ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf58i15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q58933:PSTK_METJA L-seryl-tRNA(Sec) kinase - Methanococcus janna... 54 6e-06
2Q6LX62:PSTK_METMP L-seryl-tRNA(Sec) kinase - Methanococcus marip... 46 1e-05
3Q8TUS5:PSTK_METKA L-seryl-tRNA(Sec) kinase - Methanopyrus kandleri 53 1e-05
4Q8BP74:PSTK_MOUSE L-seryl-tRNA(Sec) kinase - Mus musculus (Mouse) 52 2e-05
5Q8IV42:PSTK_HUMAN L-seryl-tRNA(Sec) kinase - Homo sapiens (Human) 50 9e-05
6Q9UQ88:CD2L2_HUMAN PITSLRE serine/threonine-protein kinase CDC2L... 39 0.16
7Q05319:STUB_DROME Serine proteinase stubble - Drosophila melanog... 39 0.27
8Q9HCE9:TM16H_HUMAN Transmembrane protein 16H - Homo sapiens (Human) 38 0.35
9Q9UVF5:PALF_YARLI pH-response regulator protein palF/RIM8 - Yarr... 37 0.61
10Q9FKZ0:DRL43_ARATH Probable disease resistance protein At5g66910... 37 0.79
11P21127:CD2L1_HUMAN PITSLRE serine/threonine-protein kinase CDC2L... 37 1.0
12Q8QG78:NCOR1_XENLA Nuclear receptor corepressor 1 - Xenopus laev... 36 1.3
13Q5LWL4:IF2_SILPO Translation initiation factor IF-2 - Silicibact... 36 1.3
14Q8TGE1:AWA1_YEAST Cell wall protein AWA1 precursor - Saccharomyc... 35 3.0
15Q64331:MYO6_MOUSE Myosin-VI - Mus musculus (Mouse) 35 3.9
16Q13875:MOBP_HUMAN Myelin-associated oligodendrocyte basic protei... 35 3.9
17P04196:HRG_HUMAN Histidine-rich glycoprotein precursor - Homo sa... 34 5.1
18Q62418:DBNL_MOUSE Drebrin-like protein - Mus musculus (Mouse) 34 5.1
19Q5SP85:CC85A_MOUSE Coiled-coil domain-containing protein 85A - M... 34 5.1
20Q9C0Q7:TIM54_NEUCR Mitochondrial import inner membrane transloca... 34 6.7
21Q6F9W4:OSTA_ACIAD LPS-assembly protein precursor - Acinetobacter... 34 6.7
22Q6DRP2:GNL3_DANRE Guanine nucleotide-binding protein-like 3 - Da... 33 8.7
23P24788:CD2L1_MOUSE PITSLRE serine/threonine-protein kinase CDC2L... 33 8.7
24P22856:VL96_IRV1 L96 protein - Tipula iridescent virus (TIV) (In... 33 8.7
25Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 -... 33 8.7

>Q58933:PSTK_METJA L-seryl-tRNA(Sec) kinase - Methanococcus jannaschii|
          Length = 248
 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 28/95 (29%), Positives = 53/95 (55%)
 Frame = +2

Query: 1127 LLVDDNFYYRSMRKRFYHIAQDDGHGFGIIHVATPEDICRKRNIARKGASRVPDEQFERM 1306
            ++VDD  YY SMR+   +IA+     + II++    D+  +RNI R    ++P+E  ++M
Sbjct: 71   VIVDDTNYYNSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIER--GEKIPNEVIKKM 128

Query: 1307 VRAFEPPNGSFGFESNFVVIDDAGELCDHPAIARE 1411
               F+ P   + ++  F++ID   ++ D   IA++
Sbjct: 129  YEKFDEPGKKYKWDEPFLIIDTTKDI-DFNEIAKK 162



to top

>Q6LX62:PSTK_METMP L-seryl-tRNA(Sec) kinase - Methanococcus maripaludis|
          Length = 255

 Score = 46.2 bits (108), Expect(2) = 1e-05
 Identities = 26/95 (27%), Positives = 48/95 (50%)
 Frame = +2

