ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58h16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK073705:Os06g0138200 | 377 | e-153 | 2 | AK121038:Os10g0116900 | 100 | 3e-21 | 3 | AK060266:Os10g0116900 | 100 | 3e-21 | 4 | AY224467:Os03g0238800 | 90 | 5e-18 | 5 | Os05g0401500:Os05g0401500 | 82 | 1e-15 | 6 | AK058914:Os06g0138200 | 75 | 1e-13 | 7 | AK062459:Os11g0488500 | 37 | 0.031 | 8 | AK103909:Os11g0488500 | 35 | 0.15 | 9 | AK064292:Os11g0184900 | 35 | 0.20 | 10 | AK067897:Os03g0793100 | 32 | 1.3 | 11 | Os02g0702000:Os02g0702000 | 32 | 1.7 | 12 | AK071092:Os09g0103700 | 31 | 2.2 | 13 | AK059959:Os11g0657200 | 31 | 2.2 | 14 | AY224447: | 31 | 2.9 | 15 | AK120257:Os07g0134000 | 31 | 2.9 | 16 | AK106110:Os07g0134000 | 31 | 2.9 | 17 | AK103862:Os07g0134000 | 31 | 2.9 | 18 | AK071941:Os11g0204000 | 31 | 2.9 | 19 | AK067133:Os01g0253100 | 30 | 6.4 | 20 | AK061932:Os01g0253100 | 30 | 6.4 | 21 | Os03g0436300:Os03g0436300 | 29 | 8.4 | 22 | AK110069: | 29 | 8.4 |
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>AK073705:Os06g0138200 | Length = 616 Score = 377 bits (967), Expect(2) = e-153 Identities = 173/201 (86%), Positives = 185/201 (92%) Frame = +1 Query: 1 RVKGSLVNILAGLELHAGVFSTAEQKRIVDCVYGLQEMGKRGELGDRTYTEPEKWMRGKG 180 RV G LVNILAGLELH GVFS AEQKRIVD VY LQEMGK GELGDRTYTEP++WMRGKG Sbjct: 193 RVNGRLVNILAGLELHCGVFSAAEQKRIVDYVYDLQEMGKHGELGDRTYTEPQRWMRGKG 252 Query: 181 RVTIQFGCCYNYATDRKGNPPGIIRTFVSDPIPELFKVMIKRLVRWRILPTDCVPDSCIV 360 RVTIQFGCCYNYATD+ GNPPGIIRT SDP+P LFK+MIKRLVRW +LP C+PDSCIV Sbjct: 253 RVTIQFGCCYNYATDKNGNPPGIIRTIASDPMPSLFKIMIKRLVRWHVLPKTCIPDSCIV 312 Query: 361 NMYDPGDCIPPHIDSHDFVRPFCTVSFLSECNILFGSSLKIAGPGEFTGSFAIPLPVGSV 540 N+YDPGDCIPPHIDSHDFVRPFCTVSFLSECNILFGS+LKIAGPGEFTGS IPLPVGSV Sbjct: 313 NIYDPGDCIPPHIDSHDFVRPFCTVSFLSECNILFGSTLKIAGPGEFTGSLPIPLPVGSV 372 Query: 541 LVINGNGADVAKHCVPAVPSK 603 L++NGNGADVAKHCVPAVP+K Sbjct: 373 LILNGNGADVAKHCVPAVPTK 393 Score = 186 bits (471), Expect(2) = e-153 Identities = 119/245 (48%), Positives = 142/245 (57%), Gaps = 19/245 (7%) Frame = +3 Query: 600 QRISITFRKMDPAKRPFSFKDDPELLNITPLEAPAAPETSRSSDEGKGKQLDVQTRDPXX 779 +RISITFRKMDPAKRPF+F+DDPELLNI PLE A ET RSSDEGKGKQ D+Q R+P Sbjct: 393 KRISITFRKMDPAKRPFNFRDDPELLNIIPLET-AVQETGRSSDEGKGKQPDIQIRNPSK 451 Query: 780 XXXXXXXXXXXTTPAGKTGWGGILGDXXXXXXXXXXXXXXX---------------DRER 914 T GK G GGILGD +RER Sbjct: 452 AHRNKKSKVR--TSPGKGGRGGILGDGPPQYAQAQVTGISSQQNFHGQPTISGSSAERER 509 Query: 915 DSIGRSREPRYPXXXXXXXXXXXXXXXXXYPRDAP---SHGEDLRDRLNRLPHERTSGSG 1085 +G RE RY +DAP S+ + +R+R N L ER G+ Sbjct: 510 RPVGPLRESRYQ-------------------QDAPGMQSNMDGIRERANWLAQERMHGNS 550 Query: 1086 VLFVNNGADSQARGQRMEHRQLQMINRTINDDMDSLSFGSHEPSDQPRVSVRTIHNRP-R 1262 + +++G +SQ R QRMEHRQ+ MINRTINDDMDSLS GSHE SDQ RVSVRT++N+P R Sbjct: 551 MNSIDDGTESQERRQRMEHRQILMINRTINDDMDSLSIGSHE-SDQTRVSVRTLYNKPRR 609 Query: 1263 TRINL 1277 TR+NL Sbjct: 610 TRVNL 614
