>P27694:RFA1_HUMAN Replication protein A 70 kDa DNA-binding subunit - Homo sapiens|
            (Human)
          Length = 616
 Score =  272 bits (695), Expect = 4e-72
 Identities = 178/525 (33%), Positives = 265/525 (50%), Gaps = 5/525 (0%)
 Frame = +2

Query: 44   GDPLLPLRVGGPVRQTPEPRPRPHPQLHMQRHPK*VGQDGASPDSIMLKPRHDVKSASQI 223
            G+P+ P   G    Q   P P   P    +  P    Q+G+S     +   +    AS+ 
Sbjct: 113  GNPV-PYNEGLGQPQVAPPAPAASPAASSRPQP----QNGSSGMGSTVSKAY---GASKT 164

Query: 224  VSEQRGNAAPAARLAMTRRVHPLISLNPYQGNWVIKVRVTSKGNLRSYRNARGEGHVFNV 403
              +  G +          +V P+ SL PYQ  W I  RVT+K  +R++ N+RGEG +F++
Sbjct: 165  FGKAAGPSLSHTSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSL 224

Query: 404  ELTDEDGTQIQATMFNEPAKKFYPVFELGKVYYISKGSLRIANKQFKTVQNDYEMTLXXX 583
            EL DE G +I+AT FNE   KF+P+ E+ KVYY SKG+L+IANKQF  V+NDYEMT    
Sbjct: 225  ELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNE 283

Query: 584  XXXXXXXGESFIPPVQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIP 763
                    +  +P VQ++F  ID L        LVDIIG+ +S      I  + +N  + 
Sbjct: 284  TSVMPCEDDHHLPTVQFDFTGIDDL-ENKSKDSLVDIIGICKSYEDATKITVRSNNREVA 342

Query: 764  KRDIVVADDSNKTVTVSLWNDLATTLGEELLDMVDSA--PIVAIKSLKVSDFQGVSVSTV 937
            KR+I + D S K VT +LW + A        D  D +  P++AIK  +VSDF G S+S +
Sbjct: 343  KRNIYLMDTSGKVVTATLWGEDA--------DKFDGSRQPVLAIKGARVSDFGGRSLSVL 394

Query: 938  GKSTLVINPELPETEKLRAWYESEGKGTXXXXXXXXXXXXXXXXXXXXYSDRVFLSHITS 1117
              ST++ NP++PE  KLR W+++EG+                       +    L  + S
Sbjct: 395  SSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGSNTNWKT----LYEVKS 450

Query: 1118 DPNLGQ-DKPVFFSLCANISHIKPDQTMWYRACTT--CNKKVTEALGSGYWCEGCQKNYE 1288
            + NLGQ DKP +FS  A + +++ +  M Y+AC T  CNKKV +     Y CE C   + 
Sbjct: 451  E-NLGQGDKPDYFSSVATVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDTEFP 508

Query: 1289 ECSLRYIMVIKVSDPTGEAWLSLFNDQAERIVGCSADNLDRIRKEEGDDMFQLKLKEATW 1468
                R I+ + ++D     W++ F + AE I+G +A  L  + K++ +  F+   + A +
Sbjct: 509  NFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGEL-KDKNEQAFEEVFQNANF 567

Query: 1469 VPHLFRVSVAQNEYMGEKRQRITVRSESPVDFAAEARYQLEEIAR 1603
               +FRV V    Y  E R + TV    PVD+    R  +  I R
Sbjct: 568  RSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRR 612

>Q8VEE4:RFA1_MOUSE Replication protein A 70 kDa DNA-binding subunit - Mus musculus|
            (Mouse)
          Length = 623

 Score =  268 bits (686), Expect = 5e-71
 Identities = 174/529 (32%), Positives = 260/529 (49%), Gaps = 15/529 (2%)
 Frame = +2

Query: 62   LRVGGPVRQTPEPRPRPHPQLHMQRHPK*VGQDGASPDSIMLKPRHDVKSASQIVSEQRG 241
            L++G PV        +   Q   Q+         A+P +   +P++         ++  G
Sbjct: 110  LKIGNPVPYNEGYGQQQQQQQQQQQQAVPSPASAATPPASKPQPQNGSLGMGSTAAKAYG 169

