ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf52i21 |
|---|---|
| Clone Library Name | barley_pub |
>AK111957:Os10g0533100 | Length = 221 Score = 150 bits (378), Expect = 2e-36 Identities = 72/90 (80%), Positives = 81/90 (90%) Frame = +2 Query: 386 LPQVVFDRILRRILFTVGVPMASGVALLNVYDALKRGGGAEVPSWVQLLTILLSFGTSAL 565 LPQ VFDRILRRI+F VGVPMASGV LLN+Y AL+RG G VPSW+ LLTIL++FGTSAL Sbjct: 118 LPQPVFDRILRRIMFMVGVPMASGVGLLNLYGALERGRGVAVPSWLPLLTILVAFGTSAL 177 Query: 566 GIAYGTLSASWDPEKEGSLLGVDEARTNWP 655 GIA+GTLSASWDPEKEGSLLG++EAR NWP Sbjct: 178 GIAFGTLSASWDPEKEGSLLGLEEARANWP 207
>AK099073:Os10g0533100 | Length = 221 Score = 150 bits (378), Expect = 2e-36 Identities = 72/90 (80%), Positives = 81/90 (90%) Frame = +2 Query: 386 LPQVVFDRILRRILFTVGVPMASGVALLNVYDALKRGGGAEVPSWVQLLTILLSFGTSAL 565 LPQ VFDRILRRI+F VGVPMASGV LLN+Y AL+RG G VPSW+ LLTIL++FGTSAL Sbjct: 118 LPQPVFDRILRRIMFMVGVPMASGVGLLNLYGALERGRGVAVPSWLPLLTILVAFGTSAL 177 Query: 566 GIAYGTLSASWDPEKEGSLLGVDEARTNWP 655 GIA+GTLSASWDPEKEGSLLG++EAR NWP Sbjct: 178 GIAFGTLSASWDPEKEGSLLGLEEARANWP 207
>AK062694:Os02g0773500 | Length = 197 Score = 40.0 bits (92), Expect = 0.002 Identities = 23/78 (29%), Positives = 35/78 (44%) Frame = +2 Query: 419 RILFTVGVPMASGVALLNVYDALKRGGGAEVPSWVQLLTILLSFGTSALGIAYGTLSASW 598 R+L +A+ A L V D P+W + F LG YG LS+ W Sbjct: 86 RMLAPPAAAVAAEAAFLRVLDG---AASDAAPAWAGSAGSAVLFAVGLLGFHYGFLSSRW 142 Query: 599 DPEKEGSLLGVDEARTNW 652 + + GSL+G + A ++W Sbjct: 143 NAAERGSLVGWELAASHW 160
>AK067579:Os11g0118400 | Length = 141 Score = 34.3 bits (77), Expect = 0.12 Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 8/75 (10%) Frame = +3 Query: 18 RAWPPCST*RLSIHLAPPQTPIIHGRTAGP--------PRPSSPHMTQRRPSDDELQPGG 173 RAW + +S AP + P HG A P P PS+ + R P+ P Sbjct: 40 RAWRSSRSLAISTPAAPGRAPRRHGHPASPASSPPAPAPAPSAAPASARSPASAPGSPAA 99 Query: 174 YTRPATAAASAHHQP 218 TR AAA+ P Sbjct: 100 ATRSCRAAATRTSSP 114
>Os05g0376700:Os05g0376700 | Length = 1472 Score = 33.5 bits (75), Expect = 0.21 Identities = 17/51 (33%), Positives = 22/51 (43%) Frame = -1 Query: 567 PSADVPKERRMVSSCTHDGTSAPPPRLSASYTLRRATPDAIGTPTVNRIRR 415 P P R +S T +S PP +S + ATP TPT R+ R Sbjct: 858 PPTPTPTHSRATTSTTTSSSSTPPQPVSPRALVPTATPPGTSTPTPARVER 908
>Os08g0248500:Os08g0248500 | Length = 1827 Score = 32.3 bits (72), Expect = 0.47 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = -1 Query: 567 PSADVPKERRMVSSCTHDGTSAPPPRLSASYTLRRATPDAIGTPTVNRIRR 415 P P R +S T +S PP +S ATP TPT R+ R Sbjct: 976 PPTPTPTHPRATTSTTTSSSSTPPQPVSPHAPAPTATPPGTSTPTPARVER 1026
>Os03g0285000:Os03g0285000 | Length = 2326 Score = 32.3 bits (72), Expect = 0.47 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = -1 Query: 567 PSADVPKERRMVSSCTHDGTSAPPPRLSASYTLRRATPDAIGTPTVNRIRR 415 P P R +S T +S PP +S ATP TPT R+ R Sbjct: 1176 PPTPTPTHPRATTSTTTSSSSTPPQPVSPRAPAPTATPPGTSTPTPARVER 1226
