ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf49o09 |
|---|---|
| Clone Library Name | barley_pub |
>Q01085:TIAR_HUMAN Nucleolysin TIAR - Homo sapiens (Human)| Length = 375 Score = 221 bits (564), Expect = 6e-57 Identities = 120/290 (41%), Positives = 175/290 (60%), Gaps = 3/290 (1%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQRSAAL 620 D R++YVGN+ +VTE L++++F GP + CK+I + S+ + FV++Y+ R AA Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63 Query: 621 AIMTLHGRHIYGQAIKVNWASA-STQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSC 797 A+ ++GR I G+ +KVNWA+ S+Q++DTS HFH+FVGDLS E+ + + F+ + Sbjct: 64 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI 123 Query: 798 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQE 977 SDARV+ D TG+S+GYGFVSF N+ +AE AI M G+WLG RQIR NWAT+ K Sbjct: 124 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKST 183 Query: 978 TDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYN 1157 +N N +D ++ +P+N TVY G + + D+L R ++ Sbjct: 184 QEN------------NTKQLRFEDVVNQSSPKN----CTVYCGGIASGLT-DQLMRQTFS 226 Query: 1158 LGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 G I E+RV EKG+ F+R+STH AA AI NG + G +KC WG Sbjct: 227 -PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 275 Score = 65.9 bits (159), Expect = 6e-10 Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 23/193 (11%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK----EKSSFGFVDYYDQRSA 614 D S V+VG++ P +T + F G + ++++ + +GFV +Y++ A Sbjct: 92 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 151 Query: 615 ALAIMTLHGRHIYGQAIKVNWASA------STQREDTSG-------------HFHIFVGD 737 AI+ + G+ + G+ I+ NWA+ STQ +T + ++ G Sbjct: 152 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 211 Query: 738 LSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWL 917 ++S + D + FS + + RV + +GY FV F + A AI + G + Sbjct: 212 IASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTI 265 Query: 918 GSRQIRCNWATKT 956 ++C W ++ Sbjct: 266 EGHVVKCYWGKES 278
>P70318:TIAR_MOUSE Nucleolysin TIAR - Mus musculus (Mouse)| Length = 392 Score = 214 bits (545), Expect = 1e-54 Identities = 122/307 (39%), Positives = 176/307 (57%), Gaps = 20/307 (6%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLI------RKEKSSFGF------- 587 D R++YVGN+ +VTE L++++F GP + CK+I R+ SS GF Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTS 63 Query: 588 ------VDYYDQRSAALAIMTLHGRHIYGQAIKVNWASA-STQREDTSGHFHIFVGDLSS 746 V++Y+ R AA A+ ++GR I G+ +KVNWA+ S+Q++DTS HFH+FVGDLS Sbjct: 64 NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSP 123 Query: 747 EVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSR 926 E+ + + F+ + SDARV+ D TG+S+GYGFVSF N+ +AE AI M G+WLG R Sbjct: 124 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 183 Query: 927 QIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVG 1106 QIR NWAT+ K + +N +D ++ +P+N TVY G Sbjct: 184 QIRTNWATRKPPAPKSTQE------------TNTKQLRFEDVVNQSSPKN----CTVYCG 227 Query: 1107 NLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGK 1286 + + D+L R ++ G I E+RV EKG+ F+R+STH AA AI NG + G Sbjct: 228 GIASGLT-DQLMRQTFS-PFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGH 285 Query: 1287 PIKCSWG 1307 +KC WG Sbjct: 286 VVKCYWG 292 Score = 65.5 bits (158), Expect = 8e-10 Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 23/193 (11%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK----EKSSFGFVDYYDQRSA 614 D S V+VG++ P +T + F G + ++++ + +GFV +Y++ A Sbjct: 109 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 168 Query: 615 ALAIMTLHGRHIYGQAIKVNWASA------STQREDTSG-------------HFHIFVGD 737 AI+ + G+ + G+ I+ NWA+ STQ +T + ++ G Sbjct: 169 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGG 228 Query: 738 LSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWL 917 ++S + D + FS + + RV + +GY FV F + A AI + G + Sbjct: 229 IASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTI 282 Query: 918 GSRQIRCNWATKT 956 ++C W ++ Sbjct: 283 EGHVVKCYWGKES 295
>P52912:TIA1_MOUSE Nucleolysin TIA-1 - Mus musculus (Mouse)| Length = 386 Score = 201 bits (512), Expect = 7e-51 Identities = 113/296 (38%), Positives = 169/296 (57%), Gaps = 14/296 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQRSAALAIMTL 635 +++YVGN+ +VTE L++++F GP + CK+I + + FV++++ R AA A+ + Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66 Query: 636 HGRHIYGQAIKVNWASA-STQREDTSG-----------HFHIFVGDLSSEVNDATLYACF 779 +GR I G+ +KVNWA+ S+Q++DTS HFH+FVGDLS E+ + A F Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126 Query: 780 STYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTN 959 + + SDARV+ D TG+S+GYGFVSF N+ +AE AI +M G+WLG RQIR NWAT+ Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186 Query: 960 AEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDEL 1139 K + SN + + S+ +P N TVY G + + + Sbjct: 187 PAPKSTYE------------SNTKQLSYDEVVSQSSPNN----CTVYCGGVTSGLTEQLM 230 Query: 1140 HRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 + F G I E+RV +KG+ F+R+S+H AA AI NG + G +KC WG Sbjct: 231 RQTFSPF--GQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWG 284 Score = 62.4 bits (150), Expect = 6e-09 Identities = 41/186 (22%), Positives = 82/186 (44%), Gaps = 23/186 (12%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK----EKSSFGFVDYYDQRSAALAIMTL 635 V+VG++ P +T + F G + ++++ + +GFV ++++ A AI + Sbjct: 108 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 636 HGRHIYGQAIKVNWASA------STQREDTS-------------GHFHIFVGDLSSEVND 758 G+ + G+ I+ NWA+ ST +T + ++ G ++S + + Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTE 227 Query: 759 ATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRC 938 + FS + + RV D +GY FV F + + A AI + G + ++C Sbjct: 228 QLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKC 281 Query: 939 NWATKT 956 W +T Sbjct: 282 YWGKET 287
>P31483:TIA1_HUMAN Nucleolysin TIA-1 isoform p40 - Homo sapiens (Human)| Length = 386 Score = 198 bits (503), Expect = 7e-50 Identities = 110/296 (37%), Positives = 169/296 (57%), Gaps = 14/296 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQRSAALAIMTL 635 +++YVGN+ +VTE L++++F GP + CK+I + + FV++++ R AA A+ + Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66 Query: 636 HGRHIYGQAIKVNWASA-STQREDTSG-----------HFHIFVGDLSSEVNDATLYACF 779 +GR I G+ +KVNWA+ S+Q++DTS HFH+FVGDLS ++ + A F Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQNHFHVFVGDLSPQITTEDIKAAF 126 Query: 780 STYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTN 959 + + SDARV+ D TG+S+GYGFVSF N+ +AE AI +M G+WLG RQIR NWAT+ Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186 Query: 960 AEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDEL 1139 K + SN + + ++ +P N TVY G + + + Sbjct: 187 PAPKSTYE------------SNTKQLSYDEVVNQSSPSN----CTVYCGGVTSGLTEQLM 230 Query: 1140 HRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 + F G I E+RV +KG+ F+R+++H AA AI NG + G +KC WG Sbjct: 231 RQTFSPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWG 284 Score = 62.8 bits (151), Expect = 5e-09 Identities = 41/186 (22%), Positives = 82/186 (44%), Gaps = 23/186 (12%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK----EKSSFGFVDYYDQRSAALAIMTL 635 V+VG++ P +T + F G + ++++ + +GFV ++++ A AI + Sbjct: 108 VFVGDLSPQITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 167 Query: 636 HGRHIYGQAIKVNWASA------STQREDTS-------------GHFHIFVGDLSSEVND 758 G+ + G+ I+ NWA+ ST +T + ++ G ++S + + Sbjct: 168 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTE 227 Query: 759 ATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRC 938 + FS + + RV D +GY FV F + + A AI + G + ++C Sbjct: 228 QLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 281 Query: 939 NWATKT 956 W +T Sbjct: 282 YWGKET 287
>P32588:PUB1_YEAST Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 -| Saccharomyces cerevisiae (Baker's yeast) Length = 453 Score = 163 bits (412), Expect = 3e-39 Identities = 104/340 (30%), Positives = 162/340 (47%), Gaps = 58/340 (17%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLI---RKEKSSFGFVDYYDQRSAALAIMT 632 R +YVGN+ +TE++L + FQ GP+ K++ + ++ FV+Y+ A +A+ T Sbjct: 75 RVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQT 134 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 L+G+ I +K+NWA S Q+ + F++FVGDL+ V+D TL F +PS V Sbjct: 135 LNGKQIENNIVKINWAFQS-QQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHV 193 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK------TNAEEK- 971 MWD +TG SRGYGFVSF +Q +A+ A+ M G+ L R +R NWA K N +++ Sbjct: 194 MWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAKRDNNNNNNYQQRR 253 Query: 972 ----------QETDNHNAVVLTNGGSSNAAMEANQDTG----------------SKENPE 1073 ++ +N+N + G + N M N G S+ P+ Sbjct: 254 NYGNNNRGGFRQYNNNNNNNMNMGMNMNMNMNMNNSRGMPPSSMGMPIGAMPLPSQGQPQ 313 Query: 1074 NN----------------------PDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVR 1187 + P TT Y+GN+ H +L F N G I + + Sbjct: 314 QSQTIGLPPQVNPQAVDHIIRSAPPRVTTAYIGNIPHFATEADLIPLFQNFGF--ILDFK 371 Query: 1188 VQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 EKG FI+Y TH +AA+ I +G+ ++ WG Sbjct: 372 HYPEKGCCFIKYDTHEQAAVCIVALANFPFQGRNLRTGWG 411 Score = 43.1 bits (100), Expect = 0.004 Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 5/125 (4%) Frame = +3 Query: 945 ATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEV 1124 A + N+E+ ++ N + + AN TG +E + +YVGNL + Sbjct: 41 AVEGNSEQAEDNQGEN---------DPSVVPANAITGGRETSDR-----VLYVGNLDKAI 86 Query: 1125 NRDELHRHFYNLGVGAIEEVRVQQEK-----GFGFIRYSTHGEAALAIQMANGLVVRGKP 1289 D L + ++ +G G I +++ +K + F+ Y +A +A+Q NG + Sbjct: 87 TEDIL-KQYFQVG-GPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNI 144 Query: 1290 IKCSW 1304 +K +W Sbjct: 145 VKINW 149
>O60176:YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c - Schizosaccharomyces| pombe (Fission yeast) Length = 473 Score = 130 bits (326), Expect = 2e-29 Identities = 95/293 (32%), Positives = 146/293 (49%), Gaps = 12/293 (4%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKE----KSSFGFVDYYDQRSAALAIMT 632 ++++G + P VTE + +V+ G + KLIR + + FV++ A+ A M+ Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSA-MS 152 Query: 633 LHGRHIYG--QAIKVNWASASTQREDT---SGHFHIFVGDLSSEVNDATLYACF-STYPS 794 ++ + I G K+NWAS RE + + + IFVGDLS VN+ +Y+ F S Y S Sbjct: 153 MNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNS 212 Query: 795 CSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQ 974 C A++M D +T SRGYGFV F ++ + ++A+ EM G+ G R IR AT + Sbjct: 213 CKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGLATPKSKAHVF 272 Query: 975 ETDNHNAVVLTNGGSSNAAMEANQ--DTGSKENPENNPDFTTVYVGNLGHEVNRDELHRH 1148 N V + G +AA Q DT + +TV+VG L V+ +EL Sbjct: 273 SPVNVVPVSMPPVGFYSAAQPVPQFADTAN----------STVFVGGLSKFVSEEELKYL 322 Query: 1149 FYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 F N G I V++ KG GF+++ A +AI G + I+ SWG Sbjct: 323 FQNF--GEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWG 373 Score = 51.6 bits (122), Expect = 1e-05 Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 33/198 (16%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGS-GPVERCKLIRKEKSS----FGFVDYYDQRSAALAIM 629 S++VG++ PNV E + +F + K++ +++ +GFV + D+ A+ Sbjct: 187 SIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALA 246 Query: 630 TLHGRHIYGQAIKVNWASAST----------------------------QREDTSGHFHI 725 + G+ + I+V A+ + Q DT+ + Sbjct: 247 EMQGQICGDRPIRVGLATPKSKAHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTANST-V 305 Query: 726 FVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMT 905 FVG LS V++ L F + ++ +G GFV F N+Q AE AI ++ Sbjct: 306 FVGGLSKFVSEEELKYLFQNFGEIVYVKIP------PGKGCGFVQFVNRQSAEIAINQLQ 359 Query: 906 GKWLGSRQIRCNWATKTN 959 G LG+ +IR +W N Sbjct: 360 GYPLGNSRIRLSWGRNQN 377 Score = 45.8 bits (107), Expect = 6e-04 Identities = 42/209 (20%), Positives = 88/209 (42%), Gaps = 6/209 (2%) Frame = +3 Query: 687 STQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFR 866 S++ E+ +++G+L V +A + ++T +++ + TG + GY FV F Sbjct: 83 SSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFA 142 Query: 867 NQQEAETAITEMTGKWLGSRQI-RCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEAN 1043 + EA +A++ G+ + + NWA +GG Sbjct: 143 SPHEASSAMSMNNKPIPGTNHLFKLNWA--------------------SGG--------- 173 Query: 1044 QDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHF---YNLGVGA--IEEVRVQQEKGF 1208 G +E + +++VG+L VN +++ F YN A + + + +G+ Sbjct: 174 ---GLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGY 230 Query: 1209 GFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 GF+R++ + A+ G + +PI+ Sbjct: 231 GFVRFTDENDQKSALAEMQGQICGDRPIR 259 Score = 37.0 bits (84), Expect = 0.29 Identities = 23/80 (28%), Positives = 40/80 (50%) Frame = +3 Query: 438 PGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAA 617 P F + +V+VG + V+E L +FQ G + K+ GFV + +++SA Sbjct: 295 PQFADTANSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKI--PPGKGCGFVQFVNRQSAE 352 Query: 618 LAIMTLHGRHIYGQAIKVNW 677 +AI L G + I+++W Sbjct: 353 IAINQLQGYPLGNSRIRLSW 372
>Q6GR16:EPABB_XENLA Embryonic polyadenylate-binding protein-B - Xenopus laevis (African| clawed frog) Length = 629 Score = 111 bits (278), Expect = 9e-24 Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 9/294 (3%) Frame = +3 Query: 438 PGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQRS 611 PG S +V++ N+ ++ L + F G + CK++ E S +GFV + Q + Sbjct: 91 PGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGSRGYGFVHFETQEA 150 Query: 612 AALAIMTLHGRHIYGQAIKVNWASASTQREDTSG-----HFHIFVGDLSSEVNDATLYAC 776 A AI T++G + + + V + +RE G ++++ + +++D L Sbjct: 151 ANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEI 210 Query: 777 FSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKT 956 FS + + +VM DN +GRSRG+GFV++ N +EA+ A+TEM GK + R + A K Sbjct: 211 FSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKR 269 Query: 957 NAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDE 1136 + + + K+ N +YV NL ++ D Sbjct: 270 IERQGELKRKFEQI--------------------KQERINRYQGVNLYVKNLDDGIDDDR 309 Query: 1137 LHRHFYNLGVGAIEEVRVQ--QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 L + F G +V + KGFGF+ +S+ EA A+ NG +V KP+ Sbjct: 310 LRKEFSPYGTITSTKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363 Score = 105 bits (261), Expect = 9e-22 Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 7/283 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMT 632 S+Y+G++HP+VTE +L E F +GP+ ++ R + + ++++ A A+ T Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ I++ W+ SG ++F+ +L +++ LY FS + +V Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLR-KSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKV 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D SRGYGFV F Q+ A AI M G L R++ Sbjct: 131 VCDEY--GSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFV------------------ 170 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 G + E + G+K +FT VY+ N G +++ L F G Sbjct: 171 -------GHFKSRRERELEYGAKV-----MEFTNVYIKNFGEDMDDKRLKEIFSAFGNTL 218 Query: 1173 IEEVRVQ---QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 +V + + +GFGF+ Y H EA A+ NG V G+ + Sbjct: 219 SVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMV 261
>Q9EPH8:PABP1_RAT Polyadenylate-binding protein 1 - Rattus norvegicus (Rat)| Length = 636 Score = 110 bits (275), Expect = 2e-23 Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 7/283 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCK----LIRKEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++HP+VTE +L E F +GP+ + +I + + +V++ A A+ T Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ +++ W+ SG +IF+ +L +++ LY FS + + +V Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLR-KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D S+GYGFV F Q+ AE AI +M G L R++ Sbjct: 131 VCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV------------------ 170 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 G + E + G++ +FT VY+ N G +++ + L F G Sbjct: 171 -------GRFKSRKEREAELGARAK-----EFTNVYIKNFGEDMDDERLKELFGKFGPAL 218 Query: 1173 IEEVRVQQ---EKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 +V + KGFGF+ + H +A A+ NG + GK I Sbjct: 219 SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Score = 98.6 bits (244), Expect = 8e-20 Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 13/295 (4%) Frame = +3 Query: 447 DPSTCRS----VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQR 608 DPS +S +++ N+ ++ L + F G + CK++ E S +GFV + Q Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149 Query: 609 SAALAIMTLHGRHIYGQAIKVNWASASTQREDTSG-----HFHIFVGDLSSEVNDATLYA 773 +A AI ++G + + + V + +RE G ++++ + +++D L Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKE 209 Query: 774 CFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 953 F + +VM D ++G+S+G+GFVSF ++A+ A+ EM GK L +QI A K Sbjct: 210 LFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 Query: 954 TNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRD 1133 E + E + QD ++ N +YV NL ++ + Sbjct: 269 -KVERQTEL-------------KRKFEQMKQDRITRYQGVN------LYVKNLDDGIDDE 308 Query: 1134 ELHRHFYNLGVGAIEEVRVQ--QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 L + F G +V ++ + KGFGF+ +S+ EA A+ NG +V KP+ Sbjct: 309 RLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Score = 70.5 bits (171), Expect = 2e-11 Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 18/224 (8%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTL 635 +VY+ N ++ + L E+F GP K++ E FGFV + A A+ + Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGH---------------FHIFVGDLSSEVNDATLY 770 +G+ + G+ I V A +R+ +++V +L ++D L Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 FS + + + A+VM + GRS+G+GFV F + +EA A+TEM G+ + ++ + Sbjct: 312 KEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV---- 365 Query: 951 KTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 A+ K+E H +N M+ + NP NP Sbjct: 366 -ALAQRKEERQAH---------LTNQYMQRMASVRAVPNPVINP 399 Score = 35.8 bits (81), Expect = 0.64 Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQM 1259 ++YVG+L +V L+ F G + ++ ++ G+ ++ + +A A+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 1260 ANGLVVRGKPIKCSW 1304 N V++GKP++ W Sbjct: 72 MNFDVIKGKPVRIMW 86
>P29341:PABP1_MOUSE Polyadenylate-binding protein 1 - Mus musculus (Mouse)| Length = 636 Score = 110 bits (275), Expect = 2e-23 Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 7/283 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCK----LIRKEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++HP+VTE +L E F +GP+ + +I + + +V++ A A+ T Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ +++ W+ SG +IF+ +L +++ LY FS + + +V Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLR-KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D S+GYGFV F Q+ AE AI +M G L R++ Sbjct: 131 VCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV------------------ 170 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 G + E + G++ +FT VY+ N G +++ + L F G Sbjct: 171 -------GRFKSQKEREAELGARAK-----EFTNVYIKNFGEDMDDERLKELFGKFGPAL 218 Query: 1173 IEEVRVQQ---EKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 +V + KGFGF+ + H +A A+ NG + GK I Sbjct: 219 SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Score = 99.0 bits (245), Expect = 6e-20 Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 13/295 (4%) Frame = +3 Query: 447 DPSTCRS----VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQR 608 DPS +S +++ N+ ++ L + F G + CK++ E S +GFV + Q Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149 Query: 609 SAALAIMTLHGRHIYGQAIKVNWASASTQREDTSG-----HFHIFVGDLSSEVNDATLYA 773 +A AI ++G + + + V + +RE G ++++ + +++D L Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKE 209 Query: 774 CFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 953 F + +VM D ++G+S+G+GFVSF ++A+ A+ EM GK L +QI A K Sbjct: 210 LFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 Query: 954 TNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRD 1133 E + E + QD ++ N +YV NL ++ + Sbjct: 269 -KVERQTEL-------------KRKFEQMKQDRITRYQGVN------LYVKNLDDGIDDE 308 Query: 1134 ELHRHFYNLGVGAIEEVRVQ--QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 L + F G +V ++ + KGFGF+ +S+ EA A+ NG +V KP+ Sbjct: 309 RLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Score = 70.5 bits (171), Expect = 2e-11 Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 18/224 (8%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTL 635 +VY+ N ++ + L E+F GP K++ E FGFV + A A+ + Sbjct: 192 NVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGH---------------FHIFVGDLSSEVNDATLY 770 +G+ + G+ I V A +R+ +++V +L ++D L Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 FS + + + A+VM + GRS+G+GFV F + +EA A+TEM G+ + ++ + Sbjct: 312 KEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV---- 365 Query: 951 KTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 A+ K+E H +N M+ + NP NP Sbjct: 366 -ALAQRKEERQAH---------LTNQYMQRMASVRAVPNPVINP 399 Score = 35.8 bits (81), Expect = 0.64 Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQM 1259 ++YVG+L +V L+ F G + ++ ++ G+ ++ + +A A+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 1260 ANGLVVRGKPIKCSW 1304 N V++GKP++ W Sbjct: 72 MNFDVIKGKPVRIMW 86
>Q6DEY7:EPAB_XENTR Embryonic polyadenylate-binding protein - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 629 Score = 110 bits (274), Expect = 3e-23 Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 9/294 (3%) Frame = +3 Query: 438 PGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQRS 611 PG S +V++ N+ ++ L + F G + CK++ E S +GFV + Q + Sbjct: 91 PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETQEA 150 Query: 612 AALAIMTLHGRHIYGQAIKVNWASASTQREDTSG-----HFHIFVGDLSSEVNDATLYAC 776 A AI T++G + + + V + +RE G ++++ + +++D L Sbjct: 151 ANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREI 210 Query: 777 FSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKT 956 FS + + +VM D+ TGRSRG+GFV++ N +EA+ A++EM GK + R I A K Sbjct: 211 FSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269 Query: 957 NAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDE 1136 + + + K+ N +YV NL ++ D Sbjct: 270 IERQGELKRKFEQI--------------------KQERINRYQGVNLYVKNLDDGIDDDR 309 Query: 1137 LHRHFYNLGVGAIEEVRVQ--QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 L + F G +V + KGFGF+ +S+ EA A+ NG +V KP+ Sbjct: 310 LRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363 Score = 107 bits (267), Expect = 2e-22 Identities = 76/283 (26%), Positives = 127/283 (44%), Gaps = 7/283 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++HP+VTE +L E F +GP+ ++ R + + ++++ A A+ T Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ I++ W+ SG ++F+ +L +++ LY FS + + +V Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLR-KSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKV 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D SRGYGFV F Q+ A AI M G L R++ Sbjct: 131 VCDEH--GSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFV------------------ 170 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 G + E + G+K +FT VY+ N G +++ L F G Sbjct: 171 -------GHFKSRRERELEYGAKV-----MEFTNVYIKNFGEDMDDKRLREIFSAFGNTL 218 Query: 1173 IEEVRVQ---QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 +V + + +GFGF+ Y H EA A+ NG V G+ I Sbjct: 219 SVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMI 261
>P11940:PABP1_HUMAN Polyadenylate-binding protein 1 - Homo sapiens (Human)| Length = 636 Score = 109 bits (273), Expect = 3e-23 Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 7/283 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCK----LIRKEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++HP+VTE +L E F +GP+ + +I + + +V++ A A+ T Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ +++ W+ SG +IF+ +L +++ LY FS + + +V Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLR-KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D S+GYGFV F Q+ AE AI +M G L R++ Sbjct: 131 VCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV------------------ 170 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 G + E + G++ +FT VY+ N G +++ + L F G Sbjct: 171 -------GRFKSRKEREAELGARAK-----EFTNVYIKNFGEDMDDERLKDLFGKFGPAL 218 Query: 1173 IEEVRVQQ---EKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 +V + KGFGF+ + H +A A+ NG + GK I Sbjct: 219 SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Score = 98.2 bits (243), Expect = 1e-19 Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 13/295 (4%) Frame = +3 Query: 447 DPSTCRS----VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQR 608 DPS +S +++ N+ ++ L + F G + CK++ E S +GFV + Q Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149 Query: 609 SAALAIMTLHGRHIYGQAIKVNWASASTQREDTSG-----HFHIFVGDLSSEVNDATLYA 773 +A AI ++G + + + V + +RE G ++++ + +++D L Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKD 209 Query: 774 CFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 953 F + +VM D ++G+S+G+GFVSF ++A+ A+ EM GK L +QI A K Sbjct: 210 LFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 Query: 954 TNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRD 1133 E + E + QD ++ N +YV NL ++ + Sbjct: 269 -KVERQTEL-------------KRKFEQMKQDRITRYQGVN------LYVKNLDDGIDDE 308 Query: 1134 ELHRHFYNLGVGAIEEVRVQ--QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 L + F G +V ++ + KGFGF+ +S+ EA A+ NG +V KP+ Sbjct: 309 RLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Score = 69.3 bits (168), Expect = 5e-11 Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 18/224 (8%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTL 635 +VY+ N ++ + L ++F GP K++ E FGFV + A A+ + Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGH---------------FHIFVGDLSSEVNDATLY 770 +G+ + G+ I V A +R+ +++V +L ++D L Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 FS + + + A+VM + GRS+G+GFV F + +EA A+TEM G+ + ++ + Sbjct: 312 KEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV---- 365 Query: 951 KTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 A+ K+E H +N M+ + NP NP Sbjct: 366 -ALAQRKEERQAH---------LTNQYMQRMASVRAVPNPVINP 399 Score = 35.8 bits (81), Expect = 0.64 Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQM 1259 ++YVG+L +V L+ F G + ++ ++ G+ ++ + +A A+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 1260 ANGLVVRGKPIKCSW 1304 N V++GKP++ W Sbjct: 72 MNFDVIKGKPVRIMW 86
>P61286:PABP1_BOVIN Polyadenylate-binding protein 1 - Bos taurus (Bovine)| Length = 636 Score = 109 bits (273), Expect = 3e-23 Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 7/283 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCK----LIRKEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++HP+VTE +L E F +GP+ + +I + + +V++ A A+ T Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ +++ W+ SG +IF+ +L +++ LY FS + + +V Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLR-KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D S+GYGFV F Q+ AE AI +M G L R++ Sbjct: 131 VCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV------------------ 170 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 G + E + G++ +FT VY+ N G +++ + L F G Sbjct: 171 -------GRFKSRKEREAELGARAK-----EFTNVYIKNFGEDMDDERLKDLFGKFGPAL 218 Query: 1173 IEEVRVQQ---EKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 +V + KGFGF+ + H +A A+ NG + GK I Sbjct: 219 SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Score = 98.2 bits (243), Expect = 1e-19 Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 13/295 (4%) Frame = +3 Query: 447 DPSTCRS----VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQR 608 DPS +S +++ N+ ++ L + F G + CK++ E S +GFV + Q Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149 Query: 609 SAALAIMTLHGRHIYGQAIKVNWASASTQREDTSG-----HFHIFVGDLSSEVNDATLYA 773 +A AI ++G + + + V + +RE G ++++ + +++D L Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKD 209 Query: 774 CFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 953 F + +VM D ++G+S+G+GFVSF ++A+ A+ EM GK L +QI A K Sbjct: 210 LFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 Query: 954 TNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRD 1133 E + E + QD ++ N +YV NL ++ + Sbjct: 269 -KVERQTEL-------------KRKFEQMKQDRITRYQGVN------LYVKNLDDGIDDE 308 Query: 1134 ELHRHFYNLGVGAIEEVRVQ--QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 L + F G +V ++ + KGFGF+ +S+ EA A+ NG +V KP+ Sbjct: 309 RLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Score = 69.3 bits (168), Expect = 5e-11 Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 18/224 (8%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTL 635 +VY+ N ++ + L ++F GP K++ E FGFV + A A+ + Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGH---------------FHIFVGDLSSEVNDATLY 770 +G+ + G+ I V A +R+ +++V +L ++D L Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 FS + + + A+VM + GRS+G+GFV F + +EA A+TEM G+ + ++ + Sbjct: 312 KEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV---- 365 Query: 951 KTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 A+ K+E H +N M+ + NP NP Sbjct: 366 -ALAQRKEERQAH---------LTNQYMQRMASVRAVPNPVINP 399 Score = 35.8 bits (81), Expect = 0.64 Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQM 1259 ++YVG+L +V L+ F G + ++ ++ G+ ++ + +A A+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 1260 ANGLVVRGKPIKCSW 1304 N V++GKP++ W Sbjct: 72 MNFDVIKGKPVRIMW 86
>Q00539:NAM8_YEAST Protein NAM8 - Saccharomyces cerevisiae (Baker's yeast)| Length = 523 Score = 109 bits (273), Expect = 3e-23 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 36/330 (10%) Frame = +3 Query: 426 GNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQ 605 G+L P +D +T R ++ N+ ++ +G R + K + FVD+ Sbjct: 59 GDLDPTWDKNTVRQIWASLGEANINVRMMWNNTLNNG--SRSSMGPKNNQGYCFVDFPSS 116 Query: 606 RSAALAIMTLHGRHIYG---QAIKVNWASASTQREDTS-------GHFHIFVGDLSSEVN 755 AA A++ +G I + +K+NWA++S + S + IFVGDL+ V Sbjct: 117 THAANALLK-NGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCSIFVGDLAPNVT 175 Query: 756 DATLYACF-STYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQI 932 ++ L+ F + Y S S A+++ D TG S+GYGFV F N E + A++EM G +L R I Sbjct: 176 ESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSEMQGVFLNGRAI 235 Query: 933 RCNWATKTNAEEKQETD-NHNAVVLTNGGSSNAAM--------EANQDTGSKEN------ 1067 + + D N ++ L N + + N + G K N Sbjct: 236 KVGPTSGQQQHVSGNNDYNRSSSSLNNENVDSRFLSKGQSFLSNGNNNMGFKRNHMSQFI 295 Query: 1068 ------PENN----PDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFI 1217 P N P+ TTV++G L V DEL +F G I V++ K GF+ Sbjct: 296 YPVQQQPSLNHFTDPNNTTVFIGGLSSLVTEDELRAYFQPF--GTIVYVKIPVGKCCGFV 353 Query: 1218 RYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 +Y A AI G + ++ SWG Sbjct: 354 QYVDRLSAEAAIAGMQGFPIANSRVRLSWG 383 Score = 37.7 bits (86), Expect = 0.17 Identities = 25/83 (30%), Positives = 41/83 (49%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAI 626 DP+ +V++G + VTE+ L FQ G + K+ GFV Y D+ SA AI Sbjct: 309 DPNNT-TVFIGGLSSLVTEDELRAYFQPFGTIVYVKI--PVGKCCGFVQYVDRLSAEAAI 365 Query: 627 MTLHGRHIYGQAIKVNWASASTQ 695 + G I ++++W ++ Q Sbjct: 366 AGMQGFPIANSRVRLSWGRSAKQ 388
>Q98SP8:EPABA_XENLA Embryonic polyadenylate-binding protein-A - Xenopus laevis (African| clawed frog) Length = 629 Score = 109 bits (272), Expect = 5e-23 Identities = 79/296 (26%), Positives = 135/296 (45%), Gaps = 11/296 (3%) Frame = +3 Query: 438 PGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQRS 611 PG S +V++ N+ ++ L + F G + CK++ E S +GFV + + Sbjct: 91 PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETHEA 150 Query: 612 AALAIMTLHGRHIYGQAIKVNWASASTQREDTSG-----HFHIFVGDLSSEVNDATLYAC 776 A AI T++G + + + V + +RE G ++++ + +++D L Sbjct: 151 ANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREI 210 Query: 777 FSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKT 956 FS + + +VM D+ +GRSRG+GFV++ N +EA+ A++EM GK + R I A K Sbjct: 211 FSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269 Query: 957 NAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDE 1136 + + + K+ N +YV NL ++ D Sbjct: 270 IERQSELKRKFEQI--------------------KQERINRYQGVNLYVKNLDDGIDDDR 309 Query: 1137 LHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 L + F L G I +V E KGFGF+ +S+ EA A+ NG +V KP+ Sbjct: 310 LRKEF--LPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPL 363 Score = 106 bits (265), Expect = 3e-22 Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 7/283 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMT 632 S+Y+G++HP+VTE +L E F +GP+ ++ R + S+ ++++ A A+ T Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDT 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ I++ W+ SG ++F+ +L +++ LY FS + + +V Sbjct: 72 MNFEVIKGRPIRIMWSQRDPGLR-KSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKV 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D SRGYGFV F + A AI M G L R++ Sbjct: 131 VCDEH--GSRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFV------------------ 170 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 G + E + G+K +FT VY+ N G +++ L F G Sbjct: 171 -------GHFKSRRERELEYGAKV-----MEFTNVYIKNFGEDMDDKRLREIFSAFGNTL 218 Query: 1173 IEEVRVQ---QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 +V + + +GFGF+ Y H EA A+ NG V G+ I Sbjct: 219 SVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMI 261
>Q6IP09:PABPB_XENLA Polyadenylate-binding protein 1-B - Xenopus laevis (African clawed| frog) Length = 633 Score = 108 bits (271), Expect = 6e-23 Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 7/283 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCK----LIRKEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++HP+VTE +L E F +GP+ + +I + + +V++ A A+ T Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ +++ W+ SG +IF+ +L +++ LY FS + + +V Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLR-KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D S+GYGFV F Q+ AE AI +M G L R++ Sbjct: 131 VCDE--NGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFV------------------ 170 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 G + E + G++ +FT VY+ N G +++ + L F G Sbjct: 171 -------GRFKSRKEREAELGARAK-----EFTNVYIKNFGEDMDDERLKEWFGQYGAAL 218 Query: 1173 IEEVRVQ---QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 +V + +GFGF+ + H +A A+ NG + GK I Sbjct: 219 SVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAI 261 Score = 95.9 bits (237), Expect = 5e-19 Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 20/302 (6%) Frame = +3 Query: 447 DPSTCRS----VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQR 608 DPS +S +++ N+ ++ L + F G + CK++ E S +GFV + Q Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149 Query: 609 SAALAIMTLHGRHIYGQAIKVNWASASTQREDTSG-----HFHIFVGDLSSEVNDATLYA 773 +A AI ++G + + + V + +RE G ++++ + +++D L Sbjct: 150 AAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKE 209 Query: 774 CFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 953 F Y + +VM D+ G+SRG+GFVSF ++A+ A+ +M GK L + I A K Sbjct: 210 WFGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQK 268 Query: 954 -----TNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGH 1118 T + K E + + G +YV NL Sbjct: 269 KVERQTELKRKFEQMKQDRITRYQG-------------------------VNLYVKNLDD 303 Query: 1119 EVNRDELHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGEAALAIQMANGLVVRGK 1286 ++ + L + F G+I +V E KGFGF+ +S+ EA A+ NG +V K Sbjct: 304 GIDDERLRKEF--TPFGSITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 361 Query: 1287 PI 1292 P+ Sbjct: 362 PL 363 Score = 65.1 bits (157), Expect = 1e-09 Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 18/193 (9%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTL 635 +VY+ N ++ + L E F G K++ + FGFV + A A+ + Sbjct: 192 NVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDM 251 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGH---------------FHIFVGDLSSEVNDATLY 770 +G+ + G+AI V A +R+ +++V +L ++D L Sbjct: 252 NGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 F+ + S + A+VM + GRS+G+GFV F + +EA A+TEM G+ + ++ + A Sbjct: 312 KEFTPFGSITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369 Query: 951 KTNAEEKQETDNH 989 + + T+ + Sbjct: 370 RKEERQAHLTNQY 382 Score = 35.8 bits (81), Expect = 0.64 Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQM 1259 ++YVG+L +V L+ F G + ++ ++ G+ ++ + +A A+ Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 1260 ANGLVVRGKPIKCSW 1304 N V++GKP++ W Sbjct: 72 MNFDVIKGKPVRIMW 86
>Q5R8F7:PABP1_PONPY Polyadenylate-binding protein 1 - Pongo pygmaeus (Orangutan)| Length = 636 Score = 108 bits (269), Expect = 1e-22 Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 7/283 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCK----LIRKEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++HP+ TE +L E F +GP+ + +I + + +V++ A A+ T Sbjct: 12 SLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ +++ W+ SG +IF+ +L +++ LY FS + + +V Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLR-KSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D S+GYGFV F Q+ AE AI +M G L R++ Sbjct: 131 VCDE--NGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV------------------ 170 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 G + E + G++ +FT VY+ N G +++ + L F G Sbjct: 171 -------GRFKSRKEREAELGARAK-----EFTNVYIKNFGEDMDDERLKDLFGKFGPAL 218 Query: 1173 IEEVRVQQ---EKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 +V + KGFGF+ + H +A A+ NG + GK I Sbjct: 219 SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Score = 98.2 bits (243), Expect = 1e-19 Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 13/295 (4%) Frame = +3 Query: 447 DPSTCRS----VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQR 608 DPS +S +++ N+ ++ L + F G + CK++ E S +GFV + Q Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149 Query: 609 SAALAIMTLHGRHIYGQAIKVNWASASTQREDTSG-----HFHIFVGDLSSEVNDATLYA 773 +A AI ++G + + + V + +RE G ++++ + +++D L Sbjct: 150 AAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKD 209 Query: 774 CFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 953 F + +VM D ++G+S+G+GFVSF ++A+ A+ EM GK L +QI A K Sbjct: 210 LFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 Query: 954 TNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRD 1133 E + E + QD ++ N +YV NL ++ + Sbjct: 269 -KVERQTEL-------------KRKFEQMKQDRITRYQGVN------LYVKNLDDGIDDE 308 Query: 1134 ELHRHFYNLGVGAIEEVRVQ--QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 L + F G +V ++ + KGFGF+ +S+ EA A+ NG +V KP+ Sbjct: 309 RLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Score = 69.3 bits (168), Expect = 5e-11 Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 18/224 (8%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTL 635 +VY+ N ++ + L ++F GP K++ E FGFV + A A+ + Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGH---------------FHIFVGDLSSEVNDATLY 770 +G+ + G+ I V A +R+ +++V +L ++D L Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 FS + + + A+VM + GRS+G+GFV F + +EA A+TEM G+ + ++ + Sbjct: 312 KEFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV---- 365 Query: 951 KTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 A+ K+E H +N M+ + NP NP Sbjct: 366 -ALAQRKEERQAH---------LTNQYMQRMASVRAVPNPVINP 399 Score = 34.3 bits (77), Expect = 1.9 Identities = 16/75 (21%), Positives = 36/75 (48%), Gaps = 4/75 (5%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQM 1259 ++YVG+L + L+ F G + ++ ++ G+ ++ + +A A+ Sbjct: 12 SLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 1260 ANGLVVRGKPIKCSW 1304 N V++GKP++ W Sbjct: 72 MNFDVIKGKPVRIMW 86
>Q13310:PABP4_HUMAN Polyadenylate-binding protein 4 - Homo sapiens (Human)| Length = 644 Score = 107 bits (267), Expect = 2e-22 Identities = 77/283 (27%), Positives = 128/283 (45%), Gaps = 7/283 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCK----LIRKEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++H +VTE +L E F +GPV + +I + + +V++ A A+ T Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ I++ W+ SG ++F+ +L +++ LY FS + + +V Sbjct: 72 MNFDVIKGKPIRIMWSQRDPSLR-KSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKV 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D S+GY FV F Q+ A+ AI +M G L R++ Sbjct: 131 VCDE--NGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV------------------ 170 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 G + E + G+K +FT VY+ N G EV+ + L F G Sbjct: 171 -------GRFKSRKEREAELGAKAK-----EFTNVYIKNFGEEVDDESLKELFSQFGKTL 218 Query: 1173 IEEVRVQ---QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 +V + KGFGF+ Y H +A A++ NG + GK I Sbjct: 219 SVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261 Score = 94.0 bits (232), Expect = 2e-18 Identities = 76/298 (25%), Positives = 137/298 (45%), Gaps = 16/298 (5%) Frame = +3 Query: 447 DPSTCRS----VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFG--FVDYYDQR 608 DPS +S V++ N+ ++ L + F G + CK++ E S G FV + Q Sbjct: 90 DPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQE 149 Query: 609 SAALAIMTLHGRHIYGQAIKVNWASASTQREDTSG-----HFHIFVGDLSSEVNDATLYA 773 +A AI ++G + + + V + +RE G ++++ + EV+D +L Sbjct: 150 AADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKE 209 Query: 774 CFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQI---RCNW 944 FS + +VM D G+S+G+GFVS+ ++A A+ EM GK + + I R Sbjct: 210 LFSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQK 268 Query: 945 ATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEV 1124 + AE K++ + + Q+ S+ N +Y+ NL + Sbjct: 269 KVERQAELKRKFE-----------------QLKQERISRYQGVN------LYIKNLDDTI 305 Query: 1125 NRDELHRHFYNLGVGAIEEVRVQ--QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 + ++L + F G +V ++ + KGFGF+ +S+ EA A+ NG +V KP+ Sbjct: 306 DDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363 Score = 75.9 bits (185), Expect = 6e-13 Identities = 53/193 (27%), Positives = 93/193 (48%), Gaps = 18/193 (9%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGFVDYYDQRSAALAIMTL 635 +VY+ N V + L E+F G K++R + FGFV Y A A+ + Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251 Query: 636 HGRHIYGQAIKVNWASASTQRE-DTSGHF--------------HIFVGDLSSEVNDATLY 770 +G+ I G+ I V A +R+ + F ++++ +L ++D L Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 FS + S + A+VM ++ GRS+G+GFV F + +EA A+TEM G+ +GS+ + A Sbjct: 312 KEFSPFGSITSAKVMLED--GRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQ 369 Query: 951 KTNAEEKQETDNH 989 + + T+ + Sbjct: 370 RKEERKAHLTNQY 382 Score = 36.6 bits (83), Expect = 0.37 Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQM 1259 ++YVG+L +V L+ F G + ++ ++ G+ ++ + +A A+ Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 1260 ANGLVVRGKPIKCSW 1304 N V++GKPI+ W Sbjct: 72 MNFDVIKGKPIRIMW 86
>P20965:PABPA_XENLA Polyadenylate-binding protein 1-A - Xenopus laevis (African clawed| frog) Length = 633 Score = 107 bits (266), Expect = 2e-22 Identities = 74/281 (26%), Positives = 127/281 (45%), Gaps = 7/281 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++H +VTE +L E F +GP+ ++ R + + +V++ A A+ T Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ +++ W+ SG +IF+ +L +++ LY FS + + +V Sbjct: 72 MNFDVIKGRPVRIMWSQRDPSLRK-SGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKV 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D S+GYGFV F Q+ AE AI +M G L R++ Sbjct: 131 VCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFV------------------ 170 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 G + E + G++ +FT VY+ N G ++N + L F G Sbjct: 171 -------GRFKSRKEREAELGARAK-----EFTNVYIKNFGDDMNDERLKEMFGKYGPAL 218 Query: 1173 IEEVRVQ---QEKGFGFIRYSTHGEAALAIQMANGLVVRGK 1286 +V + KGFGF+ + H +A A+ NG + GK Sbjct: 219 SVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGK 259 Score = 97.8 bits (242), Expect = 1e-19 Identities = 78/297 (26%), Positives = 134/297 (45%), Gaps = 15/297 (5%) Frame = +3 Query: 447 DPSTCRS----VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQR 608 DPS +S +++ N+ ++ L + F G + CK++ E S +GFV + Q Sbjct: 90 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQE 149 Query: 609 SAALAIMTLHGRHIYGQAIKVNWASASTQREDTSG-----HFHIFVGDLSSEVNDATLYA 773 +A AI ++G + + + V + +RE G ++++ + ++ND L Sbjct: 150 AAERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKE 209 Query: 774 CFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 953 F Y +VM D+ G+S+G+GFVSF ++A+ A+ EM GK + + + A K Sbjct: 210 MFGKYGPALSVKVMTDDN-GKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQK 268 Query: 954 TNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRD 1133 E + E + QD ++ N +YV NL ++ + Sbjct: 269 -KVERQTEL-------------KRKFEQMKQDRITRYQGVN------LYVKNLDDGIDDE 308 Query: 1134 ELHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 L + F L G I +V E KGFGF+ +S+ EA A+ NG +V KP+ Sbjct: 309 RLRKEF--LPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Score = 65.5 bits (158), Expect = 8e-10 Identities = 45/193 (23%), Positives = 90/193 (46%), Gaps = 18/193 (9%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTL 635 +VY+ N ++ + L E+F GP K++ + FGFV + A A+ + Sbjct: 192 NVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGH---------------FHIFVGDLSSEVNDATLY 770 +G+ + G+++ V A +R+ +++V +L ++D L Sbjct: 252 NGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 F + + + A+VM + GRS+G+GFV F + +EA A+TEM G+ + ++ + A Sbjct: 312 KEFLPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQ 369 Query: 951 KTNAEEKQETDNH 989 + + T+ + Sbjct: 370 RKEERQAHLTNQY 382