Query: 1127 LLVDDNFYYRSMRKRFYHIAQDDGHGFGIIHVATPEDICRKRNIARKGASRVPDEQFERM 1306
            ++VDD  YY S R+   +IA++    +  I++  P ++  KRNI R    ++P+E  + M
Sbjct: 72   VIVDDTNYYNSKRRDLMNIAKECDTNYVTIYLKAPLNLLLKRNIER--GQKIPNEVIKNM 129

Query: 1307 VRAFEPPNGSFGFESNFVVIDDAGELCDHPAIARE 1411
               F+ P   + ++   + +D   E  D+  I  E
Sbjct: 130  YEKFDTPGTKYAWDLPDITVDTT-EKIDYNEILNE 163



 Score = 26.2 bits (56), Expect(2) = 1e-05
 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
 Frame = +3

Query: 846  IILLCGIPGAGKTTLARQLCDVPYAETKSEALWGFAERVVVERIIFDELYEGTTALTATF 1025
            +I+L G+P  GK+T ++                 F++++  + I  D +  GT  +  +F
Sbjct: 2    LIILTGLPSVGKSTFSK----------------AFSKKMAEKNI--DNIILGTDLIRESF 43

Query: 1026 DPALWKHTQDEMAR-----IVKERL 1085
               +WK + +E  R     ++KE L
Sbjct: 44   --PVWKESYEEFIRDSNNYLIKEAL 66



to top

>Q8TUS5:PSTK_METKA L-seryl-tRNA(Sec) kinase - Methanopyrus kandleri|
          Length = 255

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
 Frame = +2

Query: 1124 VLLVDDNFYYRSMRKRFYHIAQDDGHGFGIIHVATPEDICRKRNIARKGASRVPDEQFER 1303
            +++ DD  YY SMR+    +A +    +GI+++ T  D C +RN  R+    +P+E   R
Sbjct: 74   LVIADDTNYYSSMRRELALLALERKVPWGIVYLRTGLDTCLRRN--RERGEPIPEEVVRR 131

Query: 1304 MVRAFEPPNGSFGFESNFVVIDD------------AGELCDHPAIAREKAHAPTLTE--- 1438
            +   FEPP     +E   +V+DD            +G   + P   R +    ++ E   
Sbjct: 132  IYDRFEPPEPDRWWERATLVLDDSRVSEEVLEFVESGLRVEKPKKRRRRTDPSSVNEVDV 191

Query: 1439 SLQRLLHQAAKHLDAAQLARQ---AENAQLCQQIEDQERTAENAVHNFDLVSRKWISSVL 1609
              ++++ +  + L     A Q    + ++L ++I       E AV  F   + + I   L
Sbjct: 192  RTRQVMGELMRRLSETGAATQELGRKLSELRREIVSSVEDPEKAVREFRRRAEEVIRECL 251

Query: 1610 NGD 1618
            +GD
Sbjct: 252  HGD 254



to top

>Q8BP74:PSTK_MOUSE L-seryl-tRNA(Sec) kinase - Mus musculus (Mouse)|
          Length = 359

 Score = 52.4 bits (124), Expect = 2e-05
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = +2

Query: 1127 LLVDDNFYYRSMRKRFYHIAQDDGHGFGIIHVATPEDICRKRNIARKGASRVPDEQFERM 1306
            L++DDNFYY+SMR   Y +A+    GF  + +  P + C KRN  R  +  +PDE  + M
Sbjct: 149  LVLDDNFYYQSMRYEVYQLARKYSLGFCQLFLDCPLETCLKRNGER--SQPLPDETIQLM 206

Query: 1307 VRAFEPPN-GSFGFESNFVVIDDA 1375
             R  E PN     +E N ++I  +
Sbjct: 207  GRKIEKPNPEKNAWEHNSLIIQSS 230



to top

>Q8IV42:PSTK_HUMAN L-seryl-tRNA(Sec) kinase - Homo sapiens (Human)|
          Length = 348

 Score = 50.1 bits (118), Expect = 9e-05
 Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 4/179 (2%)
 Frame = +2