>Os02g0494600:Os02g0494600 | Length = 327 Score = 31.6 bits (70), Expect = 0.80 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +3 Query: 78 PIIHGRTAGPPRPSSPHMTQRRPSDDELQPGGYTRPATAAASAHHQP 218 P + G +GPPR P QR P+D P G + A H+P Sbjct: 91 PAVPGPRSGPPRSRRPGCRQR-PADHATAPAGSSTAAVGRLPGFHRP 136
>Os09g0473900:Os09g0473900 | Length = 1685 Score = 31.6 bits (70), Expect = 0.81 Identities = 17/51 (33%), Positives = 21/51 (41%) Frame = -1 Query: 567 PSADVPKERRMVSSCTHDGTSAPPPRLSASYTLRRATPDAIGTPTVNRIRR 415 P P R +S T +S PP +S ATP TPT R+ R Sbjct: 976 PPTPTPTHPRATTSTTTSSSSTPPQPVSPRAPAPIATPPGTSTPTPARVER 1026
>Os06g0149600:Os06g0149600 | Length = 1600 Score = 31.6 bits (70), Expect = 0.81 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = -1 Query: 567 PSADVPKERRMVSSCTHDGTSAPPPRLSASYTLRRATPDAIGTPTVNRIRR 415 P P R +S T +S PP ++ ATP + TPT R+ R Sbjct: 975 PPTPTPTHPRATTSTTTSSSSTPPQPVTPHAPAPTATPPSTSTPTPARVER 1025
>Os03g0131600:Os03g0131600 | Length = 1497 Score = 31.6 bits (70), Expect = 0.81 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = -1 Query: 567 PSADVPKERRMVSSCTHDGTSAPPPRLSASYTLRRATPDAIGTPTVNRIRR 415 P P R +S T +S PP ++ ATP + TPT R+ R Sbjct: 885 PPTPTPTHPRATTSTTTSSSSTPPQPVTPHAPAPTATPPSTSTPTPARVER 935
>Os02g0634400:Os02g0634400 | Length = 183 Score = 31.2 bits (69), Expect = 1.0 Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 2/65 (3%) Frame = +3 Query: 27 PPCST*RLSIH--LAPPQTPIIHGRTAGPPRPSSPHMTQRRPSDDELQPGGYTRPATAAA 200 PP +T R H PP P R+ R S H DEL P RP AAA Sbjct: 80 PPTATSRRRPHPPALPPSPPAPACRSPSLSRRSHRHRLPSSSHCDELPPPSPARPPAAAA 139 Query: 201 SAHHQ 215 H+ Sbjct: 140 GCRHR 144
>AK060566:Os03g0595800 | Length = 109 Score = 30.4 bits (67), Expect = 1.8 Identities = 16/34 (47%), Positives = 18/34 (52%) Frame = -3 Query: 502 AAPALERVVHVEEGHAGRHRDAHREQDPPEDAVE 401 A PA+ RVV V GH G A +E PP D E Sbjct: 29 ARPAVYRVVGVAPGHRGMAASAGQEGGPPRDFSE 62
>AK105287:Os12g0511300 | Length = 179 Score = 29.6 bits (65), Expect = 3.0 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 3/35 (8%) Frame = -2 Query: 122 RGWAWW--PGCASMDDGGLGRGEV-DGEPLRGARR 27 RG WW GC S GG+G GE GE RG R Sbjct: 117 RGPWWWRTAGCGSRRGGGVGPGEARRGEAARGCTR 151
>AK068053:Os01g0764600 | Length = 154 Score = 29.6 bits (65), Expect = 3.0 Identities = 13/32 (40%), Positives = 17/32 (53%) Frame = -3 Query: 142 RRCVMWGEDGRGGPAVRPWMMGVWGGARWMES 47 RR +WG G GPA+RP +W R E+ Sbjct: 102 RRGRLWGWTGADGPAIRPARSWMWRACRRWEA 133