>Q9H361:PABP3_HUMAN Polyadenylate-binding protein 3 - Homo sapiens (Human)| Length = 631 Score = 107 bits (266), Expect = 2e-22 Identities = 76/283 (26%), Positives = 127/283 (44%), Gaps = 7/283 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCK----LIRKEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++HP+VTE +L E F +GP+ + LI S++ +V++ + A A+ T Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDT 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ +++ W+ SG +IFV +L +N+ LY S + + V Sbjct: 72 MNFDVIKGKPVRIMWSQRDPSLR-KSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNV 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D S+GYGFV F + AE AI +M G L R++ Sbjct: 131 VCDE--NGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFV------------------ 170 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 G + E + G++ +F VY+ N G +++ + L F G Sbjct: 171 -------GQFKSRKEREAELGARAK-----EFPNVYIKNFGEDMDDERLKDLFGKFGPAL 218 Query: 1173 IEEVRVQQ---EKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 +V + KGFGF+ + H +A A+ NG + GK I Sbjct: 219 SVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261 Score = 94.7 bits (234), Expect = 1e-18 Identities = 75/295 (25%), Positives = 134/295 (45%), Gaps = 13/295 (4%) Frame = +3 Query: 447 DPSTCRS----VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQR 608 DPS +S ++V N+ ++ L + G + C ++ E S +GFV + Sbjct: 90 DPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHE 149 Query: 609 SAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF-----HIFVGDLSSEVNDATLYA 773 +A AI ++G + G+ + V + +RE G ++++ + +++D L Sbjct: 150 AAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKD 209 Query: 774 CFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 953 F + +VM D ++G+S+G+GFVSF ++A+ A+ EM GK L +QI A K Sbjct: 210 LFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268 Query: 954 TNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRD 1133 E + E + QD ++ N +YV NL ++ + Sbjct: 269 -KVERQTEL-------------KRTFEQMKQDRITRYQVVN------LYVKNLDDGIDDE 308 Query: 1134 ELHRHFYNLGVGAIEEVRVQ--QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 L + F G +V ++ + KGFGF+ +S+ EA A+ NG +V KP+ Sbjct: 309 RLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363 Score = 70.1 bits (170), Expect = 3e-11 Identities = 49/188 (26%), Positives = 89/188 (47%), Gaps = 18/188 (9%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTL 635 +VY+ N ++ + L ++F GP K++ E FGFV + A A+ + Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGH---------------FHIFVGDLSSEVNDATLY 770 +G+ + G+ I V A +R+ +++V +L ++D L Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLR 311 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 FS + + + A+VM + GRS+G+GFV F + +EA A+TEM G+ + ++ + A Sbjct: 312 KAFSPFGTITSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYV--AL 367 Query: 951 KTNAEEKQ 974 EE+Q Sbjct: 368 AQRKEERQ 375
>O13759:CSX1_SCHPO RNA-binding post-transcriptional regulator csx1 - Schizosaccharomyces| pombe (Fission yeast) Length = 632 Score = 105 bits (261), Expect = 9e-22 Identities = 83/295 (28%), Positives = 139/295 (47%), Gaps = 13/295 (4%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS------FGFVDYYDQRSAALAI 626 ++++G++ P + + +++ K++R + SS + FV + +A A+ Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERAL 145 Query: 627 MTLHGRHIYGQ--AIKVNWASASTQREDT----SGHFHIFVGDLSSEVNDATLYACF-ST 785 M + I G K+NWA+ + + F IFVGDL D+ L+ F S Sbjct: 146 MKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSI 205 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAE 965 YPSC+ A+++ D TG SR YGFV F +++E + A+ M G R +R + A+ + Sbjct: 206 YPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVAS-PKSR 264 Query: 966 EKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHR 1145 D+ +V T S + + NQD S + P TTV+VG L ++ +L Sbjct: 265 ASIAADSALGIVPT----STSNRQPNQDLCSMD-----PLNTTVFVGGLASNLSEKDLQV 315 Query: 1146 HFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWGN 1310 F G I +++ KG GF++YS A AI G +V I+ +WG+ Sbjct: 316 CFQPF--GRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGH 368
>P32831:NGR1_YEAST Negative growth regulatory protein NGR1 - Saccharomyces cerevisiae| (Baker's yeast) Length = 672 Score = 103 bits (257), Expect = 2e-21 Identities = 81/268 (30%), Positives = 117/268 (43%), Gaps = 49/268 (18%) Frame = +3 Query: 651 YGQAIKVNWASASTQRED--TSGHFHIFVGDLSSEVNDATLYACFST-YPSCSDARVMWD 821 + + ++NWAS +T + ++ F +FVGDLS +A L + F T + S RVM D Sbjct: 168 FKRTFRLNWASGATLQSSIPSTPEFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTD 227 Query: 822 NKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTN-------------- 959 TG SR +GFV F ++ E A+ EM+GKW R +R +AT N Sbjct: 228 PLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATPRNNMMLQLQEQQQQQQ 287 Query: 960 --AEEKQETDN----------------------------HNA--VVLTNGGSSNAAMEAN 1043 ++ Q+ D HNA + L GG SN M N Sbjct: 288 QLQQQHQQLDQEDNNGPLLIKTANNLIQNNSNMLPLNALHNAPPMHLNEGGISN--MRVN 345 Query: 1044 QDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRY 1223 D+ +P TTV+VG L + +L F G I VR+ K GF+++ Sbjct: 346 -DSLPSNTYNTDPTNTTVFVGGLVPKTTEFQLRSLFKPF--GPILNVRIPNGKNCGFVKF 402 Query: 1224 STHGEAALAIQMANGLVVRGKPIKCSWG 1307 +A +IQ G +V G PI+ SWG Sbjct: 403 EKRIDAEASIQGLQGFIVGGSPIRLSWG 430 Score = 38.1 bits (87), Expect = 0.13 Identities = 25/88 (28%), Positives = 43/88 (48%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAI 626 DP T +V+VG + P TE L +F+ GP+ ++ + GFV + + A +I Sbjct: 356 DP-TNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRI--PNGKNCGFVKFEKRIDAEASI 412 Query: 627 MTLHGRHIYGQAIKVNWASASTQREDTS 710 L G + G I+++W S+ T+ Sbjct: 413 QGLQGFIVGGSPIRLSWGRPSSSNAKTN 440 Score = 35.8 bits (81), Expect = 0.64 Identities = 25/114 (21%), Positives = 46/114 (40%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG L + + L + F + + R+ + GFV F + +AE +I + Sbjct: 362 VFVGGLVPKTTEFQLRSLFKPFGPILNVRIP------NGKNCGFVKFEKRIDAEASIQGL 415 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKE 1064 G +G IR +W +++ K + A + A A+ SK+ Sbjct: 416 QGFIVGGSPIRLSWGRPSSSNAKTNSTIMGASQYMSSNGLRAPSAASSVDNSKQ 469 Score = 35.0 bits (79), Expect = 1.1 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 8/86 (9%) Frame = +3 Query: 450 PSTCR-SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR-------KEKSSFGFVDYYDQ 605 PST S++VG++ P TE L+ +FQ + K +R FGFV + D+ Sbjct: 187 PSTPEFSLFVGDLSPTATEADLLSLFQTR--FKSVKTVRVMTDPLTGSSRCFGFVRFGDE 244 Query: 606 RSAALAIMTLHGRHIYGQAIKVNWAS 683 A++ + G+ G+A++V +A+ Sbjct: 245 DERRRALIEMSGKWFQGRALRVAYAT 270
>Q4VXU2:PAP1L_HUMAN Polyadenylate-binding protein 1-like - Homo sapiens (Human)| Length = 614 Score = 98.6 bits (244), Expect = 8e-20 Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 9/283 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++HP+VTE +L E F +GP+ ++ R + + ++++ A A+ T Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ + GQ I++ W+ SG +IF+ +L +++ LY FST+ + +V Sbjct: 72 MNFEMLKGQPIRIMWSQRDPGLR-KSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKV 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 D SRG+GFV F + A+ AI M G L R++ Sbjct: 131 ACDEH--GSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFV------------------ 170 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 G + E + G++ +FT +YV NL +V+ L F G Sbjct: 171 -------GHFKSRREREAELGARA-----LEFTNIYVKNLPVDVDEQGLQDLFSQF--GK 216 Query: 1173 IEEVRVQQEKG-----FGFIRYSTHGEAALAIQMANGLVVRGK 1286 + V+V ++ FGF+ + H EA A+ NG V G+ Sbjct: 217 MLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259 Score = 98.6 bits (244), Expect = 8e-20 Identities = 80/294 (27%), Positives = 131/294 (44%), Gaps = 9/294 (3%) Frame = +3 Query: 438 PGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--FGFVDYYDQRS 611 PG S ++++ N+ ++ L + F G + CK+ E S FGFV + + Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150 Query: 612 AALAIMTLHGRHIYGQAIKVNWASASTQREDTSG-----HFHIFVGDLSSEVNDATLYAC 776 A AI T++G + + + V + +RE G +I+V +L +V++ L Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210 Query: 777 FSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKT 956 FS + +VM DN +G SR +GFV+F +EA+ A+ M GK + R + A K Sbjct: 211 FSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK- 268 Query: 957 NAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDE 1136 E + E + QD + N +YV NL ++ D+ Sbjct: 269 RVERQNELKRRFE-------------QMKQDRLRRYQGVN------LYVKNLDDSIDDDK 309 Query: 1137 LHRHFYNLGVGAIEEVRVQ--QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 L + F GV +V + KGFGF+ +S+ EA A+ NG +V KP+ Sbjct: 310 LRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363 Score = 70.1 bits (170), Expect = 3e-11 Identities = 52/216 (24%), Positives = 100/216 (46%), Gaps = 18/216 (8%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTL 635 ++YV N+ +V E L ++F G + K++R FGFV++ A A++ + Sbjct: 192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHM 251 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGH---------------FHIFVGDLSSEVNDATLY 770 +G+ + G+ + A +R++ +++V +L ++D L Sbjct: 252 NGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLR 311 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 FS Y + A+VM + G S+G+GFV F + +EA A+TEM G+ +G++ + A Sbjct: 312 KEFSPYGVITSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQ 369 Query: 951 KTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGS 1058 + + T+ + + T SN + + Q S Sbjct: 370 RKEERKAILTNQYMQRLSTMRTLSNPLLGSFQQPSS 405
>P42731:PABP2_ARATH Polyadenylate-binding protein 2 - Arabidopsis thaliana (Mouse-ear| cress) Length = 629 Score = 98.2 bits (243), Expect = 1e-19 Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 9/277 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCK----LIRKEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++ NVT++ L + F G V + L+ + +G+V++ + + AA AI Sbjct: 37 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 96 Query: 633 LHGRHIYGQAIKVNWA--SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDA 806 L+ +YG+ I+V ++ S +R SG +IF+ +L ++ L+ FS++ + Sbjct: 97 LNYIPLYGKPIRVMYSHRDPSVRR---SGAGNIFIKNLDESIDHKALHDTFSSFGNIVSC 153 Query: 807 RVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDN 986 +V D+ +G+S+GYGFV + N++ A+ AI ++ G L +Q+ + +QE D Sbjct: 154 KVAVDS-SGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLR-----RQERD- 206 Query: 987 HNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGV 1166 + N FT VYV NL D+L F G Sbjct: 207 --------------------------STANKTKFTNVYVKNLAESTTDDDLKNAFGEYGK 240 Query: 1167 GAIEEVRVQQE---KGFGFIRYSTHGEAALAIQMANG 1268 V E KGFGF+ + +AA A++ NG Sbjct: 241 ITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNG 277 Score = 84.0 bits (206), Expect = 2e-15 Identities = 72/295 (24%), Positives = 128/295 (43%), Gaps = 13/295 (4%) Frame = +3 Query: 447 DPSTCRS----VYVGNVHPNVTENLLIEVFQGSGPVERCKLI---RKEKSSFGFVDYYDQ 605 DPS RS +++ N+ ++ L + F G + CK+ + +GFV Y ++ Sbjct: 115 DPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANE 174 Query: 606 RSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF---HIFVGDLSSEVNDATLYAC 776 SA AI L+G + + + V +R+ T+ +++V +L+ D L Sbjct: 175 ESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNA 234 Query: 777 FSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKT 956 F Y + A VM D + G+S+G+GFV+F N +A A+ + G ++ W Sbjct: 235 FGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFDDKE----WYV-G 288 Query: 957 NAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDE 1136 A++K E + V E N + + +N +YV NL ++ ++ Sbjct: 289 RAQKKSERETELRV----------RYEQNLKEAADKFQSSN-----LYVKNLDPSISDEK 333 Query: 1137 LHRHFYNLGVGAIEEVRVQ---QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 L F G +V KG GF+ ++T EA A+ +G ++ KP+ Sbjct: 334 LKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPL 388 Score = 69.3 bits (168), Expect = 5e-11 Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 5/230 (2%) Frame = +3 Query: 618 LAIMTLHGRHIYGQAIKVNWASASTQREDTS--GHFHIFVGDLSSEVNDATLYACFSTYP 791 +A + L G+ G V A A++ + G+ ++VGDL V D+ L+ F Sbjct: 1 MAQVQLQGQTPNGSTAAVTSAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMG 60 Query: 792 SCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEK 971 + RV D T RS GYG+V+F N Q+A AI E+ L + IR + Sbjct: 61 TVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMY--------- 111 Query: 972 QETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHF 1151 +H + G+ N +++ NL ++ LH F Sbjct: 112 ----SHRDPSVRRSGAGN-----------------------IFIKNLDESIDHKALHDTF 144 Query: 1152 YNLGVGAIEEVRVQ---QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 + G +V V Q KG+GF++Y+ A AI+ NG+++ K + Sbjct: 145 SSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQV 194 Score = 40.8 bits (94), Expect = 0.020 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 4/106 (3%) Frame = +3 Query: 1005 TNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGA 1172 T GS+ A A +G + T++YVG+L V +L F +G V Sbjct: 10 TPNGSTAAVTSAPATSGGATATQFGN--TSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRV 67 Query: 1173 IEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWGN 1310 ++ ++ G+G++ ++ +AA AIQ N + + GKPI+ + + Sbjct: 68 CRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSH 113 Score = 35.8 bits (81), Expect = 0.64 Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Frame = +3 Query: 429 NLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYY 599 NL D ++YV N+ P++++ L E+F G V K++R + GFV + Sbjct: 307 NLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFA 366 Query: 600 DQRSAALAIMTLHGRHIYGQAIKVNWASASTQR 698 A A+ L G+ I + + V A R Sbjct: 367 TPEEATEAMSQLSGKMIESKPLYVAIAQRKEDR 399
>Q05196:PABP5_ARATH Polyadenylate-binding protein 5 - Arabidopsis thaliana (Mouse-ear| cress) Length = 668 Score = 97.8 bits (242), Expect = 1e-19 Identities = 70/275 (25%), Positives = 128/275 (46%), Gaps = 6/275 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVER---CKLIRKEKSSFGFVDYYDQRSAALAIMTL 635 S+YVG++ P+V E+ L+++F PV C+ + + +V++ + A+ A+ +L Sbjct: 46 SLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASRAMESL 105 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVM 815 + I + I++ ++ SG ++F+ +L + +++ LY FS++ + +V Sbjct: 106 NYAPIRDRPIRIMLSNRDPSTR-LSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVA 164 Query: 816 WDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNA 995 D GRS+GYGFV F ++ A+ AI ++ G L +Q+ + + E+ A Sbjct: 165 MD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSES---GA 220 Query: 996 VVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAI 1175 V P FT VYV NL E+ DEL + F G + Sbjct: 221 V---------------------------PSFTNVYVKNLPKEITDDELKKTFGKYGDISS 253 Query: 1176 EEVRVQQ---EKGFGFIRYSTHGEAALAIQMANGL 1271 V Q + FGF+ + + AA+A++ NG+ Sbjct: 254 AVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGI 288 Score = 85.5 bits (210), Expect = 7e-16 Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 15/297 (5%) Frame = +3 Query: 447 DPSTCRS----VYVGNVHPNVTENLLIEVFQGSGPVERCKL---IRKEKSSFGFVDYYDQ 605 DPST S V++ N+ ++ L E F G + CK+ + +GFV + + Sbjct: 123 DPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKE 182 Query: 606 RSAALAIMTLHGRHIYGQAIKV-NWASASTQREDTSGHF----HIFVGDLSSEVNDATLY 770 +A AI L+G + + + V ++ + SG +++V +L E+ D L Sbjct: 183 ETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELK 242 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 F Y S A VM D ++G SR +GFV+F + + A A+ +M G LG + A Sbjct: 243 KTFGKYGDISSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQ 301 Query: 951 KTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNR 1130 K + E++ L + GS +Y+ NL VN Sbjct: 302 KKSDREEE---------LRRKFEQERISRFEKLQGSN-----------LYLKNLDDSVND 341 Query: 1131 DELHRHFYNLGVGAIEEVRVQQE---KGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 ++L F G +V + + +GFGF+ YS EA LA++ NG ++ KP+ Sbjct: 342 EKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPL 398 Score = 74.7 bits (182), Expect = 1e-12 Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 18/188 (9%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS---SFGFVDYYDQRSAALAIMTL 635 +VYV N+ +T++ L + F G + +++ + SFGFV++ +AA+A+ + Sbjct: 226 NVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKM 285 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGH---------------FHIFVGDLSSEVNDATLY 770 +G + + V A + RE+ ++++ +L VND L Sbjct: 286 NGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLK 345 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 FS Y + + +VM N G SRG+GFV++ N +EA A+ EM GK +G + + A Sbjct: 346 EMFSEYGNVTSCKVMM-NSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYV--AL 402 Query: 951 KTNAEEKQ 974 EE+Q Sbjct: 403 AQRKEERQ 410 Score = 57.4 bits (137), Expect = 2e-07 Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 3/215 (1%) Frame = +3 Query: 657 QAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGR 836 Q V A+A+ + T + ++VGDL VN++ L F+ + RV D T R Sbjct: 25 QVAAVAAAAAAAEALQTHPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHR 83 Query: 837 SRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGG 1016 S GY +V+F N ++A A+ + + R IR Sbjct: 84 SLGYAYVNFANPEDASRAMESLNYAPIRDRPIR--------------------------- 116 Query: 1017 SSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVR--- 1187 M +N+D ++ + + N V++ NL ++ L+ F + G +V Sbjct: 117 ----IMLSNRDPSTRLSGKGN-----VFIKNLDASIDNKALYETFSSFGTILSCKVAMDV 167 Query: 1188 VQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 V + KG+GF+++ A AI NG+++ K + Sbjct: 168 VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQV 202
>P31209:PABP_SCHPO Polyadenylate-binding protein - Schizosaccharomyces pombe (Fission| yeast) Length = 653 Score = 94.7 bits (234), Expect = 1e-18 Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 7/293 (2%) Frame = +3 Query: 435 PPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYD 602 P G P T S+YVG + P+VTE +L E+F GPV ++ R + + +V++++ Sbjct: 72 PSGTAP-TSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHN 130 Query: 603 QRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFS 782 A+ L+ I G+ ++ W+ G ++F+ +L +++ L+ FS Sbjct: 131 MEDGEKALDELNYTLIKGRPCRIMWSQRDPSLR-KMGTGNVFIKNLDPAIDNKALHDTFS 189 Query: 783 TYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNA 962 + +V D + G ++GYGFV F + + A AI + G L +++ + Sbjct: 190 AFGKILSCKVAVD-ELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYV--GHHVSR 246 Query: 963 EEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELH 1142 E+Q S A++AN FT VY+ NL E+ E Sbjct: 247 RERQ--------------SKVEALKAN--------------FTNVYIKNLDTEITEQEFS 278 Query: 1143 RHFYNLG-VGAIEEVRVQQEK--GFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 F G + ++ V+ Q +K GFGF+ Y+ H A A+ N +GK + Sbjct: 279 DLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKL 331 Score = 75.1 bits (183), Expect = 9e-13 Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 18/188 (9%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTL 635 +VY+ N+ +TE ++F G + L++ + FGFV+Y + A A+ L Sbjct: 262 NVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDEL 321 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGH---------------FHIFVGDLSSEVNDATLY 770 + + G+ + V A +RE+ ++F+ +L EV+D L Sbjct: 322 NDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLK 381 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 A FS + + + A++M D + G+S+G+GFV + +EA A+TEM + L + + A Sbjct: 382 AEFSAFGTITSAKIMTDEQ-GKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQ 440 Query: 951 KTNAEEKQ 974 + Q Sbjct: 441 RKEVRRSQ 448 Score = 74.7 bits (182), Expect = 1e-12 Identities = 59/287 (20%), Positives = 123/287 (42%), Gaps = 11/287 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTL 635 +V++ N+ P + L + F G + CK+ E + +GFV + SA AI + Sbjct: 169 NVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHV 228 Query: 636 HGRHIYGQAIKVNWASASTQREDT-----SGHFHIFVGDLSSEVNDATLYACFSTYPSCS 800 +G + + + V + +R+ + ++++ +L +E+ + F + + Sbjct: 229 NGMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEIT 288 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQET 980 ++ D + + RG+GFV++ N + A+ A+ E+ K +++ A K + E++ Sbjct: 289 SLSLVKD-QNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELR 347 Query: 981 DNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNL 1160 + + L N +++ NL EV+ + L F Sbjct: 348 KRYEQMKLEK--------------------MNKYQGVNLFIKNLQDEVDDERLKAEFSAF 387 Query: 1161 GVGAIEEVRVQQE---KGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 G ++ ++ KGFGF+ Y+T EA A+ N ++ GKP+ Sbjct: 388 GTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPL 434 Score = 64.3 bits (155), Expect = 2e-09 Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 3/210 (1%) Frame = +3 Query: 672 NWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYG 851 N +S +T ++VG+L V +A L+ F++ + RV D T RS GY Sbjct: 65 NASSVATPSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYA 124 Query: 852 FVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAA 1031 +V+F N ++ E A+ E+ + R R W+ + + K T N Sbjct: 125 YVNFHNMEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGN--------------- 169 Query: 1032 MEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQ---EK 1202 V++ NL ++ LH F G +V V + K Sbjct: 170 ---------------------VFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAK 208 Query: 1203 GFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 G+GF+ + + A AI+ NG+++ K + Sbjct: 209 GYGFVHFDSVESANAAIEHVNGMLLNDKKV 238
>P60050:PABP5_PONPY Polyadenylate-binding protein 5 - Pongo pygmaeus (Orangutan)| Length = 382 Score = 94.4 bits (233), Expect = 2e-18 Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 9/283 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMT 632 ++YVG++ P+VTE++L + F+ +GP+ ++ R + +G+V++ A A+ T Sbjct: 19 ALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNT 78 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ ++ W S R SG +IF+ +L +++ L+ FS + + +V Sbjct: 79 MNFDLINGKPFRLMW-SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D+ S+GY +V F + A AI M G L +RQ+ Sbjct: 138 VCDD--NGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV------------------ 177 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 + ++ ++ + FT V+V N+G +++ ++L F G Sbjct: 178 -----------GRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCE--YGP 224 Query: 1173 IEEVRVQQE-----KGFGFIRYSTHGEAALAIQMANGLVVRGK 1286 E V+V ++ KGFGF+RY TH A A+ +G + GK Sbjct: 225 TESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267 Score = 82.0 bits (201), Expect = 8e-15 Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 18/180 (10%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGFVDYYDQRSAA 617 D +T +V+V N+ ++ + L E+F GP E K+IR + FGFV Y +A Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQ 253 Query: 618 LAIMTLHGRHIYGQAIKVNWASASTQR---------------EDTSGHFHIFVGDLSSEV 752 A++ LHG+ I G+ + V A +R + I++ +L + Sbjct: 254 KAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETI 313 Query: 753 NDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQI 932 ND L FS++ S S A+VM + G+ +G+G V F + +EA A+ EM G+ +GS+ + Sbjct: 314 NDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPL 371 Score = 81.3 bits (199), Expect = 1e-14 Identities = 64/291 (21%), Positives = 130/291 (44%), Gaps = 10/291 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVD-YYDQRSAA------LA 623 ++++ N+ ++ L +F G + CK++ + S G+ ++D +AA + Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMN 166 Query: 624 IMTLHGRHIYGQAIKV-NWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCS 800 + L+ R +Y K +A + D + ++FV ++ +++D L F Y Sbjct: 167 GVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTE 226 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQET 980 +V+ D +G+S+G+GFV + + A+ A+ ++ GK + + + A++K E Sbjct: 227 SVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVG-----RAQKKIE- 279 Query: 981 DNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNL 1160 A + + ++ P +Y+ NL +N ++L F + Sbjct: 280 --------------RLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSF 325 Query: 1161 GVGAIEEV--RVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 G + +V V Q KGFG + +S+ EA A+ NG +V KP+ + G Sbjct: 326 GSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376 Score = 34.7 bits (78), Expect = 1.4 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 +YVG+L +V D L++ F G + + G+G++ + +A A+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 1263 NGLVVRGKPIKCSW 1304 N ++ GKP + W Sbjct: 80 NFDLINGKPFRLMW 93
>P60049:PABP5_PANTR Polyadenylate-binding protein 5 - Pan troglodytes (Chimpanzee)| Length = 382 Score = 94.4 bits (233), Expect = 2e-18 Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 9/283 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMT 632 ++YVG++ P+VTE++L + F+ +GP+ ++ R + +G+V++ A A+ T Sbjct: 19 ALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNT 78 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ ++ W S R SG +IF+ +L +++ L+ FS + + +V Sbjct: 79 MNFDLINGKPFRLMW-SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D+ S+GY +V F + A AI M G L +RQ+ Sbjct: 138 VCDD--NGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV------------------ 177 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 + ++ ++ + FT V+V N+G +++ ++L F G Sbjct: 178 -----------GRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCE--YGP 224 Query: 1173 IEEVRVQQE-----KGFGFIRYSTHGEAALAIQMANGLVVRGK 1286 E V+V ++ KGFGF+RY TH A A+ +G + GK Sbjct: 225 TESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267 Score = 82.0 bits (201), Expect = 8e-15 Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 18/180 (10%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGFVDYYDQRSAA 617 D +T +V+V N+ ++ + L E+F GP E K+IR + FGFV Y +A Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQ 253 Query: 618 LAIMTLHGRHIYGQAIKVNWASASTQR---------------EDTSGHFHIFVGDLSSEV 752 A++ LHG+ I G+ + V A +R + I++ +L + Sbjct: 254 KAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETI 313 Query: 753 NDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQI 932 ND L FS++ S S A+VM + G+ +G+G V F + +EA A+ EM G+ +GS+ + Sbjct: 314 NDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPL 371 Score = 81.3 bits (199), Expect = 1e-14 Identities = 64/291 (21%), Positives = 130/291 (44%), Gaps = 10/291 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVD-YYDQRSAA------LA 623 ++++ N+ ++ L +F G + CK++ + S G+ ++D +AA + Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMN 166 Query: 624 IMTLHGRHIYGQAIKV-NWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCS 800 + L+ R +Y K +A + D + ++FV ++ +++D L F Y Sbjct: 167 GVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTE 226 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQET 980 +V+ D +G+S+G+GFV + + A+ A+ ++ GK + + + A++K E Sbjct: 227 SVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVG-----RAQKKIE- 279 Query: 981 DNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNL 1160 A + + ++ P +Y+ NL +N ++L F + Sbjct: 280 --------------RLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSF 325 Query: 1161 GVGAIEEV--RVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 G + +V V Q KGFG + +S+ EA A+ NG +V KP+ + G Sbjct: 326 GSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376 Score = 34.7 bits (78), Expect = 1.4 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 +YVG+L +V D L++ F G + + G+G++ + +A A+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 1263 NGLVVRGKPIKCSW 1304 N ++ GKP + W Sbjct: 80 NFDLINGKPFRLMW 93
>Q7JGR2:PABP5_MACMU Polyadenylate-binding protein 5 - Macaca mulatta (Rhesus macaque)| Length = 382 Score = 94.4 bits (233), Expect = 2e-18 Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 9/283 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMT 632 ++YVG++ P+VTE++L + F+ +GP+ ++ R + +G+V++ A A+ T Sbjct: 19 ALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNT 78 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ ++ W S R SG +IF+ +L +++ L+ FS + + +V Sbjct: 79 MNFDLINGKPFRLMW-SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D+ S+GY +V F + A AI M G L +RQ+ Sbjct: 138 VCDD--NGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV------------------ 177 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 + ++ ++ + FT V+V N+G +++ ++L F G Sbjct: 178 -----------GRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCE--YGP 224 Query: 1173 IEEVRVQQE-----KGFGFIRYSTHGEAALAIQMANGLVVRGK 1286 E V+V ++ KGFGF+RY TH A A+ +G + GK Sbjct: 225 TESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267 Score = 82.0 bits (201), Expect = 8e-15 Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 18/180 (10%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGFVDYYDQRSAA 617 D +T +V+V N+ ++ + L E+F GP E K+IR + FGFV Y +A Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQ 253 Query: 618 LAIMTLHGRHIYGQAIKVNWASASTQR---------------EDTSGHFHIFVGDLSSEV 752 A++ LHG+ I G+ + V A +R + I++ +L + Sbjct: 254 KAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETI 313 Query: 753 NDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQI 932 ND L FS++ S S A+VM + G+ +G+G V F + +EA A+ EM G+ +GS+ + Sbjct: 314 NDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPL 371 Score = 81.6 bits (200), Expect = 1e-14 Identities = 65/291 (22%), Positives = 130/291 (44%), Gaps = 10/291 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVD-YYDQRSAA------LA 623 ++++ N+ ++ L +F G + CK++ + S G+ ++D +AA + Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMN 166 Query: 624 IMTLHGRHIYGQAIKV-NWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCS 800 + L+ R +Y K +A + D + ++FV ++ +++D L F Y Sbjct: 167 GVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTE 226 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQET 980 +V+ D +G+S+G+GFV + + A+ A+ ++ GK + + + A++K E Sbjct: 227 SVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVG-----RAQKKIE- 279 Query: 981 DNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNL 1160 A + + ++ P +Y+ NL +N ++L F + Sbjct: 280 --------------RLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSF 325 Query: 1161 GVGAIEEV--RVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 G + +V V Q KGFG + +S+ EA A+ NG VV KP+ + G Sbjct: 326 GSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLG 376 Score = 34.7 bits (78), Expect = 1.4 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 +YVG+L +V D L++ F G + + G+G++ + +A A+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 1263 NGLVVRGKPIKCSW 1304 N ++ GKP + W Sbjct: 80 NFDLINGKPFRLMW 93
>P60048:PABP5_HYLLA Polyadenylate-binding protein 5 - Hylobates lar (Common gibbon)| Length = 382 Score = 94.4 bits (233), Expect = 2e-18 Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 9/283 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMT 632 ++YVG++ P+VTE++L + F+ +GP+ ++ R + +G+V++ A A+ T Sbjct: 19 ALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNT 78 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ ++ W S R SG +IF+ +L +++ L+ FS + + +V Sbjct: 79 MNFDLINGKPFRLMW-SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D+ S+GY +V F + A AI M G L +RQ+ Sbjct: 138 VCDD--NGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV------------------ 177 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 + ++ ++ + FT V+V N+G +++ ++L F G Sbjct: 178 -----------GRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCE--YGP 224 Query: 1173 IEEVRVQQE-----KGFGFIRYSTHGEAALAIQMANGLVVRGK 1286 E V+V ++ KGFGF+RY TH A A+ +G + GK Sbjct: 225 TESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267 Score = 82.0 bits (201), Expect = 8e-15 Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 18/180 (10%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGFVDYYDQRSAA 617 D +T +V+V N+ ++ + L E+F GP E K+IR + FGFV Y +A Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQ 253 Query: 618 LAIMTLHGRHIYGQAIKVNWASASTQR---------------EDTSGHFHIFVGDLSSEV 752 A++ LHG+ I G+ + V A +R + I++ +L + Sbjct: 254 KAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETI 313 Query: 753 NDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQI 932 ND L FS++ S S A+VM + G+ +G+G V F + +EA A+ EM G+ +GS+ + Sbjct: 314 NDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPL 371 Score = 81.3 bits (199), Expect = 1e-14 Identities = 64/291 (21%), Positives = 130/291 (44%), Gaps = 10/291 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVD-YYDQRSAA------LA 623 ++++ N+ ++ L +F G + CK++ + S G+ ++D +AA + Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMN 166 Query: 624 IMTLHGRHIYGQAIKV-NWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCS 800 + L+ R +Y K +A + D + ++FV ++ +++D L F Y Sbjct: 167 GVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTE 226 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQET 980 +V+ D +G+S+G+GFV + + A+ A+ ++ GK + + + A++K E Sbjct: 227 SVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVG-----RAQKKIE- 279 Query: 981 DNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNL 1160 A + + ++ P +Y+ NL +N ++L F + Sbjct: 280 --------------RLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSF 325 Query: 1161 GVGAIEEV--RVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 G + +V V Q KGFG + +S+ EA A+ NG +V KP+ + G Sbjct: 326 GSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376 Score = 34.7 bits (78), Expect = 1.4 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 +YVG+L +V D L++ F G + + G+G++ + +A A+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 1263 NGLVVRGKPIKCSW 1304 N ++ GKP + W Sbjct: 80 NFDLINGKPFRLMW 93
>Q96DU9:PABP5_HUMAN Polyadenylate-binding protein 5 - Homo sapiens (Human)| Length = 382 Score = 94.4 bits (233), Expect = 2e-18 Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 9/283 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMT 632 ++YVG++ P+VTE++L + F+ +GP+ ++ R + +G+V++ A A+ T Sbjct: 19 ALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNT 78 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ ++ W S R SG +IF+ +L +++ L+ FS + + +V Sbjct: 79 MNFDLINGKPFRLMW-SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D+ S+GY +V F + A AI M G L +RQ+ Sbjct: 138 VCDD--NGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV------------------ 177 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 + ++ ++ + FT V+V N+G +++ ++L F G Sbjct: 178 -----------GRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCE--YGP 224 Query: 1173 IEEVRVQQE-----KGFGFIRYSTHGEAALAIQMANGLVVRGK 1286 E V+V ++ KGFGF+RY TH A A+ +G + GK Sbjct: 225 TESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267 Score = 82.0 bits (201), Expect = 8e-15 Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 18/180 (10%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGFVDYYDQRSAA 617 D +T +V+V N+ ++ + L E+F GP E K+IR + FGFV Y +A Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQ 253 Query: 618 LAIMTLHGRHIYGQAIKVNWASASTQR---------------EDTSGHFHIFVGDLSSEV 752 A++ LHG+ I G+ + V A +R + I++ +L + Sbjct: 254 KAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETI 313 Query: 753 NDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQI 932 ND L FS++ S S A+VM + G+ +G+G V F + +EA A+ EM G+ +GS+ + Sbjct: 314 NDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPL 371 Score = 81.3 bits (199), Expect = 1e-14 Identities = 64/291 (21%), Positives = 130/291 (44%), Gaps = 10/291 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVD-YYDQRSAA------LA 623 ++++ N+ ++ L +F G + CK++ + S G+ ++D +AA + Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMN 166 Query: 624 IMTLHGRHIYGQAIKV-NWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCS 800 + L+ R +Y K +A + D + ++FV ++ +++D L F Y Sbjct: 167 GVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTE 226 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQET 980 +V+ D +G+S+G+GFV + + A+ A+ ++ GK + + + A++K E Sbjct: 227 SVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVG-----RAQKKIE- 279 Query: 981 DNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNL 1160 A + + ++ P +Y+ NL +N ++L F + Sbjct: 280 --------------RLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSF 325 Query: 1161 GVGAIEEV--RVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 G + +V V Q KGFG + +S+ EA A+ NG +V KP+ + G Sbjct: 326 GSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376 Score = 34.7 bits (78), Expect = 1.4 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 +YVG+L +V D L++ F G + + G+G++ + +A A+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 1263 NGLVVRGKPIKCSW 1304 N ++ GKP + W Sbjct: 80 NFDLINGKPFRLMW 93
>P60047:PABP5_GORGO Polyadenylate-binding protein 5 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 382 Score = 94.4 bits (233), Expect = 2e-18 Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 9/283 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMT 632 ++YVG++ P+VTE++L + F+ +GP+ ++ R + +G+V++ A A+ T Sbjct: 19 ALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNT 78 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ I G+ ++ W S R SG +IF+ +L +++ L+ FS + + +V Sbjct: 79 MNFDLINGKPFRLMW-SQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKV 137 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + D+ S+GY +V F + A AI M G L +RQ+ Sbjct: 138 VCDD--NGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV------------------ 177 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 + ++ ++ + FT V+V N+G +++ ++L F G Sbjct: 178 -----------GRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCE--YGP 224 Query: 1173 IEEVRVQQE-----KGFGFIRYSTHGEAALAIQMANGLVVRGK 1286 E V+V ++ KGFGF+RY TH A A+ +G + GK Sbjct: 225 TESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267 Score = 82.0 bits (201), Expect = 8e-15 Identities = 54/180 (30%), Positives = 90/180 (50%), Gaps = 18/180 (10%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGFVDYYDQRSAA 617 D +T +V+V N+ ++ + L E+F GP E K+IR + FGFV Y +A Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQ 253 Query: 618 LAIMTLHGRHIYGQAIKVNWASASTQR---------------EDTSGHFHIFVGDLSSEV 752 A++ LHG+ I G+ + V A +R + I++ +L + Sbjct: 254 KAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETI 313 Query: 753 NDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQI 932 ND L FS++ S S A+VM + G+ +G+G V F + +EA A+ EM G+ +GS+ + Sbjct: 314 NDEKLKEEFSSFGSISRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPL 371 Score = 81.3 bits (199), Expect = 1e-14 Identities = 64/291 (21%), Positives = 130/291 (44%), Gaps = 10/291 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVD-YYDQRSAA------LA 623 ++++ N+ ++ L +F G + CK++ + S G+ ++D +AA + Sbjct: 107 NIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMN 166 Query: 624 IMTLHGRHIYGQAIKV-NWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCS 800 + L+ R +Y K +A + D + ++FV ++ +++D L F Y Sbjct: 167 GVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTE 226 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQET 980 +V+ D +G+S+G+GFV + + A+ A+ ++ GK + + + A++K E Sbjct: 227 SVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVG-----RAQKKIE- 279 Query: 981 DNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNL 1160 A + + ++ P +Y+ NL +N ++L F + Sbjct: 280 --------------RLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSF 325 Query: 1161 GVGAIEEV--RVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 G + +V V Q KGFG + +S+ EA A+ NG +V KP+ + G Sbjct: 326 GSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLG 376 Score = 34.7 bits (78), Expect = 1.4 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 +YVG+L +V D L++ F G + + G+G++ + +A A+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 79 Query: 1263 NGLVVRGKPIKCSW 1304 N ++ GKP + W Sbjct: 80 NFDLINGKPFRLMW 93
>Q15427:SF3B4_HUMAN Splicing factor 3B subunit 4 - Homo sapiens (Human)| Length = 424 Score = 94.0 bits (232), Expect = 2e-18 Identities = 55/172 (31%), Positives = 96/172 (55%), Gaps = 5/172 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKL----IRKEKSSFGFVDYYDQRSAALAIMT 632 +VYVG + V+E LL E+F +GPV + + + +GFV++ + A AI Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDA-R 809 ++ +YG+ I+VN ASA + D + IF+G+L E+++ LY FS + + Sbjct: 74 MNMIKLYGKPIRVNKASAHNKNLDVGAN--IFIGNLDPEIDEKLLYDTFSAFGVILQTPK 131 Query: 810 VMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAE 965 +M D TG S+GY F++F + ++ AI M G++L +R I ++A K +++ Sbjct: 132 IMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSK 183 Score = 56.6 bits (135), Expect = 3e-07 Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 6/200 (3%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 ++VG L +V++ L+ F + + D TG+ +GYGFV F ++++A+ AI M Sbjct: 15 VYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIM 74 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 L + IR N A+ N N D G+ Sbjct: 75 NMIKLYGKPIRVNKASAHNK--------------------------NLDVGAN------- 101 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE------KGFGFIRYSTHGEAA 1244 +++GNL E++ L+ F GV ++ ++ ++ KG+ FI +++ + Sbjct: 102 ----IFIGNLDPEIDEKLLYDTFSAFGV-ILQTPKIMRDPDTGNSKGYAFINFASFDASD 156 Query: 1245 LAIQMANGLVVRGKPIKCSW 1304 AI+ NG + +PI S+ Sbjct: 157 AAIEAMNGQYLCNRPITVSY 176 Score = 38.1 bits (87), Expect = 0.13 Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%) Frame = +3 Query: 1071 ENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA---IEEVRVQ-QEKGFGFIRYSTHGE 1238 E N D TVYVG L +V+ L F G + + RV Q +G+GF+ + + + Sbjct: 8 ERNQD-ATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEED 66 Query: 1239 AALAIQMANGLVVRGKPIK 1295 A AI++ N + + GKPI+ Sbjct: 67 ADYAIKIMNMIKLYGKPIR 85
>Q09442:SF3B4_CAEEL Splicing factor 3B subunit 4 - Caenorhabditis elegans| Length = 388 Score = 92.4 bits (228), Expect = 6e-18 Identities = 55/172 (31%), Positives = 97/172 (56%), Gaps = 5/172 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKL----IRKEKSSFGFVDYYDQRSAALAIMT 632 ++YVG + V+E++L E+ +GPV + + FGFV++ + A AI Sbjct: 14 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 73 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDA-R 809 L+ +YG+ IKVN ASA + D +IFVG+L EV++ LY FS + + Sbjct: 74 LNMIKLYGKPIKVNKASAHEKNMDVGA--NIFVGNLDPEVDEKLLYDTFSAFGVILQVPK 131 Query: 810 VMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAE 965 +M D +G S+G+ F++F + + ++TA+ M G++L +R I ++A K +++ Sbjct: 132 IMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKRDSK 183 Score = 37.7 bits (86), Expect = 0.17 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Frame = +3 Query: 1071 ENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGE 1238 E N D T+YVG L +V+ L G V ++ +GFGF+ + + Sbjct: 8 ERNQD-ATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEED 66 Query: 1239 AALAIQMANGLVVRGKPIK 1295 A AI++ N + + GKPIK Sbjct: 67 ADYAIKILNMIKLYGKPIK 85
>O64380:PABP3_ARATH Polyadenylate-binding protein 3 - Arabidopsis thaliana (Mouse-ear| cress) Length = 660 Score = 92.4 bits (228), Expect = 6e-18 Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 6/275 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS---SFGFVDYYDQRSAALAIMTL 635 S+Y G++ P VTE L ++F+ V ++ R + + ++++ + A A+ L Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVM 815 + ++ + I++ ++ SG +IF+ +L + +++ L+ FS++ + +V Sbjct: 110 NYTPLFDRPIRIMLSNRDPSTR-LSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVA 168 Query: 816 WDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNA 995 D TGRS+GYGFV F ++ A+ AI ++ G + +Q+ + Sbjct: 169 MD-VTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIR-------------- 213 Query: 996 VVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAI 1175 Q+ EN P FT VYV NL E+ DEL + F GV + Sbjct: 214 ---------------RQERARDENTP-TPRFTNVYVKNLPKEIGEDELRKTFGKFGVISS 257 Query: 1176 EEVRVQQ---EKGFGFIRYSTHGEAALAIQMANGL 1271 V Q + FGF+ + AA A++ NG+ Sbjct: 258 AVVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGI 292 Score = 82.0 bits (201), Expect = 8e-15 Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 15/297 (5%) Frame = +3 Query: 447 DPSTCRS----VYVGNVHPNVTENLLIEVFQGSGPVERCKL---IRKEKSSFGFVDYYDQ 605 DPST S +++ N+ ++ L E F G + CK+ + +GFV + + Sbjct: 127 DPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKE 186 Query: 606 RSAALAIMTLHGRHIYGQAIKVNW-----ASASTQREDTSGHFHIFVGDLSSEVNDATLY 770 SA AI L+G + + + V A + T +++V +L E+ + L Sbjct: 187 ESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELR 246 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 F + S A VM D ++G SR +GFV+F + A +A+ +M G LG + A Sbjct: 247 KTFGKFGVISSAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQ 305 Query: 951 KTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNR 1130 K + E++ + S A +Y+ NL V+ Sbjct: 306 KKSEREEELRRKFEQERINRFEKSQGA--------------------NLYLKNLDDSVDD 345 Query: 1131 DELHRHFYNLGVGAIEEVRVQQE---KGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 ++L F G +V + + +GFGF+ YS EA A+ NG ++ KP+ Sbjct: 346 EKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPL 402 Score = 48.9 bits (115), Expect = 7e-05 Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 3/201 (1%) Frame = +3 Query: 699 EDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQE 878 + T + ++ GDL +V +A L+ F + RV D RS GY +++F N + Sbjct: 43 DQTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNR-RSLGYAYINFSNPND 101 Query: 879 AETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGS 1058 A A+ + L R IR M +N+D + Sbjct: 102 AYRAMEALNYTPLFDRPIRI-------------------------------MLSNRDPST 130 Query: 1059 KENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQ---QEKGFGFIRYST 1229 + + + N +++ NL ++ L F + G +V + + KG+GF+++ Sbjct: 131 RLSGKGN-----IFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEK 185 Query: 1230 HGEAALAIQMANGLVVRGKPI 1292 A AI NG+++ K + Sbjct: 186 EESAQAAIDKLNGMLMNDKQV 206
