| Clone Name | FLbaf58j07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK062476:Os04g0165600 | 142 | 1e-33 | 2 | AK106677:Os11g0620000 | 65 | 3e-10 | 3 | Os03g0147900:Os03g0147900 | 58 | 2e-08 | 4 | AK066708: | 44 | 4e-04 | 5 | AK104417:Os04g0102600 | 41 | 0.003 | 6 | AK120096:Os09g0453400 | 37 | 0.059 | 7 | AK069581:Os03g0765200 | 33 | 0.85 | 8 | AK067325:Os02g0267000 | 33 | 0.85 | 9 | AK073880:Os09g0456100 | 30 | 9.4 | 10 | AK072474:Os09g0456100 | 30 | 9.4 |
|---|
>AK062476:Os04g0165600 | Length = 164 Score = 142 bits (358), Expect = 1e-33 Identities = 71/128 (55%), Positives = 85/128 (66%), Gaps = 3/128 (2%) Frame = +2 Query: 158 WAALRPVVKACIGGSLIGITISDRYFSFATVHGGSMRPTFEGSTDGREYALVKRSPL--- 328 W LR ++ C+ G+L+ +T++DRY S TV G SM PT E R ALV R L Sbjct: 5 WPLLRSFLRNCVAGTLVVVTVNDRYASVITVRGTSMNPTLESQQGDR--ALVSRLCLDAR 62 Query: 329 YDYCRGEVVVFVSPVDHRSPAIKRLIGLPGDWISVRDKEEIRKIPEGHCWVEGDNGSASW 508 Y RG+VVVF SP +HRS +KRLI LPGDWI V +EIR+IP GHCWVEGDN SW Sbjct: 63 YGLSRGDVVVFRSPTEHRSLLVKRLIALPGDWIQVPAAQEIRQIPVGHCWVEGDNPDVSW 122 Query: 509 DSRSYGPV 532 DSRSYGP+ Sbjct: 123 DSRSYGPI 130 Score = 55.1 bits (131), Expect = 2e-07 Identities = 23/34 (67%), Positives = 31/34 (91%) Frame = +3 Query: 1743 VPLGLVQGRVTHVVWPPGKMGRVDKKVPPEGRVM 1844 +PLGL+QGRVTH+VWPP ++G V++K+ PEGRVM Sbjct: 130 IPLGLMQGRVTHIVWPPNRIGPVERKM-PEGRVM 162
>AK106677:Os11g0620000 | Length = 174 Score = 64.7 bits (156), Expect = 3e-10 Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 6/105 (5%) Frame = +2 Query: 236 SFATVHGGSMRPTFEGSTDGREYALVKRSPLYDYCRGEVVVFVSPVDHRSPAIKRLIGLP 415 SFA V G SM P + D LV + L G+ V+ VSP + R +KR++G+ Sbjct: 43 SFALVMGPSMLPAMNLAGDVVAVDLVS-ARLGRVASGDAVLLVSPENPRKAVVKRVVGME 101 Query: 416 GDWISV------RDKEEIRKIPEGHCWVEGDNGSASWDSRSYGPV 532 GD ++ D + +P+GH WV+GDN AS DSR +GPV Sbjct: 102 GDAVTFLVDPGNSDASKTVVVPKGHVWVQGDNIYASRDSRQFGPV 146
>Os03g0147900:Os03g0147900 | Length = 70 Score = 58.2 bits (139), Expect = 2e-08 Identities = 22/29 (75%), Positives = 26/29 (89%) Frame = +2 Query: 446 EIRKIPEGHCWVEGDNGSASWDSRSYGPV 532 +I KIPEGHCWVEGDN + SWDSRS+GP+ Sbjct: 8 DIIKIPEGHCWVEGDNAACSWDSRSFGPI 36 Score = 54.3 bits (129), Expect = 4e-07 Identities = 22/35 (62%), Positives = 29/35 (82%) Frame = +3 Query: 1743 VPLGLVQGRVTHVVWPPGKMGRVDKKVPPEGRVMP 1847 +PLGL++GRV HV+WPP K+GRVD K+ PE R+ P Sbjct: 36 IPLGLIKGRVAHVIWPPSKIGRVDTKM-PENRISP 69
>AK066708: | Length = 211 Score = 44.3 bits (103), Expect = 4e-04 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 28/91 (30%) Frame = +2 Query: 344 GEVVVFVSP-------VDHRSPAIKRLIGLPGDWISVRDKE------------------- 445 G++V F P V+ IKR++ PGD+I VR + Sbjct: 102 GDIVFFKVPTTLQNYGVNKDVVFIKRILATPGDFIEVRQGQLIINGVARKEHYTASHASY 161 Query: 446 --EIRKIPEGHCWVEGDNGSASWDSRSYGPV 532 E ++PEGH +V GDN + S DSR++GP+ Sbjct: 162 TMEAMRLPEGHVFVMGDNRNNSCDSRAWGPL 192
