ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf52i18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK070398:Os05g0230600 | 1611 | 0.0 | 2 | AK065765:Os05g0230600 | 1230 | 0.0 | 3 | Os01g0633900:Os01g0633900 | 33 | 1.0 | 4 | AK101247:Os09g0441900 | 32 | 2.3 | 5 | AK066544:Os07g0102100 | 32 | 2.9 | 6 | AK111890:Os06g0575400 | 31 | 6.6 | 7 | AK106611:Os09g0563700 | 31 | 6.6 | 8 | AK103005:Os09g0563700 | 31 | 6.6 | 9 | Os02g0109100:Os02g0109100 | 30 | 8.6 | 10 | AK119734: | 30 | 8.6 | 11 | AK110228: | 30 | 8.6 | 12 | AK102795:Os09g0516200 | 30 | 8.6 | 13 | AF005492:Os09g0516200 | 30 | 8.6 |
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>AK070398:Os05g0230600 | Length = 989 Score = 1611 bits (4172), Expect = 0.0 Identities = 801/959 (83%), Positives = 882/959 (91%) Frame = +2 Query: 218 DQVGLADWHQKYIGKVKQAVYHTQKSGRRRVVVLTEENVIASLDLRSGDIFWRHVIEKNN 397 DQVGLADWHQKYIGKVKQAVYH+QKSGRRRVVVLTEENVIASLDLRSGDIFWRHVIEKN+ Sbjct: 32 DQVGLADWHQKYIGKVKQAVYHSQKSGRRRVVVLTEENVIASLDLRSGDIFWRHVIEKND 91 Query: 398 PIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQMVWETNIQTSSASKSLLHVLSNSKVVQD 577 P+D+LSLS GKYVVTLSSGGSILRAWNLPDGQM+WETN+Q S +SK LLHVLSN+KV +D Sbjct: 92 PVDELSLSLGKYVVTLSSGGSILRAWNLPDGQMIWETNLQVSKSSKPLLHVLSNNKVAKD 151 Query: 578 NLVLVLAGQWIYAISSIDGLISWGKEFTLDGLEIKQVVQSPENDIVYVVGIAGSSKLAVY 757 NLV VLAG+WIYA+SSIDG+ISWGKEF+LDGL++KQ++QSPENDIVY VG+AGSSKL +Y Sbjct: 152 NLVFVLAGRWIYAVSSIDGVISWGKEFSLDGLDLKQIIQSPENDIVYAVGLAGSSKLNLY 211 Query: 758 QLNAKTGEIVKDAQESLPDGLCGEMLLGSSNVLVALDETRSALFIVEFKGESISYNKVQI 937 QLNAKTGE VK QES P LCGE +LGS NVLVALDETRS LF++E KGESISYNKV I Sbjct: 212 QLNAKTGETVKHIQESFPIALCGETILGSHNVLVALDETRSDLFLIELKGESISYNKVHI 271 Query: 938 SEFVQDFSGMVKLLPLMSNGIIALQSSSTVSLLKLKGMNGLEVIHSFDRPASVSDALTIT 1117 S+ VQD SG VKLLPLMSNG+IALQ+SSTVSLLKLKG++GLEVI SF++PA+VSDALTIT Sbjct: 272 SDLVQDLSGTVKLLPLMSNGVIALQASSTVSLLKLKGIDGLEVIQSFEQPAAVSDALTIT 331 Query: 1118 EKDEAFAIVQHVGSQIEFIVKVTSDLTNEIIREKVDIDQHRGSVEKVFLNNYVRTDKSHG 1297 EKDEAFA+VQH GS+IEF+VK TSD+T E+IREK++IDQHRG+++KVFLNNY+RTDKSHG Sbjct: 332 EKDEAFAVVQHTGSEIEFVVKFTSDVTGEVIREKINIDQHRGNIQKVFLNNYIRTDKSHG 391 Query: 1298 FRALVVMEDHSLLLIQQGAVVWSREDGLASIVDVMASELPVEKDGVSVADVEHNLFEWLK 1477 FRALVVMEDHSLLL+QQG VVWSREDGLASIVDV SELP+EKDGVSVA+VEHNLFEWLK Sbjct: 392 