ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58g08 |
|---|---|
| Clone Library Name | barley_pub |
>Q89BK7:PPCK_BRAJA Phosphoenolpyruvate carboxykinase [ATP] - Bradyrhizobium japonicum| Length = 538 Score = 36.6 bits (83), Expect = 0.32 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 7/83 (8%) Frame = +1 Query: 844 VIKSCTEIQDV-LVSTDSGVVISSKQSTV---LFPTKSR---APQLFTKPAXXXXXXXXX 1002 V+++C +D +V D G + +S P SR APQ P Sbjct: 298 VLENCVLDEDTRVVDFDDGSKTENTRSAYPLDFIPNASRTGRAPQ----PKNVVMLAADA 353 Query: 1003 XXALPLVSKLSPGQAAYHFLAGY 1071 LP ++KLSP QA YHFL+GY Sbjct: 354 FGVLPPIAKLSPAQAMYHFLSGY 376
>Q2GCV3:FOLD_NEOSM Bifunctional protein folD [Includes: Methylenetetrahydrofolate| dehydrogenase - Neorickettsia sennetsu (strain Miyayama) Length = 298 Score = 36.2 bits (82), Expect = 0.41 Identities = 53/230 (23%), Positives = 92/230 (40%), Gaps = 17/230 (7%) Frame = +1 Query: 91 PPRRILAGGDPPAIPVLLPSKQR---------ETIALPREDQEVSY-----GLNWAIATR 228 P R++ G+ PA V + SKQ+ ETIALP++ EV LN + Sbjct: 33 PSLRVIIVGENPASQVYVRSKQKKAESLGIDAETIALPKDTSEVELIRLVNSLNDDTSIN 92 Query: 229 GVVVKDKVFYNLEPSELQKSGTTCAERLSGTPLHVKGNVIGGFPD-ISRGQFAK--LLKQ 399 ++V+ + ++ P+ + +S + K +V P+ + R +K LLK Sbjct: 93 AILVQLPLPPHINPTRIIES------------IDSKKDVDCFHPENVGRLALSKDALLKP 140 Query: 400 VTFHLSSISSLYVQDGAIGSSTECDAKVRVISDNPSAIMSLSNILQKTPDRAISHDTCPL 579 T SLY+ A+G + +S + ++ SNI+ K + H+ C Sbjct: 141 CT----PAGSLYLIKSALGDN---------LSGMDAVVIGRSNIVGKPMAMLLLHENC-- 185 Query: 580 TIYVASSISTNVRNALGSGTQYANGVAVADIERSSLILCGKAFADSAMLK 729 TI + S + N++ + V + + I G D M K Sbjct: 186 TITLTHSKTRNIQEKTRQADIVISAVGIPHFVKKDFIKPGATVIDVGMNK 235
>Q2S1I3:PPCK1_SALRD Phosphoenolpyruvate carboxykinase [ATP] 1 - Salinibacter ruber| (strain DSM 13855) Length = 535 Score = 35.0 bits (79), Expect = 0.92 Identities = 15/20 (75%), Positives = 17/20 (85%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 LP VS+LSP QA YHFL+GY Sbjct: 355 LPPVSELSPAQAMYHFLSGY 374
>Q7RVS9:PPCK_NEUCR Phosphoenolpyruvate carboxykinase [ATP] - Neurospora crassa| Length = 561 Score = 34.7 bits (78), Expect = 1.2 Identities = 25/95 (26%), Positives = 42/95 (44%) Frame = +1 Query: 409 HLSSISSLYVQDGAIGSSTECDAKVRVISDNPSAIMSLSNILQKTPDRAISHDTCPLTIY 588 +L++ + +YV DG G + +VRV+ + + N+L + P + H TIY Sbjct: 126 YLNTRNRIYVVDGYAGWDEKYRIRVRVVCARAYHALFMRNMLIRPPREELEHFHPDYTIY 185 Query: 589 VASSISTNVRNALGSGTQYANGVAVADIERSSLIL 693 A S N G + VA+ E+ +IL Sbjct: 186 NAGSFPA---NRYTEGMSSSTSVAINFAEKEMVIL 217
>Q8REI2:PPCK_FUSNN Phosphoenolpyruvate carboxykinase [ATP] - Fusobacterium nucleatum| subsp. nucleatum Length = 525 Score = 34.7 bits (78), Expect = 1.2 Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 13/78 (16%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGYQDG-------------KFVPAYNRAPSPFDQLALANSLFL 1152 LP +S+LS A YHF+ G+ F + P D A L Sbjct: 348 LPPISRLSQEAAMYHFVTGFTAKLAGTELGVKEPVPTFSTCFGEPFMPMDPSVYAEMLGE 407 Query: 1153 HLKKDKTPTYLINAKSSG 1206 LKK T YLIN SG Sbjct: 408 RLKKHNTKVYLINTGWSG 425
