| Clone Name | FLbaf58i15 |
|---|---|
| Clone Library Name | barley_pub |
>Q58933:PSTK_METJA L-seryl-tRNA(Sec) kinase - Methanococcus jannaschii| Length = 248 Score = 53.9 bits (128), Expect = 6e-06 Identities = 28/95 (29%), Positives = 53/95 (55%) Frame = +2 Query: 1127 LLVDDNFYYRSMRKRFYHIAQDDGHGFGIIHVATPEDICRKRNIARKGASRVPDEQFERM 1306 ++VDD YY SMR+ +IA+ + II++ D+ +RNI R ++P+E ++M Sbjct: 71 VIVDDTNYYNSMRRDLINIAKKYNKNYAIIYLKASLDVLIRRNIER--GEKIPNEVIKKM 128 Query: 1307 VRAFEPPNGSFGFESNFVVIDDAGELCDHPAIARE 1411 F+ P + ++ F++ID ++ D IA++ Sbjct: 129 YEKFDEPGKKYKWDEPFLIIDTTKDI-DFNEIAKK 162
>Q6LX62:PSTK_METMP L-seryl-tRNA(Sec) kinase - Methanococcus maripaludis| Length = 255 Score = 46.2 bits (108), Expect(2) = 1e-05 Identities = 26/95 (27%), Positives = 48/95 (50%) Frame = +2 Query: 1127 LLVDDNFYYRSMRKRFYHIAQDDGHGFGIIHVATPEDICRKRNIARKGASRVPDEQFERM 1306 ++VDD YY S R+ +IA++ + I++ P ++ KRNI R ++P+E + M Sbjct: 72 VIVDDTNYYNSKRRDLMNIAKECDTNYVTIYLKAPLNLLLKRNIER--GQKIPNEVIKNM 129 Query: 1307 VRAFEPPNGSFGFESNFVVIDDAGELCDHPAIARE 1411 F+ P + ++ + +D E D+ I E Sbjct: 130 YEKFDTPGTKYAWDLPDITVDTT-EKIDYNEILNE 163 Score = 26.2 bits (56), Expect(2) = 1e-05 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 5/85 (5%) Frame = +3 Query: 846 IILLCGIPGAGKTTLARQLCDVPYAETKSEALWGFAERVVVERIIFDELYEGTTALTATF 1025 +I+L G+P GK+T ++ F++++ + I D + GT + +F Sbjct: 2 LIILTGLPSVGKSTFSK----------------AFSKKMAEKNI--DNIILGTDLIRESF 43 Query: 1026 DPALWKHTQDEMAR-----IVKERL 1085 +WK + +E R ++KE L Sbjct: 44 --PVWKESYEEFIRDSNNYLIKEAL 66
>Q8TUS5:PSTK_METKA L-seryl-tRNA(Sec) kinase - Methanopyrus kandleri| Length = 255 Score = 52.8 bits (125), Expect = 1e-05 Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 18/183 (9%) Frame = +2 Query: 1124 VLLVDDNFYYRSMRKRFYHIAQDDGHGFGIIHVATPEDICRKRNIARKGASRVPDEQFER 1303 +++ DD YY SMR+ +A + +GI+++ T D C +RN R+ +P+E R Sbjct: 74 LVIADDTNYYSSMRRELALLALERKVPWGIVYLRTGLDTCLRRN--RERGEPIPEEVVRR 131 Query: 1304 MVRAFEPPNGSFGFESNFVVIDD------------AGELCDHPAIAREKAHAPTLTE--- 1438 + FEPP +E +V+DD +G + P R + ++ E Sbjct: 132 IYDRFEPPEPDRWWERATLVLDDSRVSEEVLEFVESGLRVEKPKKRRRRTDPSSVNEVDV 191 Query: 1439 SLQRLLHQAAKHLDAAQLARQ---AENAQLCQQIEDQERTAENAVHNFDLVSRKWISSVL 1609 ++++ + + L A Q + ++L ++I E AV F + + I L Sbjct: 192 RTRQVMGELMRRLSETGAATQELGRKLSELRREIVSSVEDPEKAVREFRRRAEEVIRECL 251 Query: 1610 NGD 1618 +GD Sbjct: 252 HGD 254