>AK060685:Os02g0102200 | Length = 518 Score = 29.6 bits (65), Expect = 3.0 Identities = 13/38 (34%), Positives = 22/38 (57%) Frame = +2 Query: 518 WVQLLTILLSFGTSALGIAYGTLSASWDPEKEGSLLGV 631 W+ +L ++SF SA+G+A G + + GS +GV Sbjct: 228 WLSILAAVMSFTYSAVGLALGAAQVAQNRTFAGSAMGV 265
>AK103326:Os01g0111900 | Length = 212 Score = 29.3 bits (64), Expect = 4.0 Identities = 18/47 (38%), Positives = 20/47 (42%) Frame = -1 Query: 531 SSCTHDGTSAPPPRLSASYTLRRATPDAIGTPTVNRIRRRMRSNTTC 391 SSC+ PPP S+S T R A A P R R R TC Sbjct: 33 SSCS--SPPRPPPPTSSSATTRSAPRAACPAPAARRARTPARRRPTC 77
>AK072316:Os03g0375300 | Length = 547 Score = 29.3 bits (64), Expect = 4.0 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = -1 Query: 504 APPPRLSASYTLRRATPDAIGTPTVNRIRRRM 409 AP PR +A+ RR P A+G P V RRR+ Sbjct: 464 APLPRPAAAPRARRHVPRAVGVPGVRGRRRRV 495
>Os08g0474100:Os08g0474100 | Length = 160 Score = 28.9 bits (63), Expect = 5.2 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = -3 Query: 118 DGRGGPAVRPWMMGVWGGARWMESRYVEQGGHAR 17 DGR A RP G GG RW E +++ GH + Sbjct: 104 DGRHRRAARPAGSGGGGGVRWKEMLGLKRPGHRK 137
>Os04g0245000:Os04g0245000 | Length = 1541 Score = 28.9 bits (63), Expect = 5.2 Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 3/44 (6%) Frame = +3 Query: 66 PPQTPIIHGRTAGPPRP---SSPHMTQRRPSDDELQPGGYTRPA 188 PP P HG GPP P +P M P PGG PA Sbjct: 1185 PPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPA 1228
>AK108638:Os06g0225400 | Length = 136 Score = 28.9 bits (63), Expect = 5.2 Identities = 19/52 (36%), Positives = 22/52 (42%) Frame = +3 Query: 63 APPQTPIIHGRTAGPPRPSSPHMTQRRPSDDELQPGGYTRPATAAASAHHQP 218 A P +P + + P PSSP R P D GG T AASA P Sbjct: 70 ASPSSPSLLRSSVAVPVPSSPRHANRGPGD-----GGGLLVVTVAASAVRPP 116
>AK071030:Os12g0288400 | Length = 546 Score = 28.9 bits (63), Expect = 5.2 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = +3 Query: 66 PPQTPIIHGRTAGPPRPSSPHMTQRR---PSDDELQPGGYTRPATAAASA 206 PP +P G A SS + + P++D + Y+RPA A ASA Sbjct: 81 PPSSPYSAGHAADEYSSSSSYRRRGASAPPAEDVVVSSSYSRPAAAVASA 130
>AK065891:Os05g0424000 | Length = 496 Score = 28.9 bits (63), Expect = 5.2 Identities = 12/39 (30%), Positives = 22/39 (56%) Frame = +2 Query: 515 SWVQLLTILLSFGTSALGIAYGTLSASWDPEKEGSLLGV 631 SW+ +L ++SF S +G+ G + + +GSL G+ Sbjct: 198 SWLSILAAVMSFTYSTIGLGLGVVQVVANGGVKGSLTGI 236
>AK059325:Os01g0882800 | Length = 488 Score = 28.9 bits (63), Expect = 5.2 Identities = 12/39 (30%), Positives = 23/39 (58%) Frame = +2 Query: 515 SWVQLLTILLSFGTSALGIAYGTLSASWDPEKEGSLLGV 631 SW+ +L ++SF S +G++ G + + +GSL G+ Sbjct: 197 SWLSMLAAVMSFTYSVIGLSLGIVQVVANGGLKGSLTGI 235
>Os11g0199800:Os11g0199800 | Length = 1523 Score = 28.9 bits (63), Expect = 5.2 Identities = 15/51 (29%), Positives = 20/51 (39%) Frame = -1 Query: 567 PSADVPKERRMVSSCTHDGTSAPPPRLSASYTLRRATPDAIGTPTVNRIRR 415 PS P R +S + PP + ATP + TPT R+ R Sbjct: 956 PSTPTPTHPRATASTATSSSPTPPQPATPRAPAPTATPPSTSTPTPARVER 1006