>Q9XFA2:PEPC2_UROPA Phosphoenolpyruvate carboxykinase [ATP] 2 - Urochloa panicoides| (Panic liverseed grass) Length = 626 Score = 34.7 bits (78), Expect = 1.2 Identities = 37/160 (23%), Positives = 68/160 (42%), Gaps = 3/160 (1%) Frame = +1 Query: 361 DISRGQFAKLLKQVTFHLSSISSLYVQDGAIGSSTECDAKVRVISDNPSAIMSLSNI-LQ 537 ++ QF ++ +L+S+ +YV D + +E KVR+I+ + + N+ ++ Sbjct: 171 EMDERQFVINRERALDYLNSLDKVYVNDQFLNWDSENRIKVRIITSRAYHALFMHNMCIR 230 Query: 538 KTPDRAISHDTCPLTIYVASSISTN-VRNALGSGTQYANGVAVADIERSSLILCGKAFAD 714 T + S T TIY A N N + S T +A R +++ G +A Sbjct: 231 PTEEELESFGTPDFTIYNAGEFPANRYANYMTSSTSINISLA-----RREMVILGTQYAG 285 Query: 715 SAMLKDALTALAAPILSARGGLPV-PGWLLSSGGFIVLLF 831 +K L + ++ RG L + G + G + L F Sbjct: 286 E--MKKGLFGVMHYLMPKRGILSLHSGCNMGKEGDVALFF 323
>Q9K7Q7:PPCK_BACHD Phosphoenolpyruvate carboxykinase [ATP] - Bacillus halodurans| Length = 527 Score = 34.3 bits (77), Expect = 1.6 Identities = 14/20 (70%), Positives = 17/20 (85%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 LP +SKL+P QA YHFL+GY Sbjct: 353 LPPISKLTPEQAMYHFLSGY 372
>Q215Y7:Y2245_RHOPB UPF0078 membrane protein RPC_2245 - Rhodopseudomonas palustris| (strain BisB18) Length = 196 Score = 33.9 bits (76), Expect = 2.0 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%) Frame = +1 Query: 565 DTCPLTI-YVASSISTNVRNALGSGTQYANGVAVADIERSSLILCG-KAFADSAMLKDAL 738 DT L + Y+ SI + +GTQ + +I ++++ G K A + +L DAL Sbjct: 5 DTASLIVGYLLGSIPFGLILTRLAGTQDLRSIGSGNIGATNVLRTGRKGLAAATLLGDAL 64 Query: 739 TALAAPILSARGGLPVPGWLLSSGGFIVLLF 831 AA +++A G P L + G F+ LF Sbjct: 65 KGTAAVLIAASLGGPEAAMLAALGAFLGHLF 95
>O60784:TOM1_HUMAN Target of Myb protein 1 - Homo sapiens (Human)| Length = 492 Score = 33.9 bits (76), Expect = 2.0 Identities = 33/139 (23%), Positives = 58/139 (41%) Frame = +1 Query: 7 SDRPGGARTDGRAASRQPESEAHAGPSPPPRRILAGGDPPAIPVLLPSKQRETIALPRED 186 S+ G + G +S+Q +S HA P P P + GD P P E I R + Sbjct: 172 SETQSGQDSVGTDSSQQEDSGQHAAPLPAPP--ILSGDTPIAPT------PEQIGKLRSE 223 Query: 187 QEVSYGLNWAIATRGVVVKDKVFYNLEPSELQKSGTTCAERLSGTPLHVKGNVIGGFPDI 366 E+ G V V ++ L P++ + + + L+ T ++ V+ P I Sbjct: 224 LEMVSG--------NVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQI 275 Query: 367 SRGQFAKLLKQVTFHLSSI 423 + Q + L V +L+++ Sbjct: 276 ANEQLTEELLIVNDNLNNV 294
>Q4L9P0:SRAP_STAHJ Serine-rich adhesin for platelets precursor - Staphylococcus| haemolyticus (strain JCSC1435) Length = 3608 Score = 33.9 bits (76), Expect = 2.0 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 2/113 (1%) Frame = +1 Query: 412 LSSISSLYVQDGAIGSSTECDAKVRVISDNPSAIMSLSNILQKTPDRAISHDTCPLTIYV 591 LS +S V D S++ D+ +SD+ SA SLS + + S T + Sbjct: 617 LSGSTSTSVSDSTSASTSLSDSASTSVSDSTSASTSLSASTSTSESDSTSASTS-----L 671 Query: 592 ASSISTNVRNALGSGTQYAN--GVAVADIERSSLILCGKAFADSAMLKDALTA 744 + S ST++ ++L + T ++ +V+D +S L G ++SA L D+ +A Sbjct: 672 SESTSTSLSDSLSASTSLSDSASTSVSDSTSASTSLSG---SESASLSDSASA 721
