ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58j08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK100119:Os05g0593100 | 618 | e-177 | 2 | AK061855:Os05g0593100 | 618 | e-177 | 3 | AY224442:Os05g0593100 | 587 | e-167 | 4 | AK067475:Os04g0550400 | 30 | 3.7 | 5 | Os09g0528700:Os09g0528700 | 30 | 6.4 | 6 | AY453405:Os12g0263000 | 29 | 8.3 | 7 | AK099555:Os12g0263000 | 29 | 8.3 |
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>AK100119:Os05g0593100 | Length = 377 Score = 618 bits (1594), Expect = e-177 Identities = 311/380 (81%), Positives = 334/380 (87%) Frame = +3 Query: 171 MATRYWIAALPVADDNVAAGKTALWARLQEAISRHSFDTPLYRFTVPDLRPGTXXXXXXX 350 MATRYWI +LPV A +LWARLQ++ISRHSFDTPLYRF VPDLR GT Sbjct: 1 MATRYWIVSLPVQTPGSTAN--SLWARLQDSISRHSFDTPLYRFNVPDLRVGTLDSLLAL 58 Query: 351 XXXXVKSNIFIEGVSHKIRRQIEDLERAGGVEPGTLTVDGVPVDSYLTRFVWDEGKYPVN 530 VKSN+FIEGVSHKIRRQIE+LERAGGVE G LTVDGVPVD+YLTRFVWDEGKYP Sbjct: 59 SDDLVKSNVFIEGVSHKIRRQIEELERAGGVESGALTVDGVPVDTYLTRFVWDEGKYPTM 118 Query: 531 APLKETVASIQSQVAKIEDDMKVRVAEYGNVKSQLGAINRKQTGSLAVRDLSNLIKPEDM 710 +PLKE V SIQSQV+KIEDDMKVR AEY NV+SQL AINRKQTGSLAVRDLSNL+KPEDM Sbjct: 119 SPLKEIVGSIQSQVSKIEDDMKVRGAEYNNVRSQLSAINRKQTGSLAVRDLSNLVKPEDM 178 Query: 711 VTSEHLVTLLSIVPKYSQKDWLASYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDN 890 VTSEHLVTLL++VPKYSQKDWL+SYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDN Sbjct: 179 VTSEHLVTLLAVVPKYSQKDWLSSYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDN 238 Query: 891 FKVHAREKGFQIRDFEYSPEAQESRKQELEKLLQDQEVMRTSLLQWCYASYSEVFSSWMH 1070 FKV AREKGFQ+RDFEYS EAQESRK+ELEKL+QDQE MR SLLQWCYASYSEVFSSWMH Sbjct: 239 FKVRAREKGFQVRDFEYSSEAQESRKEELEKLMQDQEAMRASLLQWCYASYSEVFSSWMH 298 Query: 1071 FSAVRVFVESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSSYWRSEDDVGMA 1250 F AVRVFVESILRYGLP FLS VLAPS K EKKVR+ILE LCGN +S YW+SEDDVG+ Sbjct: 299 FCAVRVFVESILRYGLPPSFLSAVLAPSQKGEKKVRSILEELCGNVHSIYWKSEDDVGV- 357 Query: 1251 AGLGGETESHPYVSFTINFV 1310 AGLGGETE+HPYVSFTINF+ Sbjct: 358 AGLGGETEAHPYVSFTINFI 377