Query: 1127 LLVDDNFYYRSMRKRFYHIAQDDGHGFGIIHVATPEDICRKRNIARKGASRVPDEQFERM 1306
            L++DDNFYY+SMR   Y +A+    GF  + +  P + C +RN  R  A  +P E    M
Sbjct: 148  LVLDDNFYYQSMRYEVYQLARKYSLGFCQLFLDCPLETCLQRNGQRPQA--LPPETIHLM 205

Query: 1307 VRAFEPPN-GSFGFESNFVVIDDAGELCDHPAIAREKAHAPTLTESLQRLLHQAAKHLDA 1483
             R  E PN     +E N + I         PA A E   +  +T+ L   L    K+ + 
Sbjct: 206  GRKLEKPNPEKNAWEHNSLTIPS-------PACASEA--SLEVTDLLLTALENPVKYAE- 255

Query: 1484 AQLARQAENAQLCQQIEDQERTAENAVHNFDLVSRKWISSVL---NGDDAAFEITSSKE 1651
                   +N +  Q+  D+   + N +H  D   R+ +S  +    G+  AF   + K+
Sbjct: 256  -------DNME--QKDTDRIICSTNILHKTDQTLRRIVSQTMKEAKGNQEAFSEMTFKQ 305



 Score = 34.7 bits (78), Expect = 3.9
 Identities = 25/86 (29%), Positives = 39/86 (45%)
 Frame = +3

Query: 846  IILLCGIPGAGKTTLARQLCDVPYAETKSEALWGFAERVVVERIIFDELYEGTTALTATF 1025
            + +LCG+P AGK+T AR L        + E  W     V  + ++ D    G  A  A  
Sbjct: 20   LCVLCGLPAAGKSTFARALAH----RLQQEQGWAIGV-VAYDDVMPDAFLAGARARPA-- 72

Query: 1026 DPALWKHTQDEMARIVKERLTQSRNG 1103
             P+ WK  + E+ + ++  L    NG
Sbjct: 73   -PSQWKLLRQELLKYLEYFLMAVING 97



to top

>Q9UQ88:CD2L2_HUMAN PITSLRE serine/threonine-protein kinase CDC2L2 - Homo sapiens|
           (Human)
          Length = 780

 Score = 39.3 bits (90), Expect = 0.16
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
 Frame = +2

Query: 263 KKRRAREKRHDAQRAHEEYQMQANRRHEAQKRKQAA----TTQRVSVDAEEHVQSRVSRL 430
           K  R +E+ H+ ++ H E Q +A R  E QKR++ A      +R  ++  E  + R  ++
Sbjct: 110 KHARVKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKM 169

Query: 431 RQPTVRAPIRPEAEKTSLPTRRPSRPLQLLSPNVPVDRRPVSAYVKAS 574
           R+       + E E+ +   R+     + +S +    R   S  VKAS
Sbjct: 170 REQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDKVKAS 217



to top

>Q05319:STUB_DROME Serine proteinase stubble - Drosophila melanogaster (Fruit fly)|
          Length = 787

 Score = 38.5 bits (88), Expect = 0.27
 Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
 Frame = +1

Query: 2434 TRPRRMPGWNAAV*C---WRRTITCSTLKSRSTTGFCCSCARTTSPVWAAKPTSSSKRLT 2604
            TRP+  PG + A      W  + T +T  + STT    +  RTT+P    + T+++K   
Sbjct: 384  TRPQLSPGTSLAASSSSHWPSSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRRTTTNKPTR 443

Query: 2605 TANGP--GTLRASRSIQRPKTPSTFPRTPSSRMVSSCPPRSCLRTTR 2739
                P   T  +S S    KTP+T     SS   SS    S  R T+
Sbjct: 444  PYQRPTTATSSSSTSTTSSKTPTTTRPISSSSSSSSGIVTSSQRPTQ 490



to top

>Q9HCE9:TM16H_HUMAN Transmembrane protein 16H - Homo sapiens (Human)|
          Length = 1232

 Score = 38.1 bits (87), Expect = 0.35
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
 Frame = +2