>Q8BP74:PSTK_MOUSE L-seryl-tRNA(Sec) kinase - Mus musculus (Mouse)| Length = 359 Score = 52.4 bits (124), Expect = 2e-05 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Frame = +2 Query: 1127 LLVDDNFYYRSMRKRFYHIAQDDGHGFGIIHVATPEDICRKRNIARKGASRVPDEQFERM 1306 L++DDNFYY+SMR Y +A+ GF + + P + C KRN R + +PDE + M Sbjct: 149 LVLDDNFYYQSMRYEVYQLARKYSLGFCQLFLDCPLETCLKRNGER--SQPLPDETIQLM 206 Query: 1307 VRAFEPPN-GSFGFESNFVVIDDA 1375 R E PN +E N ++I + Sbjct: 207 GRKIEKPNPEKNAWEHNSLIIQSS 230
>Q8IV42:PSTK_HUMAN L-seryl-tRNA(Sec) kinase - Homo sapiens (Human)| Length = 348 Score = 50.1 bits (118), Expect = 9e-05 Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 4/179 (2%) Frame = +2 Query: 1127 LLVDDNFYYRSMRKRFYHIAQDDGHGFGIIHVATPEDICRKRNIARKGASRVPDEQFERM 1306 L++DDNFYY+SMR Y +A+ GF + + P + C +RN R A +P E M Sbjct: 148 LVLDDNFYYQSMRYEVYQLARKYSLGFCQLFLDCPLETCLQRNGQRPQA--LPPETIHLM 205 Query: 1307 VRAFEPPN-GSFGFESNFVVIDDAGELCDHPAIAREKAHAPTLTESLQRLLHQAAKHLDA 1483 R E PN +E N + I PA A E + +T+ L L K+ + Sbjct: 206 GRKLEKPNPEKNAWEHNSLTIPS-------PACASEA--SLEVTDLLLTALENPVKYAE- 255 Query: 1484 AQLARQAENAQLCQQIEDQERTAENAVHNFDLVSRKWISSVL---NGDDAAFEITSSKE 1651 +N + Q+ D+ + N +H D R+ +S + G+ AF + K+ Sbjct: 256 -------DNME--QKDTDRIICSTNILHKTDQTLRRIVSQTMKEAKGNQEAFSEMTFKQ 305 Score = 34.7 bits (78), Expect = 3.9 Identities = 25/86 (29%), Positives = 39/86 (45%) Frame = +3 Query: 846 IILLCGIPGAGKTTLARQLCDVPYAETKSEALWGFAERVVVERIIFDELYEGTTALTATF 1025 + +LCG+P AGK+T AR L + E W V + ++ D G A A Sbjct: 20 LCVLCGLPAAGKSTFARALAH----RLQQEQGWAIGV-VAYDDVMPDAFLAGARARPA-- 72 Query: 1026 DPALWKHTQDEMARIVKERLTQSRNG 1103 P+ WK + E+ + ++ L NG Sbjct: 73 -PSQWKLLRQELLKYLEYFLMAVING 97
>Q9UQ88:CD2L2_HUMAN PITSLRE serine/threonine-protein kinase CDC2L2 - Homo sapiens| (Human) Length = 780 Score = 39.3 bits (90), Expect = 0.16 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 4/108 (3%) Frame = +2 Query: 263 KKRRAREKRHDAQRAHEEYQMQANRRHEAQKRKQAA----TTQRVSVDAEEHVQSRVSRL 430 K R +E+ H+ ++ H E Q +A R E QKR++ A +R ++ E + R ++ Sbjct: 110 KHARVKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKM 169 Query: 431 RQPTVRAPIRPEAEKTSLPTRRPSRPLQLLSPNVPVDRRPVSAYVKAS 574 R+ + E E+ + R+ + +S + R S VKAS Sbjct: 170 REQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDKVKAS 217
>Q05319:STUB_DROME Serine proteinase stubble - Drosophila melanogaster (Fruit fly)| Length = 787 Score = 38.5 bits (88), Expect = 0.27 Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 5/107 (4%) Frame = +1 Query: 2434 TRPRRMPGWNAAV*C---WRRTITCSTLKSRSTTGFCCSCARTTSPVWAAKPTSSSKRLT 2604 TRP+ PG + A W + T +T + STT + RTT+P + T+++K Sbjct: 384 TRPQLSPGTSLAASSSSHWPSSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRRTTTNKPTR 443 Query: 2605 TANGP--GTLRASRSIQRPKTPSTFPRTPSSRMVSSCPPRSCLRTTR 2739 P T +S S KTP+T SS SS S R T+ Sbjct: 444 PYQRPTTATSSSSTSTTSSKTPTTTRPISSSSSSSSGIVTSSQRPTQ 490