>AK061855:Os05g0593100 | Length = 407 Score = 618 bits (1594), Expect = e-177 Identities = 311/380 (81%), Positives = 334/380 (87%) Frame = +3 Query: 171 MATRYWIAALPVADDNVAAGKTALWARLQEAISRHSFDTPLYRFTVPDLRPGTXXXXXXX 350 MATRYWI +LPV A +LWARLQ++ISRHSFDTPLYRF VPDLR GT Sbjct: 31 MATRYWIVSLPVQTPGSTAN--SLWARLQDSISRHSFDTPLYRFNVPDLRVGTLDSLLAL 88 Query: 351 XXXXVKSNIFIEGVSHKIRRQIEDLERAGGVEPGTLTVDGVPVDSYLTRFVWDEGKYPVN 530 VKSN+FIEGVSHKIRRQIE+LERAGGVE G LTVDGVPVD+YLTRFVWDEGKYP Sbjct: 89 SDDLVKSNVFIEGVSHKIRRQIEELERAGGVESGALTVDGVPVDTYLTRFVWDEGKYPTM 148 Query: 531 APLKETVASIQSQVAKIEDDMKVRVAEYGNVKSQLGAINRKQTGSLAVRDLSNLIKPEDM 710 +PLKE V SIQSQV+KIEDDMKVR AEY NV+SQL AINRKQTGSLAVRDLSNL+KPEDM Sbjct: 149 SPLKEIVGSIQSQVSKIEDDMKVRGAEYNNVRSQLSAINRKQTGSLAVRDLSNLVKPEDM 208 Query: 711 VTSEHLVTLLSIVPKYSQKDWLASYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDN 890 VTSEHLVTLL++VPKYSQKDWL+SYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDN Sbjct: 209 VTSEHLVTLLAVVPKYSQKDWLSSYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDN 268 Query: 891 FKVHAREKGFQIRDFEYSPEAQESRKQELEKLLQDQEVMRTSLLQWCYASYSEVFSSWMH 1070 FKV AREKGFQ+RDFEYS EAQESRK+ELEKL+QDQE MR SLLQWCYASYSEVFSSWMH Sbjct: 269 FKVRAREKGFQVRDFEYSSEAQESRKEELEKLMQDQEAMRASLLQWCYASYSEVFSSWMH 328 Query: 1071 FSAVRVFVESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSSYWRSEDDVGMA 1250 F AVRVFVESILRYGLP FLS VLAPS K EKKVR+ILE LCGN +S YW+SEDDVG+ Sbjct: 329 FCAVRVFVESILRYGLPPSFLSAVLAPSQKGEKKVRSILEELCGNVHSIYWKSEDDVGV- 387 Query: 1251 AGLGGETESHPYVSFTINFV 1310 AGLGGETE+HPYVSFTINF+ Sbjct: 388 AGLGGETEAHPYVSFTINFI 407
>AY224442:Os05g0593100 | Length = 390 Score = 587 bits (1512), Expect = e-167 Identities = 297/364 (81%), Positives = 318/364 (87%) Frame = +3 Query: 171 MATRYWIAALPVADDNVAAGKTALWARLQEAISRHSFDTPLYRFTVPDLRPGTXXXXXXX 350 MATRYWI +LPV A +LWARLQ++ISRHSFDTPLYRF VPDLR GT Sbjct: 30 MATRYWIVSLPVQTPGSTAN--SLWARLQDSISRHSFDTPLYRFNVPDLRVGTLDSLLAL 87 Query: 351 XXXXVKSNIFIEGVSHKIRRQIEDLERAGGVEPGTLTVDGVPVDSYLTRFVWDEGKYPVN 530 VKSN+FIEGVSHKIRRQIE+LERAGGVE G LTVDGVPVD+YLTRFVWDEGKYP Sbjct: 88 SDDLVKSNVFIEGVSHKIRRQIEELERAGGVESGALTVDGVPVDTYLTRFVWDEGKYPTM 147 Query: 531 APLKETVASIQSQVAKIEDDMKVRVAEYGNVKSQLGAINRKQTGSLAVRDLSNLIKPEDM 710 +PLKE V SIQSQV+KIEDDMKVR AEY NV+SQL AINRKQTGSLAVRDLSNL+KPEDM Sbjct: 148 SPLKEIVGSIQSQVSKIEDDMKVRGAEYNNVRSQLSAINRKQTGSLAVRDLSNLVKPEDM 207 Query: 711 VTSEHLVTLLSIVPKYSQKDWLASYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDN 890 VTSEHLVTLL++VPKYSQKDWL+SYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDN Sbjct: 208 VTSEHLVTLLAVVPKYSQKDWLSSYESLDTFVVPRSSKKLYEDNEYALYTVTLFAKVVDN 267 Query: 891 FKVHAREKGFQIRDFEYSPEAQESRKQELEKLLQDQEVMRTSLLQWCYASYSEVFSSWMH 1070 FKV