>Q9Y618:NCOR2_HUMAN Nuclear receptor corepressor 2 - Homo sapiens (Human)| Length = 2517 Score = 33.9 bits (76), Expect = 2.0 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 5/59 (8%) Frame = +1 Query: 16 PGGARTDGRAASRQP-----ESEAHAGPSPPPRRILAGGDPPAIPVLLPSKQRETIALP 177 P G T R SR P SEA P+PPP PP +P K+ ET A P Sbjct: 779 PPGPPTPPRRTSRAPIEPTPASEATGAPTPPPAPPSPSAPPPVVP--KEEKEEETAAAP 835
>Q6HCB3:PPCK_BACHK Phosphoenolpyruvate carboxykinase [ATP] - Bacillus thuringiensis| subsp. konkukian Length = 528 Score = 33.5 bits (75), Expect = 2.7 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 13/78 (16%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY-------------QDGKFVPAYNRAPSPFDQLALANSLFL 1152 LP +SKLS QA YHFL+GY F + P D A L Sbjct: 353 LPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGE 412 Query: 1153 HLKKDKTPTYLINAKSSG 1206 ++K +L+N +G Sbjct: 413 KIEKHDAKVFLVNTGWTG 430
>Q632S4:PPCK_BACCZ Phosphoenolpyruvate carboxykinase [ATP] - Bacillus cereus (strain ZK| / E33L) Length = 528 Score = 33.5 bits (75), Expect = 2.7 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 13/78 (16%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY-------------QDGKFVPAYNRAPSPFDQLALANSLFL 1152 LP +SKLS QA YHFL+GY F + P D A L Sbjct: 353 LPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGE 412 Query: 1153 HLKKDKTPTYLINAKSSG 1206 ++K +L+N +G Sbjct: 413 KIEKHDAKVFLVNTGWTG 430
>Q816Q7:PPCK_BACCR Phosphoenolpyruvate carboxykinase [ATP] - Bacillus cereus (strain| ATCC 14579 / DSM 31) Length = 528 Score = 33.5 bits (75), Expect = 2.7 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 13/78 (16%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY-------------QDGKFVPAYNRAPSPFDQLALANSLFL 1152 LP +SKLS QA YHFL+GY F + P D A L Sbjct: 353 LPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGE 412 Query: 1153 HLKKDKTPTYLINAKSSG 1206 ++K +L+N +G Sbjct: 413 KIEKHDAKVFLVNTGWTG 430
>Q72YV4:PPCK_BACC1 Phosphoenolpyruvate carboxykinase [ATP] - Bacillus cereus (strain| ATCC 10987) Length = 528 Score = 33.5 bits (75), Expect = 2.7 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 13/78 (16%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY-------------QDGKFVPAYNRAPSPFDQLALANSLFL 1152 LP +SKLS QA YHFL+GY F + P D A L Sbjct: 353 LPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGE 412 Query: 1153 HLKKDKTPTYLINAKSSG 1206 ++K +L+N +G Sbjct: 413 KIEKHDAKVFLVNTGWTG 430
>Q81KH8:PPCK_BACAN Phosphoenolpyruvate carboxykinase [ATP] - Bacillus anthracis| Length = 528 Score = 33.5 bits (75), Expect = 2.7 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 13/78 (16%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY-------------QDGKFVPAYNRAPSPFDQLALANSLFL 1152 LP +SKLS QA YHFL+GY F + P D A L Sbjct: 353 LPPISKLSKEQAMYHFLSGYTSKLAGTERGVTSPQATFSTCFGSPFLPLDASRYAEMLGE 412 Query: 1153 HLKKDKTPTYLINAKSSG 1206 ++K +L+N +G Sbjct: 413 KIEKHDAKVFLVNTGWTG 430