>Q9HCE9:TM16H_HUMAN Transmembrane protein 16H - Homo sapiens (Human)| Length = 1232 Score = 38.1 bits (87), Expect = 0.35 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 5/93 (5%) Frame = +2 Query: 266 KRRAREKRHDAQRAHEEYQMQANRRHEAQKRKQAATTQRVSVDA--EEHVQSRVSRLRQP 439 +RR KRH+ Q H Q Q RR E ++++ A R D+ E ++ S L Sbjct: 881 QRREAFKRHERQAQHRYQQQQRRRREEEERQRHAEHHARREHDSGGREEARAEGSGLDPA 940 Query: 440 TVRAPIRPEAEKTSLP---TRRPSRPLQLLSPN 529 T +A+ ++ RP RP LL+PN Sbjct: 941 TSSEKASAKAKGSTAGGHGPERPKRPGSLLAPN 973
>Q9UVF5:PALF_YARLI pH-response regulator protein palF/RIM8 - Yarrowia lipolytica| (Candida lipolytica) Length = 881 Score = 37.4 bits (85), Expect = 0.61 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 4/103 (3%) Frame = -3 Query: 3205 SPRR*STGQSASPGTTALIASLKPMASNAGAQALTPSANARRHRGGT----DGSMWNTIG 3038 SP S+G +A+ TT + + AS+ L PS++ R T DGS+W ++G Sbjct: 151 SPTSTSSGVAATADTTTTMDTNTSQASSTAPDTLNPSSSTELSRTATRQSSDGSIWRSVG 210 Query: 3037 CSVLPVVASRSSRRRLITVMGEPMYCAPSAVAFLGSLLSTPKR 2909 S + + + +V EP+ + ++ S LS R Sbjct: 211 SSTPGAASGGVADMMMNSVTTEPVLSSRMSMHTTNSHLSQMSR 253
>Q9FKZ0:DRL43_ARATH Probable disease resistance protein At5g66910 - Arabidopsis thaliana| (Mouse-ear cress) Length = 815 Score = 37.0 bits (84), Expect = 0.79 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +3 Query: 834 MDSAIILLCGIPGAGKTTLARQLCDVPYAETK-SEALWGFAERVVVERIIFDELYEGTTA 1010 +D++++++ G PG GKTTL +LCD P E + + + R I L + Sbjct: 187 LDNSVVVVSGPPGCGKTTLVTKLCDDPEIEGEFKKIFYSVVSNTPNFRAIVQNLLQDNGC 246 Query: 1011 LTATFD 1028 TFD Sbjct: 247 GAITFD 252
>P21127:CD2L1_HUMAN PITSLRE serine/threonine-protein kinase CDC2L1 - Homo sapiens| (Human) Length = 795 Score = 36.6 bits (83), Expect = 1.0 Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 4/105 (3%) Frame = +2 Query: 272 RAREKRHDAQRAHEEYQMQANRRHEAQKRKQAA----TTQRVSVDAEEHVQSRVSRLRQP 439 + +E+ H+ ++ H E Q +A R E QKR++ A +R ++ E + R ++R+ Sbjct: 125 KEKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKMREQ 184 Query: 440 TVRAPIRPEAEKTSLPTRRPSRPLQLLSPNVPVDRRPVSAYVKAS 574 + E E+ + R+ + +S + R S VKAS Sbjct: 185 QKEQREQKERERRAEERRKEREARREVSAHHRTMREDYSDKVKAS 229
