse DNA sequence from clone RP23-351C7 on chromosome 15, complete sequence Length = 203949 Score = 44.1 bits (22), Expect = 1.2 Identities = 34/38 (89%) Strand = Plus / Minus Query: 136 ctccccgacctcccctacgactacggcgcgctggagcc 173 ||||| ||||| || |||||||| |||||||||||||| Sbjct: 28404 ctcccagacctgccttacgactatggcgcgctggagcc 28367
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 aagcaccacgccacctacgtc 231 ||||||||||||||||||||| Sbjct: 5566008 aagcaccacgccacctacgtc 5566028
>gb|CP000480.1| Mycobacterium smegmatis str. MC2 155, complete genome Length = 6988209 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 aagcaccacgccacctacgtc 231 ||||||||||||||||||||| Sbjct: 6687000 aagcaccacgccacctacgtc 6686980
>gb|CP000479.1| Mycobacterium avium 104, complete genome Length = 5475491 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 aagcaccacgccacctacgtc 231 ||||||||||||||||||||| Sbjct: 176216 aagcaccacgccacctacgtc 176196
>gb|AC183988.2| Pan troglodytes BAC clone CH251-191O21 from chromosome 4, complete sequence Length = 148246 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cacacacacgcacaccagaga 37 ||||||||||||||||||||| Sbjct: 87661 cacacacacgcacaccagaga 87641
>ref|NM_031199.2| Mus musculus transforming growth factor alpha (Tgfa), mRNA Length = 3772 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 3277 cacgcgcacacacacgcacac 3297
>ref|XM_001225040.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_07385) mRNA, complete cds Length = 1344 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 238 tacaacaaggcgctcgagcagctcg 262 |||||||||| |||||||||||||| Sbjct: 184 tacaacaaggagctcgagcagctcg 208
>ref|NM_001050404.1| Oryza sativa (japonica cultivar-group) Os01g0679900 (Os01g0679900) mRNA, complete cds Length = 2824 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 659 cagcatctctgaaccttgtgg 679 ||||||||||||||||||||| Sbjct: 1845 cagcatctctgaaccttgtgg 1825
>emb|CR381673.8| Zebrafish DNA sequence from clone CH211-209J3 in linkage group 2, complete sequence Length = 209213 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 208468 cacgcgcacacacacgcacac 208488
>emb|CR847523.7| Zebrafish DNA sequence from clone DKEY-36I3 in linkage group 21, complete sequence Length = 148002 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 49394 cacgcgcacacacacgcacac 49414
>gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete sequence Length = 2646969 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 gcctggcgctcggcggcgcgc 112 ||||||||||||||||||||| Sbjct: 1326734 gcctggcgctcggcggcgcgc 1326754
>ref|XR_022647.1| PREDICTED: Pan troglodytes hypothetical protein LOC751019 (LOC751019), mRNA Length = 1479 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cacacacacgcacaccagaga 37 ||||||||||||||||||||| Sbjct: 319 cacacacacgcacaccagaga 299
>ref|XR_020017.1| PREDICTED: Pan troglodytes similar to ankyrin repeat domain 20A (LOC739750), mRNA Length = 2910 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cacacacacgcacaccagaga 37 ||||||||||||||||||||| Sbjct: 667 cacacacacgcacaccagaga 647
>ref|XR_017704.1| PREDICTED: Homo sapiens hypothetical LOC401131 (LOC401131), misc RNA Length = 6056 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cacacacacgcacaccagaga 37 ||||||||||||||||||||| Sbjct: 495 cacacacacgcacaccagaga 475
>gb|AC164633.3| Mus musculus chromosome 15, clone RP24-374C19, complete sequence Length = 157652 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 141858 cacgcgcacacacacgcacac 141838
>gb|DQ845159.1| Gadus morhua clone 90 microsatellite Gmo-G49 sequence Length = 226 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 116 cacgcgcacacacacgcacac 136
>gb|DQ845147.1| Gadus morhua clone 4 microsatellite Gmo-G24 sequence Length = 256 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 61 cacgcgcacacacacgcacac 81
>emb|CT573213.2| Frankia alni str. ACN14A chromosome, complete sequence Length = 7497934 Score = 42.1 bits (21), Expect = 4.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 199 ctgcaccaccagaagcaccacgccacctacgtc 231 ||||||||| | ||||||||||| ||||||||| Sbjct: 4706012 ctgcaccacgacaagcaccacgcgacctacgtc 4705980
>gb|AC115640.8| Rattus norvegicus BAC CH230-210B21 () complete sequence Length = 224129 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 17000 cacgcgcacacacacgcacac 16980
>emb|BX957292.10| Zebrafish DNA sequence from clone CH211-173M16 in linkage group 9, complete sequence Length = 123490 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 5414 cacgcgcacacacacgcacac 5434
>gb|AC160644.2| Gallus gallus BAC clone CH261-44N4 from chromosome unknown, complete sequence Length = 213618 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 812 tctgtcacatttggaggaaat 832 ||||||||||||||||||||| Sbjct: 207818 tctgtcacatttggaggaaat 207838