Query: 242  NAAPAARLAMT----------RRVHPLISLNPYQGNWVIKVRVTSKGNLRSYRNARGEGH 391
             + P  + A T           +V P+ SL PYQ  W I  RVT+K  +R++ N+RGEG 
Sbjct: 170  ASKPFGKPAGTGLLQPSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGK 229

Query: 392  VFNVELTDEDGTQIQATMFNEPAKKFYPVFELGKVYYISKGSLRIANKQFKTVQNDYEMT 571
            +F++EL DE G +I+AT FNE   KF+P+ E+ KVYY SKG+L+IANKQF  V+NDYEMT
Sbjct: 230  LFSLELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGALKIANKQFSAVKNDYEMT 288

Query: 572  LXXXXXXXXXXGESFIPPVQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDN 751
                           +P VQ++F  I  L        LVDIIG+ +S   ++ I  K +N
Sbjct: 289  FNNETSVLPCEDGHHLPTVQFDFTGIGDLESKAKD-ALVDIIGICKSYEDSIKITVKSNN 347

Query: 752  ESIPKRDIVVADDSNKTVTVSLWNDLATTLGEELLDMVDSA--PIVAIKSLKVSDFQGVS 925
              + KR+I + D S K VT +LW + A        D  D +  P++AIK  +VSDF G S
Sbjct: 348  REVAKRNIYLMDMSGKVVTTTLWGEDA--------DKFDGSRQPVMAIKGARVSDFGGRS 399

Query: 926  VSTVGKSTLVINPELPETEKLRAWYESEGKGTXXXXXXXXXXXXXXXXXXXXYSDRVFLS 1105
            +S +  ST+++NP++PE  KLR W++SEG+                       +      
Sbjct: 400  LSVLSSSTVIVNPDIPEAYKLRGWFDSEGQALDGVSISDHRSGGAGGGNTNWKT-----L 454

Query: 1106 HITSDPNLGQ-DKPVFFSLCANISHIKPDQTMWYRACTT--CNKKVTEALGSGYWCEGCQ 1276
            H     NLGQ DK  +FS  A +  ++ +  M Y+AC T  CNKKV +     Y CE C 
Sbjct: 455  HEAKSENLGQGDKADYFSTVAAVVFLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCD 513

Query: 1277 KNYEECSLRYIMVIKVSDPTGEAWLSLFNDQAERIVGCSADNLDRIRKEEGDDMFQLKLK 1456
            + +     R I+   ++D     W++ F + AE I+G +   L  + KE+ +  F+   +
Sbjct: 514  REFPNFKYRMILSANIADFQENQWVTCFQESAEAILGQNTMYLGEL-KEKNEQAFEEVFQ 572

Query: 1457 EATWVPHLFRVSVAQNEYMGEKRQRITVRSESPVDFAAEARYQLEEIAR 1603
             A +    FR+ V    Y  E R + TV    PVDF    R  +  I +
Sbjct: 573  NANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDFRDYGRRLIANIRK 621

>Q5R7Q4:RFA1_PONPY Replication protein A 70 kDa DNA-binding subunit - Pongo pygmaeus|
            (Orangutan)
          Length = 616

 Score =  268 bits (685), Expect = 6e-71
 Identities = 177/525 (33%), Positives = 263/525 (50%), Gaps = 5/525 (0%)
 Frame = +2

Query: 44   GDPLLPLRVGGPVRQTPEPRPRPHPQLHMQRHPK*VGQDGASPDSIMLKPRHDVKSASQI 223
            G+P+ P   G    Q   P P   P    +  P    Q+G S     +   +    AS+ 
Sbjct: 113  GNPV-PYNEGLGQPQVAPPAPAASPAASSRPQP----QNGTSGAGSTVSKAY---GASKT 164

Query: 224  VSEQRGNAAPAARLAMTRRVHPLISLNPYQGNWVIKVRVTSKGNLRSYRNARGEGHVFNV 403
              +  G +          +V P+ SL PYQ  W I  RVT+K  +R++ N+RGE  +F++
Sbjct: 165  FGKAAGPSLSHNSGGTQSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEEKLFSL 224