>Q8QG78:NCOR1_XENLA Nuclear receptor corepressor 1 - Xenopus laevis (African clawed frog)| Length = 2498 Score = 36.2 bits (82), Expect = 1.3 Identities = 23/92 (25%), Positives = 40/92 (43%) Frame = +2 Query: 263 KKRRAREKRHDAQRAHEEYQMQANRRHEAQKRKQAATTQRVSVDAEEHVQSRVSRLRQPT 442 ++ R RE+ D +R E+ + +++R E + AA + EH Sbjct: 1770 ERERERERERDREREKEQRERESDRERERDRLAHAAAAAAAASAPSEHY----------- 1818 Query: 443 VRAPIRPEAEKTSLPTRRPSRPLQLLSPNVPV 538 +RP +E+ S P+ RPS + SP+ V Sbjct: 1819 ----LRPVSEQPSRPSSRPSSHGYVRSPSPSV 1846
>Q5LWL4:IF2_SILPO Translation initiation factor IF-2 - Silicibacter pomeroyi| Length = 835 Score = 36.2 bits (82), Expect = 1.3 Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 5/87 (5%) Frame = +2 Query: 251 LTVLKKRRAREKRHDAQRAHEEYQMQANR-----RHEAQKRKQAATTQRVSVDAEEHVQS 415 L LK +ARE AQR EE R EA++R+Q QR AEE + Sbjct: 78 LNALKAAKARESEEAAQREAEEKARAEERERRRAEQEAKEREQREAEQRAREKAEEEERQ 137 Query: 416 RVSRLRQPTVRAPIRPEAEKTSLPTRR 496 R + RA +R AE+ + R Sbjct: 138 R-REAEEEAKRAAVRAAAEQEAPKAER 163
>Q8TGE1:AWA1_YEAST Cell wall protein AWA1 precursor - Saccharomyces cerevisiae (Baker's| yeast) Length = 1713 Score = 35.0 bits (79), Expect = 3.0 Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 9/106 (8%) Frame = +1 Query: 2488 TITCSTLKSRSTTGFCCSCARTTSPVWAAKPTSSSKRLTTA-------NGPGTLRASRSI 2646 T+ CS+ + T+ C TTS A T SSK TT NG T + Sbjct: 1352 TVPCSSTTATITSCDETGCHVTTSTGTVATETVSSKSYTTVTVTHCDNNGCNTKTVTSEA 1411 Query: 2647 QRPKTPSTFPRTPSSRMVSSCPPRSC--LRTTRRCPPVPRSSRAIP 2778 T + P+T ++ V+ C C T CP ++ P Sbjct: 1412 PEATTTTVSPKTYTTATVTQCDDNGCSTKTVTSECPEETSATTTSP 1457
>Q64331:MYO6_MOUSE Myosin-VI - Mus musculus (Mouse)| Length = 1265 Score = 34.7 bits (78), Expect = 3.9 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 15/125 (12%) Frame = +2 Query: 263 KKRRAREKRHDAQRAHEE-----YQMQANRRHEAQKRKQAATTQRVSVDAEEHVQSRV-- 421 K+R+ RE+ + +R EE +M+ R+ E ++RK+ D E+ +QS V Sbjct: 938 KERKRREEDEERRRKEEEERRMKLEMEPKRKQEEEERKKRE-------DDEKRIQSEVEA 990 Query: 422 ----SRLRQPTVRAPIRPEAEKTSLPTRRPSRPLQLLSPNVPVD----RRPVSAYVKASA 577 R + +A + E L R +L+S D R P KA++ Sbjct: 991 QLARQREEESQQQAVLAQECRDRELALRIAQNESELISDEAQGDMALRRGPAVQATKAAS 1050 Query: 578 GVIKH 592 G KH Sbjct: 1051 GTKKH 1055
>Q13875:MOBP_HUMAN Myelin-associated oligodendrocyte basic protein - Homo sapiens| (Human) Length = 183 Score = 34.7 bits (78), Expect = 3.9 Identities = 25/79 (31%), Positives = 36/79 (45%) Frame = +1 Query: 2533 CCSCARTTSPVWAAKPTSSSKRLTTANGPGTLRASRSIQRPKTPSTFPRTPSSRMVSSCP 2712 CC+C +T + A P ++ A P +RA +P++P R P S S Sbjct: 62 CCACQKTRTSRRAKSPQRPKQQ--PAAPPAVVRAPA---KPRSPPRSERQPRSPPRSERQ 116 Query: 2713 PRSCLRTTRRCPPVPRSSR 2769 PRS R+ R+ PRS R Sbjct: 117 PRSPPRSERQPRSPPRSER 135