>ref|NM_198560.2| Homo sapiens lipoma HMGIC fusion partner-like 4 (LHFPL4), mRNA Length = 4895 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 2275 cacgcgcacacacacgcacac 2255
>gb|AC183595.3| Pan troglodytes BAC clone CH251-641G8 from chromosome 2, complete sequence Length = 211457 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cacacacacgcacaccagaga 37 ||||||||||||||||||||| Sbjct: 134156 cacacacacgcacaccagaga 134136
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 gtcgtccacctccagagcgcc 315 ||||||||||||||||||||| Sbjct: 2432401 gtcgtccacctccagagcgcc 2432421
>gb|AC182469.3| Pan troglodytes BAC clone CH251-496G17 from chromosome 4, complete sequence Length = 191618 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cacacacacgcacaccagaga 37 ||||||||||||||||||||| Sbjct: 147750 cacacacacgcacaccagaga 147730
>gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromosome 2, complete sequence Length = 179528 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 cacacacacgcacaccagaga 37 ||||||||||||||||||||| Sbjct: 69805 cacacacacgcacaccagaga 69825
>emb|CT571254.7| Mouse DNA sequence from clone RP23-335F6 on chromosome 12, complete sequence Length = 189879 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 68388 cacgcgcacacacacgcacac 68408
>gb|AC182471.3| Pan troglodytes BAC clone CH251-352M13 from chromosome unknown, complete sequence Length = 170022 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cacacacacgcacaccagaga 37 ||||||||||||||||||||| Sbjct: 43949 cacacacacgcacaccagaga 43929
>gb|AC167173.4| Mus musculus BAC clone RP23-30D21 from chromosome 3, complete sequence Length = 203513 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 23925 cacgcgcacacacacgcacac 23905 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 24011 cacgcgcacacacacgcacac 23991
>gb|AC160017.2| Mus musculus BAC clone RP23-172C19 from chromosome 9, complete sequence Length = 189417 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 188952 cacgcgcacacacacgcacac 188932
>gb|AC170598.2| Mus musculus BAC clone RP23-349D13 from chromosome 9, complete sequence Length = 217146 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 170096 cacgcgcacacacacgcacac 170116
>gb|AC154428.2| Mus musculus BAC clone RP24-200P20 from chromosome 16, complete sequence Length = 149867 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 2381 cacgcgcacacacacgcacac 2401
>gb|AC132347.4| Mus musculus BAC clone RP24-186F6 from chromosome 13, complete sequence Length = 155751 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 90406 cacgcgcacacacacgcacac 90386
>gb|AC120437.7| Mus musculus chromosome 5, clone RP24-571K14, complete sequence Length = 147493 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 95954 cacgcgcacacacacgcacac 95934
>gb|AY458111.1| Mycobacterium mucogenicum strain ATCC 49649 superoxide dismutase (sodA) gene, partial cds Length = 501 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ctacgactacggcgcgctggagccg 174 ||||||||||||||| ||||||||| Sbjct: 24 ctacgactacggcgccctggagccg 48
>gb|AY458110.1| Mycobacterium mucogenicum strain ATCC 49650 superoxide dismutase (sodA) gene, partial cds Length = 501 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ctacgactacggcgcgctggagccg 174 ||||||||||||||| ||||||||| Sbjct: 24 ctacgactacggcgccctggagccg 48
>gb|AY458109.1| Mycobacterium mucogenicum strain ATCC 49651 superoxide dismutase (sodA) gene, partial cds Length = 501 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 150 ctacgactacggcgcgctggagccg 174 ||||||||||||||| ||||||||| Sbjct: 24 ctacgactacggcgccctggagccg 48
>gb|AC111093.10| Mus musculus chromosome 3, clone RP23-170E22, complete sequence Length = 201202 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 41559 cacgcgcacacacacgcacac 41539
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 366520 cacgcgcacacacacgcacac 366500
>gb|AC160935.2| Mus musculus BAC clone RP23-456B7 from chromosome 9, complete sequence Length = 178690 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cacacacacgcacaccagaga 37 ||||||||||||||||||||| Sbjct: 62907 cacacacacgcacaccagaga 62887
>gb|AC096938.8| Rattus norvegicus 16 BAC CH230-49B24 (Children's Hospital Oakland Research Institute) complete sequence Length = 220401 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 121181 cacgcgcacacacacgcacac 121201 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 121317 cacgcgcacacacacgcacac 121337 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 121455 cacgcgcacacacacgcacac 121475
