ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf52g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK120740:Os03g0733000 85 3e-17
2Os05g0517800:Os05g0517800 60 8e-10
3AK069580:Os11g0677400 30 1.2
4AK119538:Os03g0108300 29 1.6
5AK101109:Os03g0625900 29 2.1
6AK061689:Os02g0798600 29 2.1
7AK067131:Os03g0221600 28 2.7
8AK069137: 28 3.5
9AK121769:Os12g0145900 28 3.5
10AK104370:Os11g0195600 28 4.7
11AK068003:Os11g0195600 28 4.7
12Os06g0696900:Os06g0696900 27 6.0
13AK103859:Os01g0915800 27 6.0
14AK064697:Os10g0426600 27 6.0
15Os01g0802900:Os01g0802900 27 6.1
16Os03g0732800:Os03g0732800 27 7.9
17AK105182:Os03g0438200 27 7.9
18AK071778:Os02g0138600 27 7.9
19AK119618:Os03g0253100 27 8.0
20AK100969:Os04g0647300 27 8.0

>AK120740:Os03g0733000 |
          Length = 76
 Score = 84.7 bits (208), Expect = 3e-17
 Identities = 43/75 (57%), Positives = 53/75 (70%)
 Frame = +2

Query: 53  MALTNFIVTAAVVGGALLLFTTDVRKSGAVFRRNARQIRQWLEEDTXXXXXXXXXXXXXX 232
           MALTNF++T A VG A LLFTTD+RKSGA+FRRNARQIR WLEE++              
Sbjct: 1   MALTNFVLTVAAVGAAALLFTTDIRKSGAMFRRNARQIRAWLEEES--ASAASRSAKDAP 58

Query: 233 XXXLDGEIPKDKPKD 277
              L+G+IPK+KPK+
Sbjct: 59  PKKLNGDIPKEKPKE 73



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>Os05g0517800:Os05g0517800 |
          Length = 77

 Score = 60.1 bits (144), Expect = 8e-10
 Identities = 27/46 (58%), Positives = 37/46 (80%)
 Frame = +2

Query: 53  MALTNFIVTAAVVGGALLLFTTDVRKSGAVFRRNARQIRQWLEEDT 190
           MALTNFI+T   VG A+LL  +DV++S ++FRRN R IR+WLEE++
Sbjct: 1   MALTNFILTVVGVGTAVLLLRSDVKQSASIFRRNVRHIRKWLEEES 46



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>AK069580:Os11g0677400 |
          Length = 82

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
 Frame = -3

Query: 127 PDVGSEEKQRPAH---HRRRHDEVGERH 53
           PD G    +RP H   HRR H  +GE H
Sbjct: 15  PDEGEPRPRRPPHPPHHRRHHPRIGEVH 42



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>AK119538:Os03g0108300 |
          Length = 236

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 151 AAEDGAGLPDVGSEEKQRPAHHRRRHDEVGE 59
           AA DGAG     ++E+ R  H RRRH   G+
Sbjct: 28  AAGDGAGGAVDAADERVRARHRRRRHHREGD 58



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>AK101109:Os03g0625900 |
          Length = 511

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -3

Query: 169 SDLAGVAAEDGAGLPDVGSEEKQRPAHHRRRHDEVGERHLRLS 41
           SDL GVAA    G+ D G EE++         +  GE+ +R++
Sbjct: 51  SDLEGVAAAAAGGVGDDGEEEEE----EEEEQETAGEKKMRIA 89



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>AK061689:Os02g0798600 |
          Length = 389

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -1

Query: 255 ISPSSFLGGGTAS---FADLDAAEAVSSSSHCRIWRALRRKTAPDFRTSVVKRSSAPPTT 85
           +S S F     AS    ADL+A E    +S   I  + R  T+    TSV+  +S  P+T
Sbjct: 50  VSESGFSSSQRASERIMADLEAGEIAHGTSSTTIMSSERSDTSQSSLTSVLPATSTAPST 109



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>AK067131:Os03g0221600 |
          Length = 480

 Score = 28.5 bits (62), Expect = 2.7
 Identities = 16/34 (47%), Positives = 18/34 (52%)
 Frame = -3

Query: 178 EPLSDLAGVAAEDGAGLPDVGSEEKQRPAHHRRR 77
           E +   A V AE G+G P VG   K  P H RRR
Sbjct: 321 EAVDAAAPVVAEPGSGEPCVGRVIKALPRHVRRR 354



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>AK069137: |
          Length = 527

 Score = 28.1 bits (61), Expect = 3.5
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +3

Query: 195 PPHPSLQKKQFRLPRS 242
           PPHPS+Q++  RLP S
Sbjct: 3   PPHPSIQRRSHRLPDS 18



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>AK121769:Os12g0145900 |
          Length = 203

 Score = 28.1 bits (61), Expect = 3.5
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = -3

Query: 133 GLPDVGSEEKQRPAHHRRRHDEVGERHLRLSLSPG 29
           G+P VG   +QR  H R    E   R LR  L PG
Sbjct: 5   GVPHVGDPPRQRQVHQRPARQE--RRRLRRRLRPG 37



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>AK104370:Os11g0195600 |
          Length = 476