>Q8WUP2:FBLI1_HUMAN Filamin-binding LIM protein 1 - Homo sapiens (Human)| Length = 373 Score = 33.5 bits (75), Expect = 2.7 Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 13/61 (21%) Frame = +1 Query: 13 RPGGARTDGRAASRQPES--EAHAGPSPPPRRILAGGD-----------PPAIPVLLPSK 153 RP T GRAA+ P + + G PPP +L G D PP PVLLPS+ Sbjct: 59 RPSPWTTPGRAAATVPAAPMQLFNGGCPPPPPVLDGEDVLPDLDLLPPPPPPPPVLLPSE 118 Query: 154 Q 156 + Sbjct: 119 E 119
>P10963:PPCK_YEAST Phosphoenolpyruvate carboxykinase [ATP] - Saccharomyces cerevisiae| (Baker's yeast) Length = 549 Score = 33.1 bits (74), Expect = 3.5 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 13/78 (16%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY-------------QDGKFVPAYNRAPSPFDQLALANSLFL 1152 LP VSKL+P Q YHF++GY + F + + + A L Sbjct: 371 LPPVSKLTPEQVMYHFISGYTSKMAGTEQGVTEPEPTFSSCFGQPFLALHPIRYATMLAT 430 Query: 1153 HLKKDKTPTYLINAKSSG 1206 + + K YLIN +G Sbjct: 431 KMSQHKANAYLINTGWTG 448
>Q9ZNH4:PPCK_RHOPA Phosphoenolpyruvate carboxykinase [ATP] - Rhodopseudomonas palustris| Length = 537 Score = 33.1 bits (74), Expect = 3.5 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 +P ++KL+P QA YHFL+GY Sbjct: 357 MPPIAKLTPAQAMYHFLSGY 376
>P43086:PPCK_RHISN Phosphoenolpyruvate carboxykinase [ATP] - Rhizobium sp. (strain| NGR234) Length = 537 Score = 33.1 bits (74), Expect = 3.5 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 LP ++KL+P QA YHFL+GY Sbjct: 356 LPPIAKLTPEQAMYHFLSGY 375
>P43085:PPCK_RHIME Phosphoenolpyruvate carboxykinase [ATP] - Rhizobium meliloti| (Sinorhizobium meliloti) Length = 536 Score = 33.1 bits (74), Expect = 3.5 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 LP ++KL+P QA YHFL+GY Sbjct: 356 LPPIAKLTPEQAMYHFLSGY 375
>Q98CL7:PPCK_RHILO Phosphoenolpyruvate carboxykinase [ATP] - Rhizobium loti| (Mesorhizobium loti) Length = 536 Score = 33.1 bits (74), Expect = 3.5 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 1/142 (0%) Frame = +1 Query: 364 ISRGQFAKLLKQVTFHLSSISSLYVQDGAIGSSTECDAKVRVISDNPSAIMSLSNILQKT 543 IS QF L H ++ LYVQD G+ E RVI++ + + N+L + Sbjct: 86 ISPAQFETLFADFLAHAAN-KDLYVQDLVGGADAELKLPTRVITEFAWHSLFIRNLLIR- 143 Query: 544 PDRAISHDTCP-LTIYVASSISTNVRNALGSGTQYANGVAVADIERSSLILCGKAFADSA 720 PD+A P +TI S + GS T+ V D+ R +++ G ++A Sbjct: 144 PDKAELGQFVPEMTIIDLPSFRADPARH-GSRTE---TVIAVDLTRQIVLIGGTSYAGE- 198 Query: 721 MLKDALTALAAPILSARGGLPV 786 +K ++ + IL +G +P+ Sbjct: 199 -MKKSVFTMLNYILPQKGVMPM 219 Score = 32.0 bits (71), Expect = 7.8 Identities = 11/20 (55%), Positives = 17/20 (85%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 +P +++L+P QA YHFL+GY Sbjct: 356 MPPIARLTPAQAMYHFLSGY 375