FRALVVMEDHSLLLVQQGEVVWSREDGLASIVDVTTSELPIEKDGVSVANVEHNLFEWLK 451 Query: 1478 GHVLKLKGTLMLASVDELAAIQALRVRSSEKNKMTRDHNGFRKLLIVLTKAGKVIALHTG 1657 GH+LKLKGTLMLA+ DELAAIQA+R++SSEKNKMTRDHNGFRKLLIVLTKAGKVIALHTG Sbjct: 452 GHMLKLKGTLMLANADELAAIQAMRLKSSEKNKMTRDHNGFRKLLIVLTKAGKVIALHTG 511 Query: 1658 DGRIIWSNLLPSLRASKSGEMPSALRIYQWQVPHHRVMRENPSILVVGRSGASSVAPGVL 1837 DGRIIWSNLL SLR+SKSGEMPSALRI QWQVPHHRVM ENPSIL++GRSGA S APGVL Sbjct: 512 DGRIIWSNLLQSLRSSKSGEMPSALRICQWQVPHHRVMHENPSILIIGRSGADSAAPGVL 571 Query: 1838 CILDSYSGEELNSQRFDHSVAQIIPLILKDSSEQRLHLIVDSNSNAHLYPRSPDALNSFM 2017 +LDSYSGEELNS + DHSV QIIPL +KDSSE RL LIVDS+S AHLYPRSPDA+N F+ Sbjct: 572 SVLDSYSGEELNSLKLDHSVVQIIPLTVKDSSEHRLQLIVDSHSRAHLYPRSPDAMNVFL 631 Query: 2018 TEMSNQYFYSVDIQKNAIRGYSLQKSCDFDSGDTYCFSTRLLWSIIFPSDAERISVSETR 2197 EM N Y Y+VDI+ N IRG+SLQKSCD +S D YCFST+ LWSI+FPSD ERI++SETR Sbjct: 632 HEMPNTYLYTVDIETNVIRGHSLQKSCD-NSADEYCFSTKELWSIVFPSDTERIAISETR 690 Query: 2198 KMNEVVHTQAKIIADQDVMYKYLSKSLIFVATVSPKAAGEIGSAAPEEASLMAYLIDAVS 2377 KMNEVVH QAKIIADQDVMYKYLSK+L+FVATVSPKA+GEIGSAAPEEA L+AYLIDAV+ Sbjct: 691 KMNEVVHAQAKIIADQDVMYKYLSKNLVFVATVSPKASGEIGSAAPEEAWLVAYLIDAVT 750 Query: 2378 GRILHRMTHHGAQGPVHSVVSENWVVYHYFNLRAHRFEIAVIEIYDQSRADNKDVLKLIL 2557 GRILHR+THHGAQGPVH+VVSENWVVYHYFNLRAHRFE+AVIEIYDQSRADNKDV+KLIL Sbjct: 751 GRILHRVTHHGAQGPVHAVVSENWVVYHYFNLRAHRFEMAVIEIYDQSRADNKDVMKLIL 810 Query: 2558 GKHNLSAPMTSYSRPEVMVKSQSYFFTHSVKAMAVTQTAKGITSKQLLIGTIGDQVLALD 2737 GKHNLSAP TSY+RPEVMVKSQSYFFT SVKA+A TQTAKGITSKQLLIGTIGDQVLALD Sbjct: 811 GKHNLSAPTTSYTRPEVMVKSQSYFFTFSVKAIAATQTAKGITSKQLLIGTIGDQVLALD 870 Query: 2738 KRFLDPRRSVNPTQQEKEEGIIPLTDYLPIIPQSYVTHSLQVEALRGIVSIPAKLESTTL 2917 KRF+DPRRSVNPTQQEKEEGIIPLTD LPIIP SY+THSLQVEALRGIVSIP+KLESTTL Sbjct: 871 KRFVDPRRSVNPTQQEKEEGIIPLTDALPIIPTSYLTHSLQVEALRGIVSIPSKLESTTL 930 Query: 2918 VFTYGVDLFYTRLAPSRTYDSLTDEFSYXXXXXXXXXXXXXXFVTWIWSEKKELRDKWR 3094 VFTYGVDLFYT+LAPSRTYDSLTDEFSY VTWIWSEKKELRDKWR Sbjct: 931 VFTYGVDLFYTQLAPSRTYDSLTDEFSYALLLITIAALVAAIVVTWIWSEKKELRDKWR 989
