ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf54p08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os11g0583200:Os11g0583200 | 28 | 8.4 | 2 | AK072326:Os12g0281600 | 28 | 8.4 | 3 | AF366556:Os04g0670200 | 28 | 8.5 | 4 | D90407:Os04g0670200 | 28 | 8.5 | 5 | AK109371:Os04g0670200 | 28 | 8.5 | 6 | AK103172:Os08g0525600 | 28 | 8.5 | 7 | AK099358:Os04g0670200 | 28 | 8.5 | 8 | AK073373:Os04g0670200 | 28 | 8.5 | 9 | AK065637:Os06g0111600 | 28 | 8.5 |
|---|
>Os11g0583200:Os11g0583200 | Length = 703 Score = 27.7 bits (60), Expect = 8.4 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 10/82 (12%) Frame = +3 Query: 333 SFPPKSQM--TCHSLIQSLPRFRIQSVVRCGA------TGQIR--RNXXXXXXXXXSVNL 482 S PP+S + HSL + V C A TG+++ R+ V Sbjct: 129 SAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPNRNVVAW 188 Query: 483 ESLLCDAVMRERPLESVRCFFG 548 +++ +AV+ RPLE++ +FG Sbjct: 189 NAVMTNAVLDGRPLETIEAYFG 210
>AK072326:Os12g0281600 | Length = 1116 Score = 27.7 bits (60), Expect = 8.4 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +3 Query: 594 LRSCCHLWSLN-RFCDIVRSSNHLCDIMLVWSLRWSSI 704 LR C L L+ C S +HL DI +W+LR+ SI Sbjct: 606 LRKCKLLRVLDLEQCTTALSDDHLADICKLWNLRYLSI 643
>AF366556:Os04g0670200 | Length = 122 Score = 27.7 bits (60), Expect = 8.5 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +1 Query: 43 NLPKSKP*RAPFGLPPKPQISPSHAMDDDFDIPA 144 N PK P P P P +P H DD+F PA Sbjct: 19 NPPKPSP-TPPTPPTPPPPSAPDHVCDDNFSCPA 51
>D90407:Os04g0670200 | Length = 466 Score = 27.7 bits (60), Expect = 8.5 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +1 Query: 43 NLPKSKP*RAPFGLPPKPQISPSHAMDDDFDIPA 144 N PK P P P P +P H DD+F PA Sbjct: 362 NPPKPSP-TPPTPPTPPPPSAPDHVCDDNFSCPA 394
>AK109371:Os04g0670200 | Length = 500 Score = 27.7 bits (60), Expect = 8.5 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +1 Query: 43 NLPKSKP*RAPFGLPPKPQISPSHAMDDDFDIPA 144 N PK P P P P +P H DD+F PA Sbjct: 396 NPPKPSP-TPPTPPTPPPPSAPDHVCDDNFSCPA 428
>AK103172:Os08g0525600 | Length = 580 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/11 (90%), Positives = 11/11 (100%) Frame = +1 Query: 277 WDTPEVGDEVE 309 W+TPEVGDEVE Sbjct: 58 WETPEVGDEVE 68
>AK099358:Os04g0670200 | Length = 466 Score = 27.7 bits (60), Expect = 8.5 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +1 Query: 43 NLPKSKP*RAPFGLPPKPQISPSHAMDDDFDIPA 144 N PK P P P P +P H DD+F PA Sbjct: 362 NPPKPSP-TPPTPPTPPPPSAPDHVCDDNFSCPA 394
>AK073373:Os04g0670200 | Length = 466 Score = 27.7 bits (60), Expect = 8.5 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +1 Query: 43 NLPKSKP*RAPFGLPPKPQISPSHAMDDDFDIPA 144 N PK P P P P +P H DD+F PA Sbjct: 362 NPPKPSP-TPPTPPTPPPPSAPDHVCDDNFSCPA 394
>AK065637:Os06g0111600 | Length = 1054 Score = 27.7 bits (60), Expect = 8.5 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -2 Query: 717 SNNERCLTTSRTRLA*CHINGWNFGQCHRNDSGSTDDSMSEAVCN 583 SN+ + S L C + W+ G+C+R G D E VC+ Sbjct: 639 SNDRNSVDVSPWILNFCLVKKWSIGRCNRFMHGYEDKLQIEDVCS 683 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 16,671,473 Number of extensions: 315847 Number of successful extensions: 942 Number of sequences better than 10.0: 9 Number of HSP's gapped: 942 Number of HSP's successfully gapped: 9 Length of query: 245 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 147 Effective length of database: 11,475,837 Effective search space: 1686948039 Effective search space used: 1686948039 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