>Q5HUM7:PPCK_CAMJR Phosphoenolpyruvate carboxykinase [ATP] - Campylobacter jejuni| (strain RM1221) Length = 524 Score = 33.1 bits (74), Expect = 3.5 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 13/78 (16%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY-------------QDGKFVPAYNRAPSPFDQLALANSLFL 1152 LP VSKLS QA Y+FL+GY F + P A L Sbjct: 348 LPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGE 407 Query: 1153 HLKKDKTPTYLINAKSSG 1206 ++K + YL+N SG Sbjct: 408 KIEKHEVNVYLVNTGWSG 425
>Q9PP01:PPCK_CAMJE Phosphoenolpyruvate carboxykinase [ATP] - Campylobacter jejuni| Length = 524 Score = 33.1 bits (74), Expect = 3.5 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 13/78 (16%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY-------------QDGKFVPAYNRAPSPFDQLALANSLFL 1152 LP VSKLS QA Y+FL+GY F + P A L Sbjct: 348 LPPVSKLSKEQAMYYFLSGYTAKVAGTERGITEPQATFSACFGEPFMPLHPTVYARLLGE 407 Query: 1153 HLKKDKTPTYLINAKSSG 1206 ++K + YL+N SG Sbjct: 408 KIEKHEVNVYLVNTGWSG 425
>Q8FY05:PPCK_BRUSU Phosphoenolpyruvate carboxykinase [ATP] - Brucella suis| Length = 536 Score = 33.1 bits (74), Expect = 3.5 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 +P ++KL+P QA YHFL+GY Sbjct: 356 MPPIAKLTPAQAMYHFLSGY 375
>Q8YE41:PPCK_BRUME Phosphoenolpyruvate carboxykinase [ATP] - Brucella melitensis| Length = 536 Score = 33.1 bits (74), Expect = 3.5 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 +P ++KL+P QA YHFL+GY Sbjct: 356 MPPIAKLTPAQAMYHFLSGY 375
>Q2S008:PPCK2_SALRD Phosphoenolpyruvate carboxykinase [ATP] 2 - Salinibacter ruber| (strain DSM 13855) Length = 530 Score = 33.1 bits (74), Expect = 3.5 Identities = 13/20 (65%), Positives = 17/20 (85%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 +P VSKL+P QA YHF++GY Sbjct: 352 MPPVSKLTPEQAMYHFISGY 371
>Q3SVS4:PPCK_NITWN Phosphoenolpyruvate carboxykinase [ATP] - Nitrobacter winogradskyi| (strain Nb-255 / ATCC 25391) Length = 538 Score = 32.7 bits (73), Expect = 4.6 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 LP +++L+P QA YHFL+GY Sbjct: 357 LPPIARLTPAQAMYHFLSGY 376
>O43112:PPCK_KLULA Phosphoenolpyruvate carboxykinase [ATP] - Kluyveromyces lactis| (Yeast) (Candida sphaerica) Length = 543 Score = 32.7 bits (73), Expect = 4.6 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 LP VSKL+P Q YHF++GY Sbjct: 365 LPPVSKLTPDQVMYHFISGY 384
>Q500D1:PPCK_PSEU2 Phosphoenolpyruvate carboxykinase [ATP] - Pseudomonas syringae pv.| syringae (strain B728a) Length = 514 Score = 32.3 bits (72), Expect = 6.0 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +1 Query: 889 DSGVVISSKQSTVLFPTKSRAPQ-LFTKPAXXXXXXXXXXXALPLVSKLSPGQAAYHFLA 1065 DS + +S+ + + RAP+ L +P LP VS LS QAAYHFL+ Sbjct: 298 DSSLTQNSRAAYPRELIEKRAPKNLGGEPNAVIFLTCDLTGVLPPVSILSEEQAAYHFLS 357 Query: 1066 GY 1071 GY Sbjct: 358 GY 359