>AK065765:Os05g0230600 | Length = 734 Score = 1230 bits (3183), Expect = 0.0 Identities = 614/735 (83%), Positives = 675/735 (91%) Frame = +2 Query: 890 IVEFKGESISYNKVQISEFVQDFSGMVKLLPLMSNGIIALQSSSTVSLLKLKGMNGLEVI 1069 ++E KGESISYNKV IS+ VQD SG VKLLPLMSNG+IALQ+SSTVSLLKLKG++GLEVI Sbjct: 1 LIELKGESISYNKVHISDLVQDLSGTVKLLPLMSNGVIALQASSTVSLLKLKGIDGLEVI 60 Query: 1070 HSFDRPASVSDALTITEKDEAFAIVQHVGSQIEFIVKVTSDLTNEIIREKVDIDQHRGSV 1249 SF++PA+VSDALTITEKDEAFA+VQH GS+IEF+VK TSD+T E+IREK++IDQHRG++ Sbjct: 61 QSFEQPAAVSDALTITEKDEAFAVVQHTGSEIEFVVKFTSDVTGEVIREKINIDQHRGNI 120 Query: 1250 EKVFLNNYVRTDKSHGFRALVVMEDHSLLLIQQGAVVWSREDGLASIVDVMASELPVEKD 1429 +KVFLNNY+RTDKSHGFRALVVMEDHSLLL+QQG VVWSREDGLASIVDV SELP+EKD Sbjct: 121 QKVFLNNYIRTDKSHGFRALVVMEDHSLLLVQQGEVVWSREDGLASIVDVTTSELPIEKD 180 Query: 1430 GVSVADVEHNLFEWLKGHVLKLKGTLMLASVDELAAIQALRVRSSEKNKMTRDHNGFRKL 1609 GVSVA+VEHNLFEWLKGH+LKLKGTLMLA+ DELAAIQA+R++SSEKNKMTRDHNGFRKL Sbjct: 181 GVSVANVEHNLFEWLKGHMLKLKGTLMLANADELAAIQAMRLKSSEKNKMTRDHNGFRKL 240 Query: 1610 LIVLTKAGKVIALHTGDGRIIWSNLLPSLRASKSGEMPSALRIYQWQVPHHRVMRENPSI 1789 LIVLTKAGKVIALHTGDGRIIWSNLL SLR+SKSGEMPSALRI QWQVPHHRVM ENPSI Sbjct: 241 LIVLTKAGKVIALHTGDGRIIWSNLLQSLRSSKSGEMPSALRICQWQVPHHRVMHENPSI 300 Query: 1790 LVVGRSGASSVAPGVLCILDSYSGEELNSQRFDHSVAQIIPLILKDSSEQRLHLIVDSNS 1969 L++GRSGA S APGVL +LDSYSGEELNS + DHSV QIIPL +KDSSE RL LIVDS+S Sbjct: 301 LIIGRSGADSAAPGVLSVLDSYSGEELNSLKLDHSVVQIIPLTVKDSSEHRLQLIVDSHS 360 Query: 1970 NAHLYPRSPDALNSFMTEMSNQYFYSVDIQKNAIRGYSLQKSCDFDSGDTYCFSTRLLWS 2149 AHLYPRSPDA+N F+ EM N Y Y+VDI+ N IRG+SLQKSCD +S D YCFST+ LWS Sbjct: 361 RAHLYPRSPDAMNVFLHEMPNTYLYTVDIETNVIRGHSLQKSCD-NSADEYCFSTKELWS 419 Query: 2150 IIFPSDAERISVSETRKMNEVVHTQAKIIADQDVMYKYLSKSLIFVATVSPKAAGEIGSA 2329 I+FPSD ERI++SETRKMNEVVH QAKIIADQDVMYKYLSK+L+FVATVSPKA+GEIGSA Sbjct: 420 IVFPSDTERIAISETRKMNEVVHAQAKIIADQDVMYKYLSKNLVFVATVSPKASGEIGSA 479 Query: 2330 APEEASLMAYLIDAVSGRILHRMTHHGAQGPVHSVVSENWVVYHYFNLRAHRFEIAVIEI 2509 APEEA L+AYLIDAV+GRILHR+THHGAQGPVH+VVSENWVVYHYFNLRAHRFE+AVIEI Sbjct: 480 APEEAWLVAYLIDAVTGRILHRVTHHGAQGPVHAVVSENWVVYHYFNLRAHRFEMAVIEI 539 Query: 2510 YDQSRADNKDVLKLILGKHNLSAPMTSYSRPEVMVKSQSYFFTHSVKAMAVTQTAKGITS 2689 YDQSRADNKDV+KLILGKHNLSAP TSY+RPEVMVKSQSYFFT SVKA+A TQTAKGITS Sbjct: 540 YDQSRADNKDVMKLILGKHNLSAPTTSYTRPEVMVKSQSYFFTFSVKAIAATQTAKGITS 599 Query: 2690 KQLLIGTIGDQVLALDKRFLDPRRSVNPTQQEKEEGIIPLTDYLPIIPQSYVTHSLQVEA 2869 KQLLIGTIGDQVLALDKRF+DPRRSVNPTQQEKEEGIIPLTD LPIIP SY+THSLQVEA Sbjct: 600 KQLLIGTIGDQVLALDKRFVDPRRSVNPTQQEKEEGIIPLTDALPIIPTSYLTHSLQVEA 659 Query: 2870 LRGIVSIPAKLESTTLVFTYGVDLFYTRLAPSRTYDSLTDEFSYXXXXXXXXXXXXXXFV 3049 LRGIVSIP+KLESTTLVFTYGVDLFYT+LAPSRTYDSLTDEFSY V Sbjct: 660 LRGIVSIPSKLESTTLVFTYGVDLFYTQLAPSRTYDSLTDEFSYALLLITIAALVAAIVV 719 Query: 3050 TWIWSEKKELRDKWR 3094 TWIWSEKKELRDKWR Sbjct: 720 TWIWSEKKELRDKWR 734