 Score = 27.7 bits (60), Expect = 4.7
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
 Frame = -1

Query: 276 SFGLSLGISPSSFLGGGTASFADLDAAEAVSSSSHCRIWRALRRKTAPDFRTS------- 118
           + GLSLGI+ +   GG   S   +     V+S    ++WR+L+      F  S       
Sbjct: 206 TIGLSLGIAQTVANGGFMGSLTGISVGTGVTSMQ--KVWRSLQAFGDIAFAYSYSIILIE 263

Query: 117 VVKRSSAPPTTAAVTMKLVSAI 52
           +     APP + A  MK  + +
Sbjct: 264 IQDTIKAPPPSEAKVMKRATMV 285



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>AK068003:Os11g0195600 |
          Length = 476

 Score = 27.7 bits (60), Expect = 4.7
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
 Frame = -1

Query: 276 SFGLSLGISPSSFLGGGTASFADLDAAEAVSSSSHCRIWRALRRKTAPDFRTS------- 118
           + GLSLGI+ +   GG   S   +     V+S    ++WR+L+      F  S       
Sbjct: 206 TIGLSLGIAQTVANGGFMGSLTGISVGTGVTSMQ--KVWRSLQAFGDIAFAYSYSIILIE 263

Query: 117 VVKRSSAPPTTAAVTMKLVSAI 52
           +     APP + A  MK  + +
Sbjct: 264 IQDTIKAPPPSEAKVMKRATMV 285



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>Os06g0696900:Os06g0696900 |
          Length = 157

 Score = 27.3 bits (59), Expect = 6.0
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -3

Query: 100 RPAHHRRRHDEVGERHLRLSLSPGPVCRGGGQ 5
           RPA  RRRH  +G R    + S G   RGGG+
Sbjct: 21  RPAMRRRRHGRMGGRRQGEAASAGE--RGGGE 50



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>AK103859:Os01g0915800 |
          Length = 158

 Score = 27.3 bits (59), Expect = 6.0
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +2

Query: 59  LTNFIVTAAVVGGALLLFTTDVRKSGAV 142
           L  F V AAVV  A L+ T   +KSG V
Sbjct: 10  LVRFAVAAAVVVAAALILTASAKKSGDV 37



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>AK064697:Os10g0426600 |
          Length = 409

 Score = 27.3 bits (59), Expect = 6.0
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 174 GSRRTPPPPHPSLQKKQFRLPRSW 245
           G +  PPPP PSL   +F    SW
Sbjct: 120 GDKLPPPPPPPSLDANKFFSHASW 143



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>Os01g0802900:Os01g0802900 |
          Length = 501

 Score = 27.3 bits (59), Expect = 6.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 178 RGGHRLRRIQVCKRSSSASQEAGWRDSQGQAKG 276
           RGG  LRR    +R    ++EA  RD +G+A+G
Sbjct: 406 RGGVELRRHGGGRRELDDAEEADERDGEGRAEG 438



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>Os03g0732800:Os03g0732800 |
          Length = 324

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = -3

Query: 151 AAEDGAGLPDVGSEEKQRPAHHRRRHDEVGERHLRLSLSPGPVCRGGG 8
           A +D +G  D  S      AHH+ RH ++   H       G    GGG
Sbjct: 38  AGDDPSGADDTHSPTTTAAAHHQHRHGQLMVEH-------GGASSGGG 78



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>AK105182:Os03g0438200 |
          Length = 145

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 192 PPPHPSLQKKQFRLPRSWMER 254
           PPPHP  Q++Q    R W+ R
Sbjct: 69  PPPHPQPQQQQATGGRGWIRR 89



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>AK071778:Os02g0138600 |
          Length = 375

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 10/45 (22%)
 Frame = +3

Query: 189 PPPPHPSLQKKQFRLPR-------SWMERF---PRTSQRIIEIDH 293
           PPPP P       RLPR        W+  F    R S +++ +DH
Sbjct: 53  PPPPPPLAMVVDARLPRPCITFCAPWVMHFMLLGRNSDKVLAVDH 97



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>AK119618:Os03g0253100 |
          Length = 512

 Score = 26.9 bits (58), Expect = 8.0
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = -1

Query: 261 LGISPSSFLG---GGTASFADLDAAEAVSSSSHC 169
           LG    S LG   GG A+  DLD   A++ S+HC
Sbjct: 206 LGTVNLSCLGQSSGGNAAGRDLDLLHAIAQSAHC 239



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>AK100969:Os04g0647300 |
          Length = 587

 Score = 26.9 bits (58), Expect = 8.0
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -1

Query: 429 YTSAKMLISKWKHISHAITYELQ 361
           Y+ AK L S W+H S+  +YE Q
Sbjct: 284 YSPAKFLYSWWQHASNLASYEQQ 306


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 14,435,210
Number of extensions: 298086
Number of successful extensions: 1501
Number of sequences better than 10.0: 20
Number of HSP's gapped: 1492
Number of HSP's successfully gapped: 20
Length of query: 174
Length of database: 15,399,855
Length adjustment: 94
Effective length of query: 80
Effective length of database: 11,636,001
Effective search space: 930880080
Effective search space used: 930880080
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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