>Q88AZ4:PPCK_PSESM Phosphoenolpyruvate carboxykinase [ATP] - Pseudomonas syringae pv.| tomato Length = 514 Score = 32.3 bits (72), Expect = 6.0 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +1 Query: 889 DSGVVISSKQSTVLFPTKSRAPQ-LFTKPAXXXXXXXXXXXALPLVSKLSPGQAAYHFLA 1065 DS + +S+ + + RAP+ L +P LP VS LS QAAYHFL+ Sbjct: 298 DSSLTQNSRAAYPRELIEKRAPKNLGGEPNAVIFLTCDLTGVLPPVSILSEEQAAYHFLS 357 Query: 1066 GY 1071 GY Sbjct: 358 GY 359
>Q48BY7:PPCK_PSE14 Phosphoenolpyruvate carboxykinase [ATP] - Pseudomonas syringae pv.| phaseolicola (strain 1448A / Race 6) Length = 514 Score = 32.3 bits (72), Expect = 6.0 Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%) Frame = +1 Query: 889 DSGVVISSKQSTVLFPTKSRAPQ-LFTKPAXXXXXXXXXXXALPLVSKLSPGQAAYHFLA 1065 DS + +S+ + + RAP+ L +P LP VS LS QAAYHFL+ Sbjct: 298 DSSLTQNSRAAYPRELIEKRAPKNLGGEPNAVIFLTCDLTGVLPPVSILSEEQAAYHFLS 357 Query: 1066 GY 1071 GY Sbjct: 358 GY 359
>Q6LLS2:PPCK_PHOPR Phosphoenolpyruvate carboxykinase [ATP] - Photobacterium profundum| (Photobacterium sp. (strain SS9)) Length = 530 Score = 32.3 bits (72), Expect = 6.0 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 LP VSKL+P Q YHFL+G+ Sbjct: 357 LPPVSKLTPAQTKYHFLSGF 376
>Q2G480:PPCK_NOVAD Phosphoenolpyruvate carboxykinase [ATP] - Novosphingobium| aromaticivorans (strain DSM 12444) Length = 534 Score = 32.3 bits (72), Expect = 6.0 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 LP +++L+P QA YHFL+GY Sbjct: 356 LPPIARLTPDQAMYHFLSGY 375
>Q39QU2:PPCK_GEOMG Phosphoenolpyruvate carboxykinase [ATP] - Geobacter metallireducens| (strain GS-15 / ATCC 53774 / DSM 7210) Length = 530 Score = 32.3 bits (72), Expect = 6.0 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 LP +++L+P QA YHFL+GY Sbjct: 358 LPPIARLTPDQAMYHFLSGY 377
>Q6FRR0:PPCK_CANGA Phosphoenolpyruvate carboxykinase [ATP] - Candida glabrata (Yeast)| (Torulopsis glabrata) Length = 544 Score = 32.3 bits (72), Expect = 6.0 Identities = 13/20 (65%), Positives = 16/20 (80%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 LP VSKL+P Q YHF++GY Sbjct: 367 LPPVSKLTPEQVMYHFISGY 386
>Q8UJ94:PPCK_AGRT5 Phosphoenolpyruvate carboxykinase [ATP] - Agrobacterium tumefaciens| (strain C58 / ATCC 33970) Length = 536 Score = 32.3 bits (72), Expect = 6.0 Identities = 48/215 (22%), Positives = 84/215 (39%), Gaps = 25/215 (11%) Frame = +1 Query: 217 IATRGVVVKDKVFYNLEPSELQKSGTTCAER---LSGTPLHVKGNVIGGFPD-------- 363 +A G+ +VFYNL SEL + E + G V G G P Sbjct: 13 VAELGLGEASRVFYNLNESELYEHAIRNGEAELTIDGALRAVTGQHTGRSPKDKFVVRDA 72 Query: 364 -------------ISRGQFAKLLKQVTFHLSSISSLYVQDGAIGSSTECDAKVRVISDNP 504 +S F L + + H + +LYVQD G+ E RV+++ Sbjct: 73 STENTIWWDNNKPLSPENFELLRQDMLAHAAG-KTLYVQDLIGGADEENALPTRVVTELA 131 Query: 505 SAIMSLSNILQKTPDRAISHDTCPLTIYVASSISTN-VRNALGSGTQYANGVAVADIERS 681 + + N+L + +S + LTI S + R+ + S T V D+ Sbjct: 132 WHSLFIRNLLIRPKRETLSGFSQKLTIINLPSFKADPARHGVRSET-----VIACDLTNG 186 Query: 682 SLILCGKAFADSAMLKDALTALAAPILSARGGLPV 786 +++ G ++A K ++ + +L A+G +P+ Sbjct: 187 LVLIGGTSYAGEN--KKSVFTVLNYLLPAKGVMPM 219 Score = 32.0 bits (71), Expect = 7.8 Identities = 12/20 (60%), Positives = 17/20 (85%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 LP +++L+P QA YHFL+GY Sbjct: 356 LPPIARLTPEQAMYHFLSGY 375