>Os01g0633900:Os01g0633900 | Length = 119 Score = 33.5 bits (75), Expect = 1.0 Identities = 14/22 (63%), Positives = 19/22 (86%) Frame = +2 Query: 2717 DQVLALDKRFLDPRRSVNPTQQ 2782 ++VLALDK F+DPR +NPTQ+ Sbjct: 73 EKVLALDKSFVDPRCLLNPTQE 94
>AK101247:Os09g0441900 | Length = 444 Score = 32.3 bits (72), Expect = 2.3 Identities = 26/79 (32%), Positives = 32/79 (40%) Frame = +1 Query: 1309 GCNGRSFPPVNSTRCGCLEQRGWTCFNC*CNGF*IAC*EGWCLSCGCGTQSL*VA*GTCA 1488 GCNG P CGC G C +C CNG C C GCG+ S CA Sbjct: 260 GCNGCGCP-----SCGC---NGCGCPSCGCNG----CGLPSCGCNGCGSCS-------CA 300 Query: 1489 ETQRNSNAC*C**TCCNPS 1545 + + + +C C PS Sbjct: 301 QCKPDCGSCSTNCCSCKPS 319
>AK066544:Os07g0102100 | Length = 808 Score = 32.0 bits (71), Expect = 2.9 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Frame = -3 Query: 1536 AASSSTLASIRVPLSFSTCPLSHSKRLC-STSATETPSFSTGNSEAITSTIEASPSS 1369 +AS+S+ A+ P S ST P S + +TS+ +PS ST +S + +S+ SPS+ Sbjct: 18 SASASSTATSAPPHSTSTPPPSTAASATPTTSSASSPSSSTASSSSPSSSTSTSPSA 74
>AK111890:Os06g0575400 | Length = 802 Score = 30.8 bits (68), Expect = 6.6 Identities = 17/64 (26%), Positives = 34/64 (53%) Frame = +2 Query: 380 VIEKNNPIDQLSLSAGKYVVTLSSGGSILRAWNLPDGQMVWETNIQTSSASKSLLHVLSN 559 V+ NP+ + K+ + S GG +L+ +N GQ+VW N+ +S+A + +L+ Sbjct: 75 VVWSANPLHPVYTWESKFELK-SDGGMLLKDYN---GQVVWTNNVSSSNAEQVQAKLLNT 130 Query: 560 SKVV 571 ++ Sbjct: 131 GNLI 134
>AK106611:Os09g0563700 | Length = 710 Score = 30.8 bits (68), Expect = 6.6 Identities = 20/70 (28%), Positives = 36/70 (51%) Frame = +2 Query: 1763 RVMRENPSILVVGRSGASSVAPGVLCILDSYSGEELNSQRFDHSVAQIIPLILKDSSEQR 1942 R RE+ S+ G S+ A LC + G + Q F ++ Q +PL L D +E++ Sbjct: 8 RSFREDASM--AGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERK 65 Query: 1943 LHLIVDSNSN 1972 L+ + ++ S+ Sbjct: 66 LYGVFEATSD 75
>AK103005:Os09g0563700 | Length = 710 Score = 30.8 bits (68), Expect = 6.6 Identities = 20/70 (28%), Positives = 36/70 (51%) Frame = +2 Query: 1763 RVMRENPSILVVGRSGASSVAPGVLCILDSYSGEELNSQRFDHSVAQIIPLILKDSSEQR 1942 R RE+ S+ G S+ A LC + G + Q F ++ Q +PL L D +E++ Sbjct: 8 RSFREDASM--AGAIFMSNTATRELCFRSNIFGLPIEYQPFVRNIRQGMPLFLFDHTERK 65 Query: 1943 LHLIVDSNSN 1972 L+ + ++ S+ Sbjct: 66 LYGVFEATSD 75