>AK121038:Os10g0116900 | Length = 595 Score = 100 bits (249), Expect = 3e-21 Identities = 69/243 (28%), Positives = 117/243 (48%) Frame = +1 Query: 4 VKGSLVNILAGLELHAGVFSTAEQKRIVDCVYGLQEMGKRGELGDRTYTEPEKWMRGKGR 183 + G +VN+L GL+L+ G E +++ V + M ++ L +T ++ M+G GR Sbjct: 184 IDGRMVNVLEGLKLYKGYVDLTEIGKVLSFVNEAKTMRRKPGLEGQTVVVAKRPMKGHGR 243 Query: 184 VTIQFGCCYNYATDRKGNPPGIIRTFVSDPIPELFKVMIKRLVRWRILPTDCVPDSCIVN 363 IQ G + +R DPIP + + + LV +++P+ PD C+++ Sbjct: 244 EIIQLGLPITEGPPEDEH----LREVKVDPIPGVLQNLFDSLVHQKVVPSS--PDYCVID 297 Query: 364 MYDPGDCIPPHIDSHDFVRPFCTVSFLSECNILFGSSLKIAGPGEFTGSFAIPLPVGSVL 543 +++ GD PH + RP CT+ L++C+++FG + G+ G + L GSVL Sbjct: 298 IFNEGDYSHPHHHPPWYGRPICTLC-LTDCDMVFGHVIAADSRGDHAGPLKLSLSTGSVL 356 Query: 544 VINGNGADVAKHCVPAVPSKGYPLPSEKWILQSVHSVSRMILNC*TLLLSKHQLHPKLAD 723 V G AD+AK +PA ++ +L SVSR + + LL + P L Sbjct: 357 VFEGKSADIAKRALPAT-------SKQRILLSFGKSVSRKHVQSESSLL----ITPPLTP 405 Query: 724 PQM 732 P M Sbjct: 406 PPM 408
>AK060266:Os10g0116900 | Length = 448 Score = 100 bits (249), Expect = 3e-21 Identities = 69/243 (28%), Positives = 117/243 (48%) Frame = +1 Query: 4 VKGSLVNILAGLELHAGVFSTAEQKRIVDCVYGLQEMGKRGELGDRTYTEPEKWMRGKGR 183 + G +VN+L GL+L+ G E +++ V + M ++ L +T ++ M+G GR Sbjct: 37 IDGRMVNVLEGLKLYKGYVDLTEIGKVLSFVNEAKTMRRKPGLEGQTVVVAKRPMKGHGR 96 Query: 184 VTIQFGCCYNYATDRKGNPPGIIRTFVSDPIPELFKVMIKRLVRWRILPTDCVPDSCIVN 363 IQ G + +R DPIP + + + LV +++P+ PD C+++ Sbjct: 97 EIIQLGLPITEGPPEDEH----LREVKVDPIPGVLQNLFDSLVHQKVVPSS--PDYCVID 150 Query: 364 MYDPGDCIPPHIDSHDFVRPFCTVSFLSECNILFGSSLKIAGPGEFTGSFAIPLPVGSVL 543 +++ GD PH + RP CT+ L++C+++FG + G+ G + L GSVL Sbjct: 151 IFNEGDYSHPHHHPPWYGRPICTLC-LTDCDMVFGHVIAADSRGDHAGPLKLSLSTGSVL 209 Query: 544 VINGNGADVAKHCVPAVPSKGYPLPSEKWILQSVHSVSRMILNC*TLLLSKHQLHPKLAD 723 V G AD+AK +PA ++ +L SVSR + + LL + P L Sbjct: 210 VFEGKSADIAKRALPAT-------SKQRILLSFGKSVSRKHVQSESSLL----ITPPLTP 258 Query: 724 PQM 732 P M Sbjct: 259 PPM 261
>AY224467:Os03g0238800 | Length = 563 Score = 89.7 bits (221), Expect = 5e-18 Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 1/197 (0%) Frame = +1 Query: 4 VKGSLVNILAGLELHAGVFSTAEQKRIVDCVYGLQEMGKRGEL-GDRTYTEPEKWMRGKG 180 + G VN + GL+++ G+ + E+ +I+ + + +RG L +T ++ M+G G Sbjct: 230 IDGKTVNAVEGLKVYEGLVNENEKNKILSLLNETKASFRRGGLEAGQTVIIGKRPMKGHG 289 Query: 181 RVTIQFGCCYNYATDRKGNPPGIIRTFVSDPIPELFKVMIKRLVRWRILPTDCVPDSCIV 360 R IQ G P R + +P L + RL + I+PT PD C++ Sbjct: 290 REIIQLGIPIVEGPPEDDYP----RETKVEAVPGLLHDLFDRLCQKEIIPTK--PDYCVI 343 Query: 361 NMYDPGDCIPPHIDSHDFVRPFCTVSFLSECNILFGSSLKIAGPGEFTGSFAIPLPVGSV 540 + Y+ GD PH + RPFCT L++C+++FG + G+ G + L GS+ Sbjct: 344 DYYNEGDYSHPHQSPPWYGRPFCTFC-LTDCDMVFGRVIS-GERGDHRGPLKLSLSTGSL 401 Query: 541 LVINGNGADVAKHCVPA 591 LV++G ADVAK +PA Sbjct: 402 LVLHGKSADVAKRAIPA 418