>P36940:TNFL6_RAT Tumor necrosis factor ligand superfamily member 6 - Rattus| norvegicus (Rat) Length = 278 Score = 32.0 bits (71), Expect = 7.8 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = +1 Query: 16 PGGARTDGRAASRQPESEAHAGPSPPPRRILAGGDPPAIPVLLPSKQRETIAL 174 PG + + R P P PPP + PP +P L P K+++ I L Sbjct: 26 PGSVFSCPSSGPRGPGQRRPPPPPPPPSPLPPPSQPPPLPPLSPLKKKDNIEL 78
>Q8F9E4:PPCK_LEPIN Phosphoenolpyruvate carboxykinase [ATP] - Leptospira interrogans| Length = 530 Score = 32.0 bits (71), Expect = 7.8 Identities = 15/20 (75%), Positives = 16/20 (80%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 LP VSKLS QA YHFL+GY Sbjct: 354 LPPVSKLSIEQAMYHFLSGY 373
>Q72VT0:PPCK_LEPIC Phosphoenolpyruvate carboxykinase [ATP] - Leptospira interrogans| serogroup Icterohaemorrhagiae serovar copenhageni Length = 530 Score = 32.0 bits (71), Expect = 7.8 Identities = 15/20 (75%), Positives = 16/20 (80%) Frame = +1 Query: 1012 LPLVSKLSPGQAAYHFLAGY 1071 LP VSKLS QA YHFL+GY Sbjct: 354 LPPVSKLSIEQAMYHFLSGY 373
>Q9CM50:NPD_PASMU NAD-dependent deacetylase - Pasteurella multocida| Length = 234 Score = 32.0 bits (71), Expect = 7.8 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Frame = -2 Query: 1273 QKLKLNK*IINEDKCKLYRQFAFRSSWH*SDKL--VSCLFSNAKIRNWQGQAGQMERVPC 1100 +KL N I+ ++ L+ + ++ H +L V C+ S KI +WQG G+ ++ C Sbjct: 82 KKLGDNLLIVTQNVDNLHERAGSKNLIHMHGELLKVRCVKSG-KIYDWQGDIGEHDKCLC 140 Query: 1099 CKLGQICHPDI 1067 C QI P I Sbjct: 141 CTPTQILRPHI 151
>O95071:EDD1_HUMAN E3 ubiquitin-protein ligase EDD1 - Homo sapiens (Human)| Length = 2799 Score = 32.0 bits (71), Expect = 7.8 Identities = 24/97 (24%), Positives = 42/97 (43%) Frame = +1 Query: 31 TDGRAASRQPESEAHAGPSPPPRRILAGGDPPAIPVLLPSKQRETIALPREDQEVSYGLN 210 T+ + S+Q + GP P P + A +P K+R + P+E+++V+ Sbjct: 592 TEAKPESKQEPVKTEMGPPPSPASTCSDASSIASSASMPYKRRRSTPAPKEEEKVNEE-Q 650 Query: 211 WAIATRGVVVKDKVFYNLEPSELQKSGTTCAERLSGT 321 W++ R VV + V L+ G A + GT Sbjct: 651 WSL--REVVFVEDVKNVPVGKVLKVDGAYVAVKFPGT 685 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 304,601,870 Number of extensions: 7070248 Number of successful extensions: 19619 Number of sequences better than 10.0: 42 Number of HSP's gapped: 19516 Number of HSP's successfully gapped: 44 Length of query: 545 Length of database: 100,686,439 Length adjustment: 118 Effective length of query: 427 Effective length of database: 68,319,629 Effective search space: 29172481583 Effective search space used: 29172481583 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