>Os02g0109100:Os02g0109100 | Length = 791 Score = 30.4 bits (67), Expect = 8.6 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -2 Query: 1831 ARSNRAGSRSSHNKYGRVLTHHAVMGYLPLVYPQ 1730 A S AGS + G++LTHHAV G+ L P+ Sbjct: 668 ATSTAAGSHCRVRRTGQLLTHHAVSGHGGLARPR 701
>AK119734: | Length = 1087 Score = 30.4 bits (67), Expect = 8.6 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = -1 Query: 1472 ATQRDCVP-HPQLRHHPSQQAIQKPLHQQLKQVHPLCSRQPHLVE 1341 +T +D V Q + P QQ K HQQLKQ H L +Q L++ Sbjct: 728 STSKDAVTGEQQQQQQPHQQQQIKQRHQQLKQRHKLGRQQKRLLD 772
>AK110228: | Length = 1551 Score = 30.4 bits (67), Expect = 8.6 Identities = 20/63 (31%), Positives = 31/63 (49%) Frame = -3 Query: 1536 AASSSTLASIRVPLSFSTCPLSHSKRLCSTSATETPSFSTGNSEAITSTIEASPSSLLQT 1357 AAS+S+ AS + + + ++SA PSF+ G S A +S S S+ T Sbjct: 864 AASTSSSASAASSSAAPSFGFGAAPSSAASSAAAAPSFAFGASTAASSAAAESSSTAAST 923 Query: 1356 TAP 1348 +AP Sbjct: 924 SAP 926
>AK102795:Os09g0516200 | Length = 380 Score = 30.4 bits (67), Expect = 8.6 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%) Frame = -1 Query: 1541 GLQQVHQH*QALEFL*VSAHVP*ATQRDCVPHPQLRHHPS--QQAIQKPLHQQLKQVHPL 1368 G QQ+ Q+ QA++ + ++AH QL+ HP QQ + P HQQ + +HPL Sbjct: 298 GNQQMFQNNQAMQSM-LAAH----------QLQQLQLHPQAQQQQVLHPQHQQQQPLHPL 346 Query: 1367 CSRQ 1356 ++Q Sbjct: 347 QAQQ 350
>AF005492:Os09g0516200 | Length = 368 Score = 30.4 bits (67), Expect = 8.6 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%) Frame = -1 Query: 1541 GLQQVHQH*QALEFL*VSAHVP*ATQRDCVPHPQLRHHPS--QQAIQKPLHQQLKQVHPL 1368 G QQ+ Q+ QA++ + ++AH QL+ HP QQ + P HQQ + +HPL Sbjct: 286 GNQQMFQNNQAMQSM-LAAH----------QLQQLQLHPQAQQQQVLHPQHQQQQPLHPL 334 Query: 1367 CSRQ 1356 ++Q Sbjct: 335 QAQQ 338 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 92,239,581 Number of extensions: 2060871 Number of successful extensions: 5474 Number of sequences better than 10.0: 13 Number of HSP's gapped: 5464 Number of HSP's successfully gapped: 13 Length of query: 1119 Length of database: 15,399,855 Length adjustment: 111 Effective length of query: 1008 Effective length of database: 10,955,304 Effective search space: 11042946432 Effective search space used: 11042946432 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