>P04196:HRG_HUMAN Histidine-rich glycoprotein precursor - Homo sapiens (Human)| Length = 525 Score = 34.3 bits (77), Expect = 5.1 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = +2 Query: 3446 WNGSKSSSPTRPHGRWHAARHQHGGHSGRDHWSPLYRHCDARSRSHARTAPQ 3601 W G + SS T+P + H +R H H +H P D R SH PQ Sbjct: 265 WGGHERSSTTKPPFKPHGSRDHHHPHKPHEHGPP--PPPDERDHSHGPPLPQ 314
>Q62418:DBNL_MOUSE Drebrin-like protein - Mus musculus (Mouse)| Length = 436 Score = 34.3 bits (77), Expect = 5.1 Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 20/127 (15%) Frame = +2 Query: 263 KKRRAREKRH--DAQRAHEEYQMQANRRHEAQKRKQAATTQRVSVDAEEHVQSRVSRLRQ 436 +KRRA E+R + +R E Q A R Q++ ++A S E Q VSR RQ Sbjct: 194 EKRRAEEERQRLEEERRERELQEAARREQRYQEQHRSAGAPSPSSRTGEPEQEAVSRTRQ 253 Query: 437 PTV----RAPIRPEAEK--------TSLPTRRPSR------PLQLLSPNVPVDRRPVSAY 562 +AP E K TS+ + +P + QL P R P + Sbjct: 254 EWESAGQQAPHPREIFKQKERAMSTTSVTSSQPGKLRSPFLQKQLTQPETSYGREPTAPV 313 Query: 563 VKASAGV 583 + +AGV Sbjct: 314 SRPAAGV 320
>Q5SP85:CC85A_MOUSE Coiled-coil domain-containing protein 85A - Mus musculus (Mouse)| Length = 500 Score = 34.3 bits (77), Expect = 5.1 Identities = 32/116 (27%), Positives = 40/116 (34%), Gaps = 5/116 (4%) Frame = +2 Query: 3422 AAPQSAPVWNGSKSSSPTRPHGRWHAARHQHGGHSGRDHWSPLYRHCDARSRSHARTAPQ 3601 A P V +GS +SS H H GG +H H T+P+ Sbjct: 195 ATPYVRDVGDGSSTSSTGSTDSPDHHKHHASGGSP--EHLQKPRSEGSPEHTKHRSTSPE 252 Query: 3602 LCRLRAGHTRKPRRQGLHIH----QGRVGIHHG-LCAGQHFFRSQPDGGQEPRLLP 3754 H KPR G H +G HH LC G + P G P +LP Sbjct: 253 -------HLHKPRASGTPDHSKALKGPSPEHHKPLCKGSPEQQRHPHPGSSPEVLP 301
>Q9C0Q7:TIM54_NEUCR Mitochondrial import inner membrane translocase subunit tim-54 -| Neurospora crassa Length = 425 Score = 33.9 bits (76), Expect = 6.7 Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 6/146 (4%) Frame = -2 Query: 3257 DCVRLVRDHDREAIVPQVTKTIVDWPVGIPRHDGLDRILEANGLKRGRPGIDAVRERSAP 3078 D +R+ +DH E + P + + +DW R +G R + A L++ R G + E+ Sbjct: 78 DGLRVAQDHYTEYVKPVLAASGLDWEFVQGRREGDVRAVVAERLRKVRRGWENKEEQDPN 137 Query: 3077 SWWDRRVNVEHNRVQRLASRRVALEPAPIDHRHGRAHVLRTVGRGILGVLVVDTK-AKVP 2901 + +E R QR + + RH LR + G LG LV + A +P Sbjct: 138 REPTKDELIEIYRQQRGIKDYEGVRGDVVIGRHTWKEYLRGLHEGWLGPLVAPAEPAPLP 197 Query: 2900 LHKVPDAI-----ICDSLAHERRREQ 2838 P A D A E++ E+ Sbjct: 198 PTPAPAAAEGSTSTEDKPAEEKKEEE 223
>Q6F9W4:OSTA_ACIAD LPS-assembly protein precursor - Acinetobacter sp. (strain ADP1)| Length = 819 Score = 33.9 bits (76), Expect = 6.7 Identities = 20/68 (29%), Positives = 35/68 (51%) Frame = -2 Query: 3602 VVAQSERVTYFVHHNVGKVATNDRVRNDPHVGAEQHASDHAVELVMRTSTHSTLVRTAAQ 3423 ++AQS+++ Y + G + +N ++ +QHA HA E + RTS ++R A Sbjct: 163 LLAQSDQINYNLKTQQGDL------KNSFYISEQQHAHGHA-EQIQRTSPTEIILRNATY 215 Query: 3422 RPCCVEQR 3399 C EQ+ Sbjct: 216 TTCPPEQK 223