>P04147:PABP_YEAST Polyadenylate-binding protein, cytoplasmic and nuclear -| Saccharomyces cerevisiae (Baker's yeast) Length = 577 Score = 92.0 bits (227), Expect = 7e-18 Identities = 67/284 (23%), Positives = 125/284 (44%), Gaps = 8/284 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++ P+V+E L ++F G V ++ R K + +V++ D + AI Sbjct: 39 SLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQ 98 Query: 633 LHGRHIYGQAIKVNWASASTQ-REDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDAR 809 L+ I G+ ++ W+ R+ SG+ IF+ +L ++++ LY FS + ++ Sbjct: 99 LNYTPIKGRLCRIMWSQRDPSLRKKGSGN--IFIKNLHPDIDNKALYDTFSVFGDILSSK 156 Query: 810 VMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNH 989 + D + G+S+G+GFV F + A+ AI + G Sbjct: 157 IATD-ENGKSKGFGFVHFEEEGAAKEAIDALNG--------------------------- 188 Query: 990 NAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG-- 1163 +L NG A ++ + E +T +YV N+ E ++ F G Sbjct: 189 ---MLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPI 245 Query: 1164 -VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 ++E+ + KGFGF+ Y H +A A++ N + G+ + Sbjct: 246 VSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKL 289 Score = 85.1 bits (209), Expect = 9e-16 Identities = 69/287 (24%), Positives = 125/287 (43%), Gaps = 11/287 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTL 635 ++++ N+HP++ L + F G + K+ E FGFV + ++ +A AI L Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186 Query: 636 HGRHIYGQAIKV----NWASASTQREDTSGHF-HIFVGDLSSEVNDATLYACFSTYPSCS 800 +G + GQ I V + +Q E+T H+ +++V +++SE D F+ + Sbjct: 187 NGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIV 246 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQET 980 A + D G+ +G+GFV++ ++A A+ + L ++ A K N Sbjct: 247 SASLEKD-ADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLK 305 Query: 981 DNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNL 1160 + A L ++V NL V+ ++L F Sbjct: 306 KQYEAYRLEKMAKYQGV--------------------NLFVKNLDDSVDDEKLEEEFAPY 345 Query: 1161 G-VGAIEEVRVQ--QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 G + + + +R + + KGFGF+ +ST EA AI N +V GKP+ Sbjct: 346 GTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPL 392 Score = 64.7 bits (156), Expect = 1e-09 Identities = 48/188 (25%), Positives = 85/188 (45%), Gaps = 18/188 (9%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGFVDYYDQRSAALAIMTL 635 ++YV N++ T+ E+F GP+ L + + FGFV+Y A A+ L Sbjct: 220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEAL 279 Query: 636 HGRHIYGQAIKVNWASASTQR-------------EDTSGH--FHIFVGDLSSEVNDATLY 770 + + G+ + V A +R E + + ++FV +L V+D L Sbjct: 280 NDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLE 339 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 F+ Y + + A+VM + G+S+G+GFV F +EA AITE + + + + A Sbjct: 340 EEFAPYGTITSAKVM-RTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398 Query: 951 KTNAEEKQ 974 + + Q Sbjct: 399 RKDVRRSQ 406 Score = 62.4 bits (150), Expect = 6e-09 Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 3/208 (1%) Frame = +3 Query: 678 ASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFV 857 A+ S + + ++VGDL V++A LY FS S S RV D T S GY +V Sbjct: 25 ATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYV 84 Query: 858 SFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAME 1037 +F + + AI ++ + R R W+ + + K+ GS N Sbjct: 85 NFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKK-------------GSGN---- 127 Query: 1038 ANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQ---EKGF 1208 +++ NL +++ L+ F G ++ + KGF Sbjct: 128 -------------------IFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGF 168 Query: 1209 GFIRYSTHGEAALAIQMANGLVVRGKPI 1292 GF+ + G A AI NG+++ G+ I Sbjct: 169 GFVHFEEEGAAKEAIDALNGMLLNGQEI 196
>Q15717:ELAV1_HUMAN ELAV-like protein 1 - Homo sapiens (Human)| Length = 326 Score = 91.3 bits (225), Expect = 1e-17 Identities = 83/309 (26%), Positives = 137/309 (44%), Gaps = 29/309 (9%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMT 632 ++ V + N+T++ L +F G VE KLIR + + +GFV+Y + A AI T Sbjct: 21 NLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 L+G + + IKV++A S++ + ++++ L + + FS + ++RV Sbjct: 81 LNGLRLQSKTIKVSYARPSSEVIKDA---NLYISGLPRTMTQKDVEDMFSRFGRIINSRV 137 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTG-KWLGSRQ-IRCNWATKTNAEEKQETDN 986 + D TG SRG F+ F + EAE AIT G K GS + I +A N N Sbjct: 138 LVDQTTGLSRGVAFIRFDKRSEAEEAITSFNGHKPPGSSEPITVKFAANPN-------QN 190 Query: 987 HNAVVLTN---------GGS----------SNAAMEANQDTGSKENPENNPDFTTVYVGN 1109 N +L+ GG S ++ P N +++ N Sbjct: 191 KNVALLSQLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYN 250 Query: 1110 LGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVV 1277 LG + + L + F G V I + + KGFGF+ + + EAA+AI NG + Sbjct: 251 LGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRL 310 Query: 1278 RGKPIKCSW 1304 K ++ S+ Sbjct: 311 GDKILQVSF 319 Score = 41.6 bits (96), Expect = 0.012 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 6/107 (5%) Frame = +3 Query: 1002 LTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEE 1181 ++NG + A + D G T + V L + +DEL F + +G +E Sbjct: 1 MSNGYEDHMAEDCRGDIGR----------TNLIVNYLPQNMTQDELRSLFSS--IGEVES 48 Query: 1182 VRVQQEK------GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 ++ ++K G+GF+ Y T +A AI NGL ++ K IK S+ Sbjct: 49 AKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSY 95
>P70372:ELAV1_MOUSE ELAV-like protein 1 - Mus musculus (Mouse)| Length = 326 Score = 90.1 bits (222), Expect = 3e-17 Identities = 79/302 (26%), Positives = 136/302 (45%), Gaps = 22/302 (7%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMT 632 ++ V + N+T+ L +F G VE KLIR + + +GFV+Y + A AI T Sbjct: 21 NLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAIST 80 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 L+G + + IKV++A S++ + ++++ L + + FS + ++RV Sbjct: 81 LNGLRLQSKTIKVSYARPSSEVIKDA---NLYISGLPRTMTQKDVEDMFSRFGRIINSRV 137 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTG-KWLGSRQ-IRCNWATKTNAEEKQE--T 980 + D TG SRG F+ F + EAE AIT G K GS + I +A N + + Sbjct: 138 LVDQTTGLSRGVAFIRFDKRSEAEEAITSFIGHKPPGSSEPITVKFAANPNQNKNMALLS 197 Query: 981 DNHNAVVLTNGGS----------SNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNR 1130 +++ GG S ++ P N +++ NLG + + Sbjct: 198 QLYHSPARRFGGPVHHQAQRFRFSPMGVDHMSGISGVNVPGNASSGWCIFIYNLGQDADE 257 Query: 1131 DELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKC 1298 L + F G V I + + KGFGF+ + + E+A+AI NG + K ++ Sbjct: 258 GILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEESAMAIASLNGYRLGDKILQV 317 Query: 1299 SW 1304 S+ Sbjct: 318 SF 319 Score = 38.9 bits (89), Expect = 0.075 Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 6/78 (7%) Frame = +3 Query: 1089 TTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEK------GFGFIRYSTHGEAALA 1250 T + V L + ++EL F + +G +E ++ ++K G+GF+ Y T +A A Sbjct: 20 TNLIVNYLPQNMTQEELRSLFSS--IGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERA 77 Query: 1251 IQMANGLVVRGKPIKCSW 1304 I NGL ++ K IK S+ Sbjct: 78 ISTLNGLRLQSKTIKVSY 95
>Q60899:ELAV2_MOUSE ELAV-like protein 2 - Mus musculus (Mouse)| Length = 360 Score = 89.4 bits (220), Expect = 5e-17 Identities = 88/333 (26%), Positives = 144/333 (43%), Gaps = 36/333 (10%) Frame = +3 Query: 414 PVSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK----EKSSF 581 PV +GN D T ++ V + N+T+ L +F G +E CKL+R + + Sbjct: 28 PVDSGNTE---DSKT--NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82 Query: 582 GFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDA 761 GFV+Y D + A AI TL+G + + IKV++A S+ + +++V L + Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQK 139 Query: 762 TLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTG-KWLGSRQ--- 929 L FS Y +R++ D TG SRG GF+ F + EAE AI + G K G+ + Sbjct: 140 ELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPIT 199 Query: 930 --IRCNWATKTN-------------------AEEKQETDNHNAVVLTNGGSSN---AAME 1037 N + KTN A++ Q N + + G S ++ Sbjct: 200 VKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRFSPMTID 259 Query: 1038 ANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKG 1205 P + ++V NL + + L + F G V I + + KG Sbjct: 260 GMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKG 319 Query: 1206 FGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 FGF+ + + EAA+AI NG + + ++ S+ Sbjct: 320 FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 352 Score = 38.9 bits (89), Expect = 0.075 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Frame = +3 Query: 1005 TNGGSSNAAMEANQDTGSKENPENNPDF-TTVYVGNLGHEVNRDELHRHFYNLGVGAIEE 1181 T ++N N + S + N D T + V L + ++EL F + +G IE Sbjct: 10 TCNNTANGPTTVNNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGS--IGEIES 67 Query: 1182 VRVQQEK------GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 ++ ++K G+GF+ Y +A AI NGL ++ K IK S+ Sbjct: 68 CKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 114
>Q5R9Z6:ELAV2_PONPY ELAV-like protein 2 - Pongo pygmaeus (Orangutan)| Length = 359 Score = 89.0 bits (219), Expect = 6e-17 Identities = 88/332 (26%), Positives = 144/332 (43%), Gaps = 35/332 (10%) Frame = +3 Query: 414 PVSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK----EKSSF 581 PV +GN D T ++ V + N+T+ L +F G +E CKL+R + + Sbjct: 28 PVDSGNTE---DSKT--NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82 Query: 582 GFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDA 761 GFV+Y D + A AI TL+G + + IKV++A S+ + +++V L + Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQK 139 Query: 762 TLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTG-KWLGSRQ--- 929 L FS Y +R++ D TG SRG GF+ F + EAE AI + G K G+ + Sbjct: 140 ELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPIT 199 Query: 930 --IRCNWATKTN-------------------AEEKQETDNHNAVVLTNGGS--SNAAMEA 1040 N + KTN A++ Q N + + G S ++ Sbjct: 200 VKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDG 259 Query: 1041 NQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGF 1208 P + ++V NL + + L + F G V I + + KGF Sbjct: 260 MTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGF 319 Query: 1209 GFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 GF+ + + EAA+AI NG + + ++ S+ Sbjct: 320 GFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 351 Score = 38.5 bits (88), Expect = 0.098 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Frame = +3 Query: 1005 TNGGSSNAAMEANQDTGSKENPENNPDF-TTVYVGNLGHEVNRDELHRHFYNLGVGAIEE 1181 T ++N N + S + N D T + V L + ++EL F + +G IE Sbjct: 10 TCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGS--IGEIES 67 Query: 1182 VRVQQEK------GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 ++ ++K G+GF+ Y +A AI NGL ++ K IK S+ Sbjct: 68 CKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 114
>Q12926:ELAV2_HUMAN ELAV-like protein 2 - Homo sapiens (Human)| Length = 359 Score = 89.0 bits (219), Expect = 6e-17 Identities = 88/332 (26%), Positives = 144/332 (43%), Gaps = 35/332 (10%) Frame = +3 Query: 414 PVSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK----EKSSF 581 PV +GN D T ++ V + N+T+ L +F G +E CKL+R + + Sbjct: 28 PVDSGNTE---DSKT--NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGY 82 Query: 582 GFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDA 761 GFV+Y D + A AI TL+G + + IKV++A S+ + +++V L + Sbjct: 83 GFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQK 139 Query: 762 TLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTG-KWLGSRQ--- 929 L FS Y +R++ D TG SRG GF+ F + EAE AI + G K G+ + Sbjct: 140 ELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPIT 199 Query: 930 --IRCNWATKTN-------------------AEEKQETDNHNAVVLTNGGS--SNAAMEA 1040 N + KTN A++ Q N + + G S ++ Sbjct: 200 VKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTIDG 259 Query: 1041 NQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGF 1208 P + ++V NL + + L + F G V I + + KGF Sbjct: 260 MTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKGF 319 Query: 1209 GFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 GF+ + + EAA+AI NG + + ++ S+ Sbjct: 320 GFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 351 Score = 38.5 bits (88), Expect = 0.098 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Frame = +3 Query: 1005 TNGGSSNAAMEANQDTGSKENPENNPDF-TTVYVGNLGHEVNRDELHRHFYNLGVGAIEE 1181 T ++N N + S + N D T + V L + ++EL F + +G IE Sbjct: 10 TCNNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGS--IGEIES 67 Query: 1182 VRVQQEK------GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 ++ ++K G+GF+ Y +A AI NGL ++ K IK S+ Sbjct: 68 CKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 114
>P21187:PABP_DROME Polyadenylate-binding protein - Drosophila melanogaster (Fruit fly)| Length = 634 Score = 88.2 bits (217), Expect = 1e-16 Identities = 73/297 (24%), Positives = 127/297 (42%), Gaps = 15/297 (5%) Frame = +3 Query: 447 DPSTCRS----VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQ 605 DPS RS V++ N+ + + + F G + CK+ EK + +GFV + + Sbjct: 81 DPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETE 140 Query: 606 RSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGH-----FHIFVGDLSSEVNDATLY 770 +A +I ++G + G+ + V +RE G +++V + + + +D L Sbjct: 141 EAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLK 200 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 F Y + +VM + G+S+G+GFV+F + AE A+ + GK +G + Sbjct: 201 EFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARA 259 Query: 951 KTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNR 1130 + AE +QE + K+ + +YV NL ++ Sbjct: 260 QKKAERQQELKRKFEEL-------------------KQKRHESVFGVNLYVKNLDDTIDD 300 Query: 1131 DELHRHFYNLGVGAIEEVRVQQE---KGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 D L F G +V +E KGFGF+ ++ EA A+ NG VV KP+ Sbjct: 301 DRLRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPL 357 Score = 87.8 bits (216), Expect = 1e-16 Identities = 67/275 (24%), Positives = 124/275 (45%), Gaps = 7/275 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMT 632 S+YVG++ +V E+ L + F +GPV ++ R + + +V++ A A+ T Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 ++ + + I++ W+ SG ++F+ +L +++ +Y FS + + +V Sbjct: 63 MNFDLVRNKPIRIMWSQRDPSLR-RSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKV 121 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 D K G S+GYGFV F ++ A T+I ++ G L +++ + K +++E Sbjct: 122 ATDEK-GNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKV---YVGKFIPRKERE----- 172 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 KE E FT VYV N + + ++L F G Sbjct: 173 ----------------------KELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKIT 210 Query: 1173 IEEVRVQQE---KGFGFIRYSTHGEAALAIQMANG 1268 +V +++ KGFGF+ + T A A+Q NG Sbjct: 211 SYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNG 245 Score = 74.3 bits (181), Expect = 2e-12 Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 19/196 (9%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKE---KSSFGFVDYYDQRSAALAIMTL 635 +VYV N + + L E F+ G + K++ KE FGFV + +A A+ L Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQAL 243 Query: 636 HGRHI----------------YGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATL 767 +G+ + Q +K + +R ++ +++V +L ++D L Sbjct: 244 NGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRL 303 Query: 768 YACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 FS Y + + A+VM D + GRS+G+GFV F EA A+TE+ G+ +GS+ + Sbjct: 304 RIAFSPYGNITSAKVMTDEE-GRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYV--- 359 Query: 948 TKTNAEEKQETDNHNA 995 A+ K+E H A Sbjct: 360 --ALAQRKEERKAHLA 373 Score = 38.5 bits (88), Expect = 0.098 Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQM 1259 ++YVG+L +VN L F + G + +V ++ G+ ++ + +A A+ Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62 Query: 1260 ANGLVVRGKPIKCSW 1304 N +VR KPI+ W Sbjct: 63 MNFDLVRNKPIRIMW 77
>Q8CH84:ELAV2_RAT ELAV-like protein 2 - Rattus norvegicus (Rat)| Length = 359 Score = 87.4 bits (215), Expect = 2e-16 Identities = 87/333 (26%), Positives = 143/333 (42%), Gaps = 36/333 (10%) Frame = +3 Query: 414 PVSNGNLPPGFDPSTCRSVYVGNVHP-NVTENLLIEVFQGSGPVERCKLIRK----EKSS 578 PV +GN ++ + N P N+T+ L +F G +E CKL+R + Sbjct: 28 PVDSGNTEDS------KTNLIDNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLG 81 Query: 579 FGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVND 758 +GFV+Y D + A AI TL+G + + IKV++A S+ + +++V L + Sbjct: 82 YGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQ 138 Query: 759 ATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTG-KWLGSRQ-- 929 L FS Y +R++ D TG SRG GF+ F + EAE AI + G K G+ + Sbjct: 139 KELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQKPPGATEPI 198 Query: 930 ---IRCNWATKTN-------------------AEEKQETDNHNAVVLTNGGS--SNAAME 1037 N + KTN A++ Q N + + G S ++ Sbjct: 199 TVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKRFSPMTID 258 Query: 1038 ANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKG 1205 P + ++V NL + + L + F G V I + + KG Sbjct: 259 GMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKG 318 Query: 1206 FGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 FGF+ + + EAA+AI NG + + ++ S+ Sbjct: 319 FGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSF 351 Score = 39.3 bits (90), Expect = 0.058 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Frame = +3 Query: 1005 TNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGN-LGHEVNRDELHRHFYNLGVGAIEE 1181 T ++N N + S + N D T + N L + ++EL F + +G IE Sbjct: 10 TCNNTANGPTTVNNNCSSPVDSGNTEDSKTNLIDNYLPQNMTQEELKSLFGS--IGEIES 67 Query: 1182 VRVQQEK------GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 ++ ++K G+GF+ Y +A AI NGL ++ K IK S+ Sbjct: 68 CKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 114
>P27476:NSR1_YEAST Nuclear localization sequence-binding protein - Saccharomyces| cerevisiae (Baker's yeast) Length = 414 Score = 86.7 bits (213), Expect = 3e-16 Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 6/212 (2%) Frame = +3 Query: 693 QREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQ 872 + E+T IFVG LS ++D L F ARV+++ T RSRGYG+V F N+ Sbjct: 160 KNEETEEPATIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENK 219 Query: 873 QEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDT 1052 AE AI EM GK + R I C+ +T A N D Sbjct: 220 SYAEKAIQEMQGKEIDGRPINCDMSTSKPA-------------------------GNNDR 254 Query: 1053 GSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRV------QQEKGFGF 1214 K + T+++GNL +RD + F G + VR+ +Q KGFG+ Sbjct: 255 AKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFAK--HGEVVSVRIPTHPETEQPKGFGY 312 Query: 1215 IRYSTHGEAALAIQMANGLVVRGKPIKCSWGN 1310 +++S +A A+ G + +P++ + + Sbjct: 313 VQFSNMEDAKKALDALQGEYIDNRPVRLDFSS 344 Score = 59.7 bits (143), Expect = 4e-08 Identities = 37/176 (21%), Positives = 89/176 (50%), Gaps = 14/176 (7%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMT 632 +++VG + ++ + L + F+ G V ++I + + +G+VD+ ++ A AI Sbjct: 169 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 228 Query: 633 LHGRHIYGQAIKVNWA-SASTQREDTSGHF---------HIFVGDLSSEVNDATLYACFS 782 + G+ I G+ I + + S D + F +F+G+LS + ++ F+ Sbjct: 229 MQGKEIDGRPINCDMSTSKPAGNNDRAKKFGDTPSEPSDTLFLGNLSFNADRDAIFELFA 288 Query: 783 TYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 + R+ +T + +G+G+V F N ++A+ A+ + G+++ +R +R ++++ Sbjct: 289 KHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKALDALQGEYIDNRPVRLDFSS 344
>O14102:SAP49_SCHPO Spliceosome-associated protein 49 - Schizosaccharomyces pombe| (Fission yeast) Length = 335 Score = 84.7 bits (208), Expect = 1e-15 Identities = 51/177 (28%), Positives = 94/177 (53%), Gaps = 4/177 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKL----IRKEKSSFGFVDYYDQRSAALAIMT 632 ++Y+GN+ VT+++L E+ +GPV + +R + FGF ++ ++ A Sbjct: 12 TIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQDVEYACQI 71 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 L+ ++G+ I+VN AS G ++FVG+L V++ LY FS A Sbjct: 72 LNQVKLFGKPIRVNRASQDRGVNTLIGA-NLFVGNLDPLVDERVLYDTFSALGQLVKAPQ 130 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETD 983 + ++ GRS+GYGFVS+ + + A+ AI M ++L ++ I ++A K + ++ D Sbjct: 131 VARDENGRSKGYGFVSYDSFETADAAIEAMNNQFLMNKPITVSYAFKREGKGERHGD 187 Score = 48.5 bits (114), Expect = 1e-04 Identities = 51/207 (24%), Positives = 80/207 (38%), Gaps = 4/207 (1%) Frame = +3 Query: 696 REDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQ 875 RED + I++G+L +V D+ L+ + + D G+GF F ++Q Sbjct: 4 REDRNQDATIYLGNLDEKVTDSILFELCLQAGPVVNIHIPRDRVRNSHNGFGFCEFLHEQ 63 Query: 876 EAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTG 1055 + E A + L + IR N A+QD G Sbjct: 64 DVEYACQILNQVKLFGKPIRVN-------------------------------RASQDRG 92 Query: 1056 SKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG--VGAIEEVRVQ--QEKGFGFIRY 1223 N ++VGNL V+ L+ F LG V A + R + + KG+GF+ Y Sbjct: 93 V-----NTLIGANLFVGNLDPLVDERVLYDTFSALGQLVKAPQVARDENGRSKGYGFVSY 147 Query: 1224 STHGEAALAIQMANGLVVRGKPIKCSW 1304 + A AI+ N + KPI S+ Sbjct: 148 DSFETADAAIEAMNNQFLMNKPITVSY 174
>P19682:ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 276 Score = 83.2 bits (204), Expect = 3e-15 Identities = 53/176 (30%), Positives = 91/176 (51%), Gaps = 9/176 (5%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSA 614 +PS ++VGN+ ++ L ++FQ +G VE ++I ++ FGFV A Sbjct: 92 EPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEA 151 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGH-----FHIFVGDLSSEVNDATLYACF 779 A+ + G+ + VN A+ R + + + I+VG++ +++DA L F Sbjct: 152 DKAVELYSQYDLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVF 211 Query: 780 STYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 S + ARV++D ++GRSRG+GFV+ ++ E AI + G+ L R IR N A Sbjct: 212 SEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAA 267 Score = 53.1 bits (126), Expect = 4e-06 Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 4/213 (1%) Frame = +3 Query: 669 VNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGY 848 V A + + ++ S +FVG+L +++ L F A V+++ +T RSRG+ Sbjct: 81 VGEAGETEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGF 140 Query: 849 GFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNA 1028 GFV+ +EA+ A+ + L R + N A Sbjct: 141 GFVTMSTVEEADKAVELYSQYDLNGRLLTVNKA--------------------------- 173 Query: 1029 AMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE--- 1199 A + + + P +YVGN+ +++ L + F G V +E Sbjct: 174 ---APRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGR 230 Query: 1200 -KGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 +GFGF+ S+ E + AI +G + G+ I+ Sbjct: 231 SRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIR 263 Score = 39.3 bits (90), Expect = 0.058 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%) Frame = +3 Query: 435 PPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYD 602 P F P+ +YVGN+ ++ + L +VF G V +++ +S FGFV Sbjct: 184 PRTFQPTY--RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSS 241 Query: 603 QRSAALAIMTLHGRHIYGQAIKVNWASASTQR 698 + + AI L G+ + G+ I+VN A +R Sbjct: 242 EAEMSEAIANLDGQTLDGRTIRVNAAEERPRR 273
>Q04836:ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 329 Score = 82.8 bits (203), Expect = 5e-15 Identities = 54/176 (30%), Positives = 91/176 (51%), Gaps = 9/176 (5%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSA 614 +PS ++VGN+ +V L +F+ +G VE ++I ++ FGFV A Sbjct: 145 EPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEA 204 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGH-----FHIFVGDLSSEVNDATLYACF 779 A+ + + G+ + VN A+ R + + F ++VG+L +V++ L F Sbjct: 205 ETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLF 264 Query: 780 STYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 S + +ARV++D +TGRSRG+GFV+ + E AI+ + G+ L R IR N A Sbjct: 265 SEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVA 320 Score = 58.2 bits (139), Expect = 1e-07 Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 6/197 (3%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG+L+ +VN L F + A V+++ +T +SRG+GFV+ + EAETA+ + Sbjct: 152 LFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKF 211 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 L R + N A + ++ + P Sbjct: 212 NRYDLNGRLLTVNKAAPRGSRPERAPRVYE-----------------------------P 242 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEK------GFGFIRYSTHGEAA 1244 F VYVGNL +V+ L + F G + E RV ++ GFGF+ S E Sbjct: 243 AFR-VYVGNLPWDVDNGRLEQLFSEHG--KVVEARVVYDRETGRSRGFGFVTMSDVDELN 299 Query: 1245 LAIQMANGLVVRGKPIK 1295 AI +G + G+ I+ Sbjct: 300 EAISALDGQNLEGRAIR 316 Score = 40.8 bits (94), Expect = 0.020 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 4/99 (4%) Frame = +3 Query: 1002 LTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEE 1181 ++ G S + + E PE + + ++VGNL ++VN L F G I E Sbjct: 122 VSEGDESEGDVSEGAVSERAEFPEPSEE-AKLFVGNLAYDVNSQALAMLFEQAGTVEIAE 180 Query: 1182 V----RVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGK 1286 V Q +GFGF+ S+ EA A++ N + G+ Sbjct: 181 VIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGR 219 Score = 38.9 bits (89), Expect = 0.075 Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMTL 635 VYVGN+ +V L ++F G V +++ ++ FGFV D AI L Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305 Query: 636 HGRHIYGQAIKVNWASASTQR 698 G+++ G+AI+VN A R Sbjct: 306 DGQNLEGRAIRVNVAEERPPR 326
>Q9ZQA8:PABPX_ARATH Probable polyadenylate-binding protein At2g36660 - Arabidopsis| thaliana (Mouse-ear cress) Length = 609 Score = 82.4 bits (202), Expect = 6e-15 Identities = 70/283 (24%), Positives = 126/283 (44%), Gaps = 7/283 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTL 635 +V+V N+ +VT +L ++F+ G + CK+ E +GFV + + +A AI TL Sbjct: 113 NVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTL 172 Query: 636 HGRHIYGQAIKVNWASASTQR-EDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 + + + I V T R + + ++++ +L ++V++ L F+ + + Sbjct: 173 NSTIVADKEIYVGKFMKKTDRVKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAI 232 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 D RGY FV+F N ++A A + G GS+ + A K AE +Q Sbjct: 233 AKDENR-LCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQK-KAEREQ------ 284 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA 1172 + Q E + + +YV N+ V +EL +HF G Sbjct: 285 -------------LLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTIT 331 Query: 1173 IEEVRVQQE---KGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 ++ ++ KGFGF+ +ST EA A++ +G + GKP+ Sbjct: 332 STKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPL 374 Score = 75.9 bits (185), Expect = 6e-13 Identities = 65/275 (23%), Positives = 112/275 (40%), Gaps = 7/275 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMT 632 S+YVG++HP+VTE +L + F + +L + S +G+ ++ ++ A LAI Sbjct: 25 SLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEK 84 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 + + G+ I+V W S +G ++FV +L V +A L F + + +V Sbjct: 85 KNNSLLNGKMIRVMW-SVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKV 143 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHN 992 + G+SRGYGFV F + A AI + + ++I K K E Sbjct: 144 A-TLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDRVKPE----- 197 Query: 993 AVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG--- 1163 +T +Y+ NL +V+ D L F G Sbjct: 198 -----------------------------EKYTNLYMKNLDADVSEDLLREKFAEFGKIV 228 Query: 1164 VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANG 1268 AI + + +G+ F+ + +A A + NG Sbjct: 229 SLAIAKDENRLCRGYAFVNFDNPEDARRAAETVNG 263 Score = 63.9 bits (154), Expect = 2e-09 Identities = 47/208 (22%), Positives = 81/208 (38%), Gaps = 3/208 (1%) Frame = +3 Query: 678 ASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFV 857 A AS+ + ++VGDL V + LY F+ + S + R+ D +GRS YG+ Sbjct: 11 ADASSSGSSSPVTASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYA 70 Query: 858 SFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAME 1037 +F ++Q+A AI + L + IR W+ + + N Sbjct: 71 NFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGN----------------- 113 Query: 1038 ANQDTGSKENPENNPDFTTVYVGNLGHEVNR---DELHRHFYNLGVGAIEEVRVQQEKGF 1208 V+V NL V ++ + F N+ + + + +G+ Sbjct: 114 -------------------VFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGY 154 Query: 1209 GFIRYSTHGEAALAIQMANGLVVRGKPI 1292 GF+++ A AIQ N +V K I Sbjct: 155 GFVQFEQEDAAHAAIQTLNSTIVADKEI 182 Score = 51.6 bits (122), Expect = 1e-05 Identities = 47/208 (22%), Positives = 88/208 (42%), Gaps = 18/208 (8%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS---SFGFVDYYDQRSAALAIMTL 635 ++Y+ N+ +V+E+LL E F G + + + E + FV++ + A A T+ Sbjct: 202 NLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETV 261 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGH---------------FHIFVGDLSSEVNDATLY 770 +G + + V A +RE +I+V +++ V + L Sbjct: 262 NGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELR 321 Query: 771 ACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 FS + + ++M D K G+S+G+GFV F +EA A+ G+ + + A Sbjct: 322 KHFSQCGTITSTKLMCDEK-GKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQ 380 Query: 951 KTNAEEKQETDNHNAVVLTNGGSSNAAM 1034 K + Q V SS+A++ Sbjct: 381 KKEDRKMQLQVQFGNRVEARKSSSSASV 408
>P19683:ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 315 Score = 80.9 bits (198), Expect = 2e-14 Identities = 53/176 (30%), Positives = 88/176 (50%), Gaps = 9/176 (5%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK----EKSSFGFVDYYDQRSA 614 +P ++VGN+ +V L +F+ +G VE ++I + FGFV A Sbjct: 131 EPPEDAKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEA 190 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGH-----FHIFVGDLSSEVNDATLYACF 779 A+ + + G+ + VN A+ +R + + I+VG++ ++DA L F Sbjct: 191 EKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLF 250 Query: 780 STYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 S + ARV++D +TGRSRG+GFV+ ++ E AI + G+ L R IR N A Sbjct: 251 SEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVA 306 Score = 52.0 bits (123), Expect = 9e-06 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 4/109 (3%) Frame = +3 Query: 972 QETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHF 1151 +ET+ V + +EA+++ + P P+ ++VGNL ++V+ + L R F Sbjct: 100 EETEEEGFVEAVGDAGESDEVEADEEEEEFQEP---PEDAKLFVGNLPYDVDSEGLARLF 156 Query: 1152 YNLGVGAIEEV----RVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGK 1286 GV I EV Q +GFGF+ ST EA A++M N V G+ Sbjct: 157 EQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEMYNRYDVNGR 205 Score = 47.0 bits (110), Expect = 3e-04 Identities = 49/199 (24%), Positives = 81/199 (40%), Gaps = 8/199 (4%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG+L +V+ L F A V+++ T +SRG+GFV+ +EAE A+ EM Sbjct: 138 LFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAV-EM 196 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 ++ + N +LT N+ E PE P Sbjct: 197 YNRY-----------------------DVNGRLLT----------VNKAARRGERPERPP 223 Query: 1083 ----DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGE 1238 +YVGN+ ++ L + F G V +E +GFGF+ ++ E Sbjct: 224 RTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAE 283 Query: 1239 AALAIQMANGLVVRGKPIK 1295 + AI +G + G+ I+ Sbjct: 284 MSDAIANLDGQSLDGRTIR 302 Score = 37.0 bits (84), Expect = 0.29 Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMTL 635 +YVGN+ + + L ++F G V +++ ++ FGFV + + AI L Sbjct: 232 IYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANL 291 Query: 636 HGRHIYGQAIKVNWASASTQR 698 G+ + G+ I+VN A ++R Sbjct: 292 DGQSLDGRTIRVNVAEDRSRR 312
>P28644:ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast - Spinacia oleracea (Spinach)| Length = 233 Score = 80.9 bits (198), Expect = 2e-14 Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 9/176 (5%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSA 614 +P ++VGN+ +V L +F +G VE ++I ++ FGFV A Sbjct: 50 EPPEEAKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEA 109 Query: 615 ALAIMTLHGRHIYGQAIKVNWASAS-----TQREDTSGHFHIFVGDLSSEVNDATLYACF 779 A+ L+G + G+ + VN A+ R D ++VG+L +V+ + L F Sbjct: 110 EKAVELLNGYDMDGRQLTVNKAAPRGSPERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLF 169 Query: 780 STYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 S + ARV+ D +TGRSRG+GFV+ ++ E AI + G+ L R +R N A Sbjct: 170 SEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVA 225 Score = 61.6 bits (148), Expect = 1e-08 Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 4/195 (2%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG+L +V+ L F A V+++ +T RSRG+GFV+ +EAE A+ + Sbjct: 57 LFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELL 116 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 G + RQ+ N A GS A + + + Sbjct: 117 NGYDMDGRQLTVNKAAPR-------------------GSPERAPRGDFEPSCR------- 150 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALA 1250 VYVGNL +V+ L + F G + + + +GFGF+ S+ E A Sbjct: 151 ----VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDA 206 Query: 1251 IQMANGLVVRGKPIK 1295 I +G + G+ ++ Sbjct: 207 IAALDGQTLDGRAVR 221 Score = 47.4 bits (111), Expect = 2e-04 Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 4/117 (3%) Frame = +3 Query: 954 TNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRD 1133 TNA + E+D AV + G + + E + G + P+ ++VGNL ++V+ + Sbjct: 14 TNAVLEGESDPEGAV--SWGSETQVSDEGGVEGG--QGFSEPPEEAKLFVGNLPYDVDSE 69 Query: 1134 ELHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 +L F GV I EV +E +GFGF+ ST EA A+++ NG + G+ + Sbjct: 70 KLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQL 126 Score = 40.8 bits (94), Expect = 0.020 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%) Frame = +3 Query: 444 FDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRS 611 F+PS CR VYVGN+ +V + L ++F G V +++ ++ FGFV + Sbjct: 145 FEPS-CR-VYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESE 202 Query: 612 AALAIMTLHGRHIYGQAIKVNWASASTQR 698 AI L G+ + G+A++VN A +R Sbjct: 203 VNDAIAALDGQTLDGRAVRVNVAEERPRR 231
>Q60900:ELAV3_MOUSE ELAV-like protein 3 - Mus musculus (Mouse)| Length = 367 Score = 80.5 bits (197), Expect = 2e-14 Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 43/311 (13%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK----EKSSFGFVDYYDQRSAALAIMT 632 ++ V + N+T++ +F G +E CKL+R + +GFV+Y D A AI T Sbjct: 40 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 99 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 L+G + + IKV++A S+ + +++V L ++ + FS Y +R+ Sbjct: 100 LNGLKLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMSQKEMEQLFSQYGRIITSRI 156 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTG-KWLGSRQ-IRCNWATKTNAEEKQETDN 986 + D TG SRG GF+ F + EAE AI + G K LG+ + I +A + + Q Sbjct: 157 LLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLT 216 Query: 987 H-----------------------NAVVLTNGGSSNAAMEANQDTGSKENPENNPDF--- 1088 H N + + G S ++ A + + Sbjct: 217 HLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKSPLSLIARFSPIAIDGMSGLAGVGLS 276 Query: 1089 -------TTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHG 1235 ++V NL E + L + F G V I + + KGFGF+ + + Sbjct: 277 GGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYD 336 Query: 1236 EAALAIQMANG 1268 EAA+AI NG Sbjct: 337 EAAMAIASLNG 347 Score = 38.9 bits (89), Expect = 0.075 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 6/104 (5%) Frame = +3 Query: 1011 GGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRV 1190 GG + A+ G+ N + T + V L + +DE F + +G IE ++ Sbjct: 15 GGPAGPALPNGPLLGT--NGATDDSKTNLIVNYLPQNMTQDEFKSLFGS--IGDIESCKL 70 Query: 1191 QQEK------GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 ++K G+GF+ YS +A AI NGL ++ K IK S+ Sbjct: 71 VRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSY 114
>Q14576:ELAV3_HUMAN ELAV-like protein 3 - Homo sapiens (Human)| Length = 367 Score = 79.7 bits (195), Expect = 4e-14 Identities = 79/311 (25%), Positives = 131/311 (42%), Gaps = 43/311 (13%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK----EKSSFGFVDYYDQRSAALAIMT 632 ++ V + N+T++ +F G +E CKL+R + +GFV+Y D A AI T Sbjct: 40 NLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINT 99 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 L+G + + IKV++A S+ + +++V L ++ + FS Y +R+ Sbjct: 100 LNGLKLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMSQKEMEQLFSQYGRIITSRI 156 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTG-KWLGSRQ-IRCNWATKTNAEEKQETDN 986 + D TG SRG GF+ F + EAE AI + G K LG+ + I +A + + Q Sbjct: 157 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLT 216 Query: 987 H-----------------------NAVVLTNGGSSNAAMEANQDTGSKENPENNPDF--- 1088 H N + + G S ++ A + + Sbjct: 217 HLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKSPLSLIARFSPIAIDGMSGLAGVGLS 276 Query: 1089 -------TTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHG 1235 ++V NL E + L + F G V I + + KGFGF+ + + Sbjct: 277 GGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYD 336 Query: 1236 EAALAIQMANG 1268 EAA+AI NG Sbjct: 337 EAAMAIASLNG 347 Score = 38.9 bits (89), Expect = 0.075 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 6/104 (5%) Frame = +3 Query: 1011 GGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRV 1190 GG + A+ G+ N + T + V L + +DE F + +G IE ++ Sbjct: 15 GGPAGPALPNGPLLGT--NGATDDSKTNLIVNYLPQNMTQDEFKSLFGS--IGDIESCKL 70 Query: 1191 QQEK------GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 ++K G+GF+ YS +A AI NGL ++ K IK S+ Sbjct: 71 VRDKITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSY 114
>Q9ZUU4:ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 289 Score = 79.3 bits (194), Expect = 5e-14 Identities = 56/188 (29%), Positives = 91/188 (48%), Gaps = 28/188 (14%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKE----KSSFGFVDYYDQRSAALAIMTL 635 ++VGN+ NV L ++F+ +G VE ++I + FGFV A Sbjct: 93 LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQF 152 Query: 636 HGRHIYGQAIKVNWASASTQRED-----------TSGHFH-------------IFVGDLS 743 +G + G+ ++VN +RED +SG + ++VG+LS Sbjct: 153 NGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLS 212 Query: 744 SEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGS 923 V+D L + FS +ARV++D +GRS+G+GFV++ + QE + AI + G L Sbjct: 213 WGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDG 272 Query: 924 RQIRCNWA 947 RQIR + A Sbjct: 273 RQIRVSEA 280 Score = 73.6 bits (179), Expect = 3e-12 Identities = 60/212 (28%), Positives = 91/212 (42%), Gaps = 6/212 (2%) Frame = +3 Query: 684 ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSF 863 A + + S +FVG+L V+ A L F + + V++D TGRSRG+GFV+ Sbjct: 80 APPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTM 139 Query: 864 RNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEAN 1043 + E E A + G L R +R N + D + ++ GSS + Sbjct: 140 SSVSEVEAAAQQFNGYELDGRPLRVN----AGPPPPKREDGFSRGPRSSFGSSGSGYGGG 195 Query: 1044 QDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRV------QQEKG 1205 +G+ VYVGNL V+ L F G + E RV + KG Sbjct: 196 GGSGAGSG-------NRVYVGNLSWGVDDMALESLFSE--QGKVVEARVIYDRDSGRSKG 246 Query: 1206 FGFIRYSTHGEAALAIQMANGLVVRGKPIKCS 1301 FGF+ Y + E AI+ +G + G+ I+ S Sbjct: 247 FGFVTYDSSQEVQNAIKSLDGADLDGRQIRVS 278 Score = 39.3 bits (90), Expect = 0.058 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 7/98 (7%) Frame = +3 Query: 1035 EANQDTGSKENPENNPDFTT---VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQ 1193 E +D + P F+ ++VGNL V+ +L + F + G V I + Sbjct: 70 EVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITG 129 Query: 1194 QEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 + +GFGF+ S+ E A Q NG + G+P++ + G Sbjct: 130 RSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAG 167
>Q08935:ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 273 Score = 79.0 bits (193), Expect = 7e-14 Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 16/172 (9%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMTL 635 ++VGN+ + L E+F+ +G VE ++I + + FGFV + A Sbjct: 89 IFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 636 HGRHIYGQAIKVNWASASTQREDTS--------GHF----HIFVGDLSSEVNDATLYACF 779 +G + G+A++VN +RE++S G F ++VG+L+ V+ L F Sbjct: 149 NGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLF 208 Query: 780 STYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIR 935 S DA+V++D +GRSRG+GFV++ + +E AI + G L R IR Sbjct: 209 SEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIR 260 Score = 75.5 bits (184), Expect = 7e-13 Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 4/207 (1%) Frame = +3 Query: 693 QREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQ 872 + + S IFVG+L + A L F + V++D TGRSRG+GFV+ ++ Sbjct: 79 EERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSK 138 Query: 873 QEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDT 1052 +E E A + G L R +R N EK+E + GGS Sbjct: 139 EEVEAACQQFNGYELDGRALRVN---SGPPPEKRENSSF------RGGSRGG-------- 181 Query: 1053 GSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE----KGFGFIR 1220 GS ++ VYVGNL V++D L F G +V ++ +GFGF+ Sbjct: 182 GSFDSSNR------VYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVT 235 Query: 1221 YSTHGEAALAIQMANGLVVRGKPIKCS 1301 YS+ E AI+ +G+ + G+ I+ S Sbjct: 236 YSSAEEVNNAIESLDGVDLNGRAIRVS 262 Score = 37.4 bits (85), Expect = 0.22 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%) Frame = +3 Query: 1047 DTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGF 1214 D G +E +PD ++VGNL + L F G V I + + +GFGF Sbjct: 74 DDGVEEERNFSPDLK-IFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGF 132 Query: 1215 IRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 + S+ E A Q NG + G+ ++ + G Sbjct: 133 VTMSSKEEVEAACQQFNGYELDGRALRVNSG 163
>O09032:ELAV4_RAT ELAV-like protein 4 - Rattus norvegicus (Rat)| Length = 373 Score = 78.2 bits (191), Expect = 1e-13 Identities = 84/329 (25%), Positives = 135/329 (41%), Gaps = 49/329 (14%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK----EKSSFGFVDYYDQRSAALAIMT 632 ++ V + N+T+ +F G +E CKL+R + +GFV+Y D + A AI T Sbjct: 40 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 99 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 L+G + + IKV++A S+ + +++V L + L FS Y +R+ Sbjct: 100 LNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQKELEQLFSQYGRIITSRI 156 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTG-KWLGSRQ-IRCNWATKTNAEEKQ---- 974 + D TG SRG GF+ F + EAE AI + G K G+ + I +A + + Q Sbjct: 157 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLS 216 Query: 975 ---ETDN--------HNAVVLTNGGSSNAAMEANQDTGSKENPENNP--------DFTTV 1097 ++ N H A N A + P P D T Sbjct: 217 QLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVPPSACPPRFSPITIDGMTS 276 Query: 1098 YVG----------------NLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFI 1217 VG NL + + L + F G V I + + KGFGF+ Sbjct: 277 LVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 336 Query: 1218 RYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 + + EAA+AI NG + + ++ S+ Sbjct: 337 TMTNYDEAAMAIASLNGYRLGDRVLQVSF 365 Score = 36.2 bits (82), Expect = 0.49 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Frame = +3 Query: 1005 TNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEV 1184 +NG SSN N + + + T + V L + ++E F + +G IE Sbjct: 14 SNGPSSN---NRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGS--IGEIESC 68 Query: 1185 RVQQEK------GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 ++ ++K G+GF+ Y +A AI NGL ++ K IK S+ Sbjct: 69 KLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 114
>Q61701:ELAV4_MOUSE ELAV-like protein 4 - Mus musculus (Mouse)| Length = 385 Score = 78.2 bits (191), Expect = 1e-13 Identities = 84/329 (25%), Positives = 135/329 (41%), Gaps = 49/329 (14%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK----EKSSFGFVDYYDQRSAALAIMT 632 ++ V + N+T+ +F G +E CKL+R + +GFV+Y D + A AI T Sbjct: 52 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 111 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 L+G + + IKV++A S+ + +++V L + L FS Y +R+ Sbjct: 112 LNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQKELEQLFSQYGRIITSRI 168 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTG-KWLGSRQ-IRCNWATKTNAEEKQ---- 974 + D TG SRG GF+ F + EAE AI + G K G+ + I +A + + Q Sbjct: 169 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFANNPSQKSSQALLS 228 Query: 975 ---ETDN--------HNAVVLTNGGSSNAAMEANQDTGSKENPENNP--------DFTTV 1097 ++ N H A N A + P P D T Sbjct: 229 QLYQSPNRRYPGPLHHQAQRFRLDNLLNMAYGVKRLMSGPVPPSACPPRFSPITIDGMTS 288 Query: 1098 YVG----------------NLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFI 1217 VG NL + + L + F G V I + + KGFGF+ Sbjct: 289 LVGMNIPGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 348 Query: 1218 RYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 + + EAA+AI NG + + ++ S+ Sbjct: 349 TMTNYDEAAMAIASLNGYRLGDRVLQVSF 377 Score = 36.2 bits (82), Expect = 0.49 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Frame = +3 Query: 1005 TNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEV 1184 +NG SSN N + + + T + V L + ++E F + +G IE Sbjct: 26 SNGPSSN---NRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGS--IGEIESC 80 Query: 1185 RVQQEK------GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 ++ ++K G+GF+ Y +A AI NGL ++ K IK S+ Sbjct: 81 KLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 126
>P49313:ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 279 Score = 77.8 bits (190), Expect = 1e-13 Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 4/207 (1%) Frame = +3 Query: 693 QREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQ 872 + + S IFVG+L + A L F + V++D TGRSRG+GFV+ ++ Sbjct: 79 EERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSK 138 Query: 873 QEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDT 1052 +E E A + G L R +R N EK+E + GGS Sbjct: 139 EEVEAACQQFNGYELDGRALRVN---SGPPPEKRENSSFRENSSFRGGSRGG-------- 187 Query: 1053 GSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE----KGFGFIR 1220 GS ++ VYVGNL V++D L F G +V ++ +GFGF+ Sbjct: 188 GSFDSSNR------VYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVT 241 Query: 1221 YSTHGEAALAIQMANGLVVRGKPIKCS 1301 YS+ E AI+ +G+ + G+ I+ S Sbjct: 242 YSSAEEVNNAIESLDGVDLNGRAIRVS 268 Score = 76.3 bits (186), Expect = 4e-13 Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 22/178 (12%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMTL 635 ++VGN+ + L E+F+ +G VE ++I + + FGFV + A Sbjct: 89 IFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQF 148 Query: 636 HGRHIYGQAIKVNWASASTQREDTS--------------GHF----HIFVGDLSSEVNDA 761 +G + G+A++VN +RE++S G F ++VG+L+ V+ Sbjct: 149 NGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQD 208 Query: 762 TLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIR 935 L FS DA+V++D +GRSRG+GFV++ + +E AI + G L R IR Sbjct: 209 ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIR 266 Score = 36.6 bits (83), Expect = 0.37 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%) Frame = +3 Query: 1047 DTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGF 1214 D G +E +PD ++VGNL + L F G V I + + +GFGF Sbjct: 74 DEGVEEERNFSPDLK-IFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGF 132 Query: 1215 IRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 + S+ E A Q NG + G+ ++ + G Sbjct: 133 VTMSSKEEVEAACQQFNGYELDGRALRVNSG 163