>Os05g0401500:Os05g0401500 | Length = 318 Score = 82.0 bits (201), Expect = 1e-15 Identities = 57/220 (25%), Positives = 91/220 (41%), Gaps = 16/220 (7%) Frame = +1 Query: 10 GSLVNILAGLELHAGVFSTAEQKRIVDCVYGLQEMGKRGELGDRTYTEPEKWMRGKGRVT 189 G VN++ GL+++ VF+T+E ++ D + +++ G+ GEL Sbjct: 18 GKTVNVVKGLKIYEDVFTTSELMKVADFINEIRQAGRNGELSGHI--------------- 62 Query: 190 IQFGCCYNYATDRKGNPPGIIRTFVSDPIPELFKVMIKRLVRWRILPTDCVPDSCIVNMY 369 + IP + + +I LV WR++P P+S I+N + Sbjct: 63 --------------------------EAIPLVLQAVIDHLVLWRLIPESRKPNSVIINFF 96 Query: 370 DPGDCIPPHIDSHDFVRPFCTVSFLSECNILFGSSLKIAGPGEFTGSFAIPLPVGSVLVI 549 D + P+ P T+ LSE + FG SL G + G + L GS+LV+ Sbjct: 97 DEDEHSQPYFKPPHLDNPISTL-LLSETTMAFGRSLVTDSNGNYKGPLTLSLKQGSLLVM 155 Query: 550 NGNGADVAKHCV----------------PAVPSKGYPLPS 621 GN AD+A+H V P+ P PLPS Sbjct: 156 RGNSADMARHVVCPSSNRRVSITFVRVRPSTPVDLSPLPS 195
>AK058914:Os06g0138200 | Length = 240 Score = 75.5 bits (184), Expect = 1e-13 Identities = 38/45 (84%), Positives = 38/45 (84%) Frame = +1 Query: 1 RVKGSLVNILAGLELHAGVFSTAEQKRIVDCVYGLQEMGKRGELG 135 RV G LVNILAGLELH GVFS AEQKRIVD VY LQEMGK GELG Sbjct: 193 RVNGRLVNILAGLELHCGVFSAAEQKRIVDYVYDLQEMGKHGELG 237
>AK062459:Os11g0488500 | Length = 155 Score = 37.4 bits (85), Expect = 0.031 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%) Frame = +1 Query: 274 IPELFKVMIKRLVRWRILPT--DCVPDSCIVNMYDPGDCIPPHID--SHDFVRPFCTVSF 441 IP+L + K++ +P+ + P++ IVN Y P D + H+D D+ +P ++S Sbjct: 12 IPDLLSALAKKMAI-PAMPSGEEFKPEAAIVNYYGPSDMLGGHVDDMEADWSKPIVSISL 70 Query: 442 LSECNILFGSSLKIAGPGEFTGSFAIPLPVGSVLVINGNGADVAKHCVPAVP 597 +C L G + P A+ L G ++++ G A+ C VP Sbjct: 71 GCKCIFLLGGKTRDEVP------TAMFLRSGDIVLMAGE----ARECFHGVP 112
>AK103909:Os11g0488500 | Length = 325 Score = 35.0 bits (79), Expect = 0.15 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 4/73 (5%) Frame = +1 Query: 274 IPELFKVMIKRLVRWRILPT--DCVPDSCIVNMYDPGDCIPPHID--SHDFVRPFCTVSF 441 IP+L + K++ +P+ + P++ IVN Y P D + H+D D+ +P ++S Sbjct: 223 IPDLLSALAKKMAI-PAMPSGEEFKPEAAIVNYYGPSDMLGGHVDDMEADWSKPIVSISL 281 Query: 442 LSECNILFGSSLK 480 +C L G + Sbjct: 282 GCKCIFLLGGKTR 294
>AK064292:Os11g0184900 | Length = 127 Score = 34.7 bits (78), Expect = 0.20 Identities = 28/82 (34%), Positives = 37/82 (45%) Frame = +1 Query: 985 GRGSQDIRVTRHLMGRTSETG*TGCLMRGRLAAACYSSTMVRTLRPGGNGWSTGSYR*SI 1164 GR + R T GRTS G G R R ++ + R RP G+ ST S Sbjct: 40 GRTGRRGRGTGRRRGRTSRWGRRG-RWRSRRRSSSTPGSRPRASRPTGSCTSTAS----- 93 Query: 1165 APSTMTWTPSPSGAMSPPTSPA 1230 T T P P+ + SPPT+P+ Sbjct: 94 --PTSTAPPPPASSPSPPTTPS 113