>ref|XM_585942.2| PREDICTED: Bos taurus similar to cryptochrome 2 (photolyase-like) (LOC509058), mRNA Length = 3873 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 1904 cacgcgcacacacacgcacac 1884
>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence Length = 211910 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 150918 cacgcgcacacacacgcacac 150898
>gb|AC107742.10| Mus musculus chromosome 15, clone RP23-331D7, complete sequence Length = 223952 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 165711 cacgcgcacacacacgcacac 165691
>gb|AC107763.25| Mus musculus chromosome 5, clone RP23-180F3, complete sequence Length = 219488 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 65939 cacgcgcacacacacgcacac 65959
>gb|AC124437.4| Mus musculus BAC clone RP24-257N6 from chromosome 3, complete sequence Length = 149145 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 91707 cacgcgcacacacacgcacac 91727
>gb|AC139335.3| Mus musculus BAC clone RP23-376N11 from chromosome 10, complete sequence Length = 195132 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 107410 cacgcgcacacacacgcacac 107390
>gb|AC136641.3| Mus musculus BAC clone RP23-313G19 from chromosome 7, complete sequence Length = 215208 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 cacacacacgcacaccagagaccaa 41 ||||||||| ||||||||||||||| Sbjct: 37156 cacacacacacacaccagagaccaa 37132
>gb|AC024239.7| Homo sapiens BAC clone RP11-419K23 from 7, complete sequence Length = 156658 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 20713 cacgcgcacacacacgcacac 20733
>gb|AC106745.4| Homo sapiens chromosome 16 clone RP11-134D3, complete sequence Length = 164238 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 44028 cacgcgcacacacacgcacac 44008
>gb|AC141481.4| Mus musculus BAC clone RP23-145E16 from chromosome 15, complete sequence Length = 195197 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 167810 cacgcgcacacacacgcacac 167830
>gb|AC126272.3| Mus musculus BAC clone RP23-48P22 from chromosome 14, complete sequence Length = 191606 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 120067 cacgcgcacacacacgcacac 120087
>gb|AC127595.3| Mus musculus BAC clone RP23-49I18 from chromosome 7, complete sequence Length = 239586 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 33918 cacgcgcacacacacgcacac 33898
>gb|AC136515.3| Mus musculus BAC clone RP23-212G1 from chromosome 7, complete sequence Length = 208084 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 cacacacacgcacaccagagaccaa 41 ||||||||| ||||||||||||||| Sbjct: 8178 cacacacacacacaccagagaccaa 8202
>gb|AC125381.4| Mus musculus BAC clone RP23-250N10 from chromosome 19, complete sequence Length = 155214 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 148270 cacgcgcacacacacgcacac 148290
>gb|AC125065.3| Mus musculus BAC clone RP23-430G6 from chromosome 5, complete sequence Length = 205734 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 109000 cacgcgcacacacacgcacac 109020 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 143257 cacgcgcacacacacgcacac 143237
>gb|AC131788.3| Mus musculus BAC clone RP24-440E10 from chromosome 7, complete sequence Length = 155587 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 130038 cacgcgcacacacacgcacac 130018
>gb|AC123945.4| Mus musculus BAC clone RP24-87G13 from chromosome 14, complete sequence Length = 207945 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1023 tagtattatttggtgctttta 1043 ||||||||||||||||||||| Sbjct: 100115 tagtattatttggtgctttta 100135
>gb|AC122451.3| Mus musculus BAC clone RP24-252G15 from 16, complete sequence Length = 160256 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 44161 cacgcgcacacacacgcacac 44181
>gb|AY231756.1| Drosophila yakuba clone yak-em_Sod2 mRNA sequence Length = 387 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 ctgcaccaccagaagcaccac 219 ||||||||||||||||||||| Sbjct: 106 ctgcaccaccagaagcaccac 126
>gb|AC139292.4| Mus musculus BAC clone RP24-279K6 from chromosome 3, complete sequence Length = 165051 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 84384 cacgcgcacacacacgcacac 84404 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 84470 cacgcgcacacacacgcacac 84490
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 79262 cacgcgcacacacacgcacac 79282
>gb|AY220523.1| Esox masquinongy clone Ema9 microsatellite sequence Length = 198 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 148 cacgcgcacacacacgcacac 128
>dbj|AK128193.1| Homo sapiens cDNA FLJ46320 fis, clone TESTI4042846 Length = 4084 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 3756 cacgcgcacacacacgcacac 3776
>gb|AC140322.4| Mus musculus BAC clone RP23-413F14 from chromosome 14, complete sequence Length = 205679 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 180781 cacgcgcacacacacgcacac 180761