>Os08g0237800:Os08g0237800 | Length = 301 Score = 28.5 bits (62), Expect = 6.8 Identities = 12/35 (34%), Positives = 15/35 (42%) Frame = -3 Query: 112 RGGPAVRPWMMGVWGGARWMESRYVEQGGHARRRW 8 RGGPA W G+ W + QGG + W Sbjct: 190 RGGPAFPTWQKMRAHGSLWNADDWATQGGRVKTDW 224
>Os02g0552600:Os02g0552600 | Length = 856 Score = 28.5 bits (62), Expect = 6.8 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Frame = +3 Query: 12 RRRAWPPCST*RLSIHLAPPQTPIIHGRTAGPPRPSSPHMTQRRPSDDELQPGGYTR-PA 188 RRR PP PP P++ TA PP P+ P T + + D P R P Sbjct: 463 RRRVRPPL----------PPSPPLLSSTTATPP-PTPPVGTPKSEAADRRPPPARRRLPL 511 Query: 189 TAAASAHHQ 215 +AA+ + Sbjct: 512 VSAAAVEEE 520
>AY224467:Os03g0238800 | Length = 563 Score = 28.5 bits (62), Expect = 6.8 Identities = 22/68 (32%), Positives = 26/68 (38%) Frame = +3 Query: 15 RRAWPPCST*RLSIHLAPPQTPIIHGRTAGPPRPSSPHMTQRRPSDDELQPGGYTRPATA 194 R+ P S R + L PP P GPPRP++ P P PA Sbjct: 434 RKQVPSESVSRFTTPLTPPPMPW------GPPRPANMARHSSSPKHFGYAPNSGVLPA-P 486 Query: 195 AASAHHQP 218 A AHH P Sbjct: 487 AIGAHHIP 494
>AK120166:Os02g0658400 | Length = 399 Score = 28.5 bits (62), Expect = 6.8 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 4/34 (11%) Frame = +3 Query: 408 ASSGGSCSRWA----SRWRPAWPSSTCTTRSSAG 497 ASS GSC+ W+ + RPA PS C+ SS G Sbjct: 78 ASSYGSCAAWSAGSLTDHRPASPSPICSPVSSNG 111
>AK109851:Os06g0476900 | Length = 104 Score = 28.5 bits (62), Expect = 6.8 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 4/31 (12%) Frame = +3 Query: 69 PQTPIIHGRT----AGPPRPSSPHMTQRRPS 149 P P +H RT A PPR S PH T PS Sbjct: 54 PPLPRLHRRTTSLAAAPPRDSPPHATASCPS 84
>AK101619:Os06g0342000 | Length = 556 Score = 28.5 bits (62), Expect = 6.8 Identities = 10/22 (45%), Positives = 13/22 (59%) Frame = -2 Query: 131 HVGRGWAWWPGCASMDDGGLGR 66 H R W W+ C + +GGLGR Sbjct: 102 HCDRLWPWYSFCPYLSNGGLGR 123
>AK071766:Os02g0678400 | Length = 203 Score = 28.5 bits (62), Expect = 6.8 Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Frame = +3 Query: 6 IHRRRAWPPCST*RLSIHLAPPQTPIIHGRTAGPPRPSS---PHMTQRRPSDDELQPGGY 176 I RRA PP S R +PP TA PP P S P +R S PGG Sbjct: 22 ISPRRAAPPFSAPRRRAWASPP--------TAPPPPPRSRRRPRSRRRTSSSSTAGPGG- 72 Query: 177 TRPATAAASA 206 A +A+SA Sbjct: 73 -SGACSASSA 81
>AK071365:Os05g0350700 | Length = 1251 Score = 28.5 bits (62), Expect = 6.8 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = +3 Query: 93 RTAGPPRPSSPHMTQRRPSDDELQPGGYTRPATAAASAHHQ 215 +TA P S +T+ S ++ P G R T+AASA H+ Sbjct: 1151 KTANISAPVSSALTRDPQSQAKITPSGNGRDNTSAASARHE 1191