>AK067897:Os03g0793100 | Length = 268 Score = 32.0 bits (71), Expect = 1.3 Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 9/89 (10%) Frame = -1 Query: 608 YPLDGTAG---TQCFATSAPLPFMTSTDPTGRGI-----ANEPVNSPGPA-IFRLDPKSM 456 +PL TA T C A LP + +T P G G+ A E V++ PA + L SM Sbjct: 145 WPLPRTASPPPTPCSPADALLPSLAATSPVGEGLDGDVTAGEEVDAGLPAPLACLPHPSM 204 Query: 455 LHSLRNETVQNGRTKSWLSICGGMQSPGS 369 LR NG + W Q P S Sbjct: 205 AVRLRACGFCNGGREQWRRRVASRQPPSS 233
>Os02g0702000:Os02g0702000 | Length = 820 Score = 31.6 bits (70), Expect = 1.7 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -1 Query: 1085 AAARRPLMRQP--VQPVSEVLPMRWRVTRISWLPRPLSGVPFSVRT 954 AA R +R P V P E LP +WR +RI+WL + L S T Sbjct: 90 AADEREAVRSPELVVPELEELPEQWRRSRIAWLCKELPAYKHSTFT 135
>AK071092:Os09g0103700 | Length = 377 Score = 31.2 bits (69), Expect = 2.2 Identities = 24/82 (29%), Positives = 34/82 (41%) Frame = +3 Query: 1011 DAPSHGEDLRDRLNRLPHERTSGSGVLFVNNGADSQARGQRMEHRQLQMINRTINDDMDS 1190 D H + +DR R H R+ + + G D +R HR+ Q +R D DS Sbjct: 272 DKKRHRKSRKDRKRRRSHRRSDDTSDEDESGGEDR----RRRRHRKRQHHHRKGASDGDS 327 Query: 1191 LSFGSHEPSDQPRVSVRTIHNR 1256 S S D+ R S R H + Sbjct: 328 GSGASDSADDRKRSSRRRRHRK 349
>AK059959:Os11g0657200 | Length = 259 Score = 31.2 bits (69), Expect = 2.2 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 7/91 (7%) Frame = +1 Query: 346 DSCIVNMYDPGDCIPPHIDSHDFVRPFCTVSFLSECNILFG---SSLKIAGPGEFTGSFA 516 D I N Y+PG+ I H+D F VS S C + F + I E + Sbjct: 141 DQMIANRYEPGEGICAHVDLMRFDDGIAIVSLESPCVMHFSRAEQEVPICETLESVHAEP 200 Query: 517 IPLPV----GSVLVINGNGADVAKHCVPAVP 597 +PV GS+++++G+ + KH + P Sbjct: 201 TKIPVYLNPGSLVLMSGDARYLWKHEINRKP 231
>AY224447: | Length = 305 Score = 30.8 bits (68), Expect = 2.9 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 Query: 1040 SEVLPMRWRVTRISWLPRPLSGVPFSVRTWWISWL 936 S VL + W + ++ W+ P V FSV TW+ S L Sbjct: 23 SGVLSLAWAIAQLGWVIGPAVLVAFSVITWFCSSL 57
>AK120257:Os07g0134000 | Length = 487 Score = 30.8 bits (68), Expect = 2.9 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 Query: 1040 SEVLPMRWRVTRISWLPRPLSGVPFSVRTWWISWL 936 S VL + W + ++ W+ P V FSV TW+ S L Sbjct: 57 SGVLSLAWAIAQLGWVIGPAVLVAFSVITWFCSSL 91
>AK106110:Os07g0134000 | Length = 487 Score = 30.8 bits (68), Expect = 2.9 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 Query: 1040 SEVLPMRWRVTRISWLPRPLSGVPFSVRTWWISWL 936 S VL + W + ++ W+ P V FSV TW+ S L Sbjct: 57 SGVLSLAWAIAQLGWVIGPAVLVAFSVITWFCSSL 91