Query: 404  ELTDEDGTQIQATMFNEPAKKFYPVFELGKVYYISKGSLRIANKQFKTVQNDYEMTLXXX 583
            EL DE G +I+AT FNE   KF+P+ E+ KVYY SKG+L+IANKQF  V+NDYEMT    
Sbjct: 225  ELVDESG-EIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNE 283

Query: 584  XXXXXXXGESFIPPVQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIP 763
                    +  +P VQ++F  ID L        LVDIIG+ +S      I  + +N  + 
Sbjct: 284  TSVMPCEDDHHLPTVQFDFTGIDDL-ENKSKDSLVDIIGICKSYEDATKITVRSNNREVA 342

Query: 764  KRDIVVADDSNKTVTVSLWNDLATTLGEELLDMVDSA--PIVAIKSLKVSDFQGVSVSTV 937
            KR+I + D S K VT +LW + A        D  D +  P++AIK  +VSDF G S+S +
Sbjct: 343  KRNIYLMDTSGKVVTATLWGEDA--------DKFDGSRQPVLAIKGARVSDFGGRSLSVL 394

Query: 938  GKSTLVINPELPETEKLRAWYESEGKGTXXXXXXXXXXXXXXXXXXXXYSDRVFLSHITS 1117
              ST++ NP++PE  KLR W+++EG+                       +    L  + S
Sbjct: 395  SSSTIIANPDIPEAYKLRGWFDAEGQALDGVSISDLKSGGVGGGNTNWKT----LYEVKS 450

Query: 1118 DPNLGQ-DKPVFFSLCANISHIKPDQTMWYRACTT--CNKKVTEALGSGYWCEGCQKNYE 1288
            + NLGQ DKP +FS  A + +++ +  M Y+AC T  CNKKV +     Y CE C   + 
Sbjct: 451  E-NLGQGDKPDYFSSVATVVYLRKENCM-YQACPTQDCNKKVIDQQNGLYRCEKCDTEFP 508

Query: 1289 ECSLRYIMVIKVSDPTGEAWLSLFNDQAERIVGCSADNLDRIRKEEGDDMFQLKLKEATW 1468
                R I+ + ++D     W++ F + AE I+G +A  L  + K++ +  F+   + A +
Sbjct: 509  NFKYRMILSVNIADFQENQWVTCFQESAEAILGQNAAYLGEL-KDKNEQAFEEVFQNANF 567

Query: 1469 VPHLFRVSVAQNEYMGEKRQRITVRSESPVDFAAEARYQLEEIAR 1603
               +FRV V    Y  E R + TV    PVD+    R  +  I R
Sbjct: 568  RSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVMSIRR 612

>Q01588:RFA1_XENLA Replication protein A 70 kDa DNA-binding subunit - Xenopus laevis|
            (African clawed frog)
          Length = 609

 Score =  257 bits (657), Expect = 1e-67
 Identities = 168/523 (32%), Positives = 264/523 (50%), Gaps = 5/523 (0%)
 Frame = +2

Query: 59   PLRVGGPVRQTPEPRPRPHPQLHMQRHPK*VGQDGASPDSIMLKPRHDVKSASQIVSEQR 238
            P   G P    P P   P P       P  +  + A P S M +    +     +++   
Sbjct: 117  PYNDGQPQPAAPAPASAPAPA------PSKLQNNSAPPPS-MNRGTSKLFGGGSLLNTPG 169

Query: 239  GNAAPAARLAMTRRVHPLISLNPYQGNWVIKVRVTSKGNLRSYRNARGEGHVFNVELTDE 418
            G+ +         +V P+ SLNPYQ  W ++ RVT+KG +R++ N+RGEG +F++E+ DE
Sbjct: 170  GSQS---------KVVPIASLNPYQSKWTVRARVTNKGQIRTWSNSRGEGKLFSIEMVDE 220

Query: 419  DGTQIQATMFNEPAKKFYPVFELGKVYYISKGSLRIANKQFKTVQNDYEMTLXXXXXXXX 598
             G +I+AT FNE A KF+ + E+ KVYY SKG+L+IANKQ+ +V+NDYEMT         
Sbjct: 221  SG-EIRATAFNEQADKFFSIIEVNKVYYFSKGTLKIANKQYTSVKNDYEMTFNSETSVIP 279

Query: 599  XXGESFIPPVQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIV 778
                + +P VQ+ FV I  L        ++DIIGV ++V     +  K +N  + KR I 
Sbjct: 280  CDDSADVPMVQFEFVSIGEL-ESKNKDTVLDIIGVCKNVEEVTKVTIKSNNREVSKRSIH 338

Query: 779  VADDSNKTVTVSLWNDLATTLGEELLDMVDSA--PIVAIKSLKVSDFQGVSVSTVGKSTL 952
            + D S K V+ +LW + A        D  D +  P+VAIK  ++SDF G S+S +  ST+
Sbjct: 339  LMDSSGKVVSTTLWGEDA--------DKFDGSRQPVVAIKGARLSDFGGRSLSVLSSSTV 390

Query: 953  VINPELPETEKLRAWYESEGKGTXXXXXXXXXXXXXXXXXXXXYSDRVFLSHITSDPNLG 1132
            +INP++PE  KLRAW++SEG+                       S    L  + ++ NLG
Sbjct: 391  MINPDIPEAFKLRAWFDSEGQVVEGTSISESRGGGTGGGNTNWKS----LLEVKNE-NLG 445

Query: 1133 Q-DKPVFFSLCANISHIKPDQTMWYRACTT--CNKKVTEALGSGYWCEGCQKNYEECSLR 1303
              +K  +F+  A I +++ +  + Y+AC +  CNKKV +     + CE C K +     R
Sbjct: 446  HGEKADYFTSVATIVYLRKENCL-YQACPSQDCNKKVIDQQNGLFRCEKCNKEFPNFKYR 504

Query: 1304 YIMVIKVSDPTGEAWLSLFNDQAERIVGCSADNLDRIRKEEGDDMFQLKLKEATWVPHLF 1483
             I+   ++D     W++ F + AE I+G +A  L  + KE+ +  +    + A +  + F
Sbjct: 505  LILSANIADFGENQWITCFQESAESILGQNATYLGEL-KEKNEQAYDEVFQNANFRSYTF 563

Query: 1484 RVSVAQNEYMGEKRQRITVRSESPVDFAAEARYQLEEIARLTS 1612
            R  V    Y  E R + T     PVD    +R  +  I ++ +
Sbjct: 564  RARVKLETYNDESRIKATAVDVKPVDHKEYSRRLIMNIRKMAT 606

>Q5ZJJ2:RFA1_CHICK Replication protein A 70 kDa DNA-binding subunit - Gallus gallus|
            (Chicken)
          Length = 614

 Score =  256 bits (654), Expect = 2e-67
 Identities = 153/445 (34%), Positives = 234/445 (52%), Gaps = 3/445 (0%)
 Frame = +2

Query: 278  RVHPLISLNPYQGNWVIKVRVTSKGNLRSYRNARGEGHVFNVELTDEDGTQIQATMFNEP 457
            +V P+ SLNPYQ  W I  RVT KG +R++ N+RGEG +F++EL DE G +I+AT FN+ 
Sbjct: 180  KVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESG-EIRATAFNDQ 238

Query: 458  AKKFYPVFELGKVYYISKGSLRIANKQFKTVQNDYEMTLXXXXXXXXXXGESFIPPVQYN 637
            A KF+P+ EL KVYY +KG+L+ ANKQ+  V+NDYE+T               +P VQ++
Sbjct: 239  ADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFNNETSVVPCDDAQHLPSVQFD 298

Query: 638  FVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTVSL 817
            FV I  L        +VD+IG+ +S      I  K  N  + KR++ + D S K VT +L
Sbjct: 299  FVSISDL-ENTPKDSIVDVIGICKSYEDVTKIVVKASNREVSKRNVHLMDTSGKLVTATL 357

Query: 818  WNDLATTLGEELLDMVDSAPIVAIKSLKVSDFQGVSVSTVGKSTLVINPELPETEKLRAW 997
            W + A     E  D     P++AIK  +VSDF G S+S +  ST+V+NP+ PE  KLR W
Sbjct: 358  WGNEA-----EKFD-GSRQPVIAIKGARVSDFGGRSLSVLSSSTVVVNPDSPEAFKLRGW 411

Query: 998  YESEGKGTXXXXXXXXXXXXXXXXXXXXYSDