>Q9D8V0:HM13_MOUSE Minor histocompatibility antigen H13 - Mus musculus (Mouse)|
          Length = 378
 Score = 40.8 bits (94), Expect = 0.002
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = +2

Query: 2   MNWFQAAQPALLYIVPGVTGFVAVHSLWNGEVKPLLEFTETQP 130
           M+ F+ AQPALLY+VP   GF  + +L  GEV  +  + E+ P
Sbjct: 309 MHIFKHAQPALLYLVPACIGFPVLVALAKGEVAEMFSYEESNP 351

>Q8TCT9:HM13_HUMAN Minor histocompatibility antigen H13 - Homo sapiens (Human)|
          Length = 377

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = +2

Query: 2   MNWFQAAQPALLYIVPGVTGFVAVHSLWNGEVKPLLEFTETQP 130
           M+ F+ AQPALLY+VP   GF  + +L  GEV  +  + E+ P
Sbjct: 309 MHIFKHAQPALLYLVPACIGFPVLVALAKGEVTEMFSYEESNP 351

>P34248:YKK0_YEAST Uncharacterized membrane protein YKL100C - Saccharomyces cerevisiae|
           (Baker's yeast)
          Length = 587

 Score = 32.0 bits (71), Expect = 0.72
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 11  FQAAQPALLYIVPGVTGFVAVHSLWNGEVKPLLEF 115
           F  AQPALLYIVP +     + + WN + K    F
Sbjct: 472 FNTAQPALLYIVPSLLISTILVACWNKDFKQFWNF 506

>P49049:IMP2_CAEEL Intramembrane protease 2 - Caenorhabditis elegans|
          Length = 468

 Score = 31.6 bits (70), Expect = 0.94
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +2

Query: 2   MNWFQAAQPALLYIVPGVTGFVAVHSLWNGEVKPLLEFTETQ 127
           M+ F+AAQPALLY+VP       + ++  GE+  L  + E++
Sbjct: 409 MHHFKAAQPALLYLVPCCLFVPLLLAVIRGELSALWNYDESR 450

>Q55434:PHY2_SYNY3 Phytochrome-like protein cph2 - Synechocystis sp. (strain PCC 6803)|
          Length = 1276

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 20  AQPALLYIVPGVTGFVAVHSLWN 88
           A  A+LYI P +TG VA H  WN
Sbjct: 235 ADGAVLYIAPDLTGSVAQHYQWN 257

>P50028:GYRB_MYCCT DNA gyrase subunit B - Mycoplasma capricolum subsp. capricolum|
           (strain California kid / ATCC 27343 / NCTC 10154)
          Length = 643

 Score = 28.9 bits (63), Expect = 6.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 239 GRGEPNQSRISNRLYDPENRKMIELFVSKG 328
           G GE N  ++     DP+NRK+I++ +S G
Sbjct: 572 GLGEMNADQLWQTTMDPKNRKIIQVTISDG 601


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 59,080,818
Number of extensions: 993774
Number of successful extensions: 2045
Number of sequences better than 10.0: 6
Number of HSP's gapped: 2045
Number of HSP's successfully gapped: 6
Length of query: 139
Length of database: 100,686,439
Length adjustment: 101
Effective length of query: 38
Effective length of database: 72,982,644
Effective search space: 2773340472
Effective search space used: 2773340472
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)