ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf58j07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK062476:Os04g0165600 142 1e-33
2AK106677:Os11g0620000 65 3e-10
3Os03g0147900:Os03g0147900 58 2e-08
4AK066708: 44 4e-04
5AK104417:Os04g0102600 41 0.003
6AK120096:Os09g0453400 37 0.059
7AK069581:Os03g0765200 33 0.85
8AK067325:Os02g0267000 33 0.85
9AK073880:Os09g0456100 30 9.4
10AK072474:Os09g0456100 30 9.4

>AK062476:Os04g0165600 |
          Length = 164
 Score =  142 bits (358), Expect = 1e-33
 Identities = 71/128 (55%), Positives = 85/128 (66%), Gaps = 3/128 (2%)
 Frame = +2

Query: 158 WAALRPVVKACIGGSLIGITISDRYFSFATVHGGSMRPTFEGSTDGREYALVKRSPL--- 328
           W  LR  ++ C+ G+L+ +T++DRY S  TV G SM PT E     R  ALV R  L   
Sbjct: 5   WPLLRSFLRNCVAGTLVVVTVNDRYASVITVRGTSMNPTLESQQGDR--ALVSRLCLDAR 62

Query: 329 YDYCRGEVVVFVSPVDHRSPAIKRLIGLPGDWISVRDKEEIRKIPEGHCWVEGDNGSASW 508
           Y   RG+VVVF SP +HRS  +KRLI LPGDWI V   +EIR+IP GHCWVEGDN   SW
Sbjct: 63  YGLSRGDVVVFRSPTEHRSLLVKRLIALPGDWIQVPAAQEIRQIPVGHCWVEGDNPDVSW 122

Query: 509 DSRSYGPV 532
           DSRSYGP+
Sbjct: 123 DSRSYGPI 130



 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 23/34 (67%), Positives = 31/34 (91%)
 Frame = +3

Query: 1743 VPLGLVQGRVTHVVWPPGKMGRVDKKVPPEGRVM 1844
            +PLGL+QGRVTH+VWPP ++G V++K+ PEGRVM
Sbjct: 130  IPLGLMQGRVTHIVWPPNRIGPVERKM-PEGRVM 162



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>AK106677:Os11g0620000 |
          Length = 174

 Score = 64.7 bits (156), Expect = 3e-10
 Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
 Frame = +2

Query: 236 SFATVHGGSMRPTFEGSTDGREYALVKRSPLYDYCRGEVVVFVSPVDHRSPAIKRLIGLP 415
           SFA V G SM P    + D     LV  + L     G+ V+ VSP + R   +KR++G+ 
Sbjct: 43  SFALVMGPSMLPAMNLAGDVVAVDLVS-ARLGRVASGDAVLLVSPENPRKAVVKRVVGME 101

Query: 416 GDWISV------RDKEEIRKIPEGHCWVEGDNGSASWDSRSYGPV 532
           GD ++        D  +   +P+GH WV+GDN  AS DSR +GPV
Sbjct: 102 GDAVTFLVDPGNSDASKTVVVPKGHVWVQGDNIYASRDSRQFGPV 146



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>Os03g0147900:Os03g0147900 |
          Length = 70

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = +2

Query: 446 EIRKIPEGHCWVEGDNGSASWDSRSYGPV 532
           +I KIPEGHCWVEGDN + SWDSRS+GP+
Sbjct: 8   DIIKIPEGHCWVEGDNAACSWDSRSFGPI 36



 Score = 54.3 bits (129), Expect = 4e-07
 Identities = 22/35 (62%), Positives = 29/35 (82%)
 Frame = +3

Query: 1743 VPLGLVQGRVTHVVWPPGKMGRVDKKVPPEGRVMP 1847
            +PLGL++GRV HV+WPP K+GRVD K+ PE R+ P
Sbjct: 36   IPLGLIKGRVAHVIWPPSKIGRVDTKM-PENRISP 69



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>AK066708: |
          Length = 211

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 28/91 (30%)
 Frame = +2

Query: 344 GEVVVFVSP-------VDHRSPAIKRLIGLPGDWISVRDKE------------------- 445
           G++V F  P       V+     IKR++  PGD+I VR  +                   
Sbjct: 102 GDIVFFKVPTTLQNYGVNKDVVFIKRILATPGDFIEVRQGQLIINGVARKEHYTASHASY 161