>P41891:GAR2_SCHPO Protein gar2 - Schizosaccharomyces pombe (Fission yeast)| Length = 500 Score = 77.8 bits (190), Expect = 1e-13 Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 6/212 (2%) Frame = +3 Query: 678 ASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFV 857 A + +D++ +FVG LS V+D L F Y + ARV+ D ++GRS+GYG+V Sbjct: 250 AKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYV 309 Query: 858 SFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAME 1037 F + A+ A+ K + R + + L+N +N Sbjct: 310 DFETPEAAKAAVAANGTKEIDGRMVNLD--------------------LSNPRPANPQPY 349 Query: 1038 ANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE------ 1199 A Q G+ + + P TV+VGNL D+L F G G I+ +R+ + Sbjct: 350 AQQRAGNFGDQLSEPS-DTVFVGNLSFNATEDDLSTAFG--GCGDIQSIRLPTDPQSGRL 406 Query: 1200 KGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 KGFG++ +S A ++M NG + G+P + Sbjct: 407 KGFGYVTFSDIDSAKKCVEM-NGHFIAGRPCR 437 Score = 34.3 bits (77), Expect = 1.9 Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 11/148 (7%) Frame = +3 Query: 858 SFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAME 1037 S ++ E E + E T + + + ++ + D+ ++ + SS + Sbjct: 179 SSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKK 238 Query: 1038 ANQDTGSKENP-------ENNPDFTTVYVGNLGHEVNRDELHRHFYNLG--VGA--IEEV 1184 + S+E P +++ + TV+VG L V+ L + F G VGA I + Sbjct: 239 RKAEPASEERPAKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDG 298 Query: 1185 RVQQEKGFGFIRYSTHGEAALAIQMANG 1268 + + KG+G++ + T EAA A ANG Sbjct: 299 QSGRSKGYGYVDFET-PEAAKAAVAANG 325
>Q08937:ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 291 Score = 77.4 bits (189), Expect = 2e-13 Identities = 60/199 (30%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG+L V+ A L F + V++D TGRSRG+GFV+ ++E E A + Sbjct: 89 LFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQF 148 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSN--AAMEANQDTGSKENPEN 1076 G + R IR N A K+E + GG+S+ + N G + Sbjct: 149 NGYEIDGRAIRVNAGP---APAKRENSSFGG---GRGGNSSYGGGRDGNSSFGGARGGRS 202 Query: 1077 NPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGEAA 1244 VYVGNL V+ L F G +V ++ +GFGF+ YS+ E Sbjct: 203 VDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVN 262 Query: 1245 LAIQMANGLVVRGKPIKCS 1301 AI NG+ + G+ I+ S Sbjct: 263 DAIDSLNGVDLDGRSIRVS 281 Score = 75.1 bits (183), Expect = 9e-13 Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 35/195 (17%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMTL 635 ++VGN+ +V L +F+ +G VE ++I + + FGFV + A Sbjct: 89 LFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQF 148 Query: 636 HGRHIYGQAIKVNWASASTQREDTS-------------------------------GHFH 722 +G I G+AI+VN A +RE++S Sbjct: 149 NGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNR 208 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 ++VG+LS V+D L FS + DA+V++D +GRSRG+GFV++ + +E AI + Sbjct: 209 VYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSL 268 Query: 903 TGKWLGSRQIRCNWA 947 G L R IR + A Sbjct: 269 NGVDLDGRSIRVSAA 283 Score = 40.8 bits (94), Expect = 0.020 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%) Frame = +3 Query: 420 SNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----SFGF 587 S G G + VYVGN+ V + L E+F G V K++ S FGF Sbjct: 193 SFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGF 252 Query: 588 VDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQRE 701 V Y + AI +L+G + G++I+V+ A +R+ Sbjct: 253 VTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERPRRQ 290 Score = 37.0 bits (84), Expect = 0.29 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 4/95 (4%) Frame = +3 Query: 1035 EANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEK 1202 + D E P + D ++VGNL V+ L F G V I + + + Sbjct: 70 QLEDDVEVAEQPRFSEDLK-LFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSR 128 Query: 1203 GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 GFGF+ ST E A Q NG + G+ I+ + G Sbjct: 129 GFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAG 163
>P26378:ELAV4_HUMAN ELAV-like protein 4 - Homo sapiens (Human)| Length = 380 Score = 76.3 bits (186), Expect = 4e-13 Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 4/153 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK----EKSSFGFVDYYDQRSAALAIMT 632 ++ V + N+T+ +F G +E CKL+R + +GFV+Y D + A AI T Sbjct: 47 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 106 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 L+G + + IKV++A S+ + +++V L + L FS Y +R+ Sbjct: 107 LNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQKELEQLFSQYGRIITSRI 163 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGK 911 + D TG SRG GF+ F + EAE AI + G+ Sbjct: 164 LVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 196 Score = 48.1 bits (113), Expect = 1e-04 Identities = 48/203 (23%), Positives = 80/203 (39%), Gaps = 6/203 (2%) Frame = +3 Query: 720 HIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++ V L + + F + +++ D TG+S GYGFV++ + ++AE AI Sbjct: 47 NLIVNYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINT 106 Query: 900 MTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENN 1079 + G L ++ I+ ++A SS + +AN Sbjct: 107 LNGLRLQTKTIKVSYARP---------------------SSASIRDAN------------ 133 Query: 1080 PDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQ----EKGFGFIRYSTHGEAAL 1247 +YV L + + EL + F G + V Q +G GFIR+ EA Sbjct: 134 -----LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 188 Query: 1248 AIQMANGLVVRG--KPIKCSWGN 1310 AI+ NG G +PI + N Sbjct: 189 AIKGLNGQKPSGATEPITVKFAN 211 Score = 36.2 bits (82), Expect = 0.49 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 6/106 (5%) Frame = +3 Query: 1005 TNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEV 1184 +NG SSN N + + + T + V L + ++E F + +G IE Sbjct: 21 SNGPSSN---NRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGS--IGEIESC 75 Query: 1185 RVQQEK------GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 ++ ++K G+GF+ Y +A AI NGL ++ K IK S+ Sbjct: 76 KLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY 121
>P49314:ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| plumbaginifolia (Leadwort-leaved tobacco) Length = 292 Score = 75.9 bits (185), Expect = 6e-13 Identities = 59/199 (29%), Positives = 89/199 (44%), Gaps = 6/199 (3%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG+L V+ A L F + V++D +GRSRG+GFV+ ++E E A + Sbjct: 90 LFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQF 149 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSN--AAMEANQDTGSKENPEN 1076 G + R IR N A K+E + GG+S+ + N G + Sbjct: 150 NGYEIDGRAIRVNAGP---APAKRENSSFGG---GRGGNSSYGGGRDGNSSFGGARGGRS 203 Query: 1077 NPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGEAA 1244 VYVGNL V+ L F G +V ++ +GFGF+ YS+ E Sbjct: 204 VDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVN 263 Query: 1245 LAIQMANGLVVRGKPIKCS 1301 AI NG+ + G+ I+ S Sbjct: 264 DAIDSLNGIDLDGRSIRVS 282 Score = 74.7 bits (182), Expect = 1e-12 Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 35/195 (17%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMTL 635 ++VGN+ +V L +F+ +G VE ++I + S FGFV + A Sbjct: 90 LFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQF 149 Query: 636 HGRHIYGQAIKVNWASASTQREDTS-------------------------------GHFH 722 +G I G+AI+VN A +RE++S Sbjct: 150 NGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNR 209 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 ++VG+LS V+D L FS + DA+V++D +GRSRG+GFV++ + +E AI + Sbjct: 210 VYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSL 269 Query: 903 TGKWLGSRQIRCNWA 947 G L R IR + A Sbjct: 270 NGIDLDGRSIRVSAA 284 Score = 40.4 bits (93), Expect = 0.026 Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%) Frame = +3 Query: 420 SNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----SFGF 587 S G G + VYVGN+ V + L E+F G V K++ S FGF Sbjct: 194 SFGGARGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGF 253 Query: 588 VDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQRE 701 V Y + AI +L+G + G++I+V+ A +R+ Sbjct: 254 VTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERPRRQ 291 Score = 37.0 bits (84), Expect = 0.29 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 4/95 (4%) Frame = +3 Query: 1035 EANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQ----EK 1202 + D E P + D ++VGNL V+ L F G I EV + + Sbjct: 71 QLEDDVEVAEQPRFSEDLK-LFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSR 129 Query: 1203 GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 GFGF+ ST E A Q NG + G+ I+ + G Sbjct: 130 GFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAG 164
>Q10355:YDB2_SCHPO Uncharacterized RNA-binding protein C22E12.02 - Schizosaccharomyces| pombe (Fission yeast) Length = 219 Score = 73.9 bits (180), Expect = 2e-12 Identities = 35/79 (44%), Positives = 54/79 (68%) Frame = +3 Query: 714 HFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAI 893 HF +FVG+L ++VND +LY FS YPS +V+ D + G++RG+GFVSF++ + A Sbjct: 29 HFRLFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRD-REGKTRGFGFVSFKDSDQFLKAW 87 Query: 894 TEMTGKWLGSRQIRCNWAT 950 E GK++GSR ++ + AT Sbjct: 88 REKNGKYIGSRPVKLSRAT 106 Score = 40.8 bits (94), Expect = 0.020 Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 3/80 (3%) Frame = +3 Query: 1071 ENNPDFTTVYVGNLGHEVNRDELHRHFY---NLGVGAIEEVRVQQEKGFGFIRYSTHGEA 1241 E +P+ ++VGNLG++VN + L++ F +L + R + +GFGF+ + + Sbjct: 24 EWDPNHFRLFVGNLGNDVNDESLYQAFSEYPSLVKTKVVRDREGKTRGFGFVSFKDSDQF 83 Query: 1242 ALAIQMANGLVVRGKPIKCS 1301 A + NG + +P+K S Sbjct: 84 LKAWREKNGKYIGSRPVKLS 103
>P82277:RRP2_SPIOL Plastid-specific 30S ribosomal protein 2, chloroplast precursor -| Spinacia oleracea (Spinach) Length = 260 Score = 73.6 bits (179), Expect = 3e-12 Identities = 56/194 (28%), Positives = 88/194 (45%), Gaps = 15/194 (7%) Frame = +3 Query: 411 EPVSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---- 578 E S+ D R +YVGN+ N+ + L + + G +E +++ + S Sbjct: 67 ETSSSSTASSSSDGEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRR 126 Query: 579 FGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWAS--------ASTQREDTS---GHFHI 725 FGFV A I L+ I G+ IKVN A+TQ ED+ + + Sbjct: 127 FGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQFVESPYKV 186 Query: 726 FVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMT 905 ++G+L+ V + L FS A+V T +S G+GFVSF +++E E AI + Sbjct: 187 YIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEEVEAAIQALN 246 Query: 906 GKWLGSRQIRCNWA 947 L ++IR N A Sbjct: 247 NSVLEGQKIRVNKA 260 Score = 71.6 bits (174), Expect = 1e-11 Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 5/211 (2%) Frame = +3 Query: 678 ASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFV 857 +S ++ D G ++VG++ +N+ L + + A VM+D +GRSR +GFV Sbjct: 71 SSTASSSSDGEGARRLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFV 130 Query: 858 SFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAME 1037 + + ++A I ++ +G R+I+ N K G A + Sbjct: 131 TMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLE-----------------GMDIATTQ 173 Query: 1038 ANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYN-----LGVGAIEEVRVQQEK 1202 A +D+ E+P VY+GNL V +EL + F++ LG + Sbjct: 174 A-EDSQFVESPYK------VYIGNLAKTVT-NELLKDFFSEKGKVLGAKVQRTPGTSKSN 225 Query: 1203 GFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 GFGF+ +S+ E AIQ N V+ G+ I+ Sbjct: 226 GFGFVSFSSEEEVEAAIQALNNSVLEGQKIR 256
>P19684:ROC5_NICSY 33 kDa ribonucleoprotein, chloroplast precursor - Nicotiana| sylvestris (Wood tobacco) Length = 324 Score = 70.1 bits (170), Expect = 3e-11 Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 25/206 (12%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLI----RKEKSSFGFVDYYDQRSAALAIMTL 635 +YVGN+ ++T + L E+F +G V +++ F FV A AI Sbjct: 116 LYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLF 175 Query: 636 HGRHIYGQAIKVNWASA--------------STQREDTSGHFHIFVGDLSSEVNDATLYA 773 G + G+ +KVN+ ST + ++V +LS + L Sbjct: 176 DGSQVGGRTVKVNFPEVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRD 235 Query: 774 CFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA-- 947 F+ P A+V++D +GRSRG+GF++F + + +A+ M L R +R N A Sbjct: 236 AFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQ 295 Query: 948 -----TKTNAEEKQETDNHNAVVLTN 1010 + E E D+ N+ +L++ Sbjct: 296 KAPVSSPPVVETSPENDSDNSELLSS 321 Score = 54.3 bits (129), Expect = 2e-06 Identities = 42/195 (21%), Positives = 84/195 (43%), Gaps = 4/195 (2%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 ++VG+L + + L F+ + ++ +++D T RSRG+ FV+ + +EA+ AI Sbjct: 116 LYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLF 175 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 G +G R ++ N+ E++ +A + G ++P Sbjct: 176 DGSQVGGRTVKVNFPEVPRGGEREVM---------------SAKIRSTYQGFVDSPHK-- 218 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYN----LGVGAIEEVRVQQEKGFGFIRYSTHGEAALA 1250 +YV NL + L F + + I + + +GFGFI +S+ A Sbjct: 219 ----LYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSAEAMNSA 274 Query: 1251 IQMANGLVVRGKPIK 1295 + N + + G+P++ Sbjct: 275 LDTMNEVELEGRPLR 289
>P19339:SXL_DROME Protein sex-lethal - Drosophila melanogaster (Fruit fly)| Length = 354 Score = 69.3 bits (168), Expect = 5e-11 Identities = 46/158 (29%), Positives = 82/158 (51%), Gaps = 6/158 (3%) Frame = +3 Query: 447 DPSTCRSVYVGNVHP-NVTENLLIEVFQGSGPVERCKLIRKEKS--SFG--FVDYYDQRS 611 DP + + N P ++T+ L +F+ GP+ C+++R K+ SFG FVD+ + Sbjct: 119 DPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 178 Query: 612 AALAIMTLHGRHIYGQAIKVNWASASTQR-EDTSGHFHIFVGDLSSEVNDATLYACFSTY 788 + AI L+G + + +KV++A + +DT +++V +L + D L F Y Sbjct: 179 SQRAIKVLNGITVRNKRLKVSYARPGGESIKDT----NLYVTNLPRTITDDQLDTIFGKY 234 Query: 789 PSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 S ++ D TGR RG FV + ++EA+ AI+ + Sbjct: 235 GSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 272 Score = 55.5 bits (132), Expect = 8e-07 Identities = 47/205 (22%), Positives = 83/205 (40%), Gaps = 4/205 (1%) Frame = +3 Query: 681 SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVS 860 S + + + ++ V L ++ D LYA F + R+M D KTG S GY FV Sbjct: 113 SDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVD 172 Query: 861 FRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEA 1040 F ++ +++ AI + G + +++++ ++A GG E+ Sbjct: 173 FTSEMDSQRAIKVLNGITVRNKRLKVSYARP-------------------GG------ES 207 Query: 1041 NQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGF 1208 +D T +YV NL + D+L F G + + + +G Sbjct: 208 IKD-------------TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGV 254 Query: 1209 GFIRYSTHGEAALAIQMANGLVVRG 1283 F+RY+ EA AI N ++ G Sbjct: 255 AFVRYNKREEAQEAISALNNVIPEG 279
>O01671:SXL_MEGSC Sex-lethal homolog - Megaselia scalaris| Length = 321 Score = 68.9 bits (167), Expect = 7e-11 Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 5/151 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSF----GFVDYYDQRSAALAIMT 632 ++ V + ++ + L +F+ GP+ C+++R K+ + GFVD+ + A AI Sbjct: 79 NLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINN 138 Query: 633 LHGRHIYGQAIKVNWA-SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDAR 809 L+G + + IKV++A Q DT +++V +LS + D L F Y Sbjct: 139 LNGITVRNKRIKVSFARPGGEQLRDT----NLYVTNLSRSITDEQLETIFGKYGQIVQKN 194 Query: 810 VMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 ++ D TG RG F+ F ++EA+ AI+ + Sbjct: 195 ILRDKHTGTPRGVAFIRFNKREEAQEAISAL 225 Score = 57.8 bits (138), Expect = 2e-07 Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 4/192 (2%) Frame = +3 Query: 720 HIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++ V L ++ D LY+ F T + R+M D KTG S GYGFV F ++ +A AI Sbjct: 79 NLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINN 138 Query: 900 MTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENN 1079 + G + +++I+ ++A + E+ ++T+ Sbjct: 139 LNGITVRNKRIKVSFA-RPGGEQLRDTN-------------------------------- 165 Query: 1080 PDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAAL 1247 +YV NL + ++L F G + + +G FIR++ EA Sbjct: 166 -----LYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQE 220 Query: 1248 AIQMANGLVVRG 1283 AI N ++ G Sbjct: 221 AISALNNVIPEG 232 Score = 38.5 bits (88), Expect = 0.098 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 6/113 (5%) Frame = +3 Query: 984 NHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG 1163 N+N + + G +N+ N T N T + V L ++ EL+ F Sbjct: 51 NNNCGLGSVGNMANSTNSLNSGT--------NNSGTNLIVNYLPQDMQDRELYSLFRT-- 100 Query: 1164 VGAIEEVRVQQEK------GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 +G I R+ ++ G+GF+ + + +A AI NG+ VR K IK S+ Sbjct: 101 IGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRNKRIKVSF 153
>Q24668:SXL_DROSU Protein sex-lethal - Drosophila subobscura (Fruit fly)| Length = 354 Score = 68.2 bits (165), Expect = 1e-10 Identities = 44/155 (28%), Positives = 82/155 (52%), Gaps = 5/155 (3%) Frame = +3 Query: 453 STCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS--SFG--FVDYYDQRSAAL 620 S+ ++ V + ++T+ L +F+ GP+ C+++R K+ SFG FVD+ + + Sbjct: 124 SSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQR 183 Query: 621 AIMTLHGRHIYGQAIKVNWASASTQR-EDTSGHFHIFVGDLSSEVNDATLYACFSTYPSC 797 AI L+G + + +KV++A + +DT +++V +L + D L F Y S Sbjct: 184 AIKVLNGITVRNKRLKVSYARPGGESIKDT----NLYVTNLPRTITDDQLDTIFGKYGSI 239 Query: 798 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 ++ D TGR RG FV + ++EA+ AI+ + Sbjct: 240 VQKNILRDKLTGRPRGVAFVRYNKREEAQEAISAL 274 Score = 56.6 bits (135), Expect = 3e-07 Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 4/199 (2%) Frame = +3 Query: 699 EDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQE 878 + S + ++ V L ++ D LYA F + R+M D KTG S GY FV F ++ + Sbjct: 121 DQRSSNTNLIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMD 180 Query: 879 AETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGS 1058 ++ AI + G + +++++ ++A GG E+ +D Sbjct: 181 SQRAIKVLNGITVRNKRLKVSYARP-------------------GG------ESIKD--- 212 Query: 1059 KENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYS 1226 T +YV NL + D+L F G + + + +G F+RY+ Sbjct: 213 ----------TNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 262 Query: 1227 THGEAALAIQMANGLVVRG 1283 EA AI N ++ G Sbjct: 263 KREEAQEAISALNNVIPEG 281
>Q9SVM8:GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial precursor -| Arabidopsis thaliana (Mouse-ear cress) Length = 158 Score = 67.8 bits (164), Expect = 2e-10 Identities = 34/73 (46%), Positives = 48/73 (65%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F+G LS +DA+L F+ + DA+V+ D +TGRSRG+GFV+F ++ A AI+EM Sbjct: 37 LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96 Query: 903 TGKWLGSRQIRCN 941 GK L R IR N Sbjct: 97 DGKELNGRHIRVN 109 Score = 38.1 bits (87), Expect = 0.13 Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 8/96 (8%) Frame = +3 Query: 420 SNGNLPPGFDPSTCR----SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS--- 578 SNGN+P + R +++G + + L + F G V K+I ++ Sbjct: 17 SNGNVPVTSMLGSLRLMSTKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSR 76 Query: 579 -FGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWAS 683 FGFV++ D+ +A AI + G+ + G+ I+VN A+ Sbjct: 77 GFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPAN 112 Score = 33.5 bits (75), Expect = 3.2 Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%) Frame = +3 Query: 1089 TTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGEAALAIQ 1256 T +++G L + L F + G +V V +E +GFGF+ ++ G A AI Sbjct: 35 TKLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAIS 94 Query: 1257 MANGLVVRGKPIKCSWGN 1310 +G + G+ I+ + N Sbjct: 95 EMDGKELNGRHIRVNPAN 112
>O17310:SXL_MUSDO Sex-lethal homolog - Musca domestica (House fly)| Length = 324 Score = 67.0 bits (162), Expect = 3e-10 Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 5/151 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS--SFG--FVDYYDQRSAALAIMT 632 ++ V + ++T+ L +F+ GP+ C++++ K+ SFG FVD+ + A AI T Sbjct: 103 NLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKT 162 Query: 633 LHGRHIYGQAIKVNWASASTQR-EDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDAR 809 ++G + + +KV++A + +DT +++V +L + D L F Y + Sbjct: 163 VNGITVRNKRLKVSYARPGGESIKDT----NLYVTNLPRTITDDELEKIFGKYGNIVQKN 218 Query: 810 VMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 ++ D TGR RG FV F ++EA+ AI+ + Sbjct: 219 ILRDKLTGRPRGVAFVRFNKREEAQEAISAL 249 Score = 58.2 bits (139), Expect = 1e-07 Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 4/192 (2%) Frame = +3 Query: 720 HIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++ V L ++ D LYA F T + R+M D KTG S GY FV F ++ +A+ AI Sbjct: 103 NLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKT 162 Query: 900 MTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENN 1079 + G + +++++ ++A GG E+ +D Sbjct: 163 VNGITVRNKRLKVSYARP-------------------GG------ESIKD---------- 187 Query: 1080 PDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAAL 1247 T +YV NL + DEL + F G + + + +G F+R++ EA Sbjct: 188 ---TNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQE 244 Query: 1248 AIQMANGLVVRG 1283 AI N ++ G Sbjct: 245 AISALNNVIPEG 256
>Q5RC80:RBM39_PONPY RNA-binding protein 39 - Pongo pygmaeus (Orangutan)| Length = 524 Score = 66.2 bits (160), Expect = 4e-10 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%) Frame = +3 Query: 411 EPVSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----S 578 EP+ N L P + R+V+ + + L E F G V ++I S Sbjct: 140 EPIDN--LTP--EERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195 Query: 579 FGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQR---------EDTSGHFHIFV 731 +V++ D S LAI L G+ + G I V + A R + ++G ++V Sbjct: 196 IAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYV 254 Query: 732 GDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGK 911 G L + + L F + ++M D++TGRS+GYGF++F + + A+ A+ ++ G Sbjct: 255 GSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGF 314 Query: 912 WLGSRQIRCNWATK 953 L R ++ T+ Sbjct: 315 ELAGRPMKVGHVTE 328 Score = 48.9 bits (115), Expect = 7e-05 Identities = 49/197 (24%), Positives = 76/197 (38%), Gaps = 6/197 (3%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F L++ + L FST D R++ D + RS+G +V F + AI Sbjct: 155 VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIG-- 212 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 G R + + + EK AAM N GS Sbjct: 213 ---LTGQRVLGVPIIVQASQAEKNRA---------------AAMANNLQKGSAGPMR--- 251 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE------KGFGFIRYSTHGEAA 1244 +YVG+L + D L F G IE +++ + KG+GFI +S A Sbjct: 252 ----LYVGSLHFNITEDMLRGIFEPFG--RIESIQLMMDSETGRSKGYGFITFSDSECAK 305 Query: 1245 LAIQMANGLVVRGKPIK 1295 A++ NG + G+P+K Sbjct: 306 KALEQLNGFELAGRPMK 322
>Q8VH51:RBM39_MOUSE RNA-binding protein 39 - Mus musculus (Mouse)| Length = 530 Score = 66.2 bits (160), Expect = 4e-10 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%) Frame = +3 Query: 411 EPVSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----S 578 EP+ N L P + R+V+ + + L E F G V ++I S Sbjct: 140 EPIDN--LTP--EERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRG 195 Query: 579 FGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQR---------EDTSGHFHIFV 731 +V++ D S LAI L G+ + G I V + A R + ++G ++V Sbjct: 196 IAYVEFVDVSSVRLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYV 254 Query: 732 GDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGK 911 G L + + L F + ++M D++TGRS+GYGF++F + + A+ A+ ++ G Sbjct: 255 GSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGF 314 Query: 912 WLGSRQIRCNWATK 953 L R ++ T+ Sbjct: 315 ELAGRPMKVGHVTE 328 Score = 50.4 bits (119), Expect = 3e-05 Identities = 50/197 (25%), Positives = 76/197 (38%), Gaps = 6/197 (3%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F L++ + L FST D R++ D + RSRG +V F + AI Sbjct: 155 VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSRGIAYVEFVDVSSVRLAIG-- 212 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 G R + + + EK AAM N GS Sbjct: 213 ---LTGQRVLGVPIIVQASQAEKNRA---------------AAMANNLQKGSAGPMR--- 251 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE------KGFGFIRYSTHGEAA 1244 +YVG+L + D L F G IE +++ + KG+GFI +S A Sbjct: 252 ----LYVGSLHFNITEDMLRGIFEPFG--RIESIQLMMDSETGRSKGYGFITFSDSECAK 305 Query: 1245 LAIQMANGLVVRGKPIK 1295 A++ NG + G+P+K Sbjct: 306 KALEQLNGFELAGRPMK 322
>Q14498:RBM39_HUMAN RNA-binding protein 39 - Homo sapiens (Human)| Length = 530 Score = 66.2 bits (160), Expect = 4e-10 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 13/194 (6%) Frame = +3 Query: 411 EPVSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----S 578 EP+ N L P + R+V+ + + L E F G V ++I S Sbjct: 140 EPIDN--LTP--EERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKG 195 Query: 579 FGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQR---------EDTSGHFHIFV 731 +V++ D S LAI L G+ + G I V + A R + ++G ++V Sbjct: 196 IAYVEFVDVSSVPLAI-GLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYV 254 Query: 732 GDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGK 911 G L + + L F + ++M D++TGRS+GYGF++F + + A+ A+ ++ G Sbjct: 255 GSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGF 314 Query: 912 WLGSRQIRCNWATK 953 L R ++ T+ Sbjct: 315 ELAGRPMKVGHVTE 328 Score = 48.9 bits (115), Expect = 7e-05 Identities = 49/197 (24%), Positives = 76/197 (38%), Gaps = 6/197 (3%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F L++ + L FST D R++ D + RS+G +V F + AI Sbjct: 155 VFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIG-- 212 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 G R + + + EK AAM N GS Sbjct: 213 ---LTGQRVLGVPIIVQASQAEKNRA---------------AAMANNLQKGSAGPMR--- 251 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE------KGFGFIRYSTHGEAA 1244 +YVG+L + D L F G IE +++ + KG+GFI +S A Sbjct: 252 ----LYVGSLHFNITEDMLRGIFEPFG--RIESIQLMMDSETGRSKGYGFITFSDSECAK 305 Query: 1245 LAIQMANGLVVRGKPIK 1295 A++ NG + G+P+K Sbjct: 306 KALEQLNGFELAGRPMK 322
>O93235:CIRBP_XENLA Cold-inducible RNA-binding protein - Xenopus laevis (African clawed| frog) Length = 163 Score = 65.9 bits (159), Expect = 6e-10 Identities = 33/83 (39%), Positives = 51/83 (61%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F+G L+ E N+ L F+ Y S+ V+ D +T RSRG+GFV+F N +A+ A+ M Sbjct: 7 LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66 Query: 903 TGKWLGSRQIRCNWATKTNAEEK 971 GK + RQIR + A K++ E + Sbjct: 67 NGKSVDGRQIRVDQAGKSSGERR 89 Score = 37.7 bits (86), Expect = 0.17 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 4/71 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 +++G L E N D L + F G V +++ ++ +GFGF+ + +A A+ Sbjct: 7 LFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMAM 66 Query: 1263 NGLVVRGKPIK 1295 NG V G+ I+ Sbjct: 67 NGKSVDGRQIR 77
>O97018:SXL_CHRRU Sex-lethal homolog - Chrysomya rufifacies (Hairy maggot blowfly)| Length = 307 Score = 65.5 bits (158), Expect = 8e-10 Identities = 42/151 (27%), Positives = 81/151 (53%), Gaps = 5/151 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS--SFG--FVDYYDQRSAALAIMT 632 ++ V + ++T+ L +F+ GP+ C++++ K+ SFG FVD+ + A AI + Sbjct: 86 NLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKS 145 Query: 633 LHGRHIYGQAIKVNWASASTQR-EDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDAR 809 L+G + + +KV++A + +DT +++V +L + D L F Y + Sbjct: 146 LNGVTVRNKRLKVSYARPGGESIKDT----NLYVTNLPRTITDDELEKIFGKYGNIVQKN 201 Query: 810 VMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 ++ D TG+ RG FV F ++EA+ AI+ + Sbjct: 202 ILRDKLTGKPRGVAFVRFNKREEAQEAISAL 232 Score = 59.3 bits (142), Expect = 5e-08 Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 4/192 (2%) Frame = +3 Query: 720 HIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++ V L ++ D LYA F T + R+M D KTG S GY FV F ++ +A+ AI Sbjct: 86 NLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKS 145 Query: 900 MTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENN 1079 + G + +++++ ++A GG E+ +D Sbjct: 146 LNGVTVRNKRLKVSYARP-------------------GG------ESIKD---------- 170 Query: 1080 PDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAAL 1247 T +YV NL + DEL + F G + + + +G F+R++ EA Sbjct: 171 ---TNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQE 227 Query: 1248 AIQMANGLVVRG 1283 AI N ++ G Sbjct: 228 AISALNNVIPEG 239
>P16914:ELAV_DROME Protein elav - Drosophila melanogaster (Fruit fly)| Length = 483 Score = 65.5 bits (158), Expect = 8e-10 Identities = 79/364 (21%), Positives = 141/364 (38%), Gaps = 64/364 (17%) Frame = +3 Query: 405 QMEPVSNGNLPPGFD------PSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK 566 Q +P +NGN G T ++ V + +TE+ + +F G +E KLIR Sbjct: 124 QAQPNTNGNAGSGSQNGSNGSTETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRD 183 Query: 567 EKS-----------------SFGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQ 695 + +GFV+Y + A A+ L+G + + IKV++A S+ Sbjct: 184 KSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSS- 242 Query: 696 REDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWD-NKTGRSRGYGFVSFRNQ 872 D +++V L + L A F+ + + +R++ + +++G GF+ F + Sbjct: 243 --DAIKGANLYVSGLPKTMTQQELEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKR 300 Query: 873 QEAETAITEMTGKWLGS---------------------------------RQIRCNWATK 953 +EA AI + G S R+I T Sbjct: 301 EEATRAIIALNGTTPSSCTDPIVVKFSNTPGSTSKIIQPQLPAFLNPQLVRRIGGAMHTP 360 Query: 954 TN---AEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEV 1124 N A + V+L NG + AA +G +++ NL E Sbjct: 361 VNKGLARFSPMAGDMLDVMLPNGLGAAAAAATTLASGP-------GGAYPIFIYNLAPET 413 Query: 1125 NRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 L + F G V +++ Q KG+GF+ + + EAA+AI+ NG + + + Sbjct: 414 EEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVL 473 Query: 1293 KCSW 1304 + S+ Sbjct: 474 QVSF 477 Score = 57.8 bits (138), Expect = 2e-07 Identities = 28/91 (30%), Positives = 50/91 (54%) Frame = +3 Query: 678 ASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFV 857 A+A+T G + IF+ +L+ E +A L+ F + + +++ D T + +GYGFV Sbjct: 389 AAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 448 Query: 858 SFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 S N EA AI + G +G+R ++ ++ T Sbjct: 449 SMTNYDEAAMAIRALNGYTMGNRVLQVSFKT 479
>Q5RF83:CIRBP_PONPY Cold-inducible RNA-binding protein - Pongo pygmaeus (Orangutan)| Length = 172 Score = 65.5 bits (158), Expect = 8e-10 Identities = 34/79 (43%), Positives = 50/79 (63%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG LS + N+ +L FS Y S+ V+ D +T RSRG+GFV+F N +A+ A+ M Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 903 TGKWLGSRQIRCNWATKTN 959 GK + RQIR + A K++ Sbjct: 68 NGKSVDGRQIRVDQAGKSS 86 Score = 37.4 bits (85), Expect = 0.22 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 ++VG L + N L + F G V +++ Q+ +GFGF+ + +A A+ Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1263 NGLVVRGKPIK 1295 NG V G+ I+ Sbjct: 68 NGKSVDGRQIR 78
>Q14011:CIRBP_HUMAN Cold-inducible RNA-binding protein - Homo sapiens (Human)| Length = 172 Score = 65.5 bits (158), Expect = 8e-10 Identities = 34/79 (43%), Positives = 50/79 (63%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG LS + N+ +L FS Y S+ V+ D +T RSRG+GFV+F N +A+ A+ M Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 903 TGKWLGSRQIRCNWATKTN 959 GK + RQIR + A K++ Sbjct: 68 NGKSVDGRQIRVDQAGKSS 86 Score = 37.4 bits (85), Expect = 0.22 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 ++VG L + N L + F G V +++ Q+ +GFGF+ + +A A+ Sbjct: 8 LFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1263 NGLVVRGKPIK 1295 NG V G+ I+ Sbjct: 68 NGKSVDGRQIR 78
>P60825:CIRBP_RAT Cold-inducible RNA-binding protein - Rattus norvegicus (Rat)| Length = 172 Score = 65.1 bits (157), Expect = 1e-09 Identities = 34/79 (43%), Positives = 49/79 (62%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG LS + N+ L FS Y S+ V+ D +T RSRG+GFV+F N +A+ A+ M Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 903 TGKWLGSRQIRCNWATKTN 959 GK + RQIR + A K++ Sbjct: 68 NGKSVDGRQIRVDQAGKSS 86 Score = 37.0 bits (84), Expect = 0.29 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 ++VG L + N L + F G V +++ Q+ +GFGF+ + +A A+ Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1263 NGLVVRGKPIK 1295 NG V G+ I+ Sbjct: 68 NGKSVDGRQIR 78
>P60824:CIRBP_MOUSE Cold-inducible RNA-binding protein - Mus musculus (Mouse)| Length = 172 Score = 65.1 bits (157), Expect = 1e-09 Identities = 34/79 (43%), Positives = 49/79 (62%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG LS + N+ L FS Y S+ V+ D +T RSRG+GFV+F N +A+ A+ M Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 903 TGKWLGSRQIRCNWATKTN 959 GK + RQIR + A K++ Sbjct: 68 NGKSVDGRQIRVDQAGKSS 86 Score = 37.0 bits (84), Expect = 0.29 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 ++VG L + N L + F G V +++ Q+ +GFGF+ + +A A+ Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1263 NGLVVRGKPIK 1295 NG V G+ I+ Sbjct: 68 NGKSVDGRQIR 78
>P60826:CIRBP_CRIGR Cold-inducible RNA-binding protein - Cricetulus griseus (Chinese| hamster) Length = 172 Score = 65.1 bits (157), Expect = 1e-09 Identities = 34/79 (43%), Positives = 49/79 (62%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG LS + N+ L FS Y S+ V+ D +T RSRG+GFV+F N +A+ A+ M Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 903 TGKWLGSRQIRCNWATKTN 959 GK + RQIR + A K++ Sbjct: 68 NGKSVDGRQIRVDQAGKSS 86 Score = 37.0 bits (84), Expect = 0.29 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 ++VG L + N L + F G V +++ Q+ +GFGF+ + +A A+ Sbjct: 8 LFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAM 67 Query: 1263 NGLVVRGKPIK 1295 NG V G+ I+ Sbjct: 68 NGKSVDGRQIR 78
>O61374:SXL_CERCA Sex-lethal homolog - Ceratitis capitata (Mediterranean fruit fly)| Length = 348 Score = 64.7 bits (156), Expect = 1e-09 Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 5/151 (3%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS--SFG--FVDYYDQRSAALAIMT 632 ++ V + ++T+ L +F+ GP+ C+++R K+ SFG FVD+ + + AI + Sbjct: 111 NLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKS 170 Query: 633 LHGRHIYGQAIKVNWASASTQR-EDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDAR 809 L+G + + +KV++A + +DT +++V +L + D L F Y Sbjct: 171 LNGITVRNKRLKVSYARPGGESIKDT----NLYVTNLPRTITDDQLDTIFGKYGMIVQKN 226 Query: 810 VMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 ++ D TG+ RG FV F ++EA+ AI+ + Sbjct: 227 ILRDKLTGKPRGVAFVRFNKREEAQEAISAL 257 Score = 55.8 bits (133), Expect = 6e-07 Identities = 46/192 (23%), Positives = 80/192 (41%), Gaps = 4/192 (2%) Frame = +3 Query: 720 HIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++ V L ++ D LYA F T + R+M D KTG S GY FV F + +++ AI Sbjct: 111 NLIVNYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKS 170 Query: 900 MTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENN 1079 + G + +++++ ++A GG E+ +D Sbjct: 171 LNGITVRNKRLKVSYARP-------------------GG------ESIKD---------- 195 Query: 1080 PDFTTVYVGNLGHEVNRDELHRHFYNLGV----GAIEEVRVQQEKGFGFIRYSTHGEAAL 1247 T +YV NL + D+L F G+ + + + +G F+R++ EA Sbjct: 196 ---TNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQE 252 Query: 1248 AIQMANGLVVRG 1283 AI N ++ G Sbjct: 253 AISALNNVIPEG 264
>P15771:NUCL_CHICK Nucleolin - Gallus gallus (Chicken)| Length = 694 Score = 63.9 bits (154), Expect = 2e-09 Identities = 61/271 (22%), Positives = 115/271 (42%), Gaps = 8/271 (2%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFG--FVDYYDQRSAALAIMTL 635 R+++V N+ VTE+ + VF+ + +E ++ KE SS G ++++ + A A+ Sbjct: 371 RTLFVKNLPYRVTEDEMKNVFENA--LEVRLVLNKEGSSKGMAYIEFKTEAEAEKALEEK 428 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGHFH-----IFVGDLSSEVNDATLYACFSTYPSCS 800 G + G+A+ +++ +Q+E G + V +LS ++ TL F S Sbjct: 429 QGTEVDGRAMVIDYTGEKSQQESQKGGGERESKTLIVNNLSYAASEETLQELFKKATSIK 488 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQET 980 M N GR +GY FV F ++A+ A+ + R IR +++ + + Sbjct: 489 ----MPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSSPSWQK----- 539 Query: 981 DNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFY-N 1157 G+ NA NQ + T++V L + + L F + Sbjct: 540 -----------GNMNARGGFNQQS------------KTLFVRGLSEDTTEETLRESFEGS 576 Query: 1158 LGVGAIEEVRVQQEKGFGFIRYSTHGEAALA 1250 + + + KGFGF+ +S+ +A A Sbjct: 577 ISARIVTDRDTGSSKGFGFVDFSSPEDAKAA 607 Score = 58.2 bits (139), Expect = 1e-07 Identities = 42/169 (24%), Positives = 85/169 (50%), Gaps = 7/169 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHG 641 +++ V N+ +E L E+F+ + ++ + + + FV++ A A+ + + Sbjct: 461 KTLIVNNLSYAASEETLQELFKKATSIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNN 520 Query: 642 RHIYGQAIKVNWASASTQREDTS--GHFH-----IFVGDLSSEVNDATLYACFSTYPSCS 800 I G+AI++ ++S S Q+ + + G F+ +FV LS + + TL F S Sbjct: 521 TEIEGRAIRLEFSSPSWQKGNMNARGGFNQQSKTLFVRGLSEDTTEETLRESFEGSIS-- 578 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 AR++ D TG S+G+GFV F + ++A+ A M + ++ ++A Sbjct: 579 -ARIVTDRDTGSSKGFGFVDFSSPEDAKAAKEAMEDGEIDGNKVTLDFA 626 Score = 57.8 bits (138), Expect = 2e-07 Identities = 59/293 (20%), Positives = 119/293 (40%), Gaps = 6/293 (2%) Frame = +3 Query: 450 PSTCRSVYVGNVHPNVTENLL---IEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAAL 620 P++ S++V N+ P L I+ F G ++ ++ FG+VD+ Sbjct: 277 PASAFSLFVKNLTPTKDYEELRTAIKEFFGKKNLQVSEVRIGSSKRFGYVDFLSAEDMDK 336 Query: 621 AIMTLHGRHIYGQAIKVNWASASTQREDTSGHFH---IFVGDLSSEVNDATLYACFSTYP 791 A+ L+G+ + G IK+ A + ++ +FV +L V + + F Sbjct: 337 ALQ-LNGKKLMGLEIKLEKAKSKESLKENKKERDARTLFVKNLPYRVTEDEMKNVFE--- 392 Query: 792 SCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEK 971 + + R++ NK G S+G ++ F+ + EAE A+ EEK Sbjct: 393 NALEVRLVL-NKEGSSKGMAYIEFKTEAEAEKAL-----------------------EEK 428 Query: 972 QETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHF 1151 Q T+ ++ + + E+ + G +E+ T+ V NL + + + L F Sbjct: 429 QGTEVDGRAMVIDYTGEKSQQESQKGGGERES-------KTLIVNNLSYAASEETLQELF 481 Query: 1152 YNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSWGN 1310 + + + KG+ F+ + T +A A+ N + G+ I+ + + Sbjct: 482 KKATSIKMPQNNQGRPKGYAFVEFPTAEDAKEALNSCNNTEIEGRAIRLEFSS 534 Score = 32.7 bits (73), Expect = 5.4 Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 3/114 (2%) Frame = +3 Query: 963 EEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELH 1142 E+++E+++ V G + K+ E +++V NL + +EL Sbjct: 239 EDEEESEDEKPVKEAPGKRKKEMANKSAPEAKKKKTETPASAFSLFVKNLTPTKDYEELR 298 Query: 1143 ---RHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 + F+ + EVR+ K FG++ + + + A+Q+ NG + G IK Sbjct: 299 TAIKEFFGKKNLQVSEVRIGSSKRFGYVDFLSAEDMDKALQL-NGKKLMGLEIK 351
>Q43349:ROC2_ARATH 29 kDa ribonucleoprotein, chloroplast precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 342 Score = 63.5 bits (153), Expect = 3e-09 Identities = 62/248 (25%), Positives = 92/248 (37%), Gaps = 41/248 (16%) Frame = +3 Query: 681 SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVS 860 SA +R S +FVG+LS V+ A L F + + V++D TGRSRG+GFV+ Sbjct: 87 SAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVT 146 Query: 861 FRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNA--------------- 995 E E A + G R +R N E+ + + Sbjct: 147 MSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPRSGGYGSERGGGYGSER 206 Query: 996 --------------------VVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLG 1115 +GG + ++ +GS + +YVGNL Sbjct: 207 GGGYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSGSG-SGSGSGNRLYVGNLS 265 Query: 1116 HEVNRDELHRHFYNLGVGAIEEVRV------QQEKGFGFIRYSTHGEAALAIQMANGLVV 1277 V+ L F G + E RV + KGFGF+ S+ E AI NG + Sbjct: 266 WGVDDMALENLFNE--QGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADL 323 Query: 1278 RGKPIKCS 1301 G+ I+ S Sbjct: 324 DGRQIRVS 331 Score = 62.8 bits (151), Expect = 5e-09 Identities = 34/99 (34%), Positives = 55/99 (55%) Frame = +3 Query: 651 YGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKT 830 YG + + ++ S S + ++VG+LS V+D L F+ +ARV++D + Sbjct: 235 YGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDS 294 Query: 831 GRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 GRS+G+GFV+ + QE + AI + G L RQIR + A Sbjct: 295 GRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEA 333 Score = 43.1 bits (100), Expect = 0.004 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 4/91 (4%) Frame = +3 Query: 1047 DTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGF 1214 D+ E +PD ++VGNL V+ +L + F + G V I + + +GFGF Sbjct: 86 DSAPVERNSFSPDLK-LFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGF 144 Query: 1215 IRYSTHGEAALAIQMANGLVVRGKPIKCSWG 1307 + ST E A Q NG G+P++ + G Sbjct: 145 VTMSTAAEVEAAAQQFNGYEFEGRPLRVNAG 175 Score = 36.2 bits (82), Expect = 0.49 Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----SFGFVDYYDQRSAALAIMTL 635 +YVGN+ V + L +F G V ++I S FGFV + AI +L Sbjct: 259 LYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSL 318 Query: 636 HGRHIYGQAIKVNWASASTQR 698 +G + G+ I+V+ A A R Sbjct: 319 NGADLDGRQIRVSEAEARPPR 339
>Q05966:GRP10_BRANA Glycine-rich RNA-binding protein 10 - Brassica napus (Rape)| Length = 169 Score = 63.5 bits (153), Expect = 3e-09 Identities = 32/77 (41%), Positives = 47/77 (61%) Frame = +3 Query: 717 FHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIT 896 + FVG L+ DA L FS + D++++ D +TGRSRG+GFV+F++++ + AI Sbjct: 6 YRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAID 65 Query: 897 EMTGKWLGSRQIRCNWA 947 EM GK L R I N A Sbjct: 66 EMNGKELDGRTITVNEA 82
>Q99070:GRP2_SORBI Glycine-rich RNA-binding protein 2 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 168 Score = 62.8 bits (151), Expect = 5e-09 Identities = 32/77 (41%), Positives = 45/77 (58%) Frame = +3 Query: 717 FHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIT 896 + FVG L+ N+ TL F+ + D++V+ D +TGRSRG+GFV+F ++Q AI Sbjct: 8 YRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIE 67 Query: 897 EMTGKWLGSRQIRCNWA 947 M GK L R I N A Sbjct: 68 NMNGKELDGRNITVNQA 84 Score = 33.9 bits (76), Expect = 2.4 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%) Frame = +3 Query: 1098 YVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGEAALAIQMAN 1265 +VG L N + L + F N G +V +E +GFGF+ +S+ AI+ N Sbjct: 11 FVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMN 70 Query: 1266 GLVVRGKPI 1292 G + G+ I Sbjct: 71 GKELDGRNI 79
>P39684:PES4_YEAST Protein PES4 - Saccharomyces cerevisiae (Baker's yeast)| Length = 611 Score = 62.4 bits (150), Expect = 6e-09 Identities = 52/192 (27%), Positives = 79/192 (41%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F+GDL V + TL F YPS A+V D+ T +S G+G+++F +++EAE A+ E+ Sbjct: 93 LFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYLNFEDKEEAEKAMEEL 152 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 + ++IR + + K N V +N P NNP Sbjct: 153 NYTKVNGKEIRIMPSLRNTTFRKNFGTN---VFFSN------------------LPLNNP 191 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 TT V D R+ G I ++ K GF+ + A I+M Sbjct: 192 LLTT--------RVFYDTFSRY------GKILSCKLDSRKDIGFVYFEDEKTARNVIKMY 237 Query: 1263 NGLVVRGKPIKC 1298 N GK I C Sbjct: 238 NNTSFFGKKILC 249 Score = 47.0 bits (110), Expect = 3e-04 Identities = 60/306 (19%), Positives = 117/306 (38%), Gaps = 16/306 (5%) Frame = +3 Query: 423 NGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKL----IRKEKSSFGFV 590 NG L F+ +++G++H VTE L +F+ K+ + K+ G++ Sbjct: 79 NGKLK-SFESKKLVPLFIGDLHETVTEETLKGIFKKYPSFVSAKVCLDSVTKKSLGHGYL 137 Query: 591 DYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDL---SSEVNDA 761 ++ D+ A A+ L+ + G+ I++ + +T G ++F +L + + Sbjct: 138 NFEDKEEAEKAMEELNYTKVNGKEIRIMPSLRNTTFRKNFG-TNVFFSNLPLNNPLLTTR 196 Query: 762 TLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCN 941 Y FS Y K + GFV F +++ A I ++I C Sbjct: 197 VFYDTFSRYGKILSC------KLDSRKDIGFVYFEDEKTARNVIKMYNNTSFFGKKILCG 250 Query: 942 WATKTNAE-----EKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVG 1106 E Q++ ++ S N D SK ++ + ++++ Sbjct: 251 IHFDKEVRSVPNFETQKSRLDAETIIEKEQSLNEKHSKGNDKESKNIYSSSQN--SIFIK 308 Query: 1107 NLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKG----FGFIRYSTHGEAALAIQMANGLV 1274 NL RD++ F VG I+ + + + F+ Y ++ AI+ N Sbjct: 309 NLPTITTRDDILNFFSE--VGPIKSIYLSNATKVKYLWAFVTYKNSSDSEKAIKRYNNFY 366 Query: 1275 VRGKPI 1292 RGK + Sbjct: 367 FRGKKL 372 Score = 42.4 bits (98), Expect = 0.007 Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 7/177 (3%) Frame = +3 Query: 453 STCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR--KEKSSFGFVDYYDQRSAALAI 626 S+ S+++ N+ T + ++ F GP++ L K K + FV Y + + AI Sbjct: 300 SSQNSIFIKNLPTITTRDDILNFFSEVGPIKSIYLSNATKVKYLWAFVTYKNSSDSEKAI 359 Query: 627 MTLHGRHIYGQAIKVNWASASTQRE---DTSGHFHIFVGDLSSEVNDATL-YACFSTYPS 794 + + G+ + V A +R ++ +F+ +LS+ N L Y C + Sbjct: 360 KRYNNFYFRGKKLLVTRAQDKEERAKFIESQKISTLFLENLSAVCNKEFLKYLCHQE--N 417 Query: 795 CSDARVMWDNKTGRSRGY-GFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNA 962 ++ D S Y GF+ FRN ++A + + +G + +W + NA Sbjct: 418 IRPFKIQIDGYDENSSTYSGFIKFRNFEDATRIFNFLNNRLVGGSIVTTSWERQNNA 474
>Q86U06:RBM23_HUMAN Probable RNA-binding protein 23 - Homo sapiens (Human)| Length = 439 Score = 62.0 bits (149), Expect = 8e-09 Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 13/194 (6%) Frame = +3 Query: 411 EPVSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----S 578 EPV N L P + R+V+ + + L + F G V ++I S Sbjct: 153 EPVDN--LSP--EERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKG 208 Query: 579 FGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQR---------EDTSGHFHIFV 731 +V++ + +S LAI L G+ + G I V + A R + G ++V Sbjct: 209 IAYVEFCEIQSVPLAI-GLTGQRLLGVPIIVQASQAEKNRLAAMANNLQKGNGGPMRLYV 267 Query: 732 GDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGK 911 G L + + L F + + +M D+ TGRS+GYGF++F + + A A+ ++ G Sbjct: 268 GSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGF 327 Query: 912 WLGSRQIRCNWATK 953 L R +R T+ Sbjct: 328 ELAGRPMRVGHVTE 341 Score = 47.0 bits (110), Expect = 3e-04 Identities = 45/195 (23%), Positives = 75/195 (38%), Gaps = 4/195 (2%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F L++ + L FS D R++ D + RS+G +V F Q AI Sbjct: 168 VFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLT 227 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 + LG I + AE+ + N + NGG Sbjct: 228 GQRLLGVPII----VQASQAEKNRLAAMANNLQKGNGGPMR------------------- 264 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALA 1250 +YVG+L + D L F G + +++ + KG+GFI +S A A Sbjct: 265 ----LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRA 320 Query: 1251 IQMANGLVVRGKPIK 1295 ++ NG + G+P++ Sbjct: 321 LEQLNGFELAGRPMR 335
>Q03878:GRP1_DAUCA Glycine-rich RNA-binding protein - Daucus carota (Carrot)| Length = 157 Score = 62.0 bits (149), Expect = 8e-09 Identities = 30/77 (38%), Positives = 47/77 (61%) Frame = +3 Query: 717 FHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIT 896 + FVG L+ ND +L FS + +D++++ D +TGRSRG+GFV+F++++ AI Sbjct: 6 YRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIE 65 Query: 897 EMTGKWLGSRQIRCNWA 947 M G+ L R I N A Sbjct: 66 GMNGQELDGRNITVNEA 82
>Q03251:GRP8_ARATH Glycine-rich RNA-binding protein 8 - Arabidopsis thaliana| (Mouse-ear cress) Length = 169 Score = 61.6 bits (148), Expect = 1e-08 Identities = 31/77 (40%), Positives = 46/77 (59%) Frame = +3 Query: 717 FHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIT 896 + FVG L+ ND L FS + D++++ D ++GRSRG+GFV+F++++ AI Sbjct: 6 YRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIE 65 Query: 897 EMTGKWLGSRQIRCNWA 947 EM GK L R I N A Sbjct: 66 EMNGKELDGRVITVNEA 82
>P23241:ELAV_DROVI Protein elav - Drosophila virilis (Fruit fly)| Length = 519 Score = 61.2 bits (147), Expect = 1e-08 Identities = 73/341 (21%), Positives = 133/341 (39%), Gaps = 58/341 (17%) Frame = +3 Query: 456 TCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS-----------------SFG 584 T ++ V + +TE+ + +F G +E KLIR + +G Sbjct: 183 TRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYIDPLNPQAPSKGQSLGYG 242 Query: 585 FVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDAT 764 FV+Y + A A+ L+G + + IKV++A S+ D +++V L + Sbjct: 243 FVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSS---DAIKGANLYVSGLPKTMTQQE 299 Query: 765 LYACFSTYPSCSDARVMWD-NKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGS------ 923 L A F+ + + +R++ + +++G GF+ F ++EA AI + G S Sbjct: 300 LEAIFAPFGAIITSRILQNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSCTDPIV 359 Query: 924 ---------------------------RQIRCNWATKTN---AEEKQETDNHNAVVLTNG 1013 R+I T N A + V+L NG Sbjct: 360 VKFSNTPGSTSKIIQPQLPAFLNPQLVRRIGGAMHTPVNKGLARFSPMAGDMLDVMLPNG 419 Query: 1014 GSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEE 1181 + AA +G +++ NL E L + F G V +++ Sbjct: 420 LGAAAAAATTLASGP-------GGAYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKD 472 Query: 1182 VRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 Q KG+GF+ + + EAA+AI+ NG + + ++ S+ Sbjct: 473 PTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSF 513 Score = 57.8 bits (138), Expect = 2e-07 Identities = 28/91 (30%), Positives = 50/91 (54%) Frame = +3 Query: 678 ASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFV 857 A+A+T G + IF+ +L+ E +A L+ F + + +++ D T + +GYGFV Sbjct: 425 AAATTLASGPGGAYPIFIYNLAPETEEAALWQLFGPFGAVQSVKIVKDPTTNQCKGYGFV 484 Query: 858 SFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 S N EA AI + G +G+R ++ ++ T Sbjct: 485 SMTNYDEAAMAIRALNGYTMGNRVLQVSFKT 515 Score = 38.1 bits (87), Expect = 0.13 Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 19/119 (15%) Frame = +3 Query: 1005 TNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEV 1184 TNG S A +N T ++ N + V L + DE+ F + VG IE V Sbjct: 166 TNGNSGGAQNGSNGSTETRTN---------LIVNYLPQTMTEDEIRSLFSS--VGEIESV 214 Query: 1185 RVQQEK-------------------GFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 ++ ++K G+GF+ Y +A A+ + NGL ++ K IK S+ Sbjct: 215 KLIRDKSQVYIDPLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSF 273
>P25299:RNA15_YEAST mRNA 3'-end-processing protein RNA15 - Saccharomyces cerevisiae| (Baker's yeast) Length = 296 Score = 60.8 bits (146), Expect = 2e-08 Identities = 31/124 (25%), Positives = 65/124 (52%), Gaps = 2/124 (1%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +++G + + + + S + ++M+D +TGRS+GY F+ FR+ + + +A+ + Sbjct: 20 VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVRNL 79 Query: 903 TGKWLGSRQIRCNWATKTNAE--EKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPEN 1076 G LGSR ++C +++ ++ +Q+ +N + NG ++N G+ N N Sbjct: 80 NGYQLGSRFLKCGYSSNSDISGVSQQQQQQYNNI---NGNNNN--------NGNNNNNSN 128 Query: 1077 NPDF 1088 PDF Sbjct: 129 GPDF 132 Score = 38.5 bits (88), Expect = 0.098 Identities = 20/94 (21%), Positives = 47/94 (50%), Gaps = 4/94 (4%) Frame = +3 Query: 1041 NQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGF 1208 N+ +G +NNP VY+G++ ++ +++ N+G + + + + + KG+ Sbjct: 2 NRQSGVNAGVQNNPPSRVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGY 61 Query: 1209 GFIRYSTHGEAALAIQMANGLVVRGKPIKCSWGN 1310 FI + +A A++ NG + + +KC + + Sbjct: 62 AFIEFRDLESSASAVRNLNGYQLGSRFLKCGYSS 95 Score = 38.1 bits (87), Expect = 0.13 Identities = 20/80 (25%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLI----RKEKSSFGFVDYYDQRSAALAIM 629 R VY+G++ + TE ++++ GPV K++ + F+++ D S+A A+ Sbjct: 18 RVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 77 Query: 630 TLHGRHIYGQAIKVNWASAS 689 L+G + + +K ++S S Sbjct: 78 NLNGYQLGSRFLKCGYSSNS 97
>P49310:GRP1_SINAL Glycine-rich RNA-binding protein GRP1A - Sinapis alba (White| mustard) (Brassica hirta) Length = 166 Score = 60.5 bits (145), Expect = 2e-08 Identities = 30/77 (38%), Positives = 46/77 (59%) Frame = +3 Query: 717 FHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIT 896 + FVG L+ +D L FS Y D++++ D +TGRSRG+GFV+F++++ + AI Sbjct: 8 YRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67 Query: 897 EMTGKWLGSRQIRCNWA 947 M G+ L R I N A Sbjct: 68 GMNGQDLDGRSITVNEA 84
>P38159:HNRPG_HUMAN Heterogeneous nuclear ribonucleoprotein G - Homo sapiens (Human)| Length = 391 Score = 59.7 bits (143), Expect = 4e-08 Identities = 29/81 (35%), Positives = 47/81 (58%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F+G L++E N+ L A F Y + +M D +T +SRG+ FV+F + +A+ A +M Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDM 69 Query: 903 TGKWLGSRQIRCNWATKTNAE 965 GK L + I+ ATK + E Sbjct: 70 NGKSLDGKAIKVEQATKPSFE 90
>P39697:RT19_ARATH 40S ribosomal protein S19, mitochondrial precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 212 Score = 59.3 bits (142), Expect = 5e-08 Identities = 30/75 (40%), Positives = 47/75 (62%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +++G LS ++ +L FS++ ++ARVM + TGRSRGYGFV+F ++ A +AI+ M Sbjct: 33 LYIGGLSPGTDEHSLKDAFSSFNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAM 92 Query: 903 TGKWLGSRQIRCNWA 947 G+ L I N A Sbjct: 93 NGQELNGFNISVNVA 107
>Q5RF26:NUCL_PONPY Nucleolin - Pongo pygmaeus (Orangutan)| Length = 712 Score = 58.9 bits (141), Expect = 7e-08 Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 6/168 (3%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHG 641 +++ + N+ + TE L EVF+ + ++ + + + F+++ A A+ + + Sbjct: 488 KTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNK 547 Query: 642 RHIYGQAIKVNWA------SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSD 803 R I G+AI++ +A +Q T +FV LS + + TL F Sbjct: 548 REIEGRAIRLELQGPRGSPNARSQPSKT-----LFVKGLSEDTTEETLKESFD---GSVR 599 Query: 804 ARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 AR++ D +TG S+G+GFV F ++++A+ A M + ++ +WA Sbjct: 600 ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 647 Score = 51.6 bits (122), Expect = 1e-05 Identities = 58/292 (19%), Positives = 115/292 (39%), Gaps = 7/292 (2%) Frame = +3 Query: 441 GFDPSTCRSVYVGNVHPNVT----ENLLIEVFQGSGPV---ERCKLIRKEKSSFGFVDYY 599 G +P+T +++VGN++ N + + + +VF + R + RK FG+VD+ Sbjct: 302 GTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMTRK----FGYVDFE 357 Query: 600 DQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACF 779 A + L G ++G IK+ +++ + +L +V L F Sbjct: 358 SAEDLEKA-LELTGLKVFGNEIKLEKPKGKDSKKERDAR-TLLAKNLPYKVTQDELKEVF 415 Query: 780 STYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTN 959 A + +K G+S+G ++ F+ + +AE E G + R I + Sbjct: 416 E-----DAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYY----T 466 Query: 960 AEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDEL 1139 E+ Q NQD +N + + T+ + NL + + L Sbjct: 467 GEKGQ----------------------NQDYRGGKNSTWSGESKTLVLSNLSYSATEETL 504 Query: 1140 HRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 F + + + + KG+ FI +++ +A A+ N + G+ I+ Sbjct: 505 QEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIR 556 Score = 50.4 bits (119), Expect = 3e-05 Identities = 55/293 (18%), Positives = 112/293 (38%), Gaps = 12/293 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFG--FVDYYDQRSAALAIMTL 635 R++ N+ VT++ L EVF+ + + +L+ K+ S G ++++ + A Sbjct: 395 RTLLAKNLPYKVTQDELKEVFEDAAEI---RLVSKDGKSKGIAYIEFKTEADAEKTFEEK 451 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGHFH---------IFVGDLSSEVNDATLYACFSTY 788 G I G++I + + Q +D G + + + +LS + TL F Sbjct: 452 QGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKA 511 Query: 789 PSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEE 968 + N+ G+S+GY F+ F + ++A+ A+ + + R IR Sbjct: 512 TFIKVPQ----NQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPR---- 563 Query: 969 KQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRH 1148 GS NA + ++ T++V L + + L Sbjct: 564 ---------------GSPNARSQPSK---------------TLFVKGLSEDTTEETLKES 593 Query: 1149 FY-NLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 F ++ + + KGFGF+ +++ +A A + + G + W Sbjct: 594 FDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDW 646
>Q4R4J7:NUCL_MACFA Nucleolin - Macaca fascicularis (Crab eating macaque) (Cynomolgus| monkey) Length = 711 Score = 58.9 bits (141), Expect = 7e-08 Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 6/168 (3%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHG 641 +++ + N+ + TE L EVF+ + ++ + + + F+++ A A+ + + Sbjct: 487 KTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNK 546 Query: 642 RHIYGQAIKVNWA------SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSD 803 R I G+AI++ +A +Q T +FV LS + + TL F Sbjct: 547 REIEGRAIRLELQGPRGSPNARSQPSKT-----LFVKGLSEDTTEETLKESFD---GSVR 598 Query: 804 ARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 AR++ D +TG S+G+GFV F ++++A+ A M + ++ +WA Sbjct: 599 ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 646 Score = 51.6 bits (122), Expect = 1e-05 Identities = 58/292 (19%), Positives = 115/292 (39%), Gaps = 7/292 (2%) Frame = +3 Query: 441 GFDPSTCRSVYVGNVHPNVT----ENLLIEVFQGSGPV---ERCKLIRKEKSSFGFVDYY 599 G +P+T +++VGN++ N + + + +VF + R + RK FG+VD+ Sbjct: 301 GTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMTRK----FGYVDFE 356 Query: 600 DQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACF 779 A + L G ++G IK+ +++ + +L +V L F Sbjct: 357 SAEDLEKA-LELTGLKVFGNEIKLEKPKGKDSKKERDAR-TLLAKNLPYKVTQDELKEVF 414 Query: 780 STYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTN 959 A + +K G+S+G ++ F+ + +AE E G + R I + Sbjct: 415 E-----DAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYY----T 465 Query: 960 AEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDEL 1139 E+ Q NQD +N + + T+ + NL + + L Sbjct: 466 GEKGQ----------------------NQDYRGGKNSTWSGESKTLVLSNLSYSATEETL 503 Query: 1140 HRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 F + + + + KG+ FI +++ +A A+ N + G+ I+ Sbjct: 504 QEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIR 555 Score = 50.4 bits (119), Expect = 3e-05 Identities = 55/293 (18%), Positives = 112/293 (38%), Gaps = 12/293 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFG--FVDYYDQRSAALAIMTL 635 R++ N+ VT++ L EVF+ + + +L+ K+ S G ++++ + A Sbjct: 394 RTLLAKNLPYKVTQDELKEVFEDAAEI---RLVSKDGKSKGIAYIEFKTEADAEKTFEEK 450 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGHFH---------IFVGDLSSEVNDATLYACFSTY 788 G I G++I + + Q +D G + + + +LS + TL F Sbjct: 451 QGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKA 510 Query: 789 PSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEE 968 + N+ G+S+GY F+ F + ++A+ A+ + + R IR Sbjct: 511 TFIKVPQ----NQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPR---- 562 Query: 969 KQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRH 1148 GS NA + ++ T++V L + + L Sbjct: 563 ---------------GSPNARSQPSK---------------TLFVKGLSEDTTEETLKES 592 Query: 1149 FY-NLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 F ++ + + KGFGF+ +++ +A A + + G + W Sbjct: 593 FDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDW 645
>P19338:NUCL_HUMAN Nucleolin - Homo sapiens (Human)| Length = 710 Score = 58.9 bits (141), Expect = 7e-08 Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 6/168 (3%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHG 641 +++ + N+ + TE L EVF+ + ++ + + + F+++ A A+ + + Sbjct: 486 KTLVLSNLSYSATEETLQEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNK 545 Query: 642 RHIYGQAIKVNWA------SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSD 803 R I G+AI++ +A +Q T +FV LS + + TL F Sbjct: 546 REIEGRAIRLELQGPRGSPNARSQPSKT-----LFVKGLSEDTTEETLKESFD---GSVR 597 Query: 804 ARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 AR++ D +TG S+G+GFV F ++++A+ A M + ++ +WA Sbjct: 598 ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 645 Score = 51.6 bits (122), Expect = 1e-05 Identities = 58/292 (19%), Positives = 115/292 (39%), Gaps = 7/292 (2%) Frame = +3 Query: 441 GFDPSTCRSVYVGNVHPNVT----ENLLIEVFQGSGPV---ERCKLIRKEKSSFGFVDYY 599 G +P+T +++VGN++ N + + + +VF + R + RK FG+VD+ Sbjct: 300 GTEPTTAFNLFVGNLNFNKSAPELKTGISDVFAKNDLAVVDVRIGMTRK----FGYVDFE 355 Query: 600 DQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACF 779 A + L G ++G IK+ +++ + +L +V L F Sbjct: 356 SAEDLEKA-LELTGLKVFGNEIKLEKPKGKDSKKERDAR-TLLAKNLPYKVTQDELKEVF 413 Query: 780 STYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTN 959 A + +K G+S+G ++ F+ + +AE E G + R I + Sbjct: 414 E-----DAAEIRLVSKDGKSKGIAYIEFKTEADAEKTFEEKQGTEIDGRSISLYY----T 464 Query: 960 AEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDEL 1139 E+ Q NQD +N + + T+ + NL + + L Sbjct: 465 GEKGQ----------------------NQDYRGGKNSTWSGESKTLVLSNLSYSATEETL 502 Query: 1140 HRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 F + + + + KG+ FI +++ +A A+ N + G+ I+ Sbjct: 503 QEVFEKATFIKVPQNQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIR 554 Score = 50.4 bits (119), Expect = 3e-05 Identities = 55/293 (18%), Positives = 112/293 (38%), Gaps = 12/293 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFG--FVDYYDQRSAALAIMTL 635 R++ N+ VT++ L EVF+ + + +L+ K+ S G ++++ + A Sbjct: 393 RTLLAKNLPYKVTQDELKEVFEDAAEI---RLVSKDGKSKGIAYIEFKTEADAEKTFEEK 449 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGHFH---------IFVGDLSSEVNDATLYACFSTY 788 G I G++I + + Q +D G + + + +LS + TL F Sbjct: 450 QGTEIDGRSISLYYTGEKGQNQDYRGGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKA 509 Query: 789 PSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEE 968 + N+ G+S+GY F+ F + ++A+ A+ + + R IR Sbjct: 510 TFIKVPQ----NQNGKSKGYAFIEFASFEDAKEALNSCNKREIEGRAIRLELQGPR---- 561 Query: 969 KQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRH 1148 GS NA + ++ T++V L + + L Sbjct: 562 ---------------GSPNARSQPSK---------------TLFVKGLSEDTTEETLKES 591 Query: 1149 FY-NLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 F ++ + + KGFGF+ +++ +A A + + G + W Sbjct: 592 FDGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDW 644
>Q29RT0:HNRPG_BOVIN Heterogeneous nuclear ribonucleoprotein G - Bos taurus (Bovine)| Length = 396 Score = 58.9 bits (141), Expect = 7e-08 Identities = 27/77 (35%), Positives = 47/77 (61%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F+G L+ E ++ +L A F Y S+ +M D +T +SRG+ F++F + +A+ A+ +M Sbjct: 10 LFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDM 69 Query: 903 TGKWLGSRQIRCNWATK 953 GK L + I+ ATK Sbjct: 70 NGKSLDGKAIKVAQATK 86
>P10979:GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein - Zea| mays (Maize) Length = 157 Score = 58.9 bits (141), Expect = 7e-08 Identities = 30/77 (38%), Positives = 45/77 (58%) Frame = +3 Query: 717 FHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIT 896 + FVG L+ ++ +L F++Y D++V+ D +TGRSRG+GFV+F ++ AI Sbjct: 8 YRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIE 67 Query: 897 EMTGKWLGSRQIRCNWA 947 M GK L R I N A Sbjct: 68 NMNGKELDGRNITVNQA 84
>Q03250:GRP7_ARATH Glycine-rich RNA-binding protein 7 - Arabidopsis thaliana| (Mouse-ear cress) Length = 176 Score = 58.9 bits (141), Expect = 7e-08 Identities = 29/77 (37%), Positives = 46/77 (59%) Frame = +3 Query: 717 FHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIT 896 + FVG L+ +D L F+ Y D++++ D +TGRSRG+GFV+F++++ + AI Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67 Query: 897 EMTGKWLGSRQIRCNWA 947 M G+ L R I N A Sbjct: 68 GMNGQDLDGRSITVNEA 84
>P48809:RB27C_DROME Heterogeneous nuclear ribonucleoprotein 27C - Drosophila| melanogaster (Fruit fly) Length = 421 Score = 58.5 bits (140), Expect = 9e-08 Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 6/179 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMTL 635 ++VG + T+ L F G + C +++ +S FGFV + D + + Sbjct: 9 LFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ-- 66 Query: 636 HGRH-IYGQAIKVNWASAST-QREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDAR 809 +G H + G+ I + T Q+ G + +F+G L S V + L F+ Y ++ Sbjct: 67 NGPHTLDGRTIDPKPCNPRTLQKPKKGGGYKVFLGGLPSNVTETDLRTFFNRYGKVTEVV 126 Query: 810 VMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDN 986 +M+D + +SRG+GF+SF + E E L +Q+ A + Q ++N Sbjct: 127 IMYDQEKKKSRGFGFLSFEEESSVEHVTNERYIN-LNGKQVEIKKAEPRDGSGGQNSNN 184
>P98179:RBM3_HUMAN Putative RNA-binding protein 3 - Homo sapiens (Human)| Length = 157 Score = 58.2 bits (139), Expect = 1e-07 Identities = 30/78 (38%), Positives = 47/78 (60%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG L+ ++ L FS++ S+ V+ D +T RSRG+GF++F N + A A+ M Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAM 67 Query: 903 TGKWLGSRQIRCNWATKT 956 G+ L RQIR + A K+ Sbjct: 68 NGESLDGRQIRVDHAGKS 85 Score = 39.7 bits (91), Expect = 0.044 Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 4/71 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 ++VG L + L HF + G V +++ Q+ +GFGFI ++ A++A++ Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAM 67 Query: 1263 NGLVVRGKPIK 1295 NG + G+ I+ Sbjct: 68 NGESLDGRQIR 78 Score = 39.3 bits (90), Expect = 0.058 Identities = 19/80 (23%), Positives = 43/80 (53%), Gaps = 4/80 (5%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----SFGFVDYYDQRSAALAIMTL 635 ++VG ++ N E L + F GP+ +++ ++ FGF+ + + A++A+ + Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAM 67 Query: 636 HGRHIYGQAIKVNWASASTQ 695 +G + G+ I+V+ A S + Sbjct: 68 NGESLDGRQIRVDHAGKSAR 87
>Q9Y4C8:RBM19_HUMAN Probable RNA-binding protein 19 - Homo sapiens (Human)| Length = 960 Score = 58.2 bits (139), Expect = 1e-07 Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 21/182 (11%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS-------FGFVDYYDQRSAALA 623 ++++ N++ + TE L EVF G V+ C + +K+ + FGFV+Y A A Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790 Query: 624 IMTLHGRHIYGQAIKVNWASASTQ------------REDTSGHFHIFVGDLSSEVNDATL 767 + L G + G ++V + +T+ R+ T+ I V ++ + + + Sbjct: 791 LKQLQGHVVDGHKLEVRISERATKPAVTLARKKQVPRKQTTSK--ILVRNIPFQAHSREI 848 Query: 768 YACFSTYPSCSDARVMWD-NKTGRSRGYGFVSFRNQQEAETAITEMT-GKWLGSRQIRCN 941 FST+ R+ TG RG+GFV F +Q+A+ A + L R++ Sbjct: 849 RELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKRAFNALCHSTHLYGRRLVLE 908 Query: 942 WA 947 WA Sbjct: 909 WA 910 Score = 48.1 bits (113), Expect = 1e-04 Identities = 52/245 (21%), Positives = 107/245 (43%), Gaps = 25/245 (10%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGFVDYYDQRSAA 617 +P+TC +V + NVTE ++E PV +++R K+ + FVD+ ++ Sbjct: 289 EPTTCHTVKLRGAPFNVTEKNVMEFLAPLKPV-AIRIVRNAHGNKTGYIFVDFSNEEEVK 347 Query: 618 LAIMTLHGRHIYGQAIKV------------------NW----ASASTQREDTSGHFHIFV 731 A + + ++ G+ I+V +W + + ED + +FV Sbjct: 348 QA-LKCNREYMGGRYIEVFREKNVPTTKGAPKNTTKSWQGRILGENEEEEDLAESGRLFV 406 Query: 732 GDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGK 911 +L + L FS Y S+ D+ T + +G+ F++F + A A +E+ G+ Sbjct: 407 RNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFITFMFPEHAVKAYSEVDGQ 466 Query: 912 WLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFT 1091 R + + +K+ +++ +A+ G SS + QD K N ++ ++ Sbjct: 467 VFQGRMLH----VLPSTIKKEASEDASAL----GSSSYKKKKEAQD---KANSASSHNWN 515 Query: 1092 TVYVG 1106 T+++G Sbjct: 516 TLFMG 520 Score = 42.4 bits (98), Expect = 0.007 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 10/99 (10%) Frame = +3 Query: 456 TCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS-----FGFVDYYDQRSAAL 620 T + V N+ + E+F G ++ +L +K + FGFVD+ ++ A Sbjct: 830 TTSKILVRNIPFQAHSREIRELFSTFGELKTVRLPKKMTGTGTHRGFGFVDFLTKQDAKR 889 Query: 621 AIMTL-HGRHIYGQAIKVNWASASTQ----REDTSGHFH 722 A L H H+YG+ + + WA + R T+ HFH Sbjct: 890 AFNALCHSTHLYGRRLVLEWADSEVTLQALRRKTAAHFH 928
>O89086:RBM3_MOUSE Putative RNA-binding protein 3 - Mus musculus (Mouse)| Length = 153 Score = 57.8 bits (138), Expect = 2e-07 Identities = 30/78 (38%), Positives = 47/78 (60%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG L+ ++ L FS++ S+ V+ D +T RSRG+GF++F N + A A+ M Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67 Query: 903 TGKWLGSRQIRCNWATKT 956 G+ L RQIR + A K+ Sbjct: 68 NGESLDGRQIRVDHAGKS 85 Score = 37.7 bits (86), Expect = 0.17 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 ++VG L + L HF + G V +++ Q+ +GFGFI ++ A+ A++ Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67 Query: 1263 NGLVVRGKPIK 1295 NG + G+ I+ Sbjct: 68 NGESLDGRQIR 78 Score = 37.4 bits (85), Expect = 0.22 Identities = 19/80 (23%), Positives = 42/80 (52%), Gaps = 4/80 (5%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----SFGFVDYYDQRSAALAIMTL 635 ++VG ++ N E L + F GP+ +++ ++ FGF+ + + A+ A+ + Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67 Query: 636 HGRHIYGQAIKVNWASASTQ 695 +G + G+ I+V+ A S + Sbjct: 68 NGESLDGRQIRVDHAGKSAR 87
>P84586:HNRPG_RAT Heterogeneous nuclear ribonucleoprotein G - Rattus norvegicus (Rat)| Length = 388 Score = 57.8 bits (138), Expect = 2e-07 Identities = 28/81 (34%), Positives = 46/81 (56%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F+G L++E N+ L A F Y + +M D +T +SRG+ FV+F + +A+ +M Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDM 69 Query: 903 TGKWLGSRQIRCNWATKTNAE 965 GK L + I+ ATK + E Sbjct: 70 NGKSLDGKAIKVEQATKPSFE 90
>P49311:GRP2_SINAL Glycine-rich RNA-binding protein GRP2A - Sinapis alba (White| mustard) (Brassica hirta) Length = 169 Score = 57.8 bits (138), Expect = 2e-07 Identities = 28/77 (36%), Positives = 47/77 (61%) Frame = +3 Query: 717 FHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIT 896 + FVG L+ ++ +L FS + D++++ D +TGRSRG+GFV+F++++ + AI Sbjct: 8 YRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67 Query: 897 EMTGKWLGSRQIRCNWA 947 M G+ L R I N A Sbjct: 68 GMNGQDLDGRSITVNEA 84
>Q8R3C6:RBM19_MOUSE Probable RNA-binding protein 19 - Mus musculus (Mouse)| Length = 952 Score = 57.4 bits (137), Expect = 2e-07 Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 19/180 (10%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS-------FGFVDYYDQRSAALA 623 ++++ N++ + TE L VF G ++ C + +K+ + FGFV+Y A A Sbjct: 723 TLFIKNLNFSTTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKA 782 Query: 624 IMTLHGRHIYGQAIKVNWASASTQREDTSGH----------FHIFVGDLSSEVNDATLYA 773 + L G + G ++V + +T+ TS I V ++ + N + Sbjct: 783 LKQLQGHTVDGHKLEVRISERATKPALTSTRKKQVPKKQTTSKILVRNIPFQANQREIRE 842 Query: 774 CFSTYPSCSDARVMWD-NKTGRSRGYGFVSFRNQQEAETAITEMT-GKWLGSRQIRCNWA 947 FST+ R+ TG RG+GFV F +Q+A+ A + L R++ WA Sbjct: 843 LFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKKAFNALCHSTHLYGRRLVLEWA 902 Score = 41.6 bits (96), Expect = 0.012 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 10/98 (10%) Frame = +3 Query: 456 TCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS-----FGFVDYYDQRSAAL 620 T + V N+ + + E+F G ++ +L +K + FGFVD+ ++ A Sbjct: 822 TTSKILVRNIPFQANQREIRELFSTFGELKTVRLPKKMTGTGAHRGFGFVDFITKQDAKK 881 Query: 621 AIMTL-HGRHIYGQAIKVNWA----SASTQREDTSGHF 719 A L H H+YG+ + + WA + T R T+ HF Sbjct: 882 AFNALCHSTHLYGRRLVLEWADSEVTVQTLRRKTARHF 919
>Q8T6B9:PUF68_DROME Poly U-binding-splicing factor half pint - Drosophila melanogaster| (Fruit fly) Length = 637 Score = 57.4 bits (137), Expect = 2e-07 Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 12/171 (7%) Frame = +3 Query: 459 CRSVYVGNVHPNVTENLLIEVFQGSGPVERCKL----IRKEKSSFGFVDYYDQRSAALAI 626 CR VYVG++ + E+ + F GP++ + I ++ F FV+Y A LA+ Sbjct: 130 CR-VYVGSISFELKEDTIRVAFTPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLAL 188 Query: 627 MTLHGRHIYGQAIKVNWASASTQ--------REDTSGHFHIFVGDLSSEVNDATLYACFS 782 ++G + G+ IKV S Q +E+ I+V + ++++ + + F Sbjct: 189 EQMNGALMGGRNIKVGRPSNMPQAQQVIDEVQEEAKSFNRIYVASIHPDLSEEDIKSVFE 248 Query: 783 TYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIR 935 + ++ +GYGF+ + N+Q + AI M LG + +R Sbjct: 249 AFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASMNLFDLGGQLLR 299 Score = 43.1 bits (100), Expect = 0.004 Identities = 20/72 (27%), Positives = 43/72 (59%), Gaps = 4/72 (5%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMTL 635 +YV ++HP+++E + VF+ GP+ CKL + +GF++Y ++++ AI ++ Sbjct: 229 IYVASIHPDLSEEDIKSVFEAFGPILYCKLAQGTSLHTHKGYGFIEYANKQAMDEAIASM 288 Query: 636 HGRHIYGQAIKV 671 + + GQ ++V Sbjct: 289 NLFDLGGQLLRV 300
>Q99383:HRP1_YEAST Nuclear polyadenylated RNA-binding protein 4 - Saccharomyces| cerevisiae (Baker's yeast) Length = 534 Score = 57.4 bits (137), Expect = 2e-07 Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 4/215 (1%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMTL 635 +++G ++ + TE+ L E F G V K+++ + FGF+ + S + T Sbjct: 161 MFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVKTQ 220 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVM 815 H + G+ I A +++ T IFVG + +V FS + + DA++M Sbjct: 221 H--ILDGKVIDPKRAIPRDEQDKTG---KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLM 275 Query: 816 WDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNA 995 D TG+SRG+GFV++ A+ K++ + E K+ H Sbjct: 276 LDKDTGQSRGFGFVTY---DSADAVDRVCQNKFIDFKD--------RKIEIKRAEPRHMQ 324 Query: 996 VVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVY 1100 +N G +N N+ G N N DF +Y Sbjct: 325 QKSSNNGGNNGGNNMNRRGG---NFGNQGDFNQMY 356
>Q13151:ROA0_HUMAN Heterogeneous nuclear ribonucleoprotein A0 - Homo sapiens (Human)| Length = 305 Score = 57.0 bits (136), Expect = 3e-07 Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 7/148 (4%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLI----RKEKSSFGFVDYYDQRSAALAIMTL 635 +++G ++ +E+ L F+ G + C ++ K FGFV Y + A A M Sbjct: 9 LFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAA-MAA 67 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGHFHI---FVGDLSSEVNDATLYACFSTYPSCSDA 806 + G +++ A + H + FVG L +V + L FS + + A Sbjct: 68 SPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKA 127 Query: 807 RVMWDNKTGRSRGYGFVSFRNQQEAETA 890 ++ D ++G+ RG+GFV F+N A+ A Sbjct: 128 EIIADKQSGKKRGFGFVYFQNHDAADKA 155 Score = 47.0 bits (110), Expect = 3e-04 Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 4/177 (2%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F+G L+ + +++ L F + + +D V+ + +T RSR +GFV++ N +EA+ A+ Sbjct: 9 LFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAM--- 65 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 A +A + + AV + +D+ P + Sbjct: 66 --------------AASPHAVDGNTVELKRAV-------------SREDSA---RPGAHA 95 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGEA 1241 ++VG L +V +L HF G E+ ++ +GFGF+ + H A Sbjct: 96 KVKKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAA 152 Score = 34.3 bits (77), Expect = 1.9 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 4/77 (5%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----SFGFVDYYDQRSAALAIM 629 + ++VG + +V E LIE F G VE+ ++I ++S FGFV Y+ AA Sbjct: 98 KKLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFV-YFQNHDAADKAA 156 Query: 630 TLHGRHIYGQAIKVNWA 680 + I G ++V A Sbjct: 157 VVKFHPIQGHRVEVKKA 173
>P09405:NUCL_MOUSE Nucleolin - Mus musculus (Mouse)| Length = 707 Score = 57.0 bits (136), Expect = 3e-07 Identities = 35/162 (21%), Positives = 81/162 (50%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHG 641 +++ + N+ + T+ L EVF+ + ++ + + + F+++ A A+ + + Sbjct: 487 KTLVLSNLSYSATKETLEEVFEKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCNK 546 Query: 642 RHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWD 821 I G+ I++ ++++ + + +FV LS + + TL F AR++ D Sbjct: 547 MEIEGRTIRLELQGSNSRSQPSKT---LFVKGLSEDTTEETLKESFE---GSVRARIVTD 600 Query: 822 NKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 +TG S+G+GFV F ++++A+ A M + ++ +WA Sbjct: 601 RETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 642 Score = 52.8 bits (125), Expect = 5e-06 Identities = 53/288 (18%), Positives = 113/288 (39%), Gaps = 3/288 (1%) Frame = +3 Query: 441 GFDPSTCRSVYVGNVHPNVTENLL---IEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRS 611 G +P+T ++++GN++PN + N L I + + FG+VD+ Sbjct: 302 GSEPTTPFNLFIGNLNPNKSVNELKFAISELFAKNDLAVVDVRTGTNRKFGYVDFESAED 361 Query: 612 AALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYP 791 A + L G ++G IK+ ++ + + +LS + + L F Sbjct: 362 LEKA-LELTGLKVFGNEIKLEKPKGRDSKKVRAAR-TLLAKNLSFNITEDELKEVFE--- 416 Query: 792 SCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEK 971 + R++ ++ G+S+G ++ F+++ +AE + E G + R + + EK Sbjct: 417 DAMEIRLV--SQDGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYY-----TGEK 469 Query: 972 QETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHF 1151 + T G S T+ + NL + ++ L F Sbjct: 470 GQRQERTGKTSTWSGESK----------------------TLVLSNLSYSATKETLEEVF 507 Query: 1152 YNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 + + + KG+ FI +++ +A A+ N + + G+ I+ Sbjct: 508 EKATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCNKMEIEGRTIR 555
>Q9IBD0:CELF1_DANRE CUG-BP- and ETR-3-like factor 1 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 501 Score = 57.0 bits (136), Expect = 3e-07 Identities = 42/152 (27%), Positives = 71/152 (46%), Gaps = 7/152 (4%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK------EKSSFGFVDYYDQRSAALAIM 629 ++VG + +E+ L E+F+ G V ++R + FV YY ++SA A Sbjct: 18 MFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCFVTYYTRKSALEAQN 77 Query: 630 TLHGRHIY-GQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDA 806 LH I G + A +++ + +FVG +S + N+ + FS Y + Sbjct: 78 ALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFVGMISKKCNENDIRLMFSPYGQIEEC 137 Query: 807 RVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 R++ G SRG FV+F +Q A++AI M Sbjct: 138 RIL-RGPDGLSRGCAFVTFTARQMAQSAIKSM 168
>Q5M9F1:RBM34_RAT RNA-binding protein 34 - Rattus norvegicus (Rat)| Length = 428 Score = 56.6 bits (135), Expect = 3e-07 Identities = 55/223 (24%), Positives = 96/223 (43%), Gaps = 21/223 (9%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCK-----------------LIRK----EKSS 578 R+V+VGN+ + L F+ G VE + + RK +KS Sbjct: 183 RTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLSKKLAAIKRKFHPDQKSI 242 Query: 579 FGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVND 758 +V + ++R+AA A+ + G I+V+ AS + R+ S +FVG+L V++ Sbjct: 243 NAYVVFKEERAAAKALQRNGAQIAEGFRIRVDLASETASRDKRS----VFVGNLPYRVDE 298 Query: 759 ATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRC 938 + L F S R++ + TG RG+G+V F N A+ ++ L R++R Sbjct: 299 SALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLAL-KLNNSELMGRKLR- 356 Query: 939 NWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKEN 1067 ++ +EK + N N V +G S + G + Sbjct: 357 --VMRSVNKEKLKQQNSNPSVKKDGSKSKQRLNFTSKEGKSHS 397 Score = 35.8 bits (81), Expect = 0.64 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%) Frame = +3 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE------KGFGFIRYSTHGEAA 1244 D +V+VGNL + V+ L HF L G+I VR+ + +GFG++ + Sbjct: 283 DKRSVFVGNLPYRVDESALEEHF--LDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVH 340 Query: 1245 LAIQMAN 1265 LA+++ N Sbjct: 341 LALKLNN 347
>Q5RDA3:CSTF2_PONPY Cleavage stimulation factor 64 kDa subunit - Pongo pygmaeus| (Orangutan) Length = 577 Score = 56.6 bits (135), Expect = 3e-07 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 4/93 (4%) Frame = +3 Query: 438 PGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQ 605 P D S RSV+VGN+ TE L ++F GPV +L+ ++ +GF +Y DQ Sbjct: 9 PAVDRSL-RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67 Query: 606 RSAALAIMTLHGRHIYGQAIKVNWASASTQRED 704 +A A+ L+GR G+A++V+ A++ +E+ Sbjct: 68 ETALSAMRNLNGREFSGRALRVDNAASEKNKEE 100 Score = 51.6 bits (122), Expect = 1e-05 Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG++ E + L FS R+++D +TG+ +GYGF +++Q+ A +A+ + Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 903 TGKWLGSRQIRC-NWATKTNAEE 968 G+ R +R N A++ N EE Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>Q8BIQ5:CSTF2_MOUSE Cleavage stimulation factor 64 kDa subunit - Mus musculus (Mouse)| Length = 580 Score = 56.6 bits (135), Expect = 3e-07 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 4/93 (4%) Frame = +3 Query: 438 PGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQ 605 P D S RSV+VGN+ TE L ++F GPV +L+ ++ +GF +Y DQ Sbjct: 9 PAVDRSL-RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67 Query: 606 RSAALAIMTLHGRHIYGQAIKVNWASASTQRED 704 +A A+ L+GR G+A++V+ A++ +E+ Sbjct: 68 ETALSAMRNLNGREFSGRALRVDNAASEKNKEE 100 Score = 52.8 bits (125), Expect = 5e-06 Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 1/107 (0%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG++ E + L FS R+++D +TG+ +GYGF +++Q+ A +A+ + Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 903 TGKWLGSRQIRC-NWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEA 1040 G+ R +R N A++ N EE + V+ + G S + +A Sbjct: 78 NGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGESISPEDA 124
>P33240:CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit - Homo sapiens (Human)| Length = 577 Score = 56.6 bits (135), Expect = 3e-07 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 4/93 (4%) Frame = +3 Query: 438 PGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQ 605 P D S RSV+VGN+ TE L ++F GPV +L+ ++ +GF +Y DQ Sbjct: 9 PAVDRSL-RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67 Query: 606 RSAALAIMTLHGRHIYGQAIKVNWASASTQRED 704 +A A+ L+GR G+A++V+ A++ +E+ Sbjct: 68 ETALSAMRNLNGREFSGRALRVDNAASEKNKEE 100 Score = 51.6 bits (122), Expect = 1e-05 Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG++ E + L FS R+++D +TG+ +GYGF +++Q+ A +A+ + Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 903 TGKWLGSRQIRC-NWATKTNAEE 968 G+ R +R N A++ N EE Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>Q8HXM1:CSTF2_BOVIN Cleavage stimulation factor 64 kDa subunit - Bos taurus (Bovine)| Length = 572 Score = 56.6 bits (135), Expect = 3e-07 Identities = 32/93 (34%), Positives = 53/93 (56%), Gaps = 4/93 (4%) Frame = +3 Query: 438 PGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQ 605 P D S RSV+VGN+ TE L ++F GPV +L+ ++ +GF +Y DQ Sbjct: 9 PAVDRSL-RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQ 67 Query: 606 RSAALAIMTLHGRHIYGQAIKVNWASASTQRED 704 +A A+ L+GR G+A++V+ A++ +E+ Sbjct: 68 ETALSAMRNLNGREFSGRALRVDNAASEKNKEE 100 Score = 51.6 bits (122), Expect = 1e-05 Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 1/83 (1%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG++ E + L FS R+++D +TG+ +GYGF +++Q+ A +A+ + Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 903 TGKWLGSRQIRC-NWATKTNAEE 968 G+ R +R N A++ N EE Sbjct: 78 NGREFSGRALRVDNAASEKNKEE 100
>Q15434:RBMS2_HUMAN RNA-binding motif, single-stranded-interacting protein 2 - Homo| sapiens (Human) Length = 407 Score = 56.2 bits (134), Expect = 5e-07 Identities = 43/182 (23%), Positives = 80/182 (43%), Gaps = 11/182 (6%) Frame = +3 Query: 405 QMEPVSNGNLPP-------GFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR 563 QM P S N P G D + ++Y+ + P T+ L+++ Q G + K I Sbjct: 30 QMAPPSPSNSTPNSSSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAIL 89 Query: 564 KEKSS----FGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFV 731 + ++ +GFVD+ D SAA +T A+K + A ++ ++++ Sbjct: 90 DKTTNKCKGYGFVDF-DSPSAAQKAVT---------ALKASGVQAQMAKQQEQDPTNLYI 139 Query: 732 GDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGK 911 +L +++ L + R++ D +G SRG GF + ++ E IT GK Sbjct: 140 SNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGTSRGVGFARMESTEKCEAIITHFNGK 198 Query: 912 WL 917 ++ Sbjct: 199 YI 200 Score = 35.8 bits (81), Expect = 0.64 Identities = 19/94 (20%), Positives = 38/94 (40%) Frame = +3 Query: 678 ASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFV 857 +S+ + D ++++ L D L Y + + D T + +GYGFV Sbjct: 43 SSSGSNGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFV 102 Query: 858 SFRNQQEAETAITEMTGKWLGSRQIRCNWATKTN 959 F + A+ A+T + + ++ + TN Sbjct: 103 DFDSPSAAQKAVTALKASGVQAQMAKQQEQDPTN 136
>P17130:ROA1_XENLA Heterogeneous nuclear ribonucleoproteins A1 homolog - Xenopus| laevis (African clawed frog) Length = 365 Score = 55.8 bits (133), Expect = 6e-07 Identities = 37/158 (23%), Positives = 64/158 (40%), Gaps = 7/158 (4%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSA 614 +P R +++G + T+ L E F+ G + C ++R K FGFV Y Sbjct: 9 EPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEV 68 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF---HIFVGDLSSEVNDATLYACFST 785 A MT + G+ ++ A + H IFVG + + + L F Sbjct: 69 DAA-MTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQ 127 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 Y +M D +G+ RG+ FV+F + + + + Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQ 165
>Q98SJ2:DAZP1_XENLA DAZ-associated protein 1 - Xenopus laevis (African clawed frog)| Length = 360 Score = 55.8 bits (133), Expect = 6e-07 Identities = 46/183 (25%), Positives = 66/183 (36%), Gaps = 4/183 (2%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG L TL + FS Y D +M D T +SRG+GFV F++ T + Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS- 70 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 R + N + K T G + KE N Sbjct: 71 ----------RPHTLDGRNIDPKPCTPR---------GMQPERSRPREGWQQKEPRTENS 111 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGA----IEEVRVQQEKGFGFIRYSTHGEAALA 1250 ++VG + H EL +F GV I + Q+ +GFGFI + A Sbjct: 112 RSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 171 Query: 1251 IQM 1259 + M Sbjct: 172 VNM 174 Score = 48.9 bits (115), Expect = 7e-05 Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 21/163 (12%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS-----FGFVDYYDQRSAALAIM- 629 ++VG + + T+ L F G V C +I K+K++ FGFV + D + Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDC-VIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70 Query: 630 ---TLHGRHIYGQAI------------KVNWASASTQREDTSGHFHIFVGDLSSEVNDAT 764 TL GR+I + + W + E++ + IFVG + + Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSN-KIFVGGIPHNCGETE 129 Query: 765 LYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAI 893 L F+ + ++ +++D + R RG+GF++F ++Q + A+ Sbjct: 130 LKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 172
>Q6P616:RBM22_XENTR Pre-mRNA-splicing factor RBM22 - Xenopus tropicalis (Western clawed| frog) (Silurana tropicalis) Length = 417 Score = 55.5 bits (132), Expect = 8e-07 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +3 Query: 1065 NPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAA 1244 +P + TT+YVG LG ++ EL HFY G I + V Q + FI+++T A Sbjct: 224 DPPEDKSITTLYVGGLGDTISESELRNHFYQF--GEIRTITVVQRQQCAFIQFATRQAAE 281 Query: 1245 LAIQMA-NGLVVRGKPIKCSWG 1307 +A + + N L+V G+ + WG Sbjct: 282 MAAEKSFNKLIVNGRRLNVKWG 303
>P08199:NUCL_MESAU Nucleolin - Mesocricetus auratus (Golden hamster)| Length = 714 Score = 55.5 bits (132), Expect = 8e-07 Identities = 39/168 (23%), Positives = 81/168 (48%), Gaps = 6/168 (3%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHG 641 +++ + N+ + TE L EVF+ + ++ + + + + F+++ A A+ + + Sbjct: 486 KTLVLSNLSYSATEETLQEVFEKATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSCNK 545 Query: 642 RHIYGQAIKVNWA------SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSD 803 I G+ I++ +A +Q T +FV LS + + TL F Sbjct: 546 MEIEGRTIRLELQGPRGSPNARSQPSKT-----LFVKGLSEDTTEETLKESFE---GSVR 597 Query: 804 ARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 AR++ D +TG S+G+GFV F ++++A+ A M + ++ +WA Sbjct: 598 ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 645 Score = 53.1 bits (126), Expect = 4e-06 Identities = 57/291 (19%), Positives = 119/291 (40%), Gaps = 10/291 (3%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFG--FVDYYDQRSAALAIMTL 635 R++ N+ N+TE+ L EVF+ + + +L+ ++ S G ++++ + A + Sbjct: 394 RTLLAKNLSFNITEDELKEVFEDALEI---RLVSQDGKSKGIAYIEFKSEADAEKNLEEK 450 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGHFHIFVGD-----LSSEVNDATLYACFSTYPSCS 800 G I G+++ + + QR++ +G + G+ LS+ AT + + Sbjct: 451 QGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKAT 510 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQET 980 +V N+ G+S+GY F+ F + ++A+ A+ CN K E Sbjct: 511 FIKVP-QNQQGKSKGYAFIEFASFEDAKEALNS------------CN---------KMEI 548 Query: 981 DNHNAVVLTNG--GSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFY 1154 + + G GS NA + ++ T++V L + + L F Sbjct: 549 EGRTIRLELQGPRGSPNARSQPSK---------------TLFVKGLSEDTTEETLKESFE 593 Query: 1155 -NLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 ++ + + KGFGF+ +++ +A A + + G + W Sbjct: 594 GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDW 644 Score = 39.3 bits (90), Expect = 0.058 Identities = 48/249 (19%), Positives = 100/249 (40%), Gaps = 56/249 (22%) Frame = +3 Query: 717 FHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIT 896 F++F+G+L+ + A L S + +D V+ D +TG +R +G+V F + ++ E A+ Sbjct: 308 FNLFIGNLNPNKSVAELKVAISEPFAKNDLAVV-DVRTGTNRKFGYVDFESAEDLEKAL- 365 Query: 897 EMTG-------------KWLGSRQIRC-------NWATKTNAEEKQET--DNHNAVVLTN 1010 E+TG K S+++R N + +E +E D +++ Sbjct: 366 ELTGLKVFGNEIKLEKPKGRDSKKVRAARTLLAKNLSFNITEDELKEVFEDALEIRLVSQ 425 Query: 1011 GGSSN--AAMEANQDTGSKENPEN--------------------------------NPDF 1088 G S A +E + +++N E + + Sbjct: 426 DGKSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGES 485 Query: 1089 TTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANG 1268 T+ + NL + + L F + + + + KG+ FI +++ +A A+ N Sbjct: 486 KTLVLSNLSYSATEETLQEVFEKATFIKVPQNQQGKSKGYAFIEFASFEDAKEALNSCNK 545 Query: 1269 LVVRGKPIK 1295 + + G+ I+ Sbjct: 546 MEIEGRTIR 554
>O35479:HNRPG_MOUSE Heterogeneous nuclear ribonucleoprotein G - Mus musculus (Mouse)| Length = 388 Score = 55.5 bits (132), Expect = 8e-07 Identities = 27/77 (35%), Positives = 44/77 (57%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F+G L++E N+ L A F Y + +M D +T +SRG+ FV+ + +A+ A +M Sbjct: 10 LFIGGLNTETNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDM 69 Query: 903 TGKWLGSRQIRCNWATK 953 GK L + I+ ATK Sbjct: 70 NGKSLDGKAIKVEQATK 86
>P51992:RO32_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 2 - Xenopus laevis| (African clawed frog) Length = 385 Score = 55.1 bits (131), Expect = 1e-06 Identities = 47/200 (23%), Positives = 78/200 (39%), Gaps = 7/200 (3%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSA 614 +P R +++G + T++ L E F+ G + C ++R K FGFV Y Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF---HIFVGDLSSEVNDATLYACFST 785 A M+ + G+ ++ A + H IFVG + + + L F Sbjct: 82 D-ASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYFEG 140 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAE 965 Y VM D ++G+ RG+ FV+F + + + + I + A Sbjct: 141 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK------YHTINLHNCEVKKAL 194 Query: 966 EKQETDNHNAVVLTNGGSSN 1025 KQE +A GG SN Sbjct: 195 SKQEMQTASAQRGRGGGGSN 214 Score = 32.3 bits (72), Expect = 7.1 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 4/57 (7%) Frame = +3 Query: 1068 PENNPDFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYS 1226 P+ +++G L E D L HF G + + + ++ +GFGF+ YS Sbjct: 20 PKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYS 76
>P13383:NUCL_RAT Nucleolin - Rattus norvegicus (Rat)| Length = 713 Score = 55.1 bits (131), Expect = 1e-06 Identities = 39/168 (23%), Positives = 80/168 (47%), Gaps = 6/168 (3%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHG 641 +++ + N+ + TE L EVF+ + ++ + + + F+++ A A+ + + Sbjct: 489 KTLVLSNLSYSATEETLQEVFEKATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNK 548 Query: 642 RHIYGQAIKVNWA------SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSD 803 I G+ I++ +A +Q T +FV LS + + TL F Sbjct: 549 MEIEGRTIRLELQGPRGSPNARSQPSKT-----LFVKGLSEDTTEETLKESFE---GSVR 600 Query: 804 ARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 AR++ D +TG S+G+GFV F ++++A+ A M + ++ +WA Sbjct: 601 ARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDWA 648 Score = 52.4 bits (124), Expect = 7e-06 Identities = 54/288 (18%), Positives = 113/288 (39%), Gaps = 3/288 (1%) Frame = +3 Query: 441 GFDPSTCRSVYVGNVHPN--VTE-NLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRS 611 G +P+T ++++GN++PN V E + I + + FG+VD+ Sbjct: 304 GSEPTTPFNLFIGNLNPNKSVAELKVAISELFAKNDLAAVDVRTGTNRKFGYVDFESAED 363 Query: 612 AALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYP 791 A + L G ++G IK+ ++ + + +LS + + L F Sbjct: 364 LEKA-LELTGLKVFGNEIKLEKPKGRDSKKVRAAR-TLLAKNLSFNITEDELKEVFE--- 418 Query: 792 SCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEK 971 + ++ GRS+G ++ F+++ +AE + E G + R + + + ++ Sbjct: 419 --DAVEIRLVSQDGRSKGIAYIEFKSEADAEKNLEEKQGAEIDGRSVSLYYTGEKG--QR 474 Query: 972 QETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHF 1151 QE N+ T G S T+ + NL + + L F Sbjct: 475 QERTGKNS---TWSGESK----------------------TLVLSNLSYSATEETLQEVF 509 Query: 1152 YNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 + + + KG+ FI +++ +A A+ N + + G+ I+ Sbjct: 510 EKATFIKVPQNPHGKSKGYAFIEFASFEDAKEALNSCNKMEIEGRTIR 557 Score = 52.0 bits (123), Expect = 9e-06 Identities = 57/291 (19%), Positives = 118/291 (40%), Gaps = 10/291 (3%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFG--FVDYYDQRSAALAIMTL 635 R++ N+ N+TE+ L EVF+ + + +L+ ++ S G ++++ + A + Sbjct: 397 RTLLAKNLSFNITEDELKEVFEDAVEI---RLVSQDGRSKGIAYIEFKSEADAEKNLEEK 453 Query: 636 HGRHIYGQAIKVNWASASTQREDTSGHFHIFVGD-----LSSEVNDATLYACFSTYPSCS 800 G I G+++ + + QR++ +G + G+ LS+ AT + + Sbjct: 454 QGAEIDGRSVSLYYTGEKGQRQERTGKNSTWSGESKTLVLSNLSYSATEETLQEVFEKAT 513 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQET 980 +V N G+S+GY F+ F + ++A+ A+ CN K E Sbjct: 514 FIKVP-QNPHGKSKGYAFIEFASFEDAKEALNS------------CN---------KMEI 551 Query: 981 DNHNAVVLTNG--GSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFY 1154 + + G GS NA + ++ T++V L + + L F Sbjct: 552 EGRTIRLELQGPRGSPNARSQPSK---------------TLFVKGLSEDTTEETLKESFE 596 Query: 1155 -NLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKCSW 1304 ++ + + KGFGF+ +++ +A A + + G + W Sbjct: 597 GSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAKEAMEDGEIDGNKVTLDW 647
>Q91W59:RBMS1_MOUSE RNA-binding motif, single-stranded-interacting protein 1 - Mus| musculus (Mouse) Length = 403 Score = 54.7 bits (130), Expect = 1e-06 Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 4/170 (2%) Frame = +3 Query: 420 SNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGF 587 S+ + G+D + ++Y+ + PN T+ L+++ Q G + K I + ++ +GF Sbjct: 48 SSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGF 107 Query: 588 VDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATL 767 VD+ +A A+ A+K N A ++ ++++ +L +++ L Sbjct: 108 VDFDSPAAAQKAV----------SALKANGVQAQMAKQQEQDPTNLYISNLPLSMDEQEL 157 Query: 768 YACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWL 917 + RV+ D+ +G SRG GF + ++ E I GK++ Sbjct: 158 ENMLKPFGQVISTRVLRDS-SGASRGVGFARMESTEKCEAVIGHFNGKFI 206 Score = 35.4 bits (80), Expect = 0.83 Identities = 20/96 (20%), Positives = 39/96 (40%) Frame = +3 Query: 672 NWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYG 851 N +S+S D ++++ L D L Y + + D T + +GYG Sbjct: 47 NSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYG 106 Query: 852 FVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTN 959 FV F + A+ A++ + + ++ + TN Sbjct: 107 FVDFDSPAAAQKAVSALKANGVQAQMAKQQEQDPTN 142
>Q7ZXB5:RBM22_XENLA Pre-mRNA-splicing factor RBM22 - Xenopus laevis (African clawed frog)| Length = 417 Score = 54.7 bits (130), Expect = 1e-06 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +3 Query: 1065 NPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAA 1244 +P + TT+YVG LG ++ EL HFY G I + V Q + FI+++T A Sbjct: 224 DPPEDKSITTLYVGGLGDTISESELRNHFYQF--GEIRTITVVQRQQCAFIQFATRQSAE 281 Query: 1245 LAIQMA-NGLVVRGKPIKCSWG 1307 A + + N L+V G+ + WG Sbjct: 282 TAAEKSFNKLIVNGRRLNVKWG 303
>Q99181:HSH49_YEAST Protein HSH49 - Saccharomyces cerevisiae (Baker's yeast)| Length = 213 Score = 54.7 bits (130), Expect = 1e-06 Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 14/181 (7%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKL----IRKEKSSFGFVDYYDQRSAALAIMT 632 +VYVGN+ P +T+ L E+F PV R K + + + F+++Y+Q A AI Sbjct: 10 TVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIKI 69 Query: 633 LHGR-HIYGQAIKVNWASASTQREDTSGHF---------HIFVGDLSSEVNDATLYACFS 782 ++ +Y + IKV + ST + + +F+ +L+ ++ L F+ Sbjct: 70 MNNTVRLYDRLIKVRQVTNSTGTTNLPSNISKDMILPIAKLFIKNLADSIDSDQLVKIFN 129 Query: 783 TYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNA 962 + ++ G+ + +V F + ++A+ AI + + + + +I ++A K N Sbjct: 130 KFGKLIREPEIFYLSNGKLK-CAYVYFEDFEKADLAIKSLNNQLVANNRITVDYAFKENG 188 Query: 963 E 965 + Sbjct: 189 K 189 Score = 35.8 bits (81), Expect = 0.64 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYN----LGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQM 1259 TVYVGN+ + +++L+ F L + ++ +Q +G+ FI + G+A AI++ Sbjct: 10 TVYVGNIDPRITKEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIEFYNQGDAQYAIKI 69 Query: 1260 ANGLV 1274 N V Sbjct: 70 MNNTV 74
>Q6URK4:ROA3_RAT Heterogeneous nuclear ribonucleoprotein A3 - Rattus norvegicus (Rat)| Length = 379 Score = 54.3 bits (129), Expect = 2e-06 Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 7/200 (3%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSA 614 +P R +++G + T++ L E F+ G + C ++R K FGFV Y Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF---HIFVGDLSSEVNDATLYACFST 785 A M + G+ ++ A + H IFVG + + + L F Sbjct: 90 DAA-MCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK 148 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAE 965 Y VM D ++G+ RG+ FV+F + + + + K+ C + + Sbjct: 149 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ---KYHTINGHNCEVKKALSKQ 205 Query: 966 EKQETDNHNAVVLTNGGSSN 1025 E Q + GGS N Sbjct: 206 EMQSAGSQRG---RGGGSGN 222 Score = 33.5 bits (75), Expect = 3.2 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Frame = +3 Query: 1065 NPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGV----GAIEEVRVQQEKGFGFIRYSTH 1232 +P+ +++G L E D L HF G + + + ++ +GFGF+ YS Sbjct: 27 DPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCV 86 Query: 1233 GEAALAI 1253 E A+ Sbjct: 87 EEVDAAM 93
>Q8BG05:ROA3_MOUSE Heterogeneous nuclear ribonucleoprotein A3 - Mus musculus (Mouse)| Length = 379 Score = 54.3 bits (129), Expect = 2e-06 Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 7/200 (3%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSA 614 +P R +++G + T++ L E F+ G + C ++R K FGFV Y Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF---HIFVGDLSSEVNDATLYACFST 785 A M + G+ ++ A + H IFVG + + + L F Sbjct: 90 DAA-MCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK 148 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAE 965 Y VM D ++G+ RG+ FV+F + + + + K+ C + + Sbjct: 149 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ---KYHTINGHNCEVKKALSKQ 205 Query: 966 EKQETDNHNAVVLTNGGSSN 1025 E Q + GGS N Sbjct: 206 EMQSAGSQRG---RGGGSGN 222 Score = 33.5 bits (75), Expect = 3.2 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Frame = +3 Query: 1065 NPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGV----GAIEEVRVQQEKGFGFIRYSTH 1232 +P+ +++G L E D L HF G + + + ++ +GFGF+ YS Sbjct: 27 DPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCV 86 Query: 1233 GEAALAI 1253 E A+ Sbjct: 87 EEVDAAM 93
>P51991:ROA3_HUMAN Heterogeneous nuclear ribonucleoprotein A3 - Homo sapiens (Human)| Length = 378 Score = 54.3 bits (129), Expect = 2e-06 Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 7/200 (3%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSA 614 +P R +++G + T++ L E F+ G + C ++R K FGFV Y Sbjct: 30 EPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 89 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF---HIFVGDLSSEVNDATLYACFST 785 A M + G+ ++ A + H IFVG + + + L F Sbjct: 90 DAA-MCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEK 148 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAE 965 Y VM D ++G+ RG+ FV+F + + + + K+ C + + Sbjct: 149 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ---KYHTINGHNCEVKKALSKQ 205 Query: 966 EKQETDNHNAVVLTNGGSSN 1025 E Q + GGS N Sbjct: 206 EMQSAGSQRG---RGGGSGN 222 Score = 33.5 bits (75), Expect = 3.2 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 4/67 (5%) Frame = +3 Query: 1065 NPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGV----GAIEEVRVQQEKGFGFIRYSTH 1232 +P+ +++G L E D L HF G + + + ++ +GFGF+ YS Sbjct: 27 DPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCV 86 Query: 1233 GEAALAI 1253 E A+ Sbjct: 87 EEVDAAM 93
>Q9Y580:RBM7_HUMAN RNA-binding protein 7 - Homo sapiens (Human)| Length = 266 Score = 54.3 bits (129), Expect = 2e-06 Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 4/81 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEK----SSFGFVDYYDQRSAALAIM 629 R+++VGN+ VTE LL E+F +GPV + K I K+K F FV++ + S A+ Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVK-IPKDKDGKPKQFAFVNFKHEVSVPYAMN 68 Query: 630 TLHGRHIYGQAIKVNWASAST 692 L+G +YG+ IK+ + S S+ Sbjct: 69 LLNGIKLYGRPIKIQFRSGSS 89 Score = 35.8 bits (81), Expect = 0.64 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKG-----FGFIRYSTHGEAALAIQ 1256 T++VGNL +V + L F+ G + +V++ ++K F F+ + A+ Sbjct: 11 TLFVGNLETKVTEELLFELFHQ--AGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMN 68 Query: 1257 MANGLVVRGKPIK 1295 + NG+ + G+PIK Sbjct: 69 LLNGIKLYGRPIK 81
>O43347:MSI1H_HUMAN RNA-binding protein Musashi homolog 1 - Homo sapiens (Human)| Length = 362 Score = 54.3 bits (129), Expect = 2e-06 Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 6/166 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMTL 635 +++G + T+ L E F G V+ C ++R K FGFV + DQ A + + Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQ--AGVDKVLA 79 Query: 636 HGRH-IYGQAIKVNWA-SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDAR 809 RH + + I A Q + + IFVG LS + F + DA Sbjct: 80 QSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAM 139 Query: 810 VMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 +M+D T R RG+GFV+F ++ E + E+ + ++ + C A Sbjct: 140 LMFDKTTNRHRGFGFVTFESEDIVE-KVCEIHFHEINNKMVECKKA 184
>O75526:HNRGT_HUMAN Testis-specific heterogeneous nuclear ribonucleoprotein G-T - Homo| sapiens (Human) Length = 392 Score = 54.3 bits (129), Expect = 2e-06 Identities = 28/84 (33%), Positives = 46/84 (54%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F+G L+ E ++ L A F Y + +M D +T +SRG+ FV+F + +A+ A +M Sbjct: 10 LFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARDM 69 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQ 974 GK L + I+ ATK E + Sbjct: 70 NGKSLDGKAIKVAQATKPAFESSR 93
>Q96EP5:DAZP1_HUMAN DAZ-associated protein 1 - Homo sapiens (Human)| Length = 407 Score = 54.3 bits (129), Expect = 2e-06 Identities = 46/183 (25%), Positives = 69/183 (37%), Gaps = 4/183 (2%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG L TL + FS Y D +M D T +SRG+GFV F++ T + Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 L R I T + ++ E Q +N ++N Sbjct: 72 PHT-LDGRNIDPKPCTPRGMQPERTRPK----------------EGWQKGPRSDNSKSNK 114 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGA----IEEVRVQQEKGFGFIRYSTHGEAALA 1250 ++VG + H EL +F GV I + Q+ +GFGFI + A Sbjct: 115 ----IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 170 Query: 1251 IQM 1259 + M Sbjct: 171 VNM 173 Score = 50.4 bits (119), Expect = 3e-05 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 21/163 (12%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS-----FGFVDYYDQRSAALAIM- 629 ++VG + + T+ L F G V C +I K+K++ FGFV + D + Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDC-VIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70 Query: 630 ---TLHGRHIYGQAI------------KVNWASASTQREDTSGHFHIFVGDLSSEVNDAT 764 TL GR+I + K W R D S IFVG + + Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGP--RSDNSKSNKIFVGGIPHNCGETE 128 Query: 765 LYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAI 893 L F + ++ +++D + R RG+GF++F ++Q + A+ Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
>Q8C7E9:CSTFT_MOUSE Cleavage stimulation factor 64 kDa subunit, tau variant - Mus| musculus (Mouse) Length = 632 Score = 54.3 bits (129), Expect = 2e-06 Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 1/134 (0%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG++ E + L FS S R+++D +TG+ +GYGF +++Q+ A +A+ + Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 903 TGKWLGSRQIRC-NWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENN 1079 G+ R +R N A++ N EE + AA + G +PE+ Sbjct: 78 NGREFSGRALRVDNAASEKNKEELKSL-------------GPAAPIIDSPYGDPIDPEDA 124 Query: 1080 PDFTTVYVGNLGHE 1121 P+ T V +L E Sbjct: 125 PESITRAVASLPPE 138 Score = 53.9 bits (128), Expect = 2e-06 Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 4/93 (4%) Frame = +3 Query: 438 PGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQ 605 P D S RSV+VGN+ TE L ++F G V +L+ ++ +GF +Y DQ Sbjct: 9 PAMDRSL-RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQ 67 Query: 606 RSAALAIMTLHGRHIYGQAIKVNWASASTQRED 704 +A A+ L+GR G+A++V+ A++ +E+ Sbjct: 68 ETALSAMRNLNGREFSGRALRVDNAASEKNKEE 100
>Q9H0L4:CSTFT_HUMAN Cleavage stimulation factor 64 kDa subunit, tau variant - Homo| sapiens (Human) Length = 616 Score = 54.3 bits (129), Expect = 2e-06 Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 1/134 (0%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG++ E + L FS S R+++D +TG+ +GYGF +++Q+ A +A+ + Sbjct: 18 VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNL 77 Query: 903 TGKWLGSRQIRC-NWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENN 1079 G+ R +R N A++ N EE + AA + G +PE+ Sbjct: 78 NGREFSGRALRVDNAASEKNKEELKSL-------------GPAAPIIDSPYGDPIDPEDA 124 Query: 1080 PDFTTVYVGNLGHE 1121 P+ T V +L E Sbjct: 125 PESITRAVASLPPE 138 Score = 53.9 bits (128), Expect = 2e-06 Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 4/93 (4%) Frame = +3 Query: 438 PGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQ 605 P D S RSV+VGN+ TE L ++F G V +L+ ++ +GF +Y DQ Sbjct: 9 PAMDRSL-RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQ 67 Query: 606 RSAALAIMTLHGRHIYGQAIKVNWASASTQRED 704 +A A+ L+GR G+A++V+ A++ +E+ Sbjct: 68 ETALSAMRNLNGREFSGRALRVDNAASEKNKEE 100
>Q44556:RBPD_ANASP Putative RNA-binding protein rbpD - Anabaena sp. (strain PCC 7120)| Length = 94 Score = 53.9 bits (128), Expect = 2e-06 Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 1/76 (1%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 I+VG+LS +A L A F+ Y + D +TGR RG+ FV + + AITE+ Sbjct: 3 IYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITEL 62 Query: 903 TG-KWLGSRQIRCNWA 947 G +W+G RQ+R N A Sbjct: 63 DGAEWMG-RQLRVNKA 77 Score = 34.3 bits (77), Expect = 1.9 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 4/87 (4%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----SFGFVDYYDQRSAALAIMT 632 ++YVGN+ TE L VF G V+R L ++ F FV+ + AI Sbjct: 2 TIYVGNLSYRATEADLKAVFADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITE 61 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSG 713 L G G+ ++VN A + +D G Sbjct: 62 LDGAEWMGRQLRVN--KAKPREDDRRG 86
>Q8VC70:RBMS2_MOUSE RNA-binding motif, single-stranded-interacting protein 2 - Mus| musculus (Mouse) Length = 383 Score = 53.9 bits (128), Expect = 2e-06 Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 15/186 (8%) Frame = +3 Query: 405 QMEPVSNGNLPP-----------GFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERC 551 QM P S N P G D + ++Y+ + P T+ L+++ Q G + Sbjct: 28 QMAPPSPRNSTPNSSGGGGGGSGGNDQLSKTNLYIRGLQPGTTDQDLVKLCQPYGKIVST 87 Query: 552 KLIRKEKSS----FGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF 719 K I + ++ +GFVD+ SA A+ L + Q K Q +D + Sbjct: 88 KAILDKTTNKCKGYGFVDFDSPSSAQKAVTALKASGVQAQMAK-------QQEQDPT--- 137 Query: 720 HIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++++ +L +++ L + R++ D +G SRG GF + ++ E IT Sbjct: 138 NLYISNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGASRGVGFARMESTEKCEAIITH 196 Query: 900 MTGKWL 917 GK++ Sbjct: 197 FNGKYI 202 Score = 34.3 bits (77), Expect = 1.9 Identities = 17/80 (21%), Positives = 33/80 (41%) Frame = +3 Query: 720 HIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++++ L D L Y + + D T + +GYGFV F + A+ A+T Sbjct: 59 NLYIRGLQPGTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSSAQKAVTA 118 Query: 900 MTGKWLGSRQIRCNWATKTN 959 + + ++ + TN Sbjct: 119 LKASGVQAQMAKQQEQDPTN 138
>Q3ZC34:RBMS2_BOVIN RNA-binding motif, single-stranded-interacting protein 2 - Bos| taurus (Bovine) Length = 407 Score = 53.9 bits (128), Expect = 2e-06 Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 11/182 (6%) Frame = +3 Query: 405 QMEPVSNGNLPPG-------FDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR 563 QM P S + P D + ++Y+ + P+ T+ L+++ Q G + K I Sbjct: 30 QMAPPSPSSSTPNSSSGSTAHDQLSKTNLYIRGLQPSTTDQDLVKLCQSYGKIVSTKAIL 89 Query: 564 KEKSS----FGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFV 731 + ++ +GFVD+ D SAA +T A+K + A ++ ++++ Sbjct: 90 DKTTNKCKGYGFVDF-DSPSAAQKAVT---------ALKASGVQAQMAKQQEQDPTNLYI 139 Query: 732 GDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGK 911 +L +++ L + R++ D +G SRG GF + ++ E IT GK Sbjct: 140 SNLPLSMDEQELEGMLKPFGQVISTRILRDT-SGTSRGVGFARMESTEKCEAIITHFNGK 198 Query: 912 WL 917 ++ Sbjct: 199 YI 200 Score = 37.7 bits (86), Expect = 0.17 Identities = 22/96 (22%), Positives = 41/96 (42%) Frame = +3 Query: 672 NWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYG 851 N +S ST + S ++++ L D L +Y + + D T + +GYG Sbjct: 42 NSSSGSTAHDQLS-KTNLYIRGLQPSTTDQDLVKLCQSYGKIVSTKAILDKTTNKCKGYG 100 Query: 852 FVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTN 959 FV F + A+ A+T + + ++ + TN Sbjct: 101 FVDFDSPSAAQKAVTALKASGVQAQMAKQQEQDPTN 136
>Q8K3P4:MSI1H_RAT RNA-binding protein Musashi homolog 1 - Rattus norvegicus (Rat)| Length = 362 Score = 53.9 bits (128), Expect = 2e-06 Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 6/166 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMTL 635 +++G + T+ L E F G V+ C ++R K FGFV + DQ A + + Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQ--AGVDKVLA 79 Query: 636 HGRH-IYGQAIKVNWA-SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDAR 809 RH + + I A Q + + IFVG LS + F + DA Sbjct: 80 QSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAM 139 Query: 810 VMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 +M+D T R RG+GFV+F ++ E + E+ + ++ + C A Sbjct: 140 LMFDKTTNRHRGFGFVTFESEDIVE-KVCEIHFHEINNKMVECKKA 184
>Q61474:MSI1H_MOUSE RNA-binding protein Musashi homolog 1 - Mus musculus (Mouse)| Length = 362 Score = 53.9 bits (128), Expect = 2e-06 Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 6/166 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMTL 635 +++G + T+ L E F G V+ C ++R K FGFV + DQ A + + Sbjct: 22 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQ--AGVDKVLA 79 Query: 636 HGRH-IYGQAIKVNWA-SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDAR 809 RH + + I A Q + + IFVG LS + F + DA Sbjct: 80 QSRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAM 139 Query: 810 VMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 +M+D T R RG+GFV+F ++ E + E+ + ++ + C A Sbjct: 140 LMFDKTTNRHRGFGFVTFESEDIVE-KVCEIHFHEINNKMVECKKA 184
>Q57014:RBPA_SYNY3 Putative RNA-binding protein rbpA - Synechocystis sp. (strain PCC| 6803) Length = 101 Score = 53.5 bits (127), Expect = 3e-06 Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 I+VG+LS +V++A L A F+ Y S ++ D +TGR RG+GFV E AI + Sbjct: 3 IYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEAL 62 Query: 903 TG-KWLGSRQIRCNWA 947 G +W+G R ++ N A Sbjct: 63 DGAEWMG-RDLKVNKA 77 Score = 40.8 bits (94), Expect = 0.020 Identities = 31/87 (35%), Positives = 43/87 (49%), Gaps = 4/87 (4%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----SFGFVDYYDQRSAALAIMT 632 S+YVGN+ +V+E L VF G V+R +L ++ FGFV+ AI Sbjct: 2 SIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEA 61 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSG 713 L G G+ +KVN A RE+ SG Sbjct: 62 LDGAEWMGRDLKVNKAK---PRENRSG 85 Score = 35.4 bits (80), Expect = 0.83 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 4/72 (5%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGEAALAIQM 1259 ++YVGNL ++V+ +L F G ++ +E +GFGF+ E AI+ Sbjct: 2 SIYVGNLSYDVSEADLTAVFAEYGSVKRVQLPTDRETGRMRGFGFVELEADAEETAAIEA 61 Query: 1260 ANGLVVRGKPIK 1295 +G G+ +K Sbjct: 62 LDGAEWMGRDLK 73
>Q5ZM16:RBM22_CHICK Pre-mRNA-splicing factor RBM22 - Gallus gallus (Chicken)| Length = 420 Score = 53.5 bits (127), Expect = 3e-06 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = +3 Query: 1065 NPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAA 1244 +P ++ TT+YVG LG + +L HFY G I + V Q + FI+++T A Sbjct: 224 DPPDDKTITTLYVGGLGDTITESDLRNHFYQF--GEIRTITVVQRQQCAFIQFATRQAAE 281 Query: 1245 LAIQMA-NGLVVRGKPIKCSWG 1307 +A + + N L+V G+ + WG Sbjct: 282 VAAEKSFNKLIVNGRRLNVKWG 303
>Q4R813:HNRGT_MACFA Testis-specific heterogeneous nuclear ribonucleoprotein G-T -| Macaca fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 394 Score = 53.5 bits (127), Expect = 3e-06 Identities = 28/84 (33%), Positives = 45/84 (53%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F+G L+ E ++ L A F Y + +M D +T +SRG+ FV+F + A+ A +M Sbjct: 10 LFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARDM 69 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQ 974 GK L + I+ ATK E + Sbjct: 70 NGKSLDGKAIKVAQATKPAFESSR 93
>Q9CQT2:RBM7_MOUSE RNA-binding protein 7 - Mus musculus (Mouse)| Length = 265 Score = 53.1 bits (126), Expect = 4e-06 Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 6/100 (6%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEK----SSFGFVDYYDQRSAALAIM 629 R+++VGN+ VTE LL E+F +GPV + K I K+K F FV++ + S A+ Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVK-IPKDKDGKLKQFAFVNFKHEVSVPYAMN 68 Query: 630 TLHGRHIYGQAIKVNWASASTQ-REDTSGHF-HIFVGDLS 743 L+G ++G+ IK+ + S S+ +D S + VG+LS Sbjct: 69 LLNGIKLFGRPIKIQFRSGSSHASQDASVSYPQHHVGNLS 108 Score = 35.4 bits (80), Expect = 0.83 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKG-----FGFIRYSTHGEAALAIQ 1256 T++VGNL +V + L F+ G + +V++ ++K F F+ + A+ Sbjct: 11 TLFVGNLETKVTEELLFELFHQ--AGPVIKVKIPKDKDGKLKQFAFVNFKHEVSVPYAMN 68 Query: 1257 MANGLVVRGKPIK 1295 + NG+ + G+PIK Sbjct: 69 LLNGIKLFGRPIK 81
>Q9NW13:RBM28_HUMAN RNA-binding protein 28 - Homo sapiens (Human)| Length = 759 Score = 53.1 bits (126), Expect = 4e-06 Identities = 51/244 (20%), Positives = 92/244 (37%), Gaps = 36/244 (14%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYY---DQRSAALA 623 +++VG + P+ L E+F GPV++C ++ ++ S FG+V + D + A Sbjct: 5 TLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKE 64 Query: 624 IMTLHGRHIYGQAIKVNWASASTQREDTSGH------------------FHIFVGDLSSE 749 I T G I K + + ++ + + +LS + Sbjct: 65 ITTFEGCKINVTVAKKKLRNKTKEKGKNENSECPKKEPKAKKAKVADKKARLIIRNLSFK 124 Query: 750 VNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQ 929 ++ L F+ + + + + G+ RG+GFV F+N EA A+ M K + R Sbjct: 125 CSEDDLKTVFAQFGAVLEVNIP-RKPDGKMRGFGFVQFKNLLEAGKALKGMNMKEIKGRT 183 Query: 930 IRCNWATKTN-----------AEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPEN 1076 + +WA + EEK H V G E D ++ E Sbjct: 184 VAVDWAVAKDKYKDTQSVSAIGEEKSHESKHQESVKKKGREEEDMEEEENDDDDDDDDEE 243 Query: 1077 NPDF 1088 + F Sbjct: 244 DGVF 247 Score = 45.4 bits (106), Expect = 8e-04 Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 5/199 (2%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG L L FS V+ + + RG+G+V+F ++ + A+ E+ Sbjct: 6 LFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEI 65 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 T +I A K + +E G + N+ + K + Sbjct: 66 TT--FEGCKINVTVAKKKLRNKTKE----------KGKNENSECPKKEPKAKKAKVADKK 113 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE-----KGFGFIRYSTHGEAAL 1247 + + NL + + D+L F G A+ EV + ++ +GFGF+++ EA Sbjct: 114 --ARLIIRNLSFKCSEDDLKTVFAQFG--AVLEVNIPRKPDGKMRGFGFVQFKNLLEAGK 169 Query: 1248 AIQMANGLVVRGKPIKCSW 1304 A++ N ++G+ + W Sbjct: 170 ALKGMNMKEIKGRTVAVDW 188
>Q4V7D7:RBM22_RAT Pre-mRNA-splicing factor RBM22 - Rattus norvegicus (Rat)| Length = 420 Score = 53.1 bits (126), Expect = 4e-06 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +3 Query: 1065 NPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAA 1244 +P + TT+YVG LG + +L HFY G I V V Q + FI+++T A Sbjct: 224 DPPEDKTITTLYVGGLGDTITETDLRNHFYQF--GEIRTVTVVQRQQCAFIQFATRQAAE 281 Query: 1245 LAIQMA-NGLVVRGKPIKCSWG 1307 +A + + N L+V G+ + WG Sbjct: 282 VAAEKSFNKLIVNGRRLNVKWG 303
>P57052:RBM11_HUMAN Putative RNA-binding protein 11 - Homo sapiens (Human)| Length = 281 Score = 53.1 bits (126), Expect = 4e-06 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 3/84 (3%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVER---CKLIRKEKSSFGFVDYYDQRSAALAIMT 632 R+V+VGN+ V E +L E+F +GP+ + CK + SFGFV + S + AI Sbjct: 10 RTVFVGNLEARVREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIAL 69 Query: 633 LHGRHIYGQAIKVNWASASTQRED 704 L+G +YG+ I V + S++ + Sbjct: 70 LNGIRLYGRPINVQYRFGSSRSSE 93 Score = 37.0 bits (84), Expect = 0.29 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE-----KGFGFIRYSTHGEAALAIQ 1256 TV+VGNL V + L+ F L G + +V + ++ K FGF+ + + AI Sbjct: 11 TVFVGNLEARVREEILYELF--LQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 68 Query: 1257 MANGLVVRGKPIKCSW 1304 + NG+ + G+PI + Sbjct: 69 LLNGIRLYGRPINVQY 84
>Q96J87:CELF6_HUMAN CUG-BP- and ETR-3-like factor 6 - Homo sapiens (Human)| Length = 481 Score = 53.1 bits (126), Expect = 4e-06 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 12/111 (10%) Frame = +3 Query: 639 GRHIYGQAIKVNWASAST------------QREDTSGHFHIFVGDLSSEVNDATLYACFS 782 G H Y A +A ST QRE G ++F+ L E DA L F Sbjct: 359 GMHHYAAAYPSAYAPVSTAFPQQPSALPQQQREGPEG-CNLFIYHLPQEFGDAELIQTFL 417 Query: 783 TYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIR 935 + + A+V D T +S+ +GFVSF N A+TAI M G +G ++++ Sbjct: 418 PFGAVVSAKVFVDRATNQSKCFGFVSFDNPTSAQTAIQAMNGFQIGMKRLK 468 Score = 32.3 bits (72), Expect = 7.1 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 4/99 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGFVDYYDQRSAALAIMT 632 R ++VG + E + +FQ G +E C ++R FV + Q A AI Sbjct: 134 RKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIRG 193 Query: 633 LHG-RHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSS 746 LHG R + G + + A T RE G L + Sbjct: 194 LHGSRTMAGASSSLVVKLADTDRERALRRMQQMAGHLGA 232 Score = 32.0 bits (71), Expect = 9.2 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 4/88 (4%) Frame = +3 Query: 1044 QDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQ----QEKGFG 1211 Q + + P+ +++ +L E EL + F G +V V Q K FG Sbjct: 381 QPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFG 440 Query: 1212 FIRYSTHGEAALAIQMANGLVVRGKPIK 1295 F+ + A AIQ NG + K +K Sbjct: 441 FVSFDNPTSAQTAIQAMNGFQIGMKRLK 468
>Q44560:RBPA_ANASP Putative RNA-binding protein rbpA - Anabaena sp. (strain PCC 7120)| Length = 102 Score = 52.8 bits (125), Expect = 5e-06 Identities = 34/102 (33%), Positives = 51/102 (50%), Gaps = 1/102 (0%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 I+VG+LS EV TL A F+ Y + ++ D +TG+ RG+GFV ++ E AI + Sbjct: 3 IYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEAL 62 Query: 903 TG-KWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSN 1025 G +W+G R ++ N K E + N GG N Sbjct: 63 DGAEWMG-RDLKVN---KAKPREDRGPSGGNRGGYGGGGGRN 100 Score = 46.2 bits (108), Expect = 5e-04 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 4/88 (4%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----SFGFVDYYDQRSAALAIMT 632 S+YVGN+ VT++ L VF G V+R +L ++ FGFV+ + A AI Sbjct: 2 SIYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEA 61 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGH 716 L G G+ +KVN A R + G+ Sbjct: 62 LDGAEWMGRDLKVNKAKPREDRGPSGGN 89 Score = 42.0 bits (97), Expect = 0.009 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGEAALAIQM 1259 ++YVGNL +EV +D L F G ++ +E +GFGF+ + E A AI+ Sbjct: 2 SIYVGNLSYEVTQDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEA 61 Query: 1260 ANGLVVRGKPIK 1295 +G G+ +K Sbjct: 62 LDGAEWMGRDLK 73
>Q5PQP1:RBMS1_RAT RNA-binding motif, single-stranded-interacting protein 1 - Rattus| norvegicus (Rat) Length = 403 Score = 52.8 bits (125), Expect = 5e-06 Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 4/170 (2%) Frame = +3 Query: 420 SNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGF 587 S+ + G+D + ++Y+ + PN T+ L+++ Q G + K I + ++ +GF Sbjct: 48 SSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYGF 107 Query: 588 VDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATL 767 VD+ +A A+ L + Q K Q +D + ++++ +L +++ L Sbjct: 108 VDFDSPAAAQKAVSALKASGVQAQMAK-------QQEQDPT---NLYISNLPLSMDEQEL 157 Query: 768 YACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWL 917 + RV+ D+ +G SRG GF + ++ E I GK++ Sbjct: 158 ENMLKPFGQVISTRVLRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFI 206 Score = 35.4 bits (80), Expect = 0.83 Identities = 20/96 (20%), Positives = 39/96 (40%) Frame = +3 Query: 672 NWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYG 851 N +S+S D ++++ L D L Y + + D T + +GYG Sbjct: 47 NSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKCKGYG 106 Query: 852 FVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTN 959 FV F + A+ A++ + + ++ + TN Sbjct: 107 FVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTN 142
>Q5RAY5:RBM22_PONPY Pre-mRNA-splicing factor RBM22 - Pongo pygmaeus (Orangutan)| Length = 420 Score = 52.8 bits (125), Expect = 5e-06 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +3 Query: 1065 NPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAA 1244 +P + TT+YVG LG + +L HFY G I + V Q + FI+++T A Sbjct: 224 DPPEDKTITTLYVGGLGDTITETDLRNHFYQF--GEIRTITVVQRQQCAFIQFATRQAAE 281 Query: 1245 LAIQMA-NGLVVRGKPIKCSWG 1307 +A + + N L+V G+ + WG Sbjct: 282 VAAEKSFNKLIVNGRRLNVKWG 303
>Q8BHS3:RBM22_MOUSE Pre-mRNA-splicing factor RBM22 - Mus musculus (Mouse)| Length = 420 Score = 52.8 bits (125), Expect = 5e-06 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +3 Query: 1065 NPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAA 1244 +P + TT+YVG LG + +L HFY G I + V Q + FI+++T A Sbjct: 224 DPPEDKTITTLYVGGLGDTITETDLRNHFYQF--GEIRTITVVQRQQCAFIQFATRQAAE 281 Query: 1245 LAIQMA-NGLVVRGKPIKCSWG 1307 +A + + N L+V G+ + WG Sbjct: 282 VAAEKSFNKLIVNGRRLNVKWG 303
>Q4R4J1:RBM22_MACFA Pre-mRNA-splicing factor RBM22 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 420 Score = 52.8 bits (125), Expect = 5e-06 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +3 Query: 1065 NPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAA 1244 +P + TT+YVG LG + +L HFY G I + V Q + FI+++T A Sbjct: 224 DPPEDKTITTLYVGGLGDTITETDLRNHFYQF--GEIRTITVVQRQQCAFIQFATRQAAE 281 Query: 1245 LAIQMA-NGLVVRGKPIKCSWG 1307 +A + + N L+V G+ + WG Sbjct: 282 VAAEKSFNKLIVNGRRLNVKWG 303
>Q9NW64:RBM22_HUMAN Pre-mRNA-splicing factor RBM22 - Homo sapiens (Human)| Length = 420 Score = 52.8 bits (125), Expect = 5e-06 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%) Frame = +3 Query: 1065 NPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAA 1244 +P + TT+YVG LG + +L HFY G I + V Q + FI+++T A Sbjct: 224 DPPEDKTITTLYVGGLGDTITETDLRNHFYQF--GEIRTITVVQRQQCAFIQFATRQAAE 281 Query: 1245 LAIQMA-NGLVVRGKPIKCSWG 1307 +A + + N L+V G+ + WG Sbjct: 282 VAAEKSFNKLIVNGRRLNVKWG 303
>Q9QZH3:PPIE_MOUSE Peptidyl-prolyl cis-trans isomerase E - Mus musculus (Mouse)| Length = 301 Score = 52.8 bits (125), Expect = 5e-06 Identities = 28/82 (34%), Positives = 43/82 (52%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 ++VG L+ EV+D L+A F + +D ++ D +T + RG+ FV F ++A AI M Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67 Query: 903 TGKWLGSRQIRCNWATKTNAEE 968 L R IR N A +E Sbjct: 68 NESELFGRTIRVNLAKPMRIKE 89 Score = 33.9 bits (76), Expect = 2.4 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 4/90 (4%) Frame = +3 Query: 453 STCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLI----RKEKSSFGFVDYYDQRSAAL 620 +T R +YVG + V + +L F G + ++ ++ F FV++ AA Sbjct: 3 TTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAA 62 Query: 621 AIMTLHGRHIYGQAIKVNWASASTQREDTS 710 AI ++ ++G+ I+VN A +E +S Sbjct: 63 AIDNMNESELFGRTIRVNLAKPMRIKEGSS 92
>Q9UNP9:PPIE_HUMAN Peptidyl-prolyl cis-trans isomerase E - Homo sapiens (Human)| Length = 301 Score = 52.8 bits (125), Expect = 5e-06 Identities = 28/82 (34%), Positives = 43/82 (52%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 ++VG L+ EV+D L+A F + +D ++ D +T + RG+ FV F ++A AI M Sbjct: 8 LYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDNM 67 Query: 903 TGKWLGSRQIRCNWATKTNAEE 968 L R IR N A +E Sbjct: 68 NESELFGRTIRVNLAKPMRIKE 89 Score = 33.9 bits (76), Expect = 2.4 Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 4/90 (4%) Frame = +3 Query: 453 STCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLI----RKEKSSFGFVDYYDQRSAAL 620 +T R +YVG + V + +L F G + ++ ++ F FV++ AA Sbjct: 3 TTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAA 62 Query: 621 AIMTLHGRHIYGQAIKVNWASASTQREDTS 710 AI ++ ++G+ I+VN A +E +S Sbjct: 63 AIDNMNESELFGRTIRVNLAKPMRIKEGSS 92
>P20397:NUCL_XENLA Nucleolin - Xenopus laevis (African clawed frog)| Length = 651 Score = 52.8 bits (125), Expect = 5e-06 Identities = 39/162 (24%), Positives = 76/162 (46%), Gaps = 4/162 (2%) Frame = +3 Query: 474 VGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRHIY 653 V N+ + TE+ L EVF+ + + R + F F+++ A A+ + + I Sbjct: 419 VNNLSYSATEDSLREVFEKATSI-RIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIE 477 Query: 654 GQAIKVNWASASTQ----REDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWD 821 G++I++ ++ R ++ +FV LS + + TL F +AR++ D Sbjct: 478 GRSIRLEFSQGGGPQGGGRGGSAQSKTLFVRGLSEDTTEETLKEAFD---GSVNARIVTD 534 Query: 822 NKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 TG S+G+GFV F ++A+ A M + ++ ++A Sbjct: 535 RDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFA 576
>Q920Q6:MSI2H_MOUSE RNA-binding protein Musashi homolog 2 - Mus musculus (Mouse)| Length = 346 Score = 52.8 bits (125), Expect = 5e-06 Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 5/165 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMTL 635 +++G + + + L + F G + C ++R K FGFV + D S + Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 82 Query: 636 HGRHIYGQAIKVNWA-SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 H + + I A Q + + IFVG LS+ + F + DA + Sbjct: 83 H-HELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 141 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 M+D T R RG+GFV+F N+ E + E+ + ++ + C A Sbjct: 142 MFDKTTNRHRGFGFVTFENEDVVE-KVCEIHFHEINNKMVECKKA 185
>Q96DH6:MSI2H_HUMAN RNA-binding protein Musashi homolog 2 - Homo sapiens (Human)| Length = 328 Score = 52.8 bits (125), Expect = 5e-06 Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 5/165 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIMTL 635 +++G + + + L + F G + C ++R K FGFV + D S + Sbjct: 23 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 82 Query: 636 HGRHIYGQAIKVNWA-SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 H + + I A Q + + IFVG LS+ + F + DA + Sbjct: 83 H-HELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAML 141 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 M+D T R RG+GFV+F N+ E + E+ + ++ + C A Sbjct: 142 MFDKTTNRHRGFGFVTFENEDVVE-KVCEIHFHEINNKMVECKKA 185
>Q99069:GRP1_SORBI Glycine-rich RNA-binding protein 1 - Sorghum bicolor (Sorghum)| (Sorghum vulgare) Length = 142 Score = 52.8 bits (125), Expect = 5e-06 Identities = 25/62 (40%), Positives = 39/62 (62%) Frame = +3 Query: 762 TLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCN 941 +L++ FSTY +++++ D +T RSRG+GFV+F ++ +AI M GK L R I N Sbjct: 2 SLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVN 61 Query: 942 WA 947 A Sbjct: 62 EA 63
>Q9JII5:DAZP1_MOUSE DAZ-associated protein 1 - Mus musculus (Mouse)| Length = 406 Score = 52.8 bits (125), Expect = 5e-06 Identities = 45/183 (24%), Positives = 67/183 (36%), Gaps = 4/183 (2%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG L TL + FS Y D +M D T +SRG+GFV F++ T + Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASR 71 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 L R I T + ++ + + SK N Sbjct: 72 PHT-LDGRNIDPKPCTPRGMQPERTRPKEGW------------QKGPRSDSSKSNK---- 114 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGA----IEEVRVQQEKGFGFIRYSTHGEAALA 1250 ++VG + H EL +F GV I + Q+ +GFGFI + A Sbjct: 115 ----IFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQA 170 Query: 1251 IQM 1259 + M Sbjct: 171 VNM 173 Score = 50.8 bits (120), Expect = 2e-05 Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 21/163 (12%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS-----FGFVDYYDQRSAALAIM- 629 ++VG + + T+ L F G V C +I K+K++ FGFV + D + Sbjct: 12 LFVGGLDWSTTQETLRSYFSQYGEVVDC-VIMKDKTTNQSRGFGFVKFKDPNCVGTVLAS 70 Query: 630 ---TLHGRHIYGQAI------------KVNWASASTQREDTSGHFHIFVGDLSSEVNDAT 764 TL GR+I + K W R D+S IFVG + + Sbjct: 71 RPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGP--RSDSSKSNKIFVGGIPHNCGETE 128 Query: 765 LYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAI 893 L F + ++ +++D + R RG+GF++F ++Q + A+ Sbjct: 129 LREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAV 171
>Q22037:ROA1_CAEEL Heterogeneous nuclear ribonucleoprotein A1 - Caenorhabditis elegans| Length = 346 Score = 52.4 bits (124), Expect = 7e-06 Identities = 47/227 (20%), Positives = 93/227 (40%), Gaps = 8/227 (3%) Frame = +3 Query: 399 MTQME-PVSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR---- 563 MT +E NG+ +P R ++VG + N T++L+ E + G + ++R Sbjct: 1 MTDVEIKAENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTT 60 Query: 564 KEKSSFGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF---HIFVG 734 K FGFV + ++ A M I G+ + A + + + ++V Sbjct: 61 KRSRGFGFVTF-SGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVS 119 Query: 735 DLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 914 + + + L F+ Y + + + ++ D T + RG+GFV+F + + + + + Sbjct: 120 GVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMV 179 Query: 915 LGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTG 1055 G RC+ K ++++ N T GG S + G Sbjct: 180 NGH---RCD-VRKGLSKDEMSKAQMNRDRETRGGRSRDGQRGGYNGG 222 Score = 52.4 bits (124), Expect = 7e-06 Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 4/174 (2%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 IFVG L+S D + +S + +D VM D T RSRG+GFV+F + E + A+ + Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ- 83 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 + + + + D AV K E+N Sbjct: 84 ----------------RPHIIDGKTVDPKRAV----------------PRDDKNRSESNV 111 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEV----RVQQEKGFGFIRYSTH 1232 +YV + + D L +F G E+ Q+ +GFGF+ + H Sbjct: 112 STKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDH 165
>P51968:RO31_XENLA Heterogeneous nuclear ribonucleoprotein A3 homolog 1 - Xenopus laevis| (African clawed frog) Length = 373 Score = 52.4 bits (124), Expect = 7e-06 Identities = 46/200 (23%), Positives = 78/200 (39%), Gaps = 7/200 (3%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSA 614 +P R +++G + T++ L E F+ G + C ++R K FGFV Y Sbjct: 22 EPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEV 81 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF---HIFVGDLSSEVNDATLYACFST 785 A M+ + G+ ++ A + H IFVG + + + L + Sbjct: 82 D-ASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYSES 140 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAE 965 Y VM D ++G+ RG+ FV+F + + + + I + A Sbjct: 141 YGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQK------YHTINGHNCEVKKAL 194 Query: 966 EKQETDNHNAVVLTNGGSSN 1025 KQE +A GG SN Sbjct: 195 SKQEMQTASAQRGRGGGGSN 214 Score = 46.2 bits (108), Expect = 5e-04 Identities = 44/196 (22%), Positives = 76/196 (38%), Gaps = 9/196 (4%) Frame = +3 Query: 672 NWASASTQREDTSGHFHI---FVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSR 842 +W S+ Q D + F+G LS E D +L F + +D VM D +T RSR Sbjct: 9 HWPSSDDQGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSR 68 Query: 843 GYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSS 1022 G+GFV++ +E + +++ K G E K+ ++ Sbjct: 69 GFGFVTYSCVEEVDASMSARPHKVDG-----------RVVEPKRAVSREDSA-------- 109 Query: 1023 NAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE- 1199 P + ++VG G + + +E H Y+ G IE + V ++ Sbjct: 110 --------------RPGAHLTVKKIFVG--GIKEDTEEYHLRDYSESYGKIETIEVMEDR 153 Query: 1200 -----KGFGFIRYSTH 1232 +GF F+ + H Sbjct: 154 QSGKKRGFAFVTFDDH 169
>P51990:RO22_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 2 - Xenopus| laevis (African clawed frog) Length = 358 Score = 52.4 bits (124), Expect = 7e-06 Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 7/153 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIM 629 R +++G + TE L ++ G + C ++R K FGFV + A M Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAA-M 67 Query: 630 TLHGRHIYGQAIKVNWASASTQREDTSGHFHI---FVGDLSSEVNDATLYACFSTYPSCS 800 + I G+ ++ A A + H + FVG + + + L F Y Sbjct: 68 SARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIE 127 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++ D ++G+ RG+GFV+F + + + + Sbjct: 128 STEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQ 160
>Q3ZBP3:RBMS1_BOVIN RNA-binding motif, single-stranded-interacting protein 1 - Bos| taurus (Bovine) Length = 403 Score = 52.4 bits (124), Expect = 7e-06 Identities = 37/170 (21%), Positives = 78/170 (45%), Gaps = 4/170 (2%) Frame = +3 Query: 420 SNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGF 587 S+ + G+D + ++Y+ + PN T+ L+++ Q G + K I + ++ +GF Sbjct: 48 SSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGF 107 Query: 588 VDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATL 767 VD+ +A A+ L + Q K Q +D + ++++ +L +++ L Sbjct: 108 VDFDSPAAAQKAVSALKASGVQAQMAK-------QQEQDPT---NLYISNLPLSMDEQEL 157 Query: 768 YACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWL 917 + R++ D+ +G SRG GF + ++ E I GK++ Sbjct: 158 ENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFI 206 Score = 35.4 bits (80), Expect = 0.83 Identities = 20/96 (20%), Positives = 39/96 (40%) Frame = +3 Query: 672 NWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYG 851 N +S+S D ++++ L D L Y + + D T + +GYG Sbjct: 47 NSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYG 106 Query: 852 FVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTN 959 FV F + A+ A++ + + ++ + TN Sbjct: 107 FVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTN 142
>Q6P0B1:CELF2_DANRE CUG-BP- and ETR-3-like factor 2 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 514 Score = 52.4 bits (124), Expect = 7e-06 Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 7/159 (4%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR------KEKSSFGFVDYYDQR 608 DP + ++VG + + +E L E+F+ G V + ++R + FV +Y ++ Sbjct: 40 DPDAIK-MFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYTRK 98 Query: 609 SAALAIMTLHG-RHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFST 785 +A A LH + + G + A +++ + +F+G +S + N+ + FS Sbjct: 99 AALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRVMFSP 158 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 Y + R++ G SRG FV+F + A+ AI M Sbjct: 159 YGQIEECRIL-RGPDGLSRGCAFVTFSTRAMAQNAIKAM 196
>Q5R995:CELF1_PONPY CUG-BP- and ETR-3-like factor 1 - Pongo pygmaeus (Orangutan)| Length = 513 Score = 52.4 bits (124), Expect = 7e-06 Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 7/152 (4%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK------EKSSFGFVDYYDQRSAALAIM 629 ++VG V +E L E+F+ G V ++R + FV +Y +++A A Sbjct: 45 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 104 Query: 630 TLHGRHIY-GQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDA 806 LH + G + A +++ + +F+G +S + + + FS++ + Sbjct: 105 ALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEEC 164 Query: 807 RVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 R++W G SRG V+F + A+TAI M Sbjct: 165 RILW-GPDGLSRGCALVTFTTRAMAQTAIKAM 195 Score = 33.9 bits (76), Expect = 2.4 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 4/95 (4%) Frame = +3 Query: 1023 NAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE- 1199 N + Q G+ + + P+ +++ +L E +L + F G +V + ++ Sbjct: 406 NQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQT 465 Query: 1200 ---KGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 K FGF+ Y A AIQ NG + K +K Sbjct: 466 NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLK 500
>Q08925:YP184_YEAST Uncharacterized RNA-binding protein YPL184C - Saccharomyces| cerevisiae (Baker's yeast) Length = 612 Score = 52.0 bits (123), Expect = 9e-06 Identities = 74/328 (22%), Positives = 137/328 (41%), Gaps = 32/328 (9%) Frame = +3 Query: 420 SNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYY 599 + N P F + R+VY+GNV PN++ L++ + SG VE K+I ++ + FV + Sbjct: 187 AQANNPLNFTSAPSRTVYLGNVPPNLSVKELLDHVR-SGVVEDVKIIPEKMCA--FVSFI 243 Query: 600 DQRSAAL--AIMTLHGRHIYGQAIKVNWASAS------TQREDTSGHF-HIFVGDLS--- 743 D+ +A L + L +I + IK+ W + R T G ++++G ++ Sbjct: 244 DESAALLFHSDAILKRLNIGDRDIKIGWGKPTRIDPIVAARISTDGATRNVYIGRMTIEG 303 Query: 744 --SEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM----- 902 S +++ L Y +++ + +G F+ F + A +T + Sbjct: 304 EESHLSEEQLRVDLEEYGEIDCIKII------KEKGIAFIHFASILNAIKVVTNLPIRNP 357 Query: 903 --TGKWLGSRQIRCNWATKT---NAEE---KQETDNHNAVVLTNGGSSNAAME---ANQD 1049 K + + RC + TKT NA + Q H SNA ++ A Sbjct: 358 YYQNKRIFYGKDRCAFITKTQQHNAAQFLGVQPGMEHMIEFSDREFISNALLQQSAAAAA 417 Query: 1050 TGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYST 1229 + NN TVY+G+L +V +E+ G ++ +++ ++ F+ + Sbjct: 418 IATSAGGPNNLGNRTVYLGSLPKDVKIEEICNAVRG---GLLQSIKLLNDRYVCFVTFID 474 Query: 1230 HGEAALAIQMAN--GLVVRGKPIKCSWG 1307 AA M++ G V+ K K WG Sbjct: 475 PTAAAQFYAMSSLYGFTVQKKRCKVGWG 502