Query: 266  KRRAREKRHDAQRAHEEYQMQANRRHEAQKRKQAATTQRVSVDA--EEHVQSRVSRLRQP 439
            +RR   KRH+ Q  H   Q Q  RR E ++++ A    R   D+   E  ++  S L   
Sbjct: 881  QRREAFKRHERQAQHRYQQQQRRRREEEERQRHAEHHARREHDSGGREEARAEGSGLDPA 940

Query: 440  TVRAPIRPEAEKTSLP---TRRPSRPLQLLSPN 529
            T       +A+ ++       RP RP  LL+PN
Sbjct: 941  TSSEKASAKAKGSTAGGHGPERPKRPGSLLAPN 973



to top

>Q9UVF5:PALF_YARLI pH-response regulator protein palF/RIM8 - Yarrowia lipolytica|
            (Candida lipolytica)
          Length = 881

 Score = 37.4 bits (85), Expect = 0.61
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
 Frame = -3

Query: 3205 SPRR*STGQSASPGTTALIASLKPMASNAGAQALTPSANARRHRGGT----DGSMWNTIG 3038
            SP   S+G +A+  TT  + +    AS+     L PS++    R  T    DGS+W ++G
Sbjct: 151  SPTSTSSGVAATADTTTTMDTNTSQASSTAPDTLNPSSSTELSRTATRQSSDGSIWRSVG 210

Query: 3037 CSVLPVVASRSSRRRLITVMGEPMYCAPSAVAFLGSLLSTPKR 2909
             S     +   +   + +V  EP+  +  ++    S LS   R
Sbjct: 211  SSTPGAASGGVADMMMNSVTTEPVLSSRMSMHTTNSHLSQMSR 253



to top

>Q9FKZ0:DRL43_ARATH Probable disease resistance protein At5g66910 - Arabidopsis thaliana|
            (Mouse-ear cress)
          Length = 815

 Score = 37.0 bits (84), Expect = 0.79
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +3

Query: 834  MDSAIILLCGIPGAGKTTLARQLCDVPYAETK-SEALWGFAERVVVERIIFDELYEGTTA 1010
            +D++++++ G PG GKTTL  +LCD P  E +  +  +         R I   L +    
Sbjct: 187  LDNSVVVVSGPPGCGKTTLVTKLCDDPEIEGEFKKIFYSVVSNTPNFRAIVQNLLQDNGC 246

Query: 1011 LTATFD 1028
               TFD
Sbjct: 247  GAITFD 252



to top

>P21127:CD2L1_HUMAN PITSLRE serine/threonine-protein kinase CDC2L1 - Homo sapiens|
           (Human)
          Length = 795

 Score = 36.6 bits (83), Expect = 1.0
 Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
 Frame = +2

Query: 272 RAREKRHDAQRAHEEYQMQANRRHEAQKRKQAA----TTQRVSVDAEEHVQSRVSRLRQP 439
           + +E+ H+ ++ H E Q +A R  E QKR++ A      +R  ++  E  + R  ++R+ 
Sbjct: 125 KEKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKMREQ 184

Query: 440 TVRAPIRPEAEKTSLPTRRPSRPLQLLSPNVPVDRRPVSAYVKAS 574
                 + E E+ +   R+     + +S +    R   S  VKAS
Sbjct: 185 QKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDKVKAS 229



to top

>Q8QG78:NCOR1_XENLA Nuclear receptor corepressor 1 - Xenopus laevis (African clawed frog)|
          Length = 2498

 Score = 36.2 bits (82), Expect = 1.3
 Identities = 23/92 (25%), Positives = 40/92 (43%)
 Frame = +2

Query: 263  KKRRAREKRHDAQRAHEEYQMQANRRHEAQKRKQAATTQRVSVDAEEHVQSRVSRLRQPT 442
            ++ R RE+  D +R  E+ + +++R  E  +   AA     +    EH            
Sbjct: 1770 ERERERERERDREREKEQRERESDRERERDRLAHAAAAAAAASAPSEHY----------- 1818

Query: 443  VRAPIRPEAEKTSLPTRRPSRPLQLLSPNVPV 538
                +RP +E+ S P+ RPS    + SP+  V
Sbjct: 1819 ----LRPVSEQPSRPSSRPSSHGYVRSPSPSV 1846



to top

>Q5LWL4:IF2_SILPO Translation initiation factor IF-2 - Silicibacter pomeroyi|
          Length = 835

 Score = 36.2 bits (82), Expect = 1.3
 Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 5/87 (5%)
 Frame = +2

Query: 251 LTVLKKRRAREKRHDAQRAHEEYQMQANR-----RHEAQKRKQAATTQRVSVDAEEHVQS 415
           L  LK  +ARE    AQR  EE      R       EA++R+Q    QR    AEE  + 
Sbjct: 78  LNALKAAKARESEEAAQREAEEKARAEERERRRAEQEAKEREQREAEQRAREKAEEEERQ 137

Query: 416 RVSRLRQPTVRAPIRPEAEKTSLPTRR 496
           R     +   RA +R  AE+ +    R
Sbjct: 138 R-REAEEEAKRAAVRAAAEQEAPKAER 163



to top

>Q8TGE1:AWA1_YEAST Cell wall protein AWA1 precursor - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 1713

 Score = 35.0 bits (79), Expect = 3.0
 Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 9/106 (8%)
 Frame = +1

Query: 2488 TITCSTLKSRSTTGFCCSCARTTSPVWAAKPTSSSKRLTTA-------NGPGTLRASRSI 2646
            T+ CS+  +  T+     C  TTS    A  T SSK  TT        NG  T   +   
Sbjct: 1352 TVPCSSTTATITSCDETGCHVTTSTGTVATETVSSKSYTTVTVTHCDNNGCNTKTVTSEA 1411

Query: 2647 QRPKTPSTFPRTPSSRMVSSCPPRSC--LRTTRRCPPVPRSSRAIP 2778
                T +  P+T ++  V+ C    C     T  CP    ++   P
Sbjct: 1412 PEATTTTVSPKTYTTATVTQCDDNGCSTKTVTSECPEETSATTTSP 1457



to top

>Q64331:MYO6_MOUSE Myosin-VI - Mus musculus (Mouse)|
          Length = 1265

 Score = 34.7 bits (78), Expect = 3.9
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 15/125 (12%)
 Frame = +2

Query: 263  KKRRAREKRHDAQRAHEE-----YQMQANRRHEAQKRKQAATTQRVSVDAEEHVQSRV-- 421
            K+R+ RE+  + +R  EE      +M+  R+ E ++RK+         D E+ +QS V  
Sbjct: 938  KERKRREEDEERRRKEEEERRMKLEMEPKRKQEEEERKKRE-------DDEKRIQSEVEA 990

Query: 422  ----SRLRQPTVRAPIRPEAEKTSLPTRRPSRPLQLLSPNVPVD----RRPVSAYVKASA 577
                 R  +   +A +  E     L  R      +L+S     D    R P     KA++
Sbjct: 991  QLARQREEESQQQAVLAQECRDRELALRIAQNESELISDEAQGDMALRRGPAVQATKAAS 1050

Query: 578  GVIKH 592
            G  KH
Sbjct: 1051 GTKKH 1055



to top

>Q13875:MOBP_HUMAN Myelin-associated oligodendrocyte basic protein - Homo sapiens|
            (Human)
          Length = 183

 Score = 34.7 bits (78), Expect = 3.9
 Identities = 25/79 (31%), Positives = 36/79 (45%)
 Frame = +1

Query: 2533 CCSCARTTSPVWAAKPTSSSKRLTTANGPGTLRASRSIQRPKTPSTFPRTPSSRMVSSCP 2712
            CC+C +T +   A  P    ++   A  P  +RA     +P++P    R P S   S   
Sbjct: 62   CCACQKTRTSRRAKSPQRPKQQ--PAAPPAVVRAPA---KPRSPPRSERQPRSPPRSERQ 116

Query: 2713 PRSCLRTTRRCPPVPRSSR 2769
            PRS  R+ R+    PRS R
Sbjct: 117  PRSPPRSERQPRSPPRSER 135



to top

>P04196:HRG_HUMAN Histidine-rich glycoprotein precursor - Homo sapiens (Human)|
          Length = 525

 Score = 34.3 bits (77), Expect = 5.1
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +2