Query: 446 --EIRKIPEGHCWVEGDNGSASWDSRSYGPV 532
             E  ++PEGH +V GDN + S DSR++GP+
Sbjct: 162 TMEAMRLPEGHVFVMGDNRNNSCDSRAWGPL 192



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>AK104417:Os04g0102600 |
          Length = 206

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
 Frame = +2

Query: 254 GGSMRPTFEGSTDGREYA--LVKRSPLYDYCRGEVVVFVSPVDHRSPAIKRLIGLPG-DW 424
           GG      E +T G      LV  SP   +  G+VV+   P       ++RL  L G + 
Sbjct: 57  GGEAMAPIESTTGGTLLVRKLVNLSPTQVFV-GDVVLLKDPEKSDDLIVRRLAALEGYEM 115

Query: 425 ISVRDKEEIRKIPEGHCWVEGDNGS----ASWDSRSYGPVSNTFLL 550
           +S  +K+E   + +  CWV  DN S     + DSR +GPV  T +L
Sbjct: 116 VSNDEKDEPFVLDKDQCWVLADNQSLKPKEARDSRLFGPVPMTDIL 161



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>AK120096:Os09g0453400 |
          Length = 411

 Score = 37.0 bits (84), Expect = 0.059
 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 21/68 (30%)
 Frame = +2

Query: 392 IKRLIGLPGDWISVRDKE---------------------EIRKIPEGHCWVEGDNGSASW 508
           IKR++   GD++ VRD +                     E   +PEG+ +V GDN + S+
Sbjct: 308 IKRVVAKAGDYVEVRDGKLIVNGVVQDEEFVLEPHNYEMEPMLVPEGYVFVLGDNRNNSF 367

Query: 509 DSRSYGPV 532
           DS ++GP+
Sbjct: 368 DSHNWGPL 375



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>AK069581:Os03g0765200 |
          Length = 470

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 21/68 (30%)
 Frame = +2

Query: 392 IKRLIGLPGDWISVRDKEEIRK---------------------IPEGHCWVEGDNGSASW 508
           IKR++   GD + VRD + +                       +P+G+ +V GDN + S+
Sbjct: 380 IKRIVAKGGDTVEVRDGKLLVNGVVQDEEFVLEPLNYEMDQVTVPQGYVFVLGDNRNNSF 439

Query: 509 DSRSYGPV 532
           DS ++GP+
Sbjct: 440 DSHNWGPL 447



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>AK067325:Os02g0267000 |
          Length = 298

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 35/151 (23%)
 Frame = +2

Query: 203 LIGITISDRYFSFAT----VHGGSMRPTFEGSTDGREYALVKRSPLYDY---CRGEVVVF 361
           L  I IS  + SF      +   SM PTF+         +V     Y +   C  ++V+F
Sbjct: 116 LAAIAISLAFRSFVAEPRFIPSLSMFPTFDVGD-----RIVAEKVTYYFRKPCINDIVIF 170

Query: 362 VSP-------VDHRSPAIKRLIGLPGDWISVRDKE-----EIR----------------K 457
            SP              IKR++   GD + V   +     E+R                +
Sbjct: 171 KSPPVLQEVGYTDNDVFIKRIVAREGDVVEVHKGKLVVNGEVRNEEFILEPPSYDMNPVQ 230

Query: 458 IPEGHCWVEGDNGSASWDSRSYGPVSNTFLL 550
           +PE   +V GDN + S+DS  +GP+ +  +L
Sbjct: 231 VPENSVFVMGDNRNNSYDSHVWGPLPSKNIL 261



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>AK073880:Os09g0456100 |
          Length = 514

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -2

Query: 1542 KRTSNLTVHGQIASVQETGVAGCFLCYKF 1456
            KRTS+L  +GQI+S     ++GCF C+ F
Sbjct: 491  KRTSHLNKNGQISS-----LSGCFTCHAF 514



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>AK072474:Os09g0456100 |
          Length = 620

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = -2

Query: 1542 KRTSNLTVHGQIASVQETGVAGCFLCYKF 1456
            KRTS+L  +GQI+S     ++GCF C+ F
Sbjct: 597  KRTSHLNKNGQISS-----LSGCFTCHAF 620


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 56,754,133
Number of extensions: 1261384
Number of successful extensions: 3377
Number of sequences better than 10.0: 10
Number of HSP's gapped: 3370
Number of HSP's successfully gapped: 12
Length of query: 747
Length of database: 15,399,855
Length adjustment: 108
Effective length of query: 639
Effective length of database: 11,075,427
Effective search space: 7077197853
Effective search space used: 7077197853
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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