>gb|DQ396619.1| Alexandrium tamarense microsatellite ATB1 sequence Length = 282 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 70 cacgcgcacacacacgcacac 50
>gb|AC138772.4| Homo sapiens BAC clone RP11-1345A16 from UL, complete sequence Length = 213227 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 cacacacacgcacaccagaga 37 ||||||||||||||||||||| Sbjct: 149512 cacacacacgcacaccagaga 149532
>gb|AC124909.3| Equus caballus clone CH241-91H15, complete sequence Length = 171421 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 cgcgcacacacacgcacacca 33 ||||||||||||||||||||| Sbjct: 94729 cgcgcacacacacgcacacca 94749
>gb|AC171140.2| Helobdella robusta clone CH306-1B2, complete sequence Length = 105143 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 46084 cacgcgcacacacacgcacac 46104
>gb|AC138771.4| Homo sapiens BAC clone RP11-1338E21 from UL, complete sequence Length = 157733 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 cacacacacgcacaccagaga 37 ||||||||||||||||||||| Sbjct: 11462 cacacacacgcacaccagaga 11442
>gb|AC161457.5| Mus musculus BAC clone RP23-156A3 from chromosome 16, complete sequence Length = 208176 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 174294 cacgcgcacacacacgcacac 174314
>gb|BC018486.1| Mus musculus cDNA clone IMAGE:3597276 Length = 2097 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 1780 cacgcgcacacacacgcacac 1760
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 4.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 199 ctgcaccaccagaagcaccacgccacctacgtc 231 ||||||||| | ||||||||||| ||||||||| Sbjct: 3318445 ctgcaccacgacaagcaccacgcgacctacgtc 3318413
>emb|CR762425.5| Zebrafish DNA sequence from clone CH211-181P1 in linkage group 18, complete sequence Length = 145468 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 481 cacgcgcacacacacgcacac 501
>gb|AF333434.2| Mycobacterium avium subsp. paratuberculosis superoxide dismutase gene, complete cds Length = 657 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 aagcaccacgccacctacgtc 231 ||||||||||||||||||||| Sbjct: 124 aagcaccacgccacctacgtc 144
>gb|AC161369.3| Mus musculus BAC clone RP23-426C11 from chromosome 3, complete sequence Length = 202655 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 156646 cacgcgcacacacacgcacac 156626 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 156732 cacgcgcacacacacgcacac 156712
>gb|AC112487.3| Homo sapiens 3 BAC RP11-90K6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 80000 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 57756 cacgcgcacacacacgcacac 57776
>dbj|AK162680.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930016D10 product:transforming growth factor alpha, full insert sequence Length = 4184 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 3207 cacgcgcacacacacgcacac 3227
>gb|AF439936.5| Talaromyces emersonii cellobiohydrolase II (cbhII) gene, complete cds Length = 2369 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 219 cgccacctacgtcgccaactacaac 243 ||||||| ||||||||||||||||| Sbjct: 1815 cgccaccaacgtcgccaactacaac 1839
>emb|AL844597.12| Zebrafish DNA sequence from clone DKEY-9M10 in linkage group 10, complete sequence Length = 78650 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 68880 cacgcgcacacacacgcacac 68900
>emb|BX640403.5| Zebrafish DNA sequence from clone CH211-133D22 in linkage group 10, complete sequence Length = 163035 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 62799 cacgcgcacacacacgcacac 62819
>emb|BX927336.18| Zebrafish DNA sequence from clone CH211-215P11 in linkage group 5, complete sequence Length = 200686 Score = 42.1 bits (21), Expect = 4.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 cacgcgcacacacacgcacac 31 ||||||||||||||||||||| Sbjct: 77223 cacgcgcacacacacgcacac 77203
>emb|CR380838.2| Pan troglodytes chromosome X BAC RP43-021E02, complete sequence Length = 205764 Score = 42.1 bits (21), Expect = 4.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 9 tccacgcgcacacacacgcacacca 33 ||||||||||||||||| ||||||| Sbjct: 50833 tccacgcgcacacacacacacacca 50857 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 210,272,632 Number of extensions: 11697333 Number of successful extensions: 311162 Number of sequences better than 10.0: 419 Number of HSP's gapped: 311141 Number of HSP's successfully gapped: 456 Length of query: 1250 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1227 Effective length of database: 18,503,978,556 Effective search space: 22704381688212 Effective search space used: 22704381688212 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)