Query: 3446 WNGSKSSSPTRPHGRWHAARHQHGGHSGRDHWSPLYRHCDARSRSHARTAPQ 3601
            W G + SS T+P  + H +R  H  H   +H  P     D R  SH    PQ
Sbjct: 265  WGGHERSSTTKPPFKPHGSRDHHHPHKPHEHGPP--PPPDERDHSHGPPLPQ 314



to top

>Q62418:DBNL_MOUSE Drebrin-like protein - Mus musculus (Mouse)|
          Length = 436

 Score = 34.3 bits (77), Expect = 5.1
 Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 20/127 (15%)
 Frame = +2

Query: 263 KKRRAREKRH--DAQRAHEEYQMQANRRHEAQKRKQAATTQRVSVDAEEHVQSRVSRLRQ 436
           +KRRA E+R   + +R   E Q  A R    Q++ ++A     S    E  Q  VSR RQ
Sbjct: 194 EKRRAEEERQRLEEERRERELQEAARREQRYQEQHRSAGAPSPSSRTGEPEQEAVSRTRQ 253

Query: 437 PTV----RAPIRPEAEK--------TSLPTRRPSR------PLQLLSPNVPVDRRPVSAY 562
                  +AP   E  K        TS+ + +P +        QL  P     R P +  
Sbjct: 254 EWESAGQQAPHPREIFKQKERAMSTTSVTSSQPGKLRSPFLQKQLTQPETSYGREPTAPV 313

Query: 563 VKASAGV 583
            + +AGV
Sbjct: 314 SRPAAGV 320



to top

>Q5SP85:CC85A_MOUSE Coiled-coil domain-containing protein 85A - Mus musculus (Mouse)|
          Length = 500

 Score = 34.3 bits (77), Expect = 5.1
 Identities = 32/116 (27%), Positives = 40/116 (34%), Gaps = 5/116 (4%)
 Frame = +2

Query: 3422 AAPQSAPVWNGSKSSSPTRPHGRWHAARHQHGGHSGRDHWSPLYRHCDARSRSHARTAPQ 3601
            A P    V +GS +SS        H   H  GG    +H              H  T+P+
Sbjct: 195  ATPYVRDVGDGSSTSSTGSTDSPDHHKHHASGGSP--EHLQKPRSEGSPEHTKHRSTSPE 252

Query: 3602 LCRLRAGHTRKPRRQGLHIH----QGRVGIHHG-LCAGQHFFRSQPDGGQEPRLLP 3754
                   H  KPR  G   H    +G    HH  LC G    +  P  G  P +LP
Sbjct: 253  -------HLHKPRASGTPDHSKALKGPSPEHHKPLCKGSPEQQRHPHPGSSPEVLP 301



to top

>Q9C0Q7:TIM54_NEUCR Mitochondrial import inner membrane translocase subunit tim-54 -|
            Neurospora crassa
          Length = 425

 Score = 33.9 bits (76), Expect = 6.7
 Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 6/146 (4%)
 Frame = -2

Query: 3257 DCVRLVRDHDREAIVPQVTKTIVDWPVGIPRHDGLDRILEANGLKRGRPGIDAVRERSAP 3078
            D +R+ +DH  E + P +  + +DW     R +G  R + A  L++ R G +   E+   
Sbjct: 78   DGLRVAQDHYTEYVKPVLAASGLDWEFVQGRREGDVRAVVAERLRKVRRGWENKEEQDPN 137

Query: 3077 SWWDRRVNVEHNRVQRLASRRVALEPAPIDHRHGRAHVLRTVGRGILGVLVVDTK-AKVP 2901
                +   +E  R QR       +    +  RH     LR +  G LG LV   + A +P
Sbjct: 138  REPTKDELIEIYRQQRGIKDYEGVRGDVVIGRHTWKEYLRGLHEGWLGPLVAPAEPAPLP 197

Query: 2900 LHKVPDAI-----ICDSLAHERRREQ 2838
                P A        D  A E++ E+
Sbjct: 198  PTPAPAAAEGSTSTEDKPAEEKKEEE 223



to top

>Q6F9W4:OSTA_ACIAD LPS-assembly protein precursor - Acinetobacter sp. (strain ADP1)|
          Length = 819