>Q6DRP2:GNL3_DANRE Guanine nucleotide-binding protein-like 3 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 561 Score = 33.5 bits (75), Expect = 8.7 Identities = 18/74 (24%), Positives = 32/74 (43%) Frame = +2 Query: 293 DAQRAHEEYQMQANRRHEAQKRKQAATTQRVSVDAEEHVQSRVSRLRQPTVRAPIRPEAE 472 D +E +A +A++ K TT +AE H+ S V +++PT + +P E Sbjct: 473 DVSELPKEILTKAATTTDAEEEKMDTTTNTDEPEAESHISSTVEPIQEPTEKRKDKPAKE 532 Query: 473 KTSLPTRRPSRPLQ 514 +P +Q Sbjct: 533 VKFVPVNTDLTSMQ 546
>P24788:CD2L1_MOUSE PITSLRE serine/threonine-protein kinase CDC2L1 - Mus musculus| (Mouse) Length = 784 Score = 33.5 bits (75), Expect = 8.7 Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 4/79 (5%) Frame = +2 Query: 272 RAREKRHDAQRAHEEYQMQANRRHEAQKRKQAA----TTQRVSVDAEEHVQSRVSRLRQP 439 + +E+ H+ ++ H E Q +A R E QKR++ A +R ++ E + R +LR+ Sbjct: 125 KEKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKLREQ 184 Query: 440 TVRAPIRPEAEKTSLPTRR 496 + E E+ + R+ Sbjct: 185 QKEQREQKERERRAEERRK 203
>P22856:VL96_IRV1 L96 protein - Tipula iridescent virus (TIV) (Insect iridescent virus| type 1) Length = 867 Score = 33.5 bits (75), Expect = 8.7 Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Frame = +1 Query: 2548 RTTSPVWAAKPTSSSKRLTTANGPGTLRASRSIQRPKTPSTFPRTPSSRMVSSCPP-RSC 2724 R+ SP + +P S S R + P S S+ RPK+PS P++PS R S P R Sbjct: 493 RSKSP--SVRPKSPSAR-PRSKSPSVRSKSPSV-RPKSPSVRPKSPSVRPRSKSPSVRPK 548 Query: 2725 LRTTRRCPPVPRSSRAI 2775 + R PP P +S +I Sbjct: 549 SPSVRPPPPDPSNSPSI 565
>Q9UQ35:SRRM2_HUMAN Serine/arginine repetitive matrix protein 2 - Homo sapiens (Human)| Length = 2752 Score = 33.5 bits (75), Expect = 8.7 Identities = 21/46 (45%), Positives = 25/46 (54%) Frame = +1 Query: 3784 RSRTDTRRSQASDQGISTTRCRGSRAPHHSFSRTKTPTQRRIRTHS 3921 RSRT TRR S R R SR P SRT++P +RR R+ S Sbjct: 595 RSRTPTRRRSRSRTPARRGRSR-SRTPARRRSRTRSPVRRRSRSRS 639 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 836,198,516 Number of extensions: 19040905 Number of successful extensions: 71645 Number of sequences better than 10.0: 25 Number of HSP's gapped: 71435 Number of HSP's successfully gapped: 27 Length of query: 1577 Length of database: 100,686,439 Length adjustment: 127 Effective length of query: 1450 Effective length of database: 65,850,974 Effective search space: 95483912300 Effective search space used: 95483912300 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)