>O13845:RSD1_SCHPO RNA-binding protein rsd1 - Schizosaccharomyces pombe (Fission yeast)| Length = 604 Score = 52.0 bits (123), Expect = 9e-06 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 7/203 (3%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FV L++ + LY F DA+++ D +GRS+G +V F ++ + AI Sbjct: 242 VFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDSVQAAIALS 301 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQ--DTGSKENPEN 1076 + LG I V LT + A EA + S E P Sbjct: 302 GKRLLGLPVI---------------------VQLTEAEKNRKAREAAELARAASAEIP-- 338 Query: 1077 NPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE-----KGFGFIRYSTHGEA 1241 F + V N+ + +++ F G IE V +Q++ KGFG+I+Y A Sbjct: 339 ---FHRLCVSNIHFNLTDEDVKAIFEPF--GDIEFVHLQRDDQNRSKGFGYIQYRNPISA 393 Query: 1242 ALAIQMANGLVVRGKPIKCSWGN 1310 A++ NG + G+ ++ GN Sbjct: 394 RNALEKMNGFDLAGRNMRVCLGN 416 Score = 35.8 bits (81), Expect = 0.64 Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 3/82 (3%) Frame = +3 Query: 474 VGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS---SFGFVDYYDQRSAALAIMTLHGR 644 V N+H N+T+ + +F+ G +E L R +++ FG++ Y + SA A+ ++G Sbjct: 344 VSNIHFNLTDEDVKAIFEPFGDIEFVHLQRDDQNRSKGFGYIQYRNPISARNALEKMNGF 403 Query: 645 HIYGQAIKVNWASASTQREDTS 710 + G+ ++V + E TS Sbjct: 404 DLAGRNMRVCLGNDKFTTETTS 425
>Q6IQ97:RBM4_DANRE RNA-binding protein 4 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 419 Score = 52.0 bits (123), Expect = 9e-06 Identities = 40/143 (27%), Positives = 63/143 (44%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRH 647 ++VGN+ PN T + +F G + C +++ +FGFV + A AI LH Sbjct: 4 IFVGNLSPNTTAEEIRSLFSQYGKISECDIVK----NFGFVHMDSKSEADEAIQNLHHYM 59 Query: 648 IYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNK 827 + G A+ V S + TS H VG++SS + L A F Y + ++ D Sbjct: 60 LNGMAMNV---EMSKGKPKTSTKLH--VGNISSSCTNQELRAKFEEYGPVVECDIVKD-- 112 Query: 828 TGRSRGYGFVSFRNQQEAETAIT 896 Y FV ++A AI+ Sbjct: 113 ------YAFVHMERVEDAMEAIS 129
>Q09702:NRD1_SCHPO Negative regulator of differentiation 1 - Schizosaccharomyces pombe| (Fission yeast) Length = 529 Score = 52.0 bits (123), Expect = 9e-06 Identities = 69/318 (21%), Positives = 124/318 (38%), Gaps = 25/318 (7%) Frame = +3 Query: 429 NLPPGFDP------STCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSF-GF 587 N PG+ P ++VYVGN+ PN + ++ + +GP+E ++ ++ +F F Sbjct: 98 NFAPGYFPLPNNTTQPVKTVYVGNLPPNTPIDEILSCVR-TGPIESAWILPEKNCAFISF 156 Query: 588 VDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQR-------EDTSGHFHIFVGDLSS 746 +D +A L I G +KV W S + + ++F+G+L + Sbjct: 157 LD-PSHATAFFQDAALKRLTIRGTEVKVGWGKNSASNSSVLLAVQQSGACRNVFLGNLPN 215 Query: 747 EVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE--MTGKWLG 920 + + + + +++ + R FV F N A A+ E + KW Sbjct: 216 GITEDEIREDLEPFGPIDQIKIVTE------RNIAFVHFLNIAAAIKAVQELPLNPKWSK 269 Query: 921 SR----QIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQD---TGSKENPENN 1079 R + RC K A + G + + D TG++ Sbjct: 270 RRIYYGRDRCAVGLKQPAYFSKGQVGVVGGYPVMGYPPPSPVLQKPDLIMTGNR------ 323 Query: 1080 PDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQM 1259 TVY+GN+ + +E+ G + +R QEK F+ + A +M Sbjct: 324 ----TVYIGNIHADTTIEEICNAVRG---GLLHNIRYLQEKHICFVTFVDPVSAFRFFEM 376 Query: 1260 AN--GLVVRGKPIKCSWG 1307 +N GLV+R + +K WG Sbjct: 377 SNIHGLVIRNRRLKIGWG 394
>Q44554:RBPB_ANASP Putative RNA-binding protein rbpB - Anabaena sp. (strain PCC 7120)| Length = 103 Score = 51.6 bits (122), Expect = 1e-05 Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 I+VG+LS +V + +L A F+ Y S ++ D +TGR RG+GFV + E AI + Sbjct: 3 IYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEAL 62 Query: 903 TG-KWLGSRQIRCNWA 947 G +W+G R ++ N A Sbjct: 63 DGAEWMG-RDLKVNKA 77 Score = 45.4 bits (106), Expect = 8e-04 Identities = 36/98 (36%), Positives = 48/98 (48%), Gaps = 4/98 (4%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKL-IRKEKS---SFGFVDYYDQRSAALAIMT 632 S+YVGN+ +VTE L VF G V+R +L + +E FGFV+ AI Sbjct: 2 SIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEA 61 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSS 746 L G G+ +KVN A RED G F G+ S+ Sbjct: 62 LDGAEWMGRDLKVNKAK---PREDRGGSRGSFGGNRSN 96 Score = 38.9 bits (89), Expect = 0.075 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGEAALAIQM 1259 ++YVGNL ++V + L+ F G ++ V +E +GFGF+ + E AI+ Sbjct: 2 SIYVGNLSYDVTEESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEA 61 Query: 1260 ANGLVVRGKPIK 1295 +G G+ +K Sbjct: 62 LDGAEWMGRDLK 73
>Q3MHY8:RBM7_BOVIN RNA-binding protein 7 - Bos taurus (Bovine)| Length = 262 Score = 51.6 bits (122), Expect = 1e-05 Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 4/81 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEK----SSFGFVDYYDQRSAALAIM 629 R+++VGN+ VTE LL E+F +GPV + K I K+K F FV++ + S A+ Sbjct: 10 RTLFVGNLETKVTEELLFELFHQAGPVIKVK-IPKDKDGKPKQFAFVNFKHEVSVPYAMN 68 Query: 630 TLHGRHIYGQAIKVNWASAST 692 L+G ++G+ IK+ + + S+ Sbjct: 69 LLNGIKLFGRPIKIQFRAGSS 89 Score = 35.4 bits (80), Expect = 0.83 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 5/73 (6%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKG-----FGFIRYSTHGEAALAIQ 1256 T++VGNL +V + L F+ G + +V++ ++K F F+ + A+ Sbjct: 11 TLFVGNLETKVTEELLFELFHQ--AGPVIKVKIPKDKDGKPKQFAFVNFKHEVSVPYAMN 68 Query: 1257 MANGLVVRGKPIK 1295 + NG+ + G+PIK Sbjct: 69 LLNGIKLFGRPIK 81
>Q8C5L7:RBM34_MOUSE RNA-binding protein 34 - Mus musculus (Mouse)| Length = 375 Score = 51.6 bits (122), Expect = 1e-05 Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 21/176 (11%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCK----------LIRK-----------EKSS 578 R+V+VGN+ + L F+ G VE + L +K +KS Sbjct: 189 RTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLTKKLAAIKRKFHPDQKSI 248 Query: 579 FGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVND 758 +V + D+ +AA A+ + G I+V+ AS + R+ S +FVG+L ++ D Sbjct: 249 NAYVVFKDESAAAKALQRNGAQIAEGFRIRVDLASETASRDKRS----VFVGNLPYKIED 304 Query: 759 ATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSR 926 + L F S R++ + TG RG+G+V F N A+ + +G + Sbjct: 305 SALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRK 360 Score = 34.7 bits (78), Expect = 1.4 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 6/67 (8%) Frame = +3 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE------KGFGFIRYSTHGEAA 1244 D +V+VGNL +++ L HF L G+I VR+ + +GFG++ + Sbjct: 289 DKRSVFVGNLPYKIEDSALEEHF--LDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVH 346 Query: 1245 LAIQMAN 1265 LA+++ N Sbjct: 347 LALKLNN 353
>Q62504:MINT_MOUSE Msx2-interacting protein - Mus musculus (Mouse)| Length = 3644 Score = 51.6 bits (122), Expect = 1e-05 Identities = 38/171 (22%), Positives = 77/171 (45%), Gaps = 1/171 (0%) Frame = +3 Query: 444 FDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR-KEKSSFGFVDYYDQRSAAL 620 F P R++++GN+ T + L +FQ G + + + + F+ Y D S Sbjct: 433 FHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCK 492 Query: 621 AIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCS 800 AI + G ++ +K+ + + +++ LSS V+D L F Y Sbjct: 493 AIKKMDGEYLGNNRLKLGFGKSMPTN-------CVWLDGLSSNVSDQYLTRHFCRYGPV- 544 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 953 +V++D R +G V + ++A+ A+ E G+ +G +I+ ++A + Sbjct: 545 -VKVVFD----RLKGMALVLYSEIEDAQAAVKETKGRKIGGNKIKVDFANR 590
>O04425:FCA_ARATH Flowering time control protein FCA - Arabidopsis thaliana| (Mouse-ear cress) Length = 747 Score = 51.6 bits (122), Expect = 1e-05 Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 7/163 (4%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFG----FVDYYDQRSA 614 D S+ ++VG+V TE + F+ G V LI+ +++ FV Y + A Sbjct: 115 DRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTGQQQGCCFVKYATSKDA 174 Query: 615 ALAIMTLHGRHIYGQA---IKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFST 785 AI LH + ++V +A +R T F +FVG L+ + + + F Sbjct: 175 DRAIRALHNQITLPGGTGPVQVRYADGERERIGTL-EFKLFVGSLNKQATEKEVEEIFLQ 233 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKW 914 + D +M D +SRG GFV + +++ A AI + G + Sbjct: 234 FGHVEDVYLMRDEYR-QSRGCGFVKYSSKETAMAAIDGLNGTY 275 Score = 46.2 bits (108), Expect = 5e-04 Identities = 45/210 (21%), Positives = 81/210 (38%), Gaps = 5/210 (2%) Frame = +3 Query: 654 GQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTG 833 G I + + T D S +FVG + + + F + + + ++ D +TG Sbjct: 99 GYPISDHGSFTGTDVSDRSSTVKLFVGSVPRTATEEEIRPYFEQHGNVLEVALIKDKRTG 158 Query: 834 RSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNG 1013 + +G FV + ++A+ AI + HN + L G Sbjct: 159 QQQGCCFVKYATSKDADRAIRAL----------------------------HNQITLPGG 190 Query: 1014 GSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEV--- 1184 ++ G +E +F ++VG+L + E+ F L G +E+V Sbjct: 191 ---TGPVQVRYADGERER-IGTLEF-KLFVGSLNKQATEKEVEEIF--LQFGHVEDVYLM 243 Query: 1185 --RVQQEKGFGFIRYSTHGEAALAIQMANG 1268 +Q +G GF++YS+ A AI NG Sbjct: 244 RDEYRQSRGCGFVKYSSKETAMAAIDGLNG 273
>Q5R9H4:ACF_PONPY APOBEC1 complementation factor - Pongo pygmaeus (Orangutan)| Length = 587 Score = 51.6 bits (122), Expect = 1e-05 Identities = 69/308 (22%), Positives = 125/308 (40%), Gaps = 18/308 (5%) Frame = +3 Query: 426 GNLPPGFD---PSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGF 587 G PPG+D P +++G + ++ E+ LI + + G + +++ + F Sbjct: 41 GGPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAF 100 Query: 588 VDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVG---------DL 740 V + ++ A AI L+ I + AS R +FVG ++ Sbjct: 101 VTFSNKLEAKNAIKQLNNYEIRNGRLLGVCASVDNCR--------LFVGGIPKTKKREEI 152 Query: 741 SSEVNDATLYAC-FSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMT-GK- 911 SE+ T YPS +D KT ++RG+ FV + + + A A ++ G+ Sbjct: 153 LSEMKKVTEGVVDVIVYPSAAD-------KT-KNRGFAFVEYESHRAAAMARRKLLPGRI 204 Query: 912 WLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFT 1091 L I +WA +E ++DT S Sbjct: 205 QLWGHPIAVDWA-------------------------EPEVEVDEDTMSSVK-------- 231 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGL 1271 +YV NL + + + + F N+ GA+E RV++ + + F+ +S +A A++ NG Sbjct: 232 ILYVRNLMLSTSEEMIEKEFNNIKPGAVE--RVKKIRDYAFVHFSNREDAVEAMKALNGK 289 Query: 1272 VVRGKPIK 1295 V+ G PI+ Sbjct: 290 VLDGSPIE 297 Score = 44.7 bits (104), Expect = 0.001 Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 4/234 (1%) Frame = +3 Query: 417 VSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDY 596 V N L G P T + + + VTE + ++V ++ K F FV+Y Sbjct: 133 VDNCRLFVGGIPKTKKREEILSEMKKVTEGV-VDVIVYPSAADKTK-----NRGFAFVEY 186 Query: 597 YDQRSAALA-IMTLHGR-HIYGQAIKVNWASASTQ-REDTSGHFHI-FVGDLSSEVNDAT 764 R+AA+A L GR ++G I V+WA + EDT I +V +L ++ Sbjct: 187 ESHRAAAMARRKLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEM 246 Query: 765 LYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 944 + F+ + RV + R Y FV F N+++A A+ + GK L I Sbjct: 247 IEKEFNNIKPGAVERVK------KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTL 300 Query: 945 ATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVG 1106 A + D + V T G M + T S D TT Y+G Sbjct: 301 A--------KPVDKDSYVRYTRGTGGRGTMLQGEYTYSLGQVY---DPTTTYLG 343
>P53316:YG5B_YEAST Uncharacterized RNA-binding protein YGR250C - Saccharomyces| cerevisiae (Baker's yeast) Length = 781 Score = 51.2 bits (121), Expect = 1e-05 Identities = 51/237 (21%), Positives = 89/237 (37%), Gaps = 49/237 (20%) Frame = +3 Query: 720 HIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 +IFVG ++ ++ L FS Y ++++D G GYGF+S+ +A I E Sbjct: 196 NIFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKE 255 Query: 900 MTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENN 1079 + G+ + + N+ + E+ D+ KEN N+ Sbjct: 256 LNGRTVNGSTLFINYHVERKERERIHWDH-----------------------VKEN-NND 291 Query: 1080 PDFTTVYVGNLGH----------------EVNRDELHRHFYNLGV--------------- 1166 +F +++GNL + EV + EL + F + + Sbjct: 292 DNFRCLFIGNLPYHNPEKVETLITPKEVIEVIKKELSKKFPDFDIISYYFPKRSNTRSSS 351 Query: 1167 -------GAIEEVR--------VQQE---KGFGFIRYSTHGEAALAIQMANGLVVRG 1283 G++E + Q E KG+GFI+ H +A AI+ NG + G Sbjct: 352 SVSFNEEGSVESNKSSNNTNGNAQDEDMLKGYGFIKLINHEQALAAIETFNGFMWHG 408 Score = 42.0 bits (97), Expect = 0.009 Identities = 56/276 (20%), Positives = 106/276 (38%), Gaps = 61/276 (22%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLI----RKEKSSFGFVDYYDQRSAALAIMT 632 +++VG + +++ L +F GP+ KLI + E + +GF+ Y A+L I Sbjct: 196 NIFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKE 255 Query: 633 LHGRHIYGQAIKVNWASASTQRE----------DTSGHFH-IFVG--------------- 734 L+GR + G + +N+ +RE + +F +F+G Sbjct: 256 LNGRTVNGSTLFINYHVERKERERIHWDHVKENNNDDNFRCLFIGNLPYHNPEKVETLIT 315 Query: 735 ----------DLSSEVNDATLYACF---------STYPSCSDARVMWDNKTGRS------ 839 +LS + D + + + S+ S ++ + NK+ + Sbjct: 316 PKEVIEVIKKELSKKFPDFDIISYYFPKRSNTRSSSSVSFNEEGSVESNKSSNNTNGNAQ 375 Query: 840 -----RGYGFVSFRNQQEAETAITEMTG-KWLGSRQIRCNWATKTNAEEKQETDNHNAVV 1001 +GYGF+ N ++A AI G W G+R + A + + +NHN+ Sbjct: 376 DEDMLKGYGFIKLINHEQALAAIETFNGFMWHGNRLV------VNKAVQHKVYNNHNSHD 429 Query: 1002 LTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGN 1109 S++ ME + + NN + Y N Sbjct: 430 RHPSISNHNDMEVLEFANNPMYDYNNYTYDRYYFNN 465 Score = 33.1 bits (74), Expect = 4.1 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 7/63 (11%) Frame = +3 Query: 819 DNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQI-RCNWATK------TNAEEKQE 977 D G SRGYGFVSF + +A AI G + Q+ ++A K ++ +++ + Sbjct: 593 DLPVGSSRGYGFVSFESPLDAAKAILNTDGYQVSKDQVLSVSFAQKRGNLSSSDDDDQSQ 652 Query: 978 TDN 986 TDN Sbjct: 653 TDN 655
>Q9TTV2:ROA2_SAGOE Heterogeneous nuclear ribonucleoproteins A2/B1 - Saguinus oedipus| (Cotton-top tamarin) Length = 341 Score = 51.2 bits (121), Expect = 1e-05 Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 7/153 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIM 629 R +++G + TE L ++ G + C ++R K FGFV + A M Sbjct: 9 RKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAA-M 67 Query: 630 TLHGRHIYGQAIKVNWASASTQREDTSGHFHI---FVGDLSSEVNDATLYACFSTYPSCS 800 I G+ ++ A A + H + FVG + + + L F+ Y Sbjct: 68 AARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFAEYGKID 127 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++ D ++G+ RG+GFV+F + + + + Sbjct: 128 TIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 160
>P04256:ROA1_RAT Heterogeneous nuclear ribonucleoprotein A1 - Rattus norvegicus| (Rat) Length = 320 Score = 51.2 bits (121), Expect = 1e-05 Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 7/158 (4%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSA 614 +P R +++G + T+ L F+ G + C ++R K FGFV Y Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF---HIFVGDLSSEVNDATLYACFST 785 A M + G+ ++ A + + H IFVG + + + L F Sbjct: 69 DAA-MNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 Y +M D +G+ RG+ FV+F + + + + Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 165 Score = 34.3 bits (77), Expect = 1.9 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Frame = +3 Query: 1062 ENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGV----GAIEEVRVQQEKGFGFIRYST 1229 E+P+ +++G L E + L HF G + + ++ +GFGF+ Y+T Sbjct: 5 ESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAT 64 Query: 1230 HGEAALAI 1253 E A+ Sbjct: 65 VEEVDAAM 72
>P49312:ROA1_MOUSE Heterogeneous nuclear ribonucleoprotein A1 - Mus musculus (Mouse)| Length = 320 Score = 51.2 bits (121), Expect = 1e-05 Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 7/158 (4%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSA 614 +P R +++G + T+ L F+ G + C ++R K FGFV Y Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF---HIFVGDLSSEVNDATLYACFST 785 A M + G+ ++ A + + H IFVG + + + L F Sbjct: 69 DAA-MNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 Y +M D +G+ RG+ FV+F + + + + Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 165 Score = 34.3 bits (77), Expect = 1.9 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Frame = +3 Query: 1062 ENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGV----GAIEEVRVQQEKGFGFIRYST 1229 E+P+ +++G L E + L HF G + + ++ +GFGF+ Y+T Sbjct: 5 ESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAT 64 Query: 1230 HGEAALAI 1253 E A+ Sbjct: 65 VEEVDAAM 72
>Q28521:ROA1_MACMU Heterogeneous nuclear ribonucleoprotein A1 - Macaca mulatta (Rhesus| macaque) Length = 320 Score = 51.2 bits (121), Expect = 1e-05 Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 7/158 (4%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSA 614 +P R +++G + T+ L F+ G + C ++R K FGFV Y Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKV 68 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF---HIFVGDLSSEVNDATLYACFST 785 A M + G+ ++ A + + H IFVG + + + L F Sbjct: 69 DAA-MNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 Y +M D +G+ RG+ FV+F + + + + Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQ 165 Score = 33.5 bits (75), Expect = 3.2 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Frame = +3 Query: 1062 ENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGV----GAIEEVRVQQEKGFGFIRYST 1229 E+P+ +++G L E + L HF G + + ++ +GFGF+ Y+T Sbjct: 5 ESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAT 64
>P09651:ROA1_HUMAN Heterogeneous nuclear ribonucleoprotein A1 - Homo sapiens (Human)| Length = 372 Score = 51.2 bits (121), Expect = 1e-05 Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 7/158 (4%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSA 614 +P R +++G + T+ L F+ G + C ++R K FGFV Y Sbjct: 9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 68 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF---HIFVGDLSSEVNDATLYACFST 785 A M + G+ ++ A + + H IFVG + + + L F Sbjct: 69 DAA-MNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 127 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 Y +M D +G+ RG+ FV+F + + + + Sbjct: 128 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 165 Score = 34.3 bits (77), Expect = 1.9 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Frame = +3 Query: 1062 ENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGV----GAIEEVRVQQEKGFGFIRYST 1229 E+P+ +++G L E + L HF G + + ++ +GFGF+ Y+T Sbjct: 5 ESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAT 64 Query: 1230 HGEAALAI 1253 E A+ Sbjct: 65 VEEVDAAM 72
>P09867:ROA1_BOVIN Heterogeneous nuclear ribonucleoprotein A1 - Bos taurus (Bovine)| Length = 195 Score = 51.2 bits (121), Expect = 1e-05 Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 7/158 (4%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSA 614 +P R +++G + T+ L F+ G + C ++R K FGFV Y Sbjct: 8 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV 67 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHF---HIFVGDLSSEVNDATLYACFST 785 A M + G+ ++ A + + H IFVG + + + L F Sbjct: 68 DAA-MNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQ 126 Query: 786 YPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 Y +M D +G+ RG+ FV+F + + + + Sbjct: 127 YGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ 164 Score = 34.3 bits (77), Expect = 1.9 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 4/68 (5%) Frame = +3 Query: 1062 ENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGV----GAIEEVRVQQEKGFGFIRYST 1229 E+P+ +++G L E + L HF G + + ++ +GFGF+ Y+T Sbjct: 4 ESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYAT 63 Query: 1230 HGEAALAI 1253 E A+ Sbjct: 64 VEEVDAAM 71
>Q15414:RBY1A_HUMAN RNA-binding motif protein, Y chromosome, family 1 member A1 - Homo| sapiens (Human) Length = 496 Score = 51.2 bits (121), Expect = 1e-05 Identities = 26/77 (33%), Positives = 44/77 (57%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +F+G L+ E N+ L A F + S+ ++ D +T +SRG+ F++F N +A+ A +M Sbjct: 10 LFIGGLNRETNEKMLKAVFGKHGPISEVLLIKD-RTSKSRGFAFITFENPADAKNAAKDM 68 Query: 903 TGKWLGSRQIRCNWATK 953 GK L + I+ A K Sbjct: 69 NGKSLHGKAIKVEQAKK 85 Score = 39.7 bits (91), Expect = 0.044 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS---FGFVDYYDQRSAALAIMTLH 638 +++G ++ E +L VF GP+ LI+ S F F+ + + A A ++ Sbjct: 10 LFIGGLNRETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMN 69 Query: 639 GRHIYGQAIKVNWA 680 G+ ++G+AIKV A Sbjct: 70 GKSLHGKAIKVEQA 83
>Q4R979:RBM4_MACFA RNA-binding protein 4 - Macaca fascicularis (Crab eating macaque)| (Cynomolgus monkey) Length = 364 Score = 51.2 bits (121), Expect = 1e-05 Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 5/153 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRH 647 +++GN+ TE + +F+ G V C +I+ ++GFV D+ +A AI LH Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIK----NYGFVHIEDKTAAEDAIRNLHHYK 59 Query: 648 IYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNK 827 ++G I V AS + TS H VG++S + L A F Y + ++ D Sbjct: 60 LHGVNINV---EASKNKSKTSTKLH--VGNISPTCTNKELRAKFEEYGPVIECDIVKD-- 112 Query: 828 TGRSRGYGFVSFRNQQEAETAI-----TEMTGK 911 Y FV ++A AI TE GK Sbjct: 113 ------YAFVHMERAEDAVEAIRGLDNTEFQGK 139 Score = 32.3 bits (72), Expect = 7.1 Identities = 20/77 (25%), Positives = 33/77 (42%) Frame = +3 Query: 456 TCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTL 635 T ++VGN+ P T L F+ GPV C +++ + FV A AI L Sbjct: 76 TSTKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK----DYAFVHMERAEDAVEAIRGL 131 Query: 636 HGRHIYGQAIKVNWASA 686 G+ + V +++ Sbjct: 132 DNTEFQGKRMHVQLSTS 148
>Q9BWF3:RBM4_HUMAN RNA-binding protein 4 - Homo sapiens (Human)| Length = 364 Score = 51.2 bits (121), Expect = 1e-05 Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 5/153 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRH 647 +++GN+ TE + +F+ G V C +I+ ++GFV D+ +A AI LH Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIK----NYGFVHIEDKTAAEDAIRNLHHYK 59 Query: 648 IYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNK 827 ++G I V AS + TS H VG++S + L A F Y + ++ D Sbjct: 60 LHGVNINV---EASKNKSKTSTKLH--VGNISPTCTNKELRAKFEEYGPVIECDIVKD-- 112 Query: 828 TGRSRGYGFVSFRNQQEAETAI-----TEMTGK 911 Y FV ++A AI TE GK Sbjct: 113 ------YAFVHMERAEDAVEAIRGLDNTEFQGK 139 Score = 32.3 bits (72), Expect = 7.1 Identities = 20/77 (25%), Positives = 33/77 (42%) Frame = +3 Query: 456 TCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTL 635 T ++VGN+ P T L F+ GPV C +++ + FV A AI L Sbjct: 76 TSTKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK----DYAFVHMERAEDAVEAIRGL 131 Query: 636 HGRHIYGQAIKVNWASA 686 G+ + V +++ Sbjct: 132 DNTEFQGKRMHVQLSTS 148
>Q3MHX3:RBM4_BOVIN RNA-binding protein 4 - Bos taurus (Bovine)| Length = 362 Score = 51.2 bits (121), Expect = 1e-05 Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 5/153 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRH 647 +++GN+ TE + +F+ G V C +I+ ++GFV D+ +A AI LH Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIK----NYGFVHIEDKTAAEDAIRNLHHYK 59 Query: 648 IYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNK 827 ++G I V AS + TS H VG++S + L A F Y + ++ D Sbjct: 60 LHGVNINV---EASKNKSKTSTKLH--VGNISPTCTNKELRAKFEEYGPVIECDIVKD-- 112 Query: 828 TGRSRGYGFVSFRNQQEAETAI-----TEMTGK 911 Y FV ++A AI TE GK Sbjct: 113 ------YAFVHMERAEDAVEAIRGLDNTEFQGK 139 Score = 32.3 bits (72), Expect = 7.1 Identities = 20/77 (25%), Positives = 33/77 (42%) Frame = +3 Query: 456 TCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTL 635 T ++VGN+ P T L F+ GPV C +++ + FV A AI L Sbjct: 76 TSTKLHVGNISPTCTNKELRAKFEEYGPVIECDIVK----DYAFVHMERAEDAVEAIRGL 131 Query: 636 HGRHIYGQAIKVNWASA 686 G+ + V +++ Sbjct: 132 DNTEFQGKRMHVQLSTS 148
>Q3B7L8:RBM22_BOVIN Pre-mRNA-splicing factor RBM22 - Bos taurus (Bovine)| Length = 420 Score = 51.2 bits (121), Expect = 1e-05 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 1/82 (1%) Frame = +3 Query: 1065 NPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAA 1244 +P + TT+YVG LG + +L HFY G I + V Q + FI+++T A Sbjct: 224 DPPEDKTITTLYVGGLGDTITETDLRNHFYQF--GEIRTITVVQRQQCAFIQFATRQAAE 281 Query: 1245 LAIQMA-NGLVVRGKPIKCSWG 1307 +A + + N +V G+ + WG Sbjct: 282 VAAEKSFNKFIVNGRRLNVKWG 303
>Q7TN33:CELF6_MOUSE CUG-BP- and ETR-3-like factor 6 - Mus musculus (Mouse)| Length = 460 Score = 51.2 bits (121), Expect = 1e-05 Identities = 29/81 (35%), Positives = 44/81 (54%) Frame = +3 Query: 693 QREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQ 872 QRE G ++F+ L E DA L F + + A+V D T +S+ +GFVSF N Sbjct: 368 QREGPEG-CNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKCFGFVSFDNP 426 Query: 873 QEAETAITEMTGKWLGSRQIR 935 A+TAI M G +G ++++ Sbjct: 427 TSAQTAIQAMNGFQIGMKRLK 447 Score = 33.9 bits (76), Expect = 2.4 Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 5/187 (2%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG + +++ L F + + V+ D TG +G F+++ + A A + + Sbjct: 48 LFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARDSALKAQSAL 107 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 E++ N + +S E + Sbjct: 108 --------------------HEQKTLPGMNRPIQVKPAASEGRGEDRK------------ 135 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE-----KGFGFIRYSTHGEAAL 1247 ++VG LG + +++ R F G IEE V + KG F+++ + GEA Sbjct: 136 ----LFVGMLGKQQGEEDVRRLFQPFG--HIEECTVLRSPDGTSKGCAFVKFGSQGEAQA 189 Query: 1248 AIQMANG 1268 AIQ +G Sbjct: 190 AIQGLHG 196 Score = 33.1 bits (74), Expect = 4.1 Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 4/99 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGFVDYYDQRSAALAIMT 632 R ++VG + E + +FQ G +E C ++R FV + Q A AI Sbjct: 134 RKLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSPDGTSKGCAFVKFGSQGEAQAAIQG 193 Query: 633 LHG-RHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSS 746 LHG R + G + + A T RE G L + Sbjct: 194 LHGSRTMTGASSSLVVKLADTDRERALRRMQQMAGQLGA 232 Score = 32.3 bits (72), Expect = 7.1 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 4/90 (4%) Frame = +3 Query: 1038 ANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQ----QEKG 1205 + Q + + P+ +++ +L E EL + F G +V V Q K Sbjct: 358 SQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSKC 417 Query: 1206 FGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 FGF+ + A AIQ NG + K +K Sbjct: 418 FGFVSFDNPTSAQTAIQAMNGFQIGMKRLK 447
>Q5F3T7:CELF1_CHICK CUG-BP- and ETR-3-like factor 1 - Gallus gallus (Chicken)| Length = 489 Score = 51.2 bits (121), Expect = 1e-05 Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 7/152 (4%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK------EKSSFGFVDYYDQRSAALAIM 629 ++VG V + E L E+F+ G V ++R + FV +Y +++A A Sbjct: 18 MFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77 Query: 630 TLHGRHIY-GQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDA 806 LH I G + A +++ + +F+G +S + N+ + FS + + Sbjct: 78 ALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCNENDIRVMFSPFGQIEEC 137 Query: 807 RVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 R++ G SRG FV+F + A+TAI M Sbjct: 138 RIL-RGPDGLSRGCAFVTFTTRAMAQTAIKAM 168 Score = 35.0 bits (79), Expect = 1.1 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 4/95 (4%) Frame = +3 Query: 1023 NAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE- 1199 N ++ Q G+ + + P+ +++ +L E +L + F G +V + ++ Sbjct: 382 NQSLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQT 441 Query: 1200 ---KGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 K FGF+ Y A AIQ NG + K +K Sbjct: 442 NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLK 476
>Q5RBU8:ROA2_PONPY Heterogeneous nuclear ribonucleoproteins A2/B1 - Pongo pygmaeus| (Orangutan) Length = 353 Score = 50.8 bits (120), Expect = 2e-05 Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 7/153 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIM 629 R +++G + TE L ++ G + C ++R K FGFV + A M Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAA-M 79 Query: 630 TLHGRHIYGQAIKVNWASASTQREDTSGHFHI---FVGDLSSEVNDATLYACFSTYPSCS 800 I G+ ++ A A + H + FVG + + + L F Y Sbjct: 80 AARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKID 139 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++ D ++G+ RG+GFV+F + + + + Sbjct: 140 TIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 172
>O88569:ROA2_MOUSE Heterogeneous nuclear ribonucleoproteins A2/B1 - Mus musculus| (Mouse) Length = 353 Score = 50.8 bits (120), Expect = 2e-05 Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 7/153 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIM 629 R +++G + TE L ++ G + C ++R K FGFV + A M Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAA-M 79 Query: 630 TLHGRHIYGQAIKVNWASASTQREDTSGHFHI---FVGDLSSEVNDATLYACFSTYPSCS 800 I G+ ++ A A + H + FVG + + + L F Y Sbjct: 80 AARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKID 139 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++ D ++G+ RG+GFV+F + + + + Sbjct: 140 TIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 172
>P22626:ROA2_HUMAN Heterogeneous nuclear ribonucleoproteins A2/B1 - Homo sapiens| (Human) Length = 353 Score = 50.8 bits (120), Expect = 2e-05 Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 7/153 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIM 629 R +++G + TE L ++ G + C ++R K FGFV + A M Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAA-M 79 Query: 630 TLHGRHIYGQAIKVNWASASTQREDTSGHFHI---FVGDLSSEVNDATLYACFSTYPSCS 800 I G+ ++ A A + H + FVG + + + L F Y Sbjct: 80 AARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKID 139 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++ D ++G+ RG+GFV+F + + + + Sbjct: 140 TIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 172
>Q2HJ60:ROA2_BOVIN Heterogeneous nuclear ribonucleoproteins A2/B1 - Bos taurus| (Bovine) Length = 341 Score = 50.8 bits (120), Expect = 2e-05 Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 7/153 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIM 629 R +++G + TE L ++ G + C ++R K FGFV + A M Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAA-M 67 Query: 630 TLHGRHIYGQAIKVNWASASTQREDTSGHFHI---FVGDLSSEVNDATLYACFSTYPSCS 800 I G+ ++ A A + H + FVG + + + L F Y Sbjct: 68 AARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKID 127 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++ D ++G+ RG+GFV+F + + + + Sbjct: 128 TIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 160
>Q6NZZ9:RBM22_DANRE Pre-mRNA-splicing factor RBM22 - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 425 Score = 50.8 bits (120), Expect = 2e-05 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%) Frame = +3 Query: 1074 NNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAI 1253 ++ TT+Y+G LG V EL HFY G I + + Q + FI+++T A A Sbjct: 227 DDKSITTLYIGGLGENVTDSELRNHFYQF--GEIRTITIVQRQQCAFIQFATRQAAETAA 284 Query: 1254 QMA-NGLVVRGKPIKCSWG 1307 + + N L++ G+ + WG Sbjct: 285 EKSFNKLIINGRRLNVKWG 303
>Q6PF35:CEL1B_XENLA CUG-BP- and ETR-3-like factor 1-B - Xenopus laevis (African clawed| frog) Length = 489 Score = 50.8 bits (120), Expect = 2e-05 Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 8/168 (4%) Frame = +3 Query: 423 NGNLP-PGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR------KEKSSF 581 NG + P S ++VG V + +E L E+F+ G V ++R + Sbjct: 2 NGTMDHPDHPDSDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGC 61 Query: 582 GFVDYYDQRSAALAIMTLHGRHIY-GQAIKVNWASASTQREDTSGHFHIFVGDLSSEVND 758 F+ +Y +++A A LH + G + A +++ + +F+G +S + N+ Sbjct: 62 CFITFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMVSKKCNE 121 Query: 759 ATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 + FS + ++R++ G SRG F++F + A+ AI M Sbjct: 122 NDIRTLFSQFGQIEESRIL-RGPDGMSRGCAFITFTTRSMAQMAIKAM 168 Score = 35.0 bits (79), Expect = 1.1 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 4/95 (4%) Frame = +3 Query: 1023 NAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE- 1199 N ++ + Q G+ + + P+ +++ +L E +L + F G +V + ++ Sbjct: 382 NQSLLSQQGLGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQT 441 Query: 1200 ---KGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 K FGFI Y A AIQ NG + K +K Sbjct: 442 NLSKCFGFISYDNPVSAQAAIQSMNGFQIGMKRLK 476
>Q9NQ94:ACF_HUMAN APOBEC1 complementation factor - Homo sapiens (Human)| Length = 594 Score = 50.8 bits (120), Expect = 2e-05 Identities = 69/308 (22%), Positives = 125/308 (40%), Gaps = 18/308 (5%) Frame = +3 Query: 426 GNLPPGFD---PSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGF 587 G PPG+D P +++G + ++ E+ LI + + G + +++ + F Sbjct: 41 GGPPPGWDAAPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAF 100 Query: 588 VDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVG---------DL 740 V + ++ A AI L+ I + AS R +FVG ++ Sbjct: 101 VTFSNKVEAKNAIKQLNNYEIRNGRLLGVCASVDNCR--------LFVGGIPKTKKREEI 152 Query: 741 SSEVNDATLYAC-FSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMT-GK- 911 SE+ T YPS +D KT ++RG+ FV + + + A A ++ G+ Sbjct: 153 LSEMKKVTEGVVDVIVYPSAAD-------KT-KNRGFAFVEYESHRAAAMARRKLLPGRI 204 Query: 912 WLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFT 1091 L I +WA +E ++DT S Sbjct: 205 QLWGHGIAVDWA-------------------------EPEVEVDEDTMSSVK-------- 231 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGL 1271 +YV NL + + + + F N+ GA+E RV++ + + F+ +S +A A++ NG Sbjct: 232 ILYVRNLMLSTSEEMIEKEFNNIKPGAVE--RVKKIRDYAFVHFSNREDAVEAMKALNGK 289 Query: 1272 VVRGKPIK 1295 V+ G PI+ Sbjct: 290 VLDGSPIE 297 Score = 45.1 bits (105), Expect = 0.001 Identities = 61/234 (26%), Positives = 93/234 (39%), Gaps = 4/234 (1%) Frame = +3 Query: 417 VSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDY 596 V N L G P T + + + VTE + ++V ++ K F FV+Y Sbjct: 133 VDNCRLFVGGIPKTKKREEILSEMKKVTEGV-VDVIVYPSAADKTK-----NRGFAFVEY 186 Query: 597 YDQRSAALA-IMTLHGR-HIYGQAIKVNWASASTQ-REDTSGHFHI-FVGDLSSEVNDAT 764 R+AA+A L GR ++G I V+WA + EDT I +V +L ++ Sbjct: 187 ESHRAAAMARRKLLPGRIQLWGHGIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEM 246 Query: 765 LYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 944 + F+ + RV + R Y FV F N+++A A+ + GK L I Sbjct: 247 IEKEFNNIKPGAVERVK------KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTL 300 Query: 945 ATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVG 1106 A + D + V T G M + T S D TT Y+G Sbjct: 301 A--------KPVDKDSYVRYTRGTGGRGTMLQGEYTYSLGQVY---DPTTTYLG 343
>P38760:YHH5_YEAST Uncharacterized RNA-binding protein YHR015W - Saccharomyces| cerevisiae (Baker's yeast) Length = 659 Score = 50.4 bits (119), Expect = 3e-05 Identities = 56/291 (19%), Positives = 116/291 (39%), Gaps = 11/291 (3%) Frame = +3 Query: 453 STCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAAL 620 S S+++GN+ VTE +L ++F+ E K+ R K+ +G++++ D+ A Sbjct: 108 SKTNSLFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAES 167 Query: 621 AIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDL---SSEVNDATLYACFSTYP 791 A + +GQ +K+ + +T G ++F +L + ++ + Y Y Sbjct: 168 ARKEFNYTVFFGQEVKIMPSMKNTLFRKNIG-TNVFFSNLPLENPQLTTRSFYLIMIEYG 226 Query: 792 SCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEK 971 + + R + GFV F N A I + + +I C + Sbjct: 227 NVLSCLL------ERRKNIGFVYFDNDISARNVIKKYNNQEFFGNKIICGLHFDKEVRTR 280 Query: 972 QETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHF 1151 E ++ S+ +E + + N +N T+ V NL + ++E+ +F Sbjct: 281 PEFTKRKKMI-----GSDIVIE--DELLASNNLSDNARSKTILVKNLPSDTTQEEVLDYF 333 Query: 1152 YNLGVGAIEEVRVQQEKG----FGFIRYSTHGEAALAIQMANGLVVRGKPI 1292 +G I+ V + +++ F+ Y E+ A + N + + I Sbjct: 334 ST--IGPIKSVFISEKQANTPHKAFVTYKNEEESKKAQKCLNKTIFKNHTI 382 Score = 48.9 bits (115), Expect = 7e-05 Identities = 52/218 (23%), Positives = 84/218 (38%), Gaps = 4/218 (1%) Frame = +3 Query: 657 QAIKVNWASASTQR--EDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKT 830 Q + A S Q+ TS +F+G+L S V + L F Y S A+V D T Sbjct: 89 QVFEKTVAKGSVQKYITKTSKTNSLFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLT 148 Query: 831 GRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTN 1010 +S GYG+++F+++ +AE+A E ++++ + K K + TN Sbjct: 149 KKSLGYGYLNFKDKNDAESARKEFNYTVFFGQEVKIMPSMKNTLFRKN--------IGTN 200 Query: 1011 GGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGV--GAIEEV 1184 SN +E NP TT R FY + + G + Sbjct: 201 VFFSNLPLE-------------NPQLTT----------------RSFYLIMIEYGNVLSC 231 Query: 1185 RVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKC 1298 +++ K GF+ + A I+ N G I C Sbjct: 232 LLERRKNIGFVYFDNDISARNVIKKYNNQEFFGNKIIC 269
>P29558:RBMS1_HUMAN RNA-binding motif, single-stranded-interacting protein 1 - Homo| sapiens (Human) Length = 406 Score = 50.4 bits (119), Expect = 3e-05 Identities = 36/170 (21%), Positives = 78/170 (45%), Gaps = 4/170 (2%) Frame = +3 Query: 420 SNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGF 587 S+ + G+D + ++Y+ + P+ T+ L+++ Q G + K I + ++ +GF Sbjct: 48 SSSSSNSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGF 107 Query: 588 VDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATL 767 VD+ +A A+ L + Q K Q +D + ++++ +L +++ L Sbjct: 108 VDFDSPAAAQKAVSALKASGVQAQMAK-------QQEQDPT---NLYISNLPLSMDEQEL 157 Query: 768 YACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWL 917 + R++ D+ +G SRG GF + ++ E I GK++ Sbjct: 158 ENMLKPFGQVISTRILRDS-SGTSRGVGFARMESTEKCEAVIGHFNGKFI 206 Score = 35.4 bits (80), Expect = 0.83 Identities = 20/96 (20%), Positives = 39/96 (40%) Frame = +3 Query: 672 NWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYG 851 N +S+S D ++++ L D L Y + + D T + +GYG Sbjct: 47 NSSSSSNSGWDQLSKTNLYIRGLPPHTTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYG 106 Query: 852 FVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTN 959 FV F + A+ A++ + + ++ + TN Sbjct: 107 FVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTN 142
>Q96T58:MINT_HUMAN Msx2-interacting protein - Homo sapiens (Human)| Length = 3664 Score = 50.4 bits (119), Expect = 3e-05 Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 1/171 (0%) Frame = +3 Query: 444 FDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR-KEKSSFGFVDYYDQRSAAL 620 F P R++++GN+ T + L +FQ G + + + + F+ Y D S Sbjct: 432 FHPKATRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCK 491 Query: 621 AIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCS 800 AI + G ++ +K+ + + +++ LSS V+D L F Y Sbjct: 492 AIKKMDGEYLGNNRLKLGFGKSMPTN-------CVWLDGLSSNVSDQYLTRHFCRYGPV- 543 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 953 +V++D R +G V + + A+ A+ E G+ +G +I+ ++A + Sbjct: 544 -VKVVFD----RLKGMALVLYNEIEYAQAAVKETKGRKIGGNKIKVDFANR 589
>Q923K9:ACF_RAT APOBEC1 complementation factor - Rattus norvegicus (Rat)| Length = 594 Score = 50.4 bits (119), Expect = 3e-05 Identities = 68/308 (22%), Positives = 125/308 (40%), Gaps = 18/308 (5%) Frame = +3 Query: 426 GNLPPGFD---PSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK---EKSSFGF 587 G PPG+D P +++G + ++ E+ LI + + G + +++ + F Sbjct: 41 GGPPPGWDTTPPERGCEIFIGKLPRDLFEDELIPLCEKIGKIYEMRMMMDFNGNNRGYAF 100 Query: 588 VDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVG---------DL 740 V + +++ A AI L+ I + AS R +FVG ++ Sbjct: 101 VTFSNKQEAKNAIKQLNNYEIRNGRLLGVCASVDNCR--------LFVGGIPKTKKREEI 152 Query: 741 SSEVNDATLYAC-FSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMT-GK- 911 SE+ T YPS +D KT ++RG+ FV + + + A A + G+ Sbjct: 153 LSEMKKVTEGVVDVIVYPSAAD-------KT-KNRGFAFVEYESHRAAAMARRRLLPGRI 204 Query: 912 WLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFT 1091 L I +WA +E ++DT S Sbjct: 205 QLWGHPIAVDWA-------------------------EPEVEVDEDTMSSVK-------- 231 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGL 1271 +YV NL + + + + F ++ GA+E RV++ + + F+ +S +A A++ NG Sbjct: 232 ILYVRNLMLSTSEEMIEKEFNSIKPGAVE--RVKKIRDYAFVHFSNREDAVEAMKALNGK 289 Query: 1272 VVRGKPIK 1295 V+ G PI+ Sbjct: 290 VLDGSPIE 297 Score = 44.3 bits (103), Expect = 0.002 Identities = 58/234 (24%), Positives = 94/234 (40%), Gaps = 4/234 (1%) Frame = +3 Query: 417 VSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDY 596 V N L G P T + + + VTE + ++V ++ K F FV+Y Sbjct: 133 VDNCRLFVGGIPKTKKREEILSEMKKVTEGV-VDVIVYPSAADKTK-----NRGFAFVEY 186 Query: 597 YDQRSAALA-IMTLHGR-HIYGQAIKVNWASASTQ-REDTSGHFHI-FVGDLSSEVNDAT 764 R+AA+A L GR ++G I V+WA + EDT I +V +L ++ Sbjct: 187 ESHRAAAMARRRLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEM 246 Query: 765 LYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 944 + F++ + RV + R Y FV F N+++A A+ + GK L I Sbjct: 247 IEKEFNSIKPGAVERVK------KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTL 300 Query: 945 ATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVG 1106 A + + D++ GG + E +P TT Y+G Sbjct: 301 A------KPVDKDSYVRYTRGTGGRNTMLQEYTYPLSHVYDP------TTTYLG 342
>Q5YD48:ACF_MOUSE APOBEC1 complementation factor - Mus musculus (Mouse)| Length = 595 Score = 50.4 bits (119), Expect = 3e-05 Identities = 59/243 (24%), Positives = 99/243 (40%), Gaps = 52/243 (21%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 IF+G L ++ + L + R+M D G +RGY FV+F N+QEA+ AI ++ Sbjct: 58 IFIGKLPRDLFEDELIPLCEKIGKIYEMRLMMDFN-GNNRGYAFVTFSNKQEAKNAIKQL 116 Query: 903 ------TGKWLG-------SRQIRCNWATKTNAEE-----KQETDNHNAVVL-------- 1004 TG+ LG R R EE K+ T+ V++ Sbjct: 117 NNYEIRTGRLLGVCASVDNCRLFRGGIPKTKKREEILSEMKKVTEGVVDVIVYPSAADKT 176 Query: 1005 TNGGSSNAAMEANQDTGSKE--------------------NPENNPDFTT------VYVG 1106 N G + E+++ PE D T +YV Sbjct: 177 KNRGFAFVEYESHRAAAMARRRLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVR 236 Query: 1107 NLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGK 1286 NL + + + + F ++ GA+E RV++ + + F+ +S +A A++ NG V+ G Sbjct: 237 NLMLSTSEEMIEKEFNSIKPGAVE--RVKKIRDYAFVHFSNREDAVEAMKALNGKVLDGS 294 Query: 1287 PIK 1295 PI+ Sbjct: 295 PIE 297 Score = 43.9 bits (102), Expect = 0.002 Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 6/236 (2%) Frame = +3 Query: 417 VSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDY 596 V N L G P T + + + VTE + ++V ++ K F FV+Y Sbjct: 133 VDNCRLFRGGIPKTKKREEILSEMKKVTEGV-VDVIVYPSAADKTK-----NRGFAFVEY 186 Query: 597 YDQRSAALA-IMTLHGR-HIYGQAIKVNWASASTQ-REDTSGHFHI-FVGDLSSEVNDAT 764 R+AA+A L GR ++G I V+WA + EDT I +V +L ++ Sbjct: 187 ESHRAAAMARRRLLPGRIQLWGHPIAVDWAEPEVEVDEDTMSSVKILYVRNLMLSTSEEM 246 Query: 765 LYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 944 + F++ + RV + R Y FV F N+++A A+ + GK L I Sbjct: 247 IEKEFNSIKPGAVERVK------KIRDYAFVHFSNREDAVEAMKALNGKVLDGSPIEVTL 300 Query: 945 ATKTNAEEKQETDNHNAVVLTNG-GSSNAAMEANQDTGSKENPENNP-DFTTVYVG 1106 A + D + V T G G N ++ G P ++ D TT Y+G Sbjct: 301 A--------KPVDKDSYVRYTRGTGGRNTMLQ-----GEYTYPLSHVYDPTTTYLG 343
>Q5R7X2:SR140_PONPY U2-associated protein SR140 - Pongo pygmaeus (Orangutan)| Length = 1028 Score = 50.1 bits (118), Expect = 3e-05 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 7/87 (8%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLI-------RKEKSSFGFVDYYDQ 605 DPST ++Y+GN++P + E +L + F GP+ K++ R + + GFV + ++ Sbjct: 269 DPSTT-NLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNR 327 Query: 606 RSAALAIMTLHGRHIYGQAIKVNWASA 686 R A A+ L+G+ I +K+ W A Sbjct: 328 RDAERALKNLNGKMIMSFEMKLGWGKA 354 Score = 37.7 bits (86), Expect = 0.17 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 7/84 (8%) Frame = +3 Query: 1077 NPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEV-------RVQQEKGFGFIRYSTHG 1235 +P T +Y+GN+ ++N + L + F G A ++ +E+ GF+ + Sbjct: 269 DPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRR 328 Query: 1236 EAALAIQMANGLVVRGKPIKCSWG 1307 +A A++ NG ++ +K WG Sbjct: 329 DAERALKNLNGKMIMSFEMKLGWG 352
>O15042:SR140_HUMAN U2-associated protein SR140 - Homo sapiens (Human)| Length = 1029 Score = 50.1 bits (118), Expect = 3e-05 Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 7/87 (8%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLI-------RKEKSSFGFVDYYDQ 605 DPST ++Y+GN++P + E +L + F GP+ K++ R + + GFV + ++ Sbjct: 270 DPSTT-NLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNR 328 Query: 606 RSAALAIMTLHGRHIYGQAIKVNWASA 686 R A A+ L+G+ I +K+ W A Sbjct: 329 RDAERALKNLNGKMIMSFEMKLGWGKA 355 Score = 37.7 bits (86), Expect = 0.17 Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 7/84 (8%) Frame = +3 Query: 1077 NPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEV-------RVQQEKGFGFIRYSTHG 1235 +P T +Y+GN+ ++N + L + F G A ++ +E+ GF+ + Sbjct: 270 DPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRR 329 Query: 1236 EAALAIQMANGLVVRGKPIKCSWG 1307 +A A++ NG ++ +K WG Sbjct: 330 DAERALKNLNGKMIMSFEMKLGWG 353
>Q9Y388:RBMX2_HUMAN RNA-binding motif protein, X-linked 2 - Homo sapiens (Human)| Length = 322 Score = 50.1 bits (118), Expect = 3e-05 Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 1/140 (0%) Frame = +3 Query: 654 GQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTG 833 G A KV+W S + +D++ IF+G L E+ + + FS Y + ++ D KTG Sbjct: 21 GVADKVSWHS---EYKDSAW---IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTG 74 Query: 834 RSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNA-EEKQETDNHNAVVLTN 1010 +S+G+ F+ + +Q+ A+ G + R IR + + A ++ +E D+ + Sbjct: 75 KSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKDSEEIDDVTRQLQEK 134 Query: 1011 GGSSNAAMEANQDTGSKENP 1070 G + + ++ E P Sbjct: 135 GCGARTPSPSLSESSEDEKP 154 Score = 34.7 bits (78), Expect = 1.4 Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 4/75 (5%) Frame = +3 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALA 1250 D +++G L +E+ ++ F G + + + + + KGF F+ Y LA Sbjct: 34 DSAWIFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTILA 93 Query: 1251 IQMANGLVVRGKPIK 1295 + NG+ ++G+ I+ Sbjct: 94 VDNFNGIKIKGRTIR 108
>Q3SZM1:MK67I_BOVIN MKI67 FHA domain-interacting nucleolar phosphoprotein - Bos taurus| (Bovine) Length = 296 Score = 50.1 bits (118), Expect = 3e-05 Identities = 25/83 (30%), Positives = 42/83 (50%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 I+VG L + + + A FS + + + R+ KTG S+GYGFV F ++ A+ A M Sbjct: 47 IYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGFVEFESEDVAKIAAETM 106 Query: 903 TGKWLGSRQIRCNWATKTNAEEK 971 G R ++C++ E+ Sbjct: 107 NNYLFGERLLKCHFIPPEKVHEE 129 Score = 32.7 bits (73), Expect = 5.4 Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 4/85 (4%) Frame = +3 Query: 1056 SKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGA----IEEVRVQQEKGFGFIRY 1223 +K+ + P +YVG+L + ++ +F G + KG+GF+ + Sbjct: 34 TKQQEKQKPTPGVIYVGHLPPTLYETQIRAYFSQFGTVTRFRLSRSKKTGNSKGYGFVEF 93 Query: 1224 STHGEAALAIQMANGLVVRGKPIKC 1298 + A +A + N + + +KC Sbjct: 94 ESEDVAKIAAETMNNYLFGERLLKC 118