 Score = 33.9 bits (76), Expect = 6.7
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = -2

Query: 3602 VVAQSERVTYFVHHNVGKVATNDRVRNDPHVGAEQHASDHAVELVMRTSTHSTLVRTAAQ 3423
            ++AQS+++ Y +    G +      +N  ++  +QHA  HA E + RTS    ++R A  
Sbjct: 163  LLAQSDQINYNLKTQQGDL------KNSFYISEQQHAHGHA-EQIQRTSPTEIILRNATY 215

Query: 3422 RPCCVEQR 3399
              C  EQ+
Sbjct: 216  TTCPPEQK 223



to top

>Q6DRP2:GNL3_DANRE Guanine nucleotide-binding protein-like 3 - Danio rerio (Zebrafish)|
           (Brachydanio rerio)
          Length = 561

 Score = 33.5 bits (75), Expect = 8.7
 Identities = 18/74 (24%), Positives = 32/74 (43%)
 Frame = +2

Query: 293 DAQRAHEEYQMQANRRHEAQKRKQAATTQRVSVDAEEHVQSRVSRLRQPTVRAPIRPEAE 472
           D     +E   +A    +A++ K   TT     +AE H+ S V  +++PT +   +P  E
Sbjct: 473 DVSELPKEILTKAATTTDAEEEKMDTTTNTDEPEAESHISSTVEPIQEPTEKRKDKPAKE 532

Query: 473 KTSLPTRRPSRPLQ 514
              +P       +Q
Sbjct: 533 VKFVPVNTDLTSMQ 546



to top

>P24788:CD2L1_MOUSE PITSLRE serine/threonine-protein kinase CDC2L1 - Mus musculus|
           (Mouse)
          Length = 784

 Score = 33.5 bits (75), Expect = 8.7
 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
 Frame = +2

Query: 272 RAREKRHDAQRAHEEYQMQANRRHEAQKRKQAA----TTQRVSVDAEEHVQSRVSRLRQP 439
           + +E+ H+ ++ H E Q +A R  E QKR++ A      +R  ++  E  + R  +LR+ 
Sbjct: 125 KEKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKLREQ 184

Query: 440 TVRAPIRPEAEKTSLPTRR 496
                 + E E+ +   R+
Sbjct: 185 QKEQREQKERERRAEERRK 203



to top

>P22856:VL96_IRV1 L96 protein - Tipula iridescent virus (TIV) (Insect iridescent virus|
            type 1)
          Length = 867

 Score = 33.5 bits (75), Expect = 8.7
 Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = +1

Query: 2548 RTTSPVWAAKPTSSSKRLTTANGPGTLRASRSIQRPKTPSTFPRTPSSRMVSSCPP-RSC 2724
            R+ SP  + +P S S R   +  P     S S+ RPK+PS  P++PS R  S  P  R  
Sbjct: 493  RSKSP--SVRPKSPSAR-PRSKSPSVRSKSPSV-RPKSPSVRPKSPSVRPRSKSPSVRPK 548

Query: 2725 LRTTRRCPPVPRSSRAI 2775
              + R  PP P +S +I
Sbjct: 549  SPSVRPPPPDPSNSPSI 565



to top

>Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 - Homo sapiens (Human)|
          Length = 2752

 Score = 33.5 bits (75), Expect = 8.7
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +1

Query: 3784 RSRTDTRRSQASDQGISTTRCRGSRAPHHSFSRTKTPTQRRIRTHS 3921
            RSRT TRR   S       R R SR P    SRT++P +RR R+ S
Sbjct: 595  RSRTPTRRRSRSRTPARRGRSR-SRTPARRRSRTRSPVRRRSRSRS 639


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 836,198,516
Number of extensions: 19040905
Number of successful extensions: 71645
Number of sequences better than 10.0: 25
Number of HSP's gapped: 71435
Number of HSP's successfully gapped: 27
Length of query: 1577
Length of database: 100,686,439
Length adjustment: 127
Effective length of query: 1450
Effective length of database: 65,850,974
Effective search space: 95483912300
Effective search space used: 95483912300
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top