ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf52g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8JHZ8:PALD_CHICK Paladin - Gallus gallus (Chicken) 34 0.26
2P18251:BLA1_ENTCL Beta-lactamase Ohio-1 precursor - Enterobacter... 31 2.2
3Q03149:WA_EMENI Conidial yellow pigment biosynthesis polyketide ... 31 2.9
4Q9QWV9:CCNT1_MOUSE Cyclin-T1 - Mus musculus (Mouse) 30 4.9
5P37991:COAT_CVB Coat protein - Chrysanthemum virus B (CVB) 29 8.4
6Q8BL07:GP150_MOUSE Probable G-protein coupled receptor 150 - Mus... 25 9.0

>Q8JHZ8:PALD_CHICK Paladin - Gallus gallus (Chicken)|
          Length = 868
 Score = 34.3 bits (77), Expect = 0.26
 Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +3

Query: 174 GSRRTPPPPHPSLQ--KKQFRLPRSWMERFPRTSQRIIEIDHLVA 302
           G+   P PPHP+    + +FR+ +S++E  P+  Q + E+D ++A
Sbjct: 333 GAAPKPDPPHPAKMPPRARFRVIQSFIEMVPKGQQMVEEVDSVIA 377



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>P18251:BLA1_ENTCL Beta-lactamase Ohio-1 precursor - Enterobacter cloacae|
          Length = 286

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
 Frame = -3

Query: 139 GAGLP--DVGSEEKQRPAHHRRR----HDEVGERHLRLSLSPGPVC 20
           GAGL   D G E+ +R  H+RR+    +  V E+HL   ++ G +C
Sbjct: 74  GAGLARVDAGDEQLERKIHYRRQDLVDYSPVSEKHLADGMTVGELC 119



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>Q03149:WA_EMENI Conidial yellow pigment biosynthesis polyketide synthase - Emericella|
            nidulans (Aspergillus nidulans)
          Length = 2157

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = -1

Query: 276  SFGLSLGISPSSFLGGGTASFADLDAAEAVSSS 178
            SF  SLGI+PS  LG     FA ++AA  +S+S
Sbjct: 985  SFWASLGITPSFVLGHSLGDFAAMNAAGVLSTS 1017



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>Q9QWV9:CCNT1_MOUSE Cyclin-T1 - Mus musculus (Mouse)|
          Length = 724

 Score = 30.0 bits (66), Expect = 4.9
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = -3

Query: 112 EEKQR--PAHHRRRHDEVGERHLRLSLSPGPVCR 17
           +EKQR  P++H   H+    RH  L L  GPV +
Sbjct: 506 KEKQRTHPSNHHHHHNHHSHRHSHLQLPAGPVSK 539



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>P37991:COAT_CVB Coat protein - Chrysanthemum virus B (CVB)|
          Length = 315

 Score = 29.3 bits (64), Expect = 8.4
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 174 GSRRTPPPPHPSLQKKQFRLPRSWMERFPRTSQRIIE 284
           GS  TPPPP P+   ++ RL  + MER  R  ++++E
Sbjct: 16  GSTPTPPPPPPARTAEEARLRLAEMER-EREQEQLLE 51



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>Q8BL07:GP150_MOUSE Probable G-protein coupled receptor 150 - Mus musculus (Mouse)|
          Length = 427

 Score = 25.0 bits (53), Expect(2) = 9.0
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 308 ISCDQMVYFNDPLACPWESLHPASWEAELLL 216
           + CD + YF   LA  W S     WE E L+
Sbjct: 298 VGCD-LPYFAARLAAAWSSKPAGDWERESLV 327



 Score = 22.7 bits (47), Expect(2) = 9.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 171 CRIWRALRRK 142
           CR+WR LRR+
Sbjct: 353 CRLWRRLRRR 362


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 83,754,220
Number of extensions: 1567466
Number of successful extensions: 4472
Number of sequences better than 10.0: 6
Number of HSP's gapped: 4466
Number of HSP's successfully gapped: 7
Length of query: 174
Length of database: 100,686,439
Length adjustment: 106
Effective length of query: 68
Effective length of database: 71,611,169
Effective search space: 4869559492
Effective search space used: 4869559492
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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