>AK068294:Os03g0837000 | Length = 445 Score = 28.5 bits (62), Expect = 6.8 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 3/46 (6%) Frame = +3 Query: 57 HLA-PPQTPIIHGRTAG--PPRPSSPHMTQRRPSDDELQPGGYTRP 185 HLA PPQ+P +HG P PH R S +QP P Sbjct: 285 HLAIPPQSPALHGLHPSQISAVPVMPHDAHRSSSTSTIQPTSLANP 330
>Os08g0546100:Os08g0546100 | Length = 444 Score = 28.1 bits (61), Expect = 8.9 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = +3 Query: 99 AGPPRPSSPHMTQRRPSDDELQPGGYTRPATAAASA 206 A PP+ PH+ R P + Q + PA A A+A Sbjct: 360 AAPPKARPPHLPPRPPPAQQQQRRQFQPPAPATATA 395
>Os03g0717300:Os03g0717300 | Length = 160 Score = 28.1 bits (61), Expect = 8.9 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +3 Query: 426 CSRWASRWRPAWPSSTCTTRSSA 494 C+ W + WR + PSS T RSS+ Sbjct: 20 CTCWCTWWRSSSPSSASTPRSSS 42
>Os01g0967000:Os01g0967000 | Length = 456 Score = 28.1 bits (61), Expect = 8.9 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Frame = -3 Query: 127 WGEDGRGGPAVRPWM-MGVWGGARWMESRYVEQGGHARR 14 W + GR PA PW+ MG GGAR R G +RR Sbjct: 310 WRQRGRRSPAHPPWLRMGRGGGARCSRRR-----GRSRR 343
>AK072998:Os04g0421700 | Length = 984 Score = 28.1 bits (61), Expect = 8.9 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Frame = +3 Query: 63 APPQTPIIHGR-TAGPPRPSSPHMTQRRPSDDELQPGGYTRPATAAASA 206 +PP P G A PP+P+ P + P G PATAAA+A Sbjct: 24 SPPPHPAASGNEAAAPPKPNPPITPAPARNASAAPPSG--SPATAAAAA 70
>AK071961:Os01g0329000 | Length = 565 Score = 28.1 bits (61), Expect = 8.9 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +3 Query: 78 PIIHGRTAGPPRPSSPHMTQRRPSDDELQP 167 P++H + PP+P++ R PSDDEL P Sbjct: 22 PLVH---SPPPQPAAADNIVRWPSDDELLP 48
>Os02g0491900:Os02g0491900 | Length = 1677 Score = 28.1 bits (61), Expect = 8.9 Identities = 15/51 (29%), Positives = 21/51 (41%) Frame = -1 Query: 567 PSADVPKERRMVSSCTHDGTSAPPPRLSASYTLRRATPDAIGTPTVNRIRR 415 P P R +S T +S P ++ ATP + TPT R+ R Sbjct: 1052 PPTPTPTHPRATTSTTTSSSSIQPQPVTPHAPAPTATPPSTSTPTPARVER 1102
>AK101751:Os09g0464100 | Length = 166 Score = 28.1 bits (61), Expect = 8.9 Identities = 19/56 (33%), Positives = 23/56 (41%) Frame = -1 Query: 564 SADVPKERRMVSSCTHDGTSAPPPRLSASYTLRRATPDAIGTPTVNRIRRRMRSNT 397 +A VP R + +PPP L + LRR P A P V R R R T Sbjct: 96 AAAVPPGARTLPPPDTAQPHSPPPPLRPARRLRRCAPPAATLPHVARSRHHCREWT 151 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 20,384,047 Number of extensions: 459574 Number of successful extensions: 2373 Number of sequences better than 10.0: 41 Number of HSP's gapped: 2363 Number of HSP's successfully gapped: 41 Length of query: 303 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 203 Effective length of database: 11,395,755 Effective search space: 2313338265 Effective search space used: 2313338265 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