>AK103862:Os07g0134000 | Length = 460 Score = 30.8 bits (68), Expect = 2.9 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 Query: 1040 SEVLPMRWRVTRISWLPRPLSGVPFSVRTWWISWL 936 S VL + W + ++ W+ P V FSV TW+ S L Sbjct: 30 SGVLSLAWAIAQLGWVIGPAVLVAFSVITWFCSSL 64
>AK071941:Os11g0204000 | Length = 127 Score = 30.8 bits (68), Expect = 2.9 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = +1 Query: 631 ILQSVHSVSRMILNC*TLLLSKHQLHPKLADPQMKARGSSLMYKLG 768 +L HS+SR L ++L QLH + QM AR SS++Y+LG Sbjct: 32 LLLPAHSLSRFSLK--SVLPPSAQLHAQDVFDQMPARQSSVLYQLG 75
>AK067133:Os01g0253100 | Length = 708 Score = 29.6 bits (65), Expect = 6.4 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Frame = +1 Query: 1090 YSSTMVRTLRPGGNGWSTGSYR*SIAPSTMTWTPS-PSGAMSPPTSPA*ACGPYTTDQGL 1266 YSS ++ P + S S + P + T + PSG + PP SP AC + Q Sbjct: 87 YSSPATLSVHPPMSAPSYSSISDAAPPDAASNTSAAPSGLVQPPVSPHNACCSHNMVQKR 146 Query: 1267 E*IWVGSQPYHV*LVVSVLKIFGRNVGKVYRYLETGKGKL 1386 GSQ H V V ++F RNV + + G+L Sbjct: 147 -----GSQDCHCVYPVRV-ELFLRNVSLTSNWSDEFLGEL 180
>AK061932:Os01g0253100 | Length = 662 Score = 29.6 bits (65), Expect = 6.4 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 1/100 (1%) Frame = +1 Query: 1090 YSSTMVRTLRPGGNGWSTGSYR*SIAPSTMTWTPS-PSGAMSPPTSPA*ACGPYTTDQGL 1266 YSS ++ P + S S + P + T + PSG + PP SP AC + Q Sbjct: 41 YSSPATLSVHPPMSAPSYSSISDAAPPDAASNTSAAPSGLVQPPVSPHNACCSHNMVQKR 100 Query: 1267 E*IWVGSQPYHV*LVVSVLKIFGRNVGKVYRYLETGKGKL 1386 GSQ H V V ++F RNV + + G+L Sbjct: 101 -----GSQDCHCVYPVRV-ELFLRNVSLTSNWSDEFLGEL 134
>Os03g0436300:Os03g0436300 | Length = 608 Score = 29.3 bits (64), Expect = 8.4 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Frame = -1 Query: 551 FMTSTDPTGRGIANEPVNSPGPAIFRLDPKSMLHSLRNETVQNGRT--KSWLSICGGMQS 378 F T G G++ + P P IF +DP S L ET +N +S L GG Sbjct: 482 FPTQVSTDGFGLSQSSI--PSPDIFSIDPSSALDPCPLETAENNENQYQSELPPLGGHAP 539 Query: 377 P 375 P Sbjct: 540 P 540
>AK110069: | Length = 788 Score = 29.3 bits (64), Expect = 8.4 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = -1 Query: 617 GNGYPLDGTAGTQCFATSAPLPFM--TSTDPTGRGIANEPVNSPGPA 483 GNGY + + +S+ LP S G G+ + PVN+P P+ Sbjct: 32 GNGYQVGEVSSAAPVVSSSALPAAPPVSAGGNGYGVPSAPVNTPAPS 78 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 49,471,290 Number of extensions: 1232001 Number of successful extensions: 3875 Number of sequences better than 10.0: 22 Number of HSP's gapped: 3861 Number of HSP's successfully gapped: 25 Length of query: 539 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 434 Effective length of database: 11,195,550 Effective search space: 4858868700 Effective search space used: 4858868700 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