AREKGFQ+RDFEYS EAQESRK+ELEKL+QDQE MR SLLQWCYASYSEVFSSWMH Sbjct: 268 FKVRAREKGFQVRDFEYSSEAQESRKEELEKLMQDQEAMRASLLQWCYASYSEVFSSWMH 327 Query: 1071 FSAVRVFVESILRYGLPARFLSVVLAPSTKSEKKVRNILEGLCGNTNSSYWRSEDDVGMA 1250 F AVRVFVESILRYGLP FLS VLAPS K EKKVR+ILE LCGN +S YW+SEDDVG+ Sbjct: 328 FCAVRVFVESILRYGLPPSFLSAVLAPSQKGEKKVRSILEELCGNVHSIYWKSEDDVGV- 386 Query: 1251 AGLG 1262 AGLG Sbjct: 387 AGLG 390
>AK067475:Os04g0550400 | Length = 489 Score = 30.4 bits (67), Expect = 3.7 Identities = 33/162 (20%), Positives = 70/162 (43%), Gaps = 8/162 (4%) Frame = +3 Query: 540 KETVASIQSQVAKIEDDMKVRVAEYGNVKSQLGAINRKQTGSLAVR----DLSNLIKPED 707 +++ A +++ ++++++ +E +L A+ ++ + R L N PED Sbjct: 220 RDSSARKRAEHRRLKEELASAASELEETNYKLAALKAQRDNTQGARIPYPTLGNKNMPED 279 Query: 708 MVTSEHLVTLLSIVPKYSQKDWLASYESLDTFVVPR--SSKKLYEDNEYALYTVTLFAKV 881 V + + +D A+++ L + R K+L+E+ L + F + Sbjct: 280 KVRDK----------QREMQDLEATHKELSELISKRLVEIKRLHEERIEILNKIATFQNI 329 Query: 882 VDNFKVHAREKGFQ-IRDFEYSPEAQESRKQE-LEKLLQDQE 1001 + +FK K FQ + D +A+ Q LEKL D++ Sbjct: 330 LMDFKSIRSSKAFQLVNDRLQKSQAELDHYQTLLEKLQVDKD 371
>Os09g0528700:Os09g0528700 | Length = 553 Score = 29.6 bits (65), Expect = 6.4 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -2 Query: 70 WWWKRQRRRGHVC 32 WWW R+RRRG C Sbjct: 61 WWWTRRRRRGSPC 73
>AY453405:Os12g0263000 | Length = 426 Score = 29.3 bits (64), Expect = 8.3 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +3 Query: 402 IRRQIEDLERAGGVEP-GTLTVDGVPVDSYLTRFVWDEGKYPVNA 533 IR+ + ++ G + P GTLT+DG+PV R + YP A Sbjct: 190 IRKTMAAIDAEGELRPDGTLTIDGLPVAVVYFRAGYTPNDYPSEA 234
>AK099555:Os12g0263000 | Length = 274 Score = 29.3 bits (64), Expect = 8.3 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +3 Query: 402 IRRQIEDLERAGGVEP-GTLTVDGVPVDSYLTRFVWDEGKYPVNA 533 IR+ + ++ G + P GTLT+DG+PV R + YP A Sbjct: 134 IRKTMAAIDAEGELRPDGTLTIDGLPVAVVYFRAGYTPNDYPSEA 178 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 39,883,393 Number of extensions: 871632 Number of successful extensions: 3052 Number of sequences better than 10.0: 7 Number of HSP's gapped: 3044 Number of HSP's successfully gapped: 7 Length of query: 536 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 431 Effective length of database: 11,195,550 Effective search space: 4825282050 Effective search space used: 4825282050 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