>AK104417:Os04g0102600 | Length = 206 Score = 41.2 bits (95), Expect = 0.003 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 7/106 (6%) Frame = +2 Query: 254 GGSMRPTFEGSTDGREYA--LVKRSPLYDYCRGEVVVFVSPVDHRSPAIKRLIGLPG-DW 424 GG E +T G LV SP + G+VV+ P ++RL L G + Sbjct: 57 GGEAMAPIESTTGGTLLVRKLVNLSPTQVFV-GDVVLLKDPEKSDDLIVRRLAALEGYEM 115 Query: 425 ISVRDKEEIRKIPEGHCWVEGDNGS----ASWDSRSYGPVSNTFLL 550 +S +K+E + + CWV DN S + DSR +GPV T +L Sbjct: 116 VSNDEKDEPFVLDKDQCWVLADNQSLKPKEARDSRLFGPVPMTDIL 161
>AK120096:Os09g0453400 | Length = 411 Score = 37.0 bits (84), Expect = 0.059 Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 21/68 (30%) Frame = +2 Query: 392 IKRLIGLPGDWISVRDKE---------------------EIRKIPEGHCWVEGDNGSASW 508 IKR++ GD++ VRD + E +PEG+ +V GDN + S+ Sbjct: 308 IKRVVAKAGDYVEVRDGKLIVNGVVQDEEFVLEPHNYEMEPMLVPEGYVFVLGDNRNNSF 367 Query: 509 DSRSYGPV 532 DS ++GP+ Sbjct: 368 DSHNWGPL 375
>AK069581:Os03g0765200 | Length = 470 Score = 33.1 bits (74), Expect = 0.85 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 21/68 (30%) Frame = +2 Query: 392 IKRLIGLPGDWISVRDKEEIRK---------------------IPEGHCWVEGDNGSASW 508 IKR++ GD + VRD + + +P+G+ +V GDN + S+ Sbjct: 380 IKRIVAKGGDTVEVRDGKLLVNGVVQDEEFVLEPLNYEMDQVTVPQGYVFVLGDNRNNSF 439 Query: 509 DSRSYGPV 532 DS ++GP+ Sbjct: 440 DSHNWGPL 447
>AK067325:Os02g0267000 | Length = 298 Score = 33.1 bits (74), Expect = 0.85 Identities = 38/151 (25%), Positives = 60/151 (39%), Gaps = 35/151 (23%) Frame = +2 Query: 203 LIGITISDRYFSFAT----VHGGSMRPTFEGSTDGREYALVKRSPLYDY---CRGEVVVF 361 L I IS + SF + SM PTF+ +V Y + C ++V+F Sbjct: 116 LAAIAISLAFRSFVAEPRFIPSLSMFPTFDVGD-----RIVAEKVTYYFRKPCINDIVIF 170 Query: 362 VSP-------VDHRSPAIKRLIGLPGDWISVRDKE-----EIR----------------K 457 SP IKR++ GD + V + E+R + Sbjct: 171 KSPPVLQEVGYTDNDVFIKRIVAREGDVVEVHKGKLVVNGEVRNEEFILEPPSYDMNPVQ 230 Query: 458 IPEGHCWVEGDNGSASWDSRSYGPVSNTFLL 550 +PE +V GDN + S+DS +GP+ + +L Sbjct: 231 VPENSVFVMGDNRNNSYDSHVWGPLPSKNIL 261
>AK073880:Os09g0456100 | Length = 514 Score = 29.6 bits (65), Expect = 9.4 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = -2 Query: 1542 KRTSNLTVHGQIASVQETGVAGCFLCYKF 1456 KRTS+L +GQI+S ++GCF C+ F Sbjct: 491 KRTSHLNKNGQISS-----LSGCFTCHAF 514
>AK072474:Os09g0456100 | Length = 620 Score = 29.6 bits (65), Expect = 9.4 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = -2 Query: 1542 KRTSNLTVHGQIASVQETGVAGCFLCYKF 1456 KRTS+L +GQI+S ++GCF C+ F Sbjct: 597 KRTSHLNKNGQISS-----LSGCFTCHAF 620 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 56,754,133 Number of extensions: 1261384 Number of successful extensions: 3377 Number of sequences better than 10.0: 10 Number of HSP's gapped: 3370 Number of HSP's successfully gapped: 12 Length of query: 747 Length of database: 15,399,855 Length adjustment: 108 Effective length of query: 639 Effective length of database: 11,075,427 Effective search space: 7077197853 Effective search space used: 7077197853 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)