>Q4QQT3:CELF1_RAT CUG-BP- and ETR-3-like factor 1 - Rattus norvegicus (Rat)| Length = 487 Score = 50.1 bits (118), Expect = 3e-05 Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 7/152 (4%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK------EKSSFGFVDYYDQRSAALAIM 629 ++VG V +E L E+F+ G V ++R + FV +Y +++A A Sbjct: 18 MFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77 Query: 630 TLHGRHIY-GQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDA 806 LH + G + A +++ + +F+G +S + + + FS++ + Sbjct: 78 ALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEEC 137 Query: 807 RVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 R++ G SRG FV+F + A+TAI M Sbjct: 138 RIL-RGPDGLSRGCAFVTFTTRTMAQTAIKAM 168 Score = 33.9 bits (76), Expect = 2.4 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 4/95 (4%) Frame = +3 Query: 1023 NAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE- 1199 N + Q G+ + + P+ +++ +L E +L + F G +V + ++ Sbjct: 380 NQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQT 439 Query: 1200 ---KGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 K FGF+ Y A AIQ NG + K +K Sbjct: 440 NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLK 474
>P28659:CELF1_MOUSE CUG-BP- and ETR-3-like factor 1 - Mus musculus (Mouse)| Length = 486 Score = 50.1 bits (118), Expect = 3e-05 Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 7/152 (4%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK------EKSSFGFVDYYDQRSAALAIM 629 ++VG V +E L E+F+ G V ++R + FV +Y +++A A Sbjct: 18 MFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77 Query: 630 TLHGRHIY-GQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDA 806 LH + G + A +++ + +F+G +S + + + FS++ + Sbjct: 78 ALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEEC 137 Query: 807 RVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 R++ G SRG FV+F + A+TAI M Sbjct: 138 RIL-RGPDGLSRGCAFVTFTTRTMAQTAIKAM 168 Score = 33.9 bits (76), Expect = 2.4 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 4/95 (4%) Frame = +3 Query: 1023 NAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE- 1199 N + Q G+ + + P+ +++ +L E +L + F G +V + ++ Sbjct: 379 NQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQT 438 Query: 1200 ---KGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 K FGF+ Y A AIQ NG + K +K Sbjct: 439 NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLK 473
>Q9WX37:RBPE_ANASP Putative RNA-binding protein rbpE - Anabaena sp. (strain PCC 7120)| Length = 99 Score = 49.7 bits (117), Expect = 4e-05 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 1/99 (1%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 I+VG+LS V L FS Y S + ++ D +TGR RG+GFV + + AI + Sbjct: 3 IYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQAL 62 Query: 903 TG-KWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGG 1016 G +W+G R ++ N A EEK + NGG Sbjct: 63 DGAEWMG-RVLKVNKARP--REEKGARSGGGSWSRNNGG 98 Score = 44.7 bits (104), Expect = 0.001 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 4/87 (4%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----SFGFVDYYDQRSAALAIMT 632 S+YVGN+ +VT++ L +VF G V R +L ++ FGFV+ + AI Sbjct: 2 SIYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQA 61 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSG 713 L G G+ +KVN A ++ SG Sbjct: 62 LDGAEWMGRVLKVNKARPREEKGARSG 88 Score = 37.4 bits (85), Expect = 0.22 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%) Frame = +3 Query: 1092 TVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE----KGFGFIRYSTHGEAALAIQM 1259 ++YVGNL + V +D+L + F G ++ +E +GFGF+ + AIQ Sbjct: 2 SIYVGNLSYSVTQDDLTKVFSEYGSVTRVQLPTDRETGRVRGFGFVEMESSAAEDAAIQA 61 Query: 1260 ANGLVVRGKPIK 1295 +G G+ +K Sbjct: 62 LDGAEWMGRVLK 73
>Q8R0F5:RBMX2_MOUSE RNA-binding motif protein, X-linked 2 - Mus musculus (Mouse)| Length = 326 Score = 49.7 bits (117), Expect = 4e-05 Identities = 30/108 (27%), Positives = 51/108 (47%) Frame = +3 Query: 654 GQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTG 833 G A KV+W S + IFVG L E+ + + FS Y + ++ D KTG Sbjct: 21 GVAEKVSWHS------EYKHSAWIFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTG 74 Query: 834 RSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQE 977 +S+G+ F+ + +Q+ A+ G + R IR + + A ++ E Sbjct: 75 KSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQESE 122 Score = 45.4 bits (106), Expect = 8e-04 Identities = 51/218 (23%), Positives = 94/218 (43%), Gaps = 7/218 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKS----SFGFVDYYDQRSAALAIMTL 635 ++VG + +TE +I VF G + L+R +K+ F F+ Y DQRS LA+ Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97 Query: 636 HGRHIYGQAIKVNWAS---ASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDA 806 +G I G+ I+V+ S A + ED V D++ E+ + C P S Sbjct: 98 NGIKIKGRTIRVDHVSNYRAPQESED--------VDDVTRELQEK---GCGVKTPPSSPP 146 Query: 807 RVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDN 986 V D ++ + ++++E + E T + Q C+ + T E+K E + Sbjct: 147 EVSEDEDAKLTKKHK----KDKKEKKKRKKEKTEGQAQAEQPSCS-RSATVKEKKDERAS 201 Query: 987 HNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVY 1100 + ++ + ++ SK++ +PD + Y Sbjct: 202 RK-----HSSKTSERAQKSEHRESKKSHSGSPDGRSSY 234 Score = 35.4 bits (80), Expect = 0.83 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLG----VGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 ++VG L +E+ ++ F G + + + + + KGF F+ Y LA+ Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNF 97 Query: 1263 NGLVVRGKPIK 1295 NG+ ++G+ I+ Sbjct: 98 NGIKIKGRTIR 108
>Q8CGC6:RBM28_MOUSE RNA-binding protein 28 - Mus musculus (Mouse)| Length = 750 Score = 49.7 bits (117), Expect = 4e-05 Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 25/230 (10%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYY---DQRSAALA 623 +++VG + P+ + L E+F GPV++C ++ ++ S FG+V + D + A Sbjct: 5 TLFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKE 64 Query: 624 IMTLHGRHIYGQAIKVNWASASTQREDTSG------------------HFHIFVGDLSSE 749 I T G I K + S + + + +LS + Sbjct: 65 ITTFEGCKIDVTVAKKKLRNKSKETRKNENAESPKKEPKHKKAKVADKKARLIIRNLSFK 124 Query: 750 VNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQ 929 ++ L A F+ Y + + + G+ RG+ FV F+N EA A+ K + R Sbjct: 125 CSEDDLKAVFTHYGTVLEVNIP-KKPDGKMRGFAFVQFKNLLEAGKALKGANMKEIKGRT 183 Query: 930 IRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENN 1079 + +WA A++K + H +S ++ + D KE+ + N Sbjct: 184 VAVDWAV---AKDKYKDAQH---------ASAPGVKKSSDRKPKESGKKN 221
>Q9BX46:RBM24_HUMAN RNA-binding protein 24 - Homo sapiens (Human)| Length = 236 Score = 49.7 bits (117), Expect = 4e-05 Identities = 27/67 (40%), Positives = 40/67 (59%) Frame = +3 Query: 690 TQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRN 869 T ++DT+ + IFVG L DA+L F + +A V+ D +TG+SRGYGFV+ + Sbjct: 3 TTQKDTT-YTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMAD 61 Query: 870 QQEAETA 890 + AE A Sbjct: 62 RAAAERA 68
>Q5KJL5:MRD1_CRYNE Multiple RNA-binding domain-containing protein 1 - Cryptococcus| neoformans (Filobasidiella neoformans) Length = 769 Score = 49.7 bits (117), Expect = 4e-05 Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 16/212 (7%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGR-----SRGYGFVSFRNQQEAET 887 +F+ L+ L S P S ARV R S GYGFV F+ ++ A Sbjct: 537 LFLKGLNFTTTTPHLQTVLSHIPGFSFARVQMKPDPKRPGEKLSMGYGFVGFKTKEAATK 596 Query: 888 AITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKEN 1067 A+ + G + + + +A + AE+ +ET GG + + Sbjct: 597 ALKALEGFEIDGKSLEVKFAQR-GAEDDRETKK--------GGDAEGGKTKS-------- 639 Query: 1068 PENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRV-----------QQEKGFGF 1214 T V V NL E + ++ F G ++ +R+ Q +GF F Sbjct: 640 -------TKVLVKNLPFEATKKDVRELFS--AYGQLKSLRLPRKAVPTSTGAQSTRGFAF 690 Query: 1215 IRYSTHGEAALAIQMANGLVVRGKPIKCSWGN 1310 + ++TH EAA A++ + G+ + W N Sbjct: 691 LEFTTHTEAARAMEALKHTHLLGRHLVLQWAN 722 Score = 39.3 bits (90), Expect = 0.058 Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 16/146 (10%) Frame = +3 Query: 564 KEKSSFGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWAS--ASTQREDTSG-------- 713 K +GFV + + +A A+ L G I G++++V +A A RE G Sbjct: 578 KLSMGYGFVGFKTKEAATKALKALEGFEIDGKSLEVKFAQRGAEDDRETKKGGDAEGGKT 637 Query: 714 -HFHIFVGDLSSEVNDATLYACFSTYPSCSDARV---MWDNKTGR--SRGYGFVSFRNQQ 875 + V +L E + FS Y R+ TG +RG+ F+ F Sbjct: 638 KSTKVLVKNLPFEATKKDVRELFSAYGQLKSLRLPRKAVPTSTGAQSTRGFAFLEFTTHT 697 Query: 876 EAETAITEMTGKWLGSRQIRCNWATK 953 EA A+ + L R + WA + Sbjct: 698 EAARAMEALKHTHLLGRHLVLQWANE 723
>Q92879:CELF1_HUMAN CUG-BP- and ETR-3-like factor 1 - Homo sapiens (Human)| Length = 486 Score = 49.7 bits (117), Expect = 4e-05 Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 7/152 (4%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRK------EKSSFGFVDYYDQRSAALAIM 629 ++VG V +E L E+F+ G V ++R + FV +Y +++A A Sbjct: 18 MFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQN 77 Query: 630 TLHGRHIY-GQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDA 806 LH + G + A +++ + +F+G +S + + + FS++ + Sbjct: 78 ALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEEC 137 Query: 807 RVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 R++ G SRG FV+F + A+TAI M Sbjct: 138 RIL-RGPDGLSRGCAFVTFTTRAMAQTAIKAM 168 Score = 33.9 bits (76), Expect = 2.4 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 4/95 (4%) Frame = +3 Query: 1023 NAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE- 1199 N + Q G+ + + P+ +++ +L E +L + F G +V + ++ Sbjct: 379 NQNLLTQQSIGAAGSQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQT 438 Query: 1200 ---KGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 K FGF+ Y A AIQ NG + K +K Sbjct: 439 NLSKCFGFVSYDNPVSAQAAIQSMNGFQIGMKRLK 473
>Q6NV83:SR140_MOUSE U2-associated protein SR140 - Mus musculus (Mouse)| Length = 1029 Score = 49.3 bits (116), Expect = 6e-05 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 7/87 (8%) Frame = +3 Query: 447 DPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLI-------RKEKSSFGFVDYYDQ 605 DPST ++Y+GN++P + E +L + F GP+ K++ R + + GFV + + Sbjct: 270 DPSTT-NLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMSR 328 Query: 606 RSAALAIMTLHGRHIYGQAIKVNWASA 686 R A A+ L+G+ I +K+ W A Sbjct: 329 RDAERALKNLNGKMIMSFEMKLGWGRA 355 Score = 38.1 bits (87), Expect = 0.13 Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 7/84 (8%) Frame = +3 Query: 1077 NPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEV-------RVQQEKGFGFIRYSTHG 1235 +P T +Y+GN+ ++N + L + F G A ++ +E+ GF+ + + Sbjct: 270 DPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMSRR 329 Query: 1236 EAALAIQMANGLVVRGKPIKCSWG 1307 +A A++ NG ++ +K WG Sbjct: 330 DAERALKNLNGKMIMSFEMKLGWG 353
>Q8BWL5:RBMS3_MOUSE RNA-binding motif, single-stranded-interacting protein 3 - Mus| musculus (Mouse) Length = 431 Score = 49.3 bits (116), Expect = 6e-05 Identities = 37/177 (20%), Positives = 74/177 (41%), Gaps = 4/177 (2%) Frame = +3 Query: 399 MTQMEPVSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS 578 M P +N + + + ++Y+ + P T+ LI++ Q G + K I + ++ Sbjct: 35 MAPPSPSTNSSSNSSGEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTN 94 Query: 579 ----FGFVDYYDQRSAALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSS 746 +GFVD+ +A A+ +L K N A ++ ++++ +L Sbjct: 95 QCKGYGFVDFDSPAAAQKAVASL----------KANGVQAQMAKQQEQDPTNLYISNLPI 144 Query: 747 EVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWL 917 +++ L + R++ D G SRG GF + ++ E I GK+L Sbjct: 145 SMDEQELENMLKPFGHVISTRILRD-ANGVSRGVGFARMESTEKCEVVIQHFNGKYL 200 Score = 34.3 bits (77), Expect = 1.9 Identities = 39/208 (18%), Positives = 69/208 (33%), Gaps = 5/208 (2%) Frame = +3 Query: 681 SASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVS 860 S+S + ++++ L D L Y + + D T + +GYGFV Sbjct: 44 SSSNSSGEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVD 103 Query: 861 FRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEA 1040 F + A+ A+ A + NG + A + Sbjct: 104 FDSPAAAQKAV---------------------------------ASLKANGVQAQMAKQQ 130 Query: 1041 NQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE-----KG 1205 QD T +Y+ NL ++ EL G + R+ ++ +G Sbjct: 131 EQDP------------TNLYISNLPISMDEQELENMLKPF--GHVISTRILRDANGVSRG 176 Query: 1206 FGFIRYSTHGEAALAIQMANGLVVRGKP 1289 GF R + + + IQ NG ++ P Sbjct: 177 VGFARMESTEKCEVVIQHFNGKYLKTPP 204
>Q9BDY9:RBM4_RABIT RNA-binding protein 4 - Oryctolagus cuniculus (Rabbit)| Length = 359 Score = 49.3 bits (116), Expect = 6e-05 Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 5/153 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRH 647 +++GN+ TE + +F+ G V C +I+ ++GFV D+ +A AI LH Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIK----NYGFVHIEDKTAAEDAIRNLHHYK 59 Query: 648 IYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNK 827 ++G I V AS + + T H VG++S + L A F Y + ++ D Sbjct: 60 LHGVNINVE-ASKNKSKASTKLH----VGNISPTCTNQELRAKFEEYGPVIECDIVKD-- 112 Query: 828 TGRSRGYGFVSFRNQQEAETAI-----TEMTGK 911 Y FV ++A AI TE GK Sbjct: 113 ------YAFVHMERAEDAVEAIRGLDNTEFQGK 139
>Q8C7Q4:RBM4_MOUSE RNA-binding protein 4 - Mus musculus (Mouse)| Length = 361 Score = 49.3 bits (116), Expect = 6e-05 Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 5/153 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRH 647 +++GN+ TE + +F+ G V C +I+ ++GFV D+ +A AI LH Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIK----NYGFVHIEDKTAAEDAIRNLHHYK 59 Query: 648 IYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNK 827 ++G I V AS + + T H VG++S + L A F Y + ++ D Sbjct: 60 LHGVNINVE-ASKNKSKASTKLH----VGNISPTCTNQELRAKFEEYGPVIECDIVKD-- 112 Query: 828 TGRSRGYGFVSFRNQQEAETAI-----TEMTGK 911 Y FV ++A AI TE GK Sbjct: 113 ------YAFVHMERAEDAVEAIRGLDNTEFQGK 139
>Q64LC9:RBM4B_RAT RNA-binding protein 4B - Rattus norvegicus (Rat)| Length = 357 Score = 49.3 bits (116), Expect = 6e-05 Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 5/153 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRH 647 +++GN+ TE + +F+ G V C +I+ ++GFV D+ +A AI LH Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIK----NYGFVHIEDKTAAEDAIRNLHHYK 59 Query: 648 IYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNK 827 ++G I V AS + + T H VG++S + L A F Y + ++ D Sbjct: 60 LHGVNINVE-ASKNKSKASTKLH----VGNISPTCTNQELRAKFEEYGPVIECDIVKD-- 112 Query: 828 TGRSRGYGFVSFRNQQEAETAI-----TEMTGK 911 Y FV ++A AI TE GK Sbjct: 113 ------YAFVHMERAEDAVEAIRGLDNTEFQGK 139
>Q06AT9:RBM4B_PIG RNA-binding protein 4B - Sus scrofa (Pig)| Length = 359 Score = 49.3 bits (116), Expect = 6e-05 Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 5/153 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRH 647 +++GN+ TE + +F+ G V C +I+ ++GFV D+ +A AI LH Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIK----NYGFVHIEDKTAAEDAIRNLHHYK 59 Query: 648 IYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNK 827 ++G I V AS + + T H VG++S + L A F Y + ++ D Sbjct: 60 LHGVNINVE-ASKNKSKASTKLH----VGNISPTCTNQELRAKFEEYGPVIECDIVKD-- 112 Query: 828 TGRSRGYGFVSFRNQQEAETAI-----TEMTGK 911 Y FV ++A AI TE GK Sbjct: 113 ------YAFVHMERAEDAVEAIRGLDNTEFQGK 139
>Q8VE92:RBM4B_MOUSE RNA-binding protein 4B - Mus musculus (Mouse)| Length = 357 Score = 49.3 bits (116), Expect = 6e-05 Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 5/153 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRH 647 +++GN+ TE + +F+ G V C +I+ ++GFV D+ +A AI LH Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIK----NYGFVHIEDKTAAEDAIRNLHHYK 59 Query: 648 IYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNK 827 ++G I V AS + + T H VG++S + L A F Y + ++ D Sbjct: 60 LHGVNINVE-ASKNKSKASTKLH----VGNISPTCTNQELRAKFEEYGPVIECDIVKD-- 112 Query: 828 TGRSRGYGFVSFRNQQEAETAI-----TEMTGK 911 Y FV ++A AI TE GK Sbjct: 113 ------YAFVHMERAEDAVEAIRGLDNTEFQGK 139
>Q9BQ04:RBM4B_HUMAN RNA-binding protein 4B - Homo sapiens (Human)| Length = 359 Score = 49.3 bits (116), Expect = 6e-05 Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 5/153 (3%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRH 647 +++GN+ TE + +F+ G V C +I+ ++GFV D+ +A AI LH Sbjct: 4 LFIGNLPREATEQEIRSLFEQYGKVLECDIIK----NYGFVHIEDKTAAEDAIRNLHHYK 59 Query: 648 IYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNK 827 ++G I V AS + + T H VG++S + L A F Y + ++ D Sbjct: 60 LHGVNINVE-ASKNKSKASTKLH----VGNISPTCTNQELRAKFEEYGPVIECDIVKD-- 112 Query: 828 TGRSRGYGFVSFRNQQEAETAI-----TEMTGK 911 Y FV ++A AI TE GK Sbjct: 113 ------YAFVHMERAEDAVEAIRGLDNTEFQGK 139
>P42696:RBM34_HUMAN RNA-binding protein 34 - Homo sapiens (Human)| Length = 430 Score = 49.3 bits (116), Expect = 6e-05 Identities = 46/198 (23%), Positives = 85/198 (42%), Gaps = 21/198 (10%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKL--------------------IRKEKSSF 581 R+V+VGN+ + L F+ G +E + I ++ + Sbjct: 185 RTVFVGNLPVTCNKKKLKSFFKEYGQIESVRFRSLIPAEGTLSKKLAAIKRKIHPDQKNI 244 Query: 582 GFVDYYDQRSAALAIMTLHGRHIY-GQAIKVNWASASTQREDTSGHFHIFVGDLSSEVND 758 + + SAA + +G I G I+V+ AS ++ R+ S +FVG+L +V + Sbjct: 245 NAYVVFKEESAATQALKRNGAQIADGFRIRVDLASETSSRDKRS----VFVGNLPYKVEE 300 Query: 759 ATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRC 938 + + F S R++ D TG +G+G+V F N A+ ++ L R++R Sbjct: 301 SAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVHLAL-KLNNSELMGRKLR- 358 Query: 939 NWATKTNAEEKQETDNHN 992 ++ +EK + N N Sbjct: 359 --VMRSVNKEKFKQQNSN 374 Score = 38.1 bits (87), Expect = 0.13 Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 6/67 (8%) Frame = +3 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE------KGFGFIRYSTHGEAA 1244 D +V+VGNL ++V + +HF L G+I VR+ ++ KGFG++ + Sbjct: 285 DKRSVFVGNLPYKVEESAIEKHF--LDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVH 342 Query: 1245 LAIQMAN 1265 LA+++ N Sbjct: 343 LALKLNN 349
>Q4PC17:MRD1_USTMA Multiple RNA-binding domain-containing protein 1 - Ustilago maydis| (Smut fungus) Length = 858 Score = 49.3 bits (116), Expect = 6e-05 Identities = 51/206 (24%), Positives = 85/206 (41%), Gaps = 10/206 (4%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGR-----SRGYGFVSFRNQQEAET 887 ++V +LS D L A F + AR+ R S GYGFV F++ A T Sbjct: 623 LYVKNLSFSTTDERLTAFFHGLSDFAFARIQTKPDPRRPGARLSMGYGFVGFKSIDAART 682 Query: 888 AITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKEN 1067 A M GK L + + +A + NAE + +++GGS Sbjct: 683 AQKAMDGKVLDAHTLVVTFA-RRNAEA-------STTSISSGGS---------------- 718 Query: 1068 PENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE-----KGFGFIRYSTH 1232 T + + NL E + ++ F + G ++ VR+ ++ +GFGF+ YST Sbjct: 719 -------TKILIKNLPFEATKRDIRDLFSS--QGQLKSVRLPKKFDNTTRGFGFVEYSTV 769 Query: 1233 GEAALAIQMANGLVVRGKPIKCSWGN 1310 EA A++ + G+ + W + Sbjct: 770 REAQSAMEALKHTHLLGRHLVLQWSH 795 Score = 44.7 bits (104), Expect = 0.001 Identities = 41/185 (22%), Positives = 76/185 (41%), Gaps = 15/185 (8%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKE---------KSSFGFVDYYDQRSAA 617 ++YV N+ + T+ L F G ++ K +GFV + +A Sbjct: 622 TLYVKNLSFSTTDERLTAFFHGLSDFAFARIQTKPDPRRPGARLSMGYGFVGFKSIDAAR 681 Query: 618 LAIMTLHGRHIYGQAIKVNWA----SASTQREDTSGHFHIFVGDLSSEVNDATLYACFST 785 A + G+ + + V +A AST + G I + +L E + FS+ Sbjct: 682 TAQKAMDGKVLDAHTLVVTFARRNAEASTTSISSGGSTKILIKNLPFEATKRDIRDLFSS 741 Query: 786 YPSCSDARV--MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTN 959 R+ +DN T RG+GFV + +EA++A+ + L R + W+ + Sbjct: 742 QGQLKSVRLPKKFDNTT---RGFGFVEYSTVREAQSAMEALKHTHLLGRHLVLQWSHLAS 798 Query: 960 AEEKQ 974 + ++Q Sbjct: 799 STQQQ 803 Score = 42.0 bits (97), Expect = 0.009 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 6/125 (4%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 + V L S + DA L FS + +D ++M G SR +GFV +R++QEA+ A+ Sbjct: 4 LIVRGLPSYLTDARLREHFSQKGAVTDVKLM-RRPDGTSRKFGFVGYRSEQEAQQALDYF 62 Query: 903 TGKWLGSRQIRCNWATKTNAEE-----KQETDNHNAVVLTNGGSSNA-AMEANQDTGSKE 1064 ++ + +I A K EE ++ + NA G +S + A + D + Sbjct: 63 NRTFIDTSRISIELAKKIGDEELVHQREERRNRRNAGAGPEGSASTSDARKRKADKSDTQ 122 Query: 1065 NPENN 1079 E + Sbjct: 123 QEEGS 127
>P51989:RO21_XENLA Heterogeneous nuclear ribonucleoprotein A2 homolog 1 - Xenopus| laevis (African clawed frog) Length = 346 Score = 48.9 bits (115), Expect = 7e-05 Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 7/153 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR----KEKSSFGFVDYYDQRSAALAIM 629 R +++G + TE L ++ G + C ++R K FGFV + A+ Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMA 68 Query: 630 TLHGRHIYGQAIKVNWASASTQREDTSGHFHI---FVGDLSSEVNDATLYACFSTYPSCS 800 T I G+ ++ A A + H + FVG + + + L F Y Sbjct: 69 T-RPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKID 127 Query: 801 DARVMWDNKTGRSRGYGFVSFRNQQEAETAITE 899 ++ D ++G+ RG+ FV+F + + + + Sbjct: 128 SIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQ 160
>Q2T9U5:REXON_BOVIN Putative RNA exonuclease NEF-sp - Bos taurus (Bovine)| Length = 783 Score = 48.9 bits (115), Expect = 7e-05 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 10/159 (6%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGR 644 +VY G + N + L +F+ GPV+ L+ + + Y +A LAI +L G Sbjct: 504 TVYAGPFNKNCNLSALKRLFKSFGPVQLMTLVLETHQPHLCIQYEVLEAAQLAIESLDGV 563 Query: 645 HIYGQAIKVNW----------ASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPS 794 + G IKV + +D+ I++ +S + L C S + Sbjct: 564 LVEGSCIKVQRPVTELTLDCDTLVNELEQDSENRGTIYLSGVSETFKEHLLQHC-SIFLG 622 Query: 795 CSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGK 911 + D K+G+ +GY F+ F+ A+ A+ +TGK Sbjct: 623 LEAMILPKDLKSGKQKGYCFLRFKTFGSAQRALNILTGK 661 Score = 32.0 bits (71), Expect = 9.2 Identities = 20/71 (28%), Positives = 33/71 (46%) Frame = +3 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMA 1262 + +TVY G N L R F + G + + ++ + I+Y A LAI+ Sbjct: 501 EMSTVYAGPFNKNCNLSALKRLFKSFGPVQLMTLVLETHQPHLCIQYEVLEAAQLAIESL 560 Query: 1263 NGLVVRGKPIK 1295 +G++V G IK Sbjct: 561 DGVLVEGSCIK 571
>Q6P8A7:RBM24_XENTR RNA-binding protein 24 - Xenopus tropicalis (Western clawed frog)| (Silurana tropicalis) Length = 226 Score = 48.5 bits (114), Expect = 1e-04 Identities = 26/67 (38%), Positives = 40/67 (59%) Frame = +3 Query: 690 TQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRN 869 T ++DT+ + IFVG L D++L F + +A V+ D +TG+SRGYGFV+ + Sbjct: 3 TTQKDTT-YTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMAD 61 Query: 870 QQEAETA 890 + AE A Sbjct: 62 RAAAERA 68
>Q5ZMA3:RBM24_CHICK RNA-binding protein 24 - Gallus gallus (Chicken)| Length = 225 Score = 48.5 bits (114), Expect = 1e-04 Identities = 26/67 (38%), Positives = 40/67 (59%) Frame = +3 Query: 690 TQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRN 869 T ++DT+ + IFVG L D++L F + +A V+ D +TG+SRGYGFV+ + Sbjct: 3 TTQKDTT-YTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMAD 61 Query: 870 QQEAETA 890 + AE A Sbjct: 62 RAAAERA 68
>Q8C2Q3:RBM14_MOUSE RNA-binding protein 14 - Mus musculus (Mouse)| Length = 669 Score = 48.5 bits (114), Expect = 1e-04 Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 2/164 (1%) Frame = +3 Query: 468 VYVGNVH-PNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGR 644 ++VGNV + T L +F G V C ++++ F FV + A AI LHG Sbjct: 3 IFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ----FAFVHMRENAGAVRAIEALHGH 58 Query: 645 HIY-GQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWD 821 + G+A+ V + R + IFVG++S+ L + F + V+ D Sbjct: 59 ELRPGRALVVEMS-----RPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD 113 Query: 822 NKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 953 Y FV + +A+ AI ++ GK + ++I +TK Sbjct: 114 --------YAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTK 149
>Q5EA36:RBM14_BOVIN RNA-binding protein 14 - Bos taurus (Bovine)| Length = 669 Score = 48.5 bits (114), Expect = 1e-04 Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 2/164 (1%) Frame = +3 Query: 468 VYVGNVH-PNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGR 644 ++VGNV + T L +F G V C ++++ F FV + A AI LHG Sbjct: 3 IFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQ----FAFVHMRENAGAVRAIEALHGH 58 Query: 645 HIY-GQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWD 821 + G+A+ V + R + IFVG++S+ L + F + V+ D Sbjct: 59 ELRPGRALVVEMS-----RPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKD 113 Query: 822 NKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK 953 Y FV + +A+ AI ++ GK + ++I +TK Sbjct: 114 --------YAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTK 149
>Q9I8B3:RB24B_XENLA RNA-binding protein 24-B - Xenopus laevis (African clawed frog)| Length = 224 Score = 48.5 bits (114), Expect = 1e-04 Identities = 26/67 (38%), Positives = 40/67 (59%) Frame = +3 Query: 690 TQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRN 869 T ++DT+ + IFVG L D++L F + +A V+ D +TG+SRGYGFV+ + Sbjct: 3 TTQKDTT-YTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMAD 61 Query: 870 QQEAETA 890 + AE A Sbjct: 62 RAAAERA 68
>Q6GQD3:RB24A_XENLA RNA-binding protein 24-A - Xenopus laevis (African clawed frog)| Length = 225 Score = 48.5 bits (114), Expect = 1e-04 Identities = 26/67 (38%), Positives = 40/67 (59%) Frame = +3 Query: 690 TQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRN 869 T ++DT+ + IFVG L D++L F + +A V+ D +TG+SRGYGFV+ + Sbjct: 3 TTQKDTT-YTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMAD 61 Query: 870 QQEAETA 890 + AE A Sbjct: 62 RAAAERA 68
>Q94901:LARK_DROME RNA-binding protein lark - Drosophila melanogaster (Fruit fly)| Length = 352 Score = 48.5 bits (114), Expect = 1e-04 Identities = 44/196 (22%), Positives = 68/196 (34%) Frame = +3 Query: 708 SGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAET 887 +G F +F+G+L + L A F Y + + V+ + YGFV +Q+ Sbjct: 4 AGTFKLFIGNLDEKTQATELRALFEKYGTVVECDVV--------KNYGFVHMETEQQGRD 55 Query: 888 AITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKEN 1067 AI + G L I+ A A Sbjct: 56 AIQNLNGYTLNEFAIKVEAAKSRRAP---------------------------------- 81 Query: 1068 PENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAAL 1247 N T ++VGNL + E+ F G V + +GF+ G+ Sbjct: 82 ---NTPTTKIFVGNLTDKTRAPEVRELFQKYGT----VVECDIVRNYGFVHLDCVGDVQD 134 Query: 1248 AIQMANGLVVRGKPIK 1295 AI+ NG VV G+P+K Sbjct: 135 AIKELNGRVVDGQPLK 150 Score = 48.5 bits (114), Expect = 1e-04 Identities = 37/161 (22%), Positives = 73/161 (45%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRH 647 +++GN+ L +F+ G V C +++ ++GFV ++ AI L+G Sbjct: 9 LFIGNLDEKTQATELRALFEKYGTVVECDVVK----NYGFVHMETEQQGRDAIQNLNGYT 64 Query: 648 IYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNK 827 + AIKV +A ++R + IFVG+L+ + + F Y + + ++ Sbjct: 65 LNEFAIKVE--AAKSRRAPNTPTTKIFVGNLTDKTRAPEVRELFQKYGTVVECDIV---- 118 Query: 828 TGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWAT 950 R YGFV + + AI E+ G+ + + ++ +T Sbjct: 119 ----RNYGFVHLDCVGDVQDAIKELNGRVVDGQPLKVQVST 155 Score = 34.7 bits (78), Expect = 1.4 Identities = 23/82 (28%), Positives = 40/82 (48%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRH 647 ++VGN+ + E+FQ G V C ++R ++GFV AI L+GR Sbjct: 88 IFVGNLTDKTRAPEVRELFQKYGTVVECDIVR----NYGFVHLDCVGDVQDAIKELNGRV 143 Query: 648 IYGQAIKVNWASASTQREDTSG 713 + GQ +KV +++ + + G Sbjct: 144 VDGQPLKVQVSTSRVRPKPGMG 165
>A0JM51:CELF5_XENTR CUG-BP- and ETR-3-like factor 5 - Xenopus tropicalis (Western| clawed frog) (Silurana tropicalis) Length = 486 Score = 48.5 bits (114), Expect = 1e-04 Identities = 27/81 (33%), Positives = 43/81 (53%) Frame = +3 Query: 693 QREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQ 872 QRE G ++F+ L E D L F + + ++V D T +S+ +GFVSF N Sbjct: 394 QREGPEG-CNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSKCFGFVSFDNP 452 Query: 873 QEAETAITEMTGKWLGSRQIR 935 A+TAI M G +G ++++ Sbjct: 453 SSAQTAIQAMNGFQIGMKRLK 473 Score = 38.1 bits (87), Expect = 0.13 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 11/115 (9%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR-KEKSSFG--FVDYYDQRSAALAIMT 632 R ++VG + +E + +FQ G +E C ++R + SS G FV + A AI Sbjct: 135 RKLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQAAIQA 194 Query: 633 LHGRHIY---GQAIKVNWASASTQR-----EDTSGHFHIFVGDLSSEVNDATLYA 773 LHG ++ V +A +R + G IF L+ ++ + YA Sbjct: 195 LHGSQTMPGASSSLVVKFADTDKERTLRRMQQMVGQLGIFTPSLALPISPYSAYA 249 Score = 36.2 bits (82), Expect = 0.49 Identities = 41/187 (21%), Positives = 71/187 (37%), Gaps = 5/187 (2%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG + + + L F + + V+ D TG +G F+++ + A A T + Sbjct: 49 LFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMHKGCAFLTYCARDSAIKAQTAL 108 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNP 1082 E+K T G + D+ S+ Sbjct: 109 H-------------------EQK-----------TLPGMARPIQVKPADSESRGGDRK-- 136 Query: 1083 DFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQ-----EKGFGFIRYSTHGEAAL 1247 ++VG L + + +E+ F G+IEE V + KG F+++S+H EA Sbjct: 137 ----LFVGMLSKQQSEEEVTSMFQ--AFGSIEECSVLRGPDGSSKGCAFVKFSSHAEAQA 190 Query: 1248 AIQMANG 1268 AIQ +G Sbjct: 191 AIQALHG 197
>Q24207:BOULE_DROME Protein boule - Drosophila melanogaster (Fruit fly)| Length = 228 Score = 48.5 bits (114), Expect = 1e-04 Identities = 31/97 (31%), Positives = 52/97 (53%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 IFVG +S + +A L FS Y + +++ D + G S+GYGFV+F +QEA+ + Sbjct: 35 IFVGGISGDTTEADLTRVFSAYGTVKSTKIIVD-RAGVSKGYGFVTFETEQEAQR--LQA 91 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNG 1013 G+ + R + N A K++ + ++V TNG Sbjct: 92 DGECVVLRDRKLNIAPAI----KKQPNPLQSIVATNG 124
>P78814:SRP2_SCHPO Pre-mRNA-splicing factor srp2 - Schizosaccharomyces pombe (Fission| yeast) Length = 365 Score = 48.1 bits (113), Expect = 1e-04 Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 15/163 (9%) Frame = +3 Query: 468 VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSAALAIMTLHGRH 647 ++VG + P T +++ F+G G + CKL+ + FGFV+ D R A + G+ Sbjct: 6 LFVGRIPPQATREDMMDFFKGYGQILDCKLM----NGFGFVEVEDARDARDIVNDFQGKE 61 Query: 648 IYGQAIKVNWASASTQREDTSGH-------------FHIFVGDLSSEVNDATLYACF--S 782 G I V A +R + F + V +LS +V+ L + Sbjct: 62 FMGSRIVVEPARGERRRRENFRESAASKYPRPRRTGFRLIVENLSEDVSWQDLKDVMRKA 121 Query: 783 TYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGK 911 P+ +DA + G G V F +++ A+T + G+ Sbjct: 122 GEPTFTDAH-------RENPGAGVVEFSTEEDMRNALTSLNGE 157
>Q5RBD3:RBMS3_PONPY RNA-binding motif, single-stranded-interacting protein 3 - Pongo| pygmaeus (Orangutan) Length = 436 Score = 48.1 bits (113), Expect = 1e-04 Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 4/155 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMT 632 ++Y+ + P T+ LI++ Q G + K I + ++ +GFVD+ +A A+ + Sbjct: 61 NLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVAS 120 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 L K N A ++ ++++ +L +++ L + R+ Sbjct: 121 L----------KANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRI 170 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWL 917 + D G SRG GF + ++ E I GK+L Sbjct: 171 LRD-ANGVSRGVGFARMESTEKCEVVIQHFNGKYL 204 Score = 33.9 bits (76), Expect = 2.4 Identities = 40/213 (18%), Positives = 73/213 (34%), Gaps = 9/213 (4%) Frame = +3 Query: 678 ASASTQREDTSGH----FHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRG 845 +S++ ++SG ++++ L D L Y + + D T + +G Sbjct: 43 SSSNNSSNNSSGEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKG 102 Query: 846 YGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSN 1025 YGFV F + A+ A+ A + NG + Sbjct: 103 YGFVDFDSPAAAQKAV---------------------------------ASLKANGVQAQ 129 Query: 1026 AAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE-- 1199 A + QD T +Y+ NL ++ EL G + R+ ++ Sbjct: 130 MAKQQEQDP------------TNLYISNLPISMDEQELENMLKPF--GHVISTRILRDAN 175 Query: 1200 ---KGFGFIRYSTHGEAALAIQMANGLVVRGKP 1289 +G GF R + + + IQ NG ++ P Sbjct: 176 GVSRGVGFARMESTEKCEVVIQHFNGKYLKTPP 208
>Q6XE24:RBMS3_HUMAN RNA-binding motif, single-stranded-interacting protein 3 - Homo| sapiens (Human) Length = 437 Score = 48.1 bits (113), Expect = 1e-04 Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 4/155 (2%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSS----FGFVDYYDQRSAALAIMT 632 ++Y+ + P T+ LI++ Q G + K I + ++ +GFVD+ +A A+ + Sbjct: 62 NLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKGYGFVDFDSPAAAQKAVAS 121 Query: 633 LHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARV 812 L K N A ++ ++++ +L +++ L + R+ Sbjct: 122 L----------KANGVQAQMAKQQEQDPTNLYISNLPISMDEQELENMLKPFGHVISTRI 171 Query: 813 MWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWL 917 + D G SRG GF + ++ E I GK+L Sbjct: 172 LRD-ANGVSRGVGFARMESTEKCEVVIQHFNGKYL 205 Score = 33.9 bits (76), Expect = 2.4 Identities = 40/213 (18%), Positives = 73/213 (34%), Gaps = 9/213 (4%) Frame = +3 Query: 678 ASASTQREDTSGH----FHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRG 845 +S++ ++SG ++++ L D L Y + + D T + +G Sbjct: 44 SSSNNSSNNSSGEQLSKTNLYIRGLPPGTTDQDLIKLCQPYGKIVSTKAILDKNTNQCKG 103 Query: 846 YGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSN 1025 YGFV F + A+ A+ A + NG + Sbjct: 104 YGFVDFDSPAAAQKAV---------------------------------ASLKANGVQAQ 130 Query: 1026 AAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQE-- 1199 A + QD T +Y+ NL ++ EL G + R+ ++ Sbjct: 131 MAKQQEQDP------------TNLYISNLPISMDEQELENMLKPF--GHVISTRILRDAN 176 Query: 1200 ---KGFGFIRYSTHGEAALAIQMANGLVVRGKP 1289 +G GF R + + + IQ NG ++ P Sbjct: 177 GVSRGVGFARMESTEKCEVVIQHFNGKYLKTPP 209
>Q5FVM4:NONO_RAT Non-POU domain-containing octamer-binding protein - Rattus| norvegicus (Rat) Length = 476 Score = 48.1 bits (113), Expect = 1e-04 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 1/153 (0%) Frame = +3 Query: 438 PGFDPSTCRS-VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSA 614 PG T RS ++VGN+ P++TE + ++F+ G I K+K FGF+ + A Sbjct: 70 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV-FIHKDK-GFGFIRLETRTLA 127 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPS 794 +A + L + G+ ++V +A S + V +L V++ L FS + Sbjct: 128 EIAKVELDNMPLRGKQLRVRFACHSAS---------LTVRNLPQYVSNELLEEAFSVFGQ 178 Query: 795 CSDARVMWDNKTGRSRGYGFVSFRNQQEAETAI 893 A V+ D++ GR G G V F + A A+ Sbjct: 179 VERAVVIVDDR-GRPSGKGIVEFSGKPAARKAL 210 Score = 43.1 bits (100), Expect = 0.004 Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 3/114 (2%) Frame = +3 Query: 963 EEKQETDNHNAVVLTNG---GSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRD 1133 +++Q+ + NG S N + + K + + ++VGNL ++ + Sbjct: 34 QQQQQQQQPPPPIPANGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEE 93 Query: 1134 ELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 E+ + F G EV + ++KGFGFIR T A +A + + +RGK ++ Sbjct: 94 EMRKLFEKYGKAG--EVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLR 145 Score = 32.3 bits (72), Expect = 7.1 Identities = 18/75 (24%), Positives = 34/75 (45%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG+L ++ + + F Y + + D +G+GF+ + AE A E+ Sbjct: 81 LFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVEL 134 Query: 903 TGKWLGSRQIRCNWA 947 L +Q+R +A Sbjct: 135 DNMPLRGKQLRVRFA 149
>Q5RFL9:NONO_PONPY Non-POU domain-containing octamer-binding protein - Pongo pygmaeus| (Orangutan) Length = 471 Score = 48.1 bits (113), Expect = 1e-04 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 1/153 (0%) Frame = +3 Query: 438 PGFDPSTCRS-VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSA 614 PG T RS ++VGN+ P++TE + ++F+ G I K+K FGF+ + A Sbjct: 65 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV-FIHKDK-GFGFIRLETRTLA 122 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPS 794 +A + L + G+ ++V +A S + V +L V++ L FS + Sbjct: 123 EIAKVELDNMPLRGKQLRVRFACHSAS---------LTVRNLPQYVSNELLEEAFSVFGQ 173 Query: 795 CSDARVMWDNKTGRSRGYGFVSFRNQQEAETAI 893 A V+ D++ GR G G V F + A A+ Sbjct: 174 VERAVVIVDDR-GRPSGKGIVEFSGKPAARKAL 205 Score = 42.4 bits (98), Expect = 0.007 Identities = 22/67 (32%), Positives = 38/67 (56%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLV 1274 ++VGNL ++ +E+ + F G EV + ++KGFGFIR T A +A + + Sbjct: 76 LFVGNLPPDITEEEMRKLFEKYGKAG--EVFIHKDKGFGFIRLETRTLAEIAKVELDNMP 133 Query: 1275 VRGKPIK 1295 +RGK ++ Sbjct: 134 LRGKQLR 140 Score = 32.3 bits (72), Expect = 7.1 Identities = 18/75 (24%), Positives = 34/75 (45%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG+L ++ + + F Y + + D +G+GF+ + AE A E+ Sbjct: 76 LFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVEL 129 Query: 903 TGKWLGSRQIRCNWA 947 L +Q+R +A Sbjct: 130 DNMPLRGKQLRVRFA 144
>Q99K48:NONO_MOUSE Non-POU domain-containing octamer-binding protein - Mus musculus| (Mouse) Length = 473 Score = 48.1 bits (113), Expect = 1e-04 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 1/153 (0%) Frame = +3 Query: 438 PGFDPSTCRS-VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSA 614 PG T RS ++VGN+ P++TE + ++F+ G I K+K FGF+ + A Sbjct: 67 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV-FIHKDK-GFGFIRLETRTLA 124 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPS 794 +A + L + G+ ++V +A S + V +L V++ L FS + Sbjct: 125 EIAKVELDNMPLRGKQLRVRFACHSAS---------LTVRNLPQYVSNELLEEAFSVFGQ 175 Query: 795 CSDARVMWDNKTGRSRGYGFVSFRNQQEAETAI 893 A V+ D++ GR G G V F + A A+ Sbjct: 176 VERAVVIVDDR-GRPSGKGIVEFSGKPAARKAL 207 Score = 43.1 bits (100), Expect = 0.004 Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 3/114 (2%) Frame = +3 Query: 963 EEKQETDNHNAVVLTNG---GSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGHEVNRD 1133 +++Q+ + NG S N + + K + + ++VGNL ++ + Sbjct: 31 QQQQQQQQPPPPIPANGQQASSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEE 90 Query: 1134 ELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIK 1295 E+ + F G EV + ++KGFGFIR T A +A + + +RGK ++ Sbjct: 91 EMRKLFEKYGKAG--EVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLR 142 Score = 32.3 bits (72), Expect = 7.1 Identities = 18/75 (24%), Positives = 34/75 (45%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG+L ++ + + F Y + + D +G+GF+ + AE A E+ Sbjct: 78 LFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVEL 131 Query: 903 TGKWLGSRQIRCNWA 947 L +Q+R +A Sbjct: 132 DNMPLRGKQLRVRFA 146
>Q15233:NONO_HUMAN Non-POU domain-containing octamer-binding protein - Homo sapiens| (Human) Length = 471 Score = 48.1 bits (113), Expect = 1e-04 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 1/153 (0%) Frame = +3 Query: 438 PGFDPSTCRS-VYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFGFVDYYDQRSA 614 PG T RS ++VGN+ P++TE + ++F+ G I K+K FGF+ + A Sbjct: 65 PGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEV-FIHKDK-GFGFIRLETRTLA 122 Query: 615 ALAIMTLHGRHIYGQAIKVNWASASTQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPS 794 +A + L + G+ ++V +A S + V +L V++ L FS + Sbjct: 123 EIAKVELDNMPLRGKQLRVRFACHSAS---------LTVRNLPQYVSNELLEEAFSVFGQ 173 Query: 795 CSDARVMWDNKTGRSRGYGFVSFRNQQEAETAI 893 A V+ D++ GR G G V F + A A+ Sbjct: 174 VERAVVIVDDR-GRPSGKGIVEFSGKPAARKAL 205 Score = 42.4 bits (98), Expect = 0.007 Identities = 22/67 (32%), Positives = 38/67 (56%) Frame = +3 Query: 1095 VYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLV 1274 ++VGNL ++ +E+ + F G EV + ++KGFGFIR T A +A + + Sbjct: 76 LFVGNLPPDITEEEMRKLFEKYGKAG--EVFIHKDKGFGFIRLETRTLAEIAKVELDNMP 133 Query: 1275 VRGKPIK 1295 +RGK ++ Sbjct: 134 LRGKQLR 140 Score = 32.3 bits (72), Expect = 7.1 Identities = 18/75 (24%), Positives = 34/75 (45%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FVG+L ++ + + F Y + + D +G+GF+ + AE A E+ Sbjct: 76 LFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKD------KGFGFIRLETRTLAEIAKVEL 129 Query: 903 TGKWLGSRQIRCNWA 947 L +Q+R +A Sbjct: 130 DNMPLRGKQLRVRFA 144
>Q6FXP4:MRD1_CANGA Multiple RNA-binding domain-containing protein 1 - Candida glabrata| (Yeast) (Torulopsis glabrata) Length = 861 Score = 48.1 bits (113), Expect = 1e-04 Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 26/221 (11%) Frame = +3 Query: 465 SVYVGNVHPNVTENLLIE---VFQGSGPVE-RCKLIRKEKSS-----FGFVDYYDQRSAA 617 S+++ N++ T L + VF G + + K K+K+ FGFV++ + A Sbjct: 641 SIFIKNLNFKTTSQQLTDRFKVFSGFVVAQVKTKPDPKQKNKVLSMGFGFVEFRTKEQAT 700 Query: 618 LAIMTLHGRHIYGQAIKVNWA----SASTQREDTSGHFHIFVGDLSSEVNDATLYACFST 785 I + G I G I++ + +A +Q + + + I V +L E ++ F++ Sbjct: 701 AVISAMDGTVIDGHKIQLKLSHRQGNAGSQEKKKAKNGKIIVKNLPFEATRKDVFELFNS 760 Query: 786 YPSCSDARVMWDNKTGRS-RGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATK--T 956 + RV K +S RG+ FV F +EAE A+ ++ G L R++ A + Sbjct: 761 FGQLKSVRV--PKKFDKSARGFAFVEFVLPKEAENAMDQLQGVHLLGRRLVMQPAEQEAA 818 Query: 957 NAEE----------KQETDNHNAVVLTNGGSSNAAMEANQD 1049 NAEE KQ + A + N G ME ++ Sbjct: 819 NAEEELERMTKKVRKQAAVSEIAAMTRNAGKRKLDMEDEEE 859 Score = 33.9 bits (76), Expect = 2.4 Identities = 20/72 (27%), Positives = 30/72 (41%) Frame = +3 Query: 777 FSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKT 956 FS Y + V D +TG S+G+ +V F +EA A E+ + R + A + Sbjct: 345 FSPYGELKEVHVAVDTRTGNSKGFAYVLFAKPEEAVQAYIELDKQIFQGRLLHILAADEM 404 Query: 957 NAEEKQETDNHN 992 E D N Sbjct: 405 KDHRLDEFDLKN 416 Score = 33.5 bits (75), Expect = 3.2 Identities = 14/50 (28%), Positives = 31/50 (62%) Frame = +3 Query: 798 SDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWA 947 +D R++ N+ G+SR + F+ ++N+Q+A A+ G ++ + +I + A Sbjct: 40 TDLRIL-KNREGKSRRFAFIGYKNEQDALDAVNYFDGSFIYTSKIEVDMA 88
>Q9IBD1:CELF3_DANRE CUG-BP- and ETR-3-like factor 3 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 452 Score = 48.1 bits (113), Expect = 1e-04 Identities = 27/81 (33%), Positives = 43/81 (53%) Frame = +3 Query: 693 QREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQ 872 QRE G +IF+ L E D+ + F + + A+V D T +S+ +GFVSF N Sbjct: 360 QREGPEG-CNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNP 418 Query: 873 QEAETAITEMTGKWLGSRQIR 935 A+ AI M G +G ++++ Sbjct: 419 ASAQAAIQAMNGFQIGMKRLK 439 Score = 32.7 bits (73), Expect = 5.4 Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 4/84 (4%) Frame = +3 Query: 462 RSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIR-KEKSSFG--FVDYYDQRSAALAIMT 632 R ++VG + +++ + ++F+ G +E C ++R + +S G FV Y A AI Sbjct: 94 RKLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGPDGASKGCAFVKYQSNAEAQAAISA 153 Query: 633 LHG-RHIYGQAIKVNWASASTQRE 701 LHG R + G + + A T++E Sbjct: 154 LHGSRTLPGASSSLVVKFADTEKE 177
>Q7ZWM3:CEL3B_XENLA CUG-BP- and ETR-3-like factor 3-B - Xenopus laevis (African clawed| frog) Length = 462 Score = 48.1 bits (113), Expect = 1e-04 Identities = 27/81 (33%), Positives = 43/81 (53%) Frame = +3 Query: 693 QREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQ 872 QRE G +IF+ L E D+ + F + + A+V D T +S+ +GFVSF N Sbjct: 370 QREGPEG-CNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNP 428 Query: 873 QEAETAITEMTGKWLGSRQIR 935 A+ AI M G +G ++++ Sbjct: 429 GSAQAAIQSMNGFQIGMKRLK 449 Score = 34.7 bits (78), Expect = 1.4 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 4/88 (4%) Frame = +3 Query: 1044 QDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQ----QEKGFG 1211 Q ++ P+ +++ +L E E+ + F G +V V Q K FG Sbjct: 362 QQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFG 421 Query: 1212 FIRYSTHGEAALAIQMANGLVVRGKPIK 1295 F+ + G A AIQ NG + K +K Sbjct: 422 FVSFDNPGSAQAAIQSMNGFQIGMKRLK 449
>Q76LC6:RBM24_DANRE RNA-binding protein 24 - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 230 Score = 47.8 bits (112), Expect = 2e-04 Identities = 25/67 (37%), Positives = 40/67 (59%) Frame = +3 Query: 690 TQREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRN 869 T ++DT+ + IFVG L D++L F + +A V+ D +TG+SRGYGFV+ + Sbjct: 3 TTQKDTT-YTKIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMAD 61 Query: 870 QQEAETA 890 + A+ A Sbjct: 62 RSAADRA 68
>Q91579:CEL3A_XENLA CUG-BP- and ETR-3-like factor 3-A - Xenopus laevis (African clawed| frog) Length = 462 Score = 47.8 bits (112), Expect = 2e-04 Identities = 27/81 (33%), Positives = 43/81 (53%) Frame = +3 Query: 693 QREDTSGHFHIFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQ 872 QRE G +IF+ L E D+ + F + + A+V D T +S+ +GFVSF N Sbjct: 370 QREGPEG-CNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNP 428 Query: 873 QEAETAITEMTGKWLGSRQIR 935 A+ AI M G +G ++++ Sbjct: 429 GSAQAAIQAMNGFQIGMKRLK 449 Score = 34.7 bits (78), Expect = 1.4 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 4/88 (4%) Frame = +3 Query: 1044 QDTGSKENPENNPDFTTVYVGNLGHEVNRDELHRHFYNLGVGAIEEVRVQ----QEKGFG 1211 Q ++ P+ +++ +L E E+ + F G +V V Q K FG Sbjct: 362 QQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFG 421 Query: 1212 FIRYSTHGEAALAIQMANGLVVRGKPIK 1295 F+ + G A AIQ NG + K +K Sbjct: 422 FVSFDNPGSAQAAIQAMNGFQIGMKRLK 449
>Q2U256:PPIL4_ASPOR Peptidyl-prolyl cis-trans isomerase-like 4 - Aspergillus oryzae| Length = 461 Score = 47.4 bits (111), Expect = 2e-04 Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 6/132 (4%) Frame = +3 Query: 723 IFVGDLSSEVNDATLYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEM 902 +FV L+ D L+ FS + + V+ D +TG S Y F+ F NQ++ E A +M Sbjct: 250 LFVCKLNPVTQDEDLHLIFSRFGTILSCEVIRDKRTGDSLQYAFIEFENQKDCEQAYFKM 309 Query: 903 TGKWLGSRQIRCNWATKTNAEEKQETDNHNAVVLTNGGSSN-----AAMEANQDTGSKEN 1067 G + +I +++ + K NA + G A++E + + +N Sbjct: 310 QGVLIDDHRIHVDFSQSVS---KLSESWRNATISKRSGQRGGFGGVASLEKKRQYRASDN 366 Query: 1068 P-ENNPDFTTVY 1100 E D+T V+ Sbjct: 367 AREKENDYTLVF 378 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 311,110,646 Number of extensions: 6732032 Number of successful extensions: 22356 Number of sequences better than 10.0: 551 Number of HSP's gapped: 21911 Number of HSP's successfully gapped: 1090 Length of query: 628 Length of database: 100,686,439 Length adjustment: 119 Effective length of query: 509 Effective length of database: 68,045,334 Effective search space: 34635075006 Effective search space used: 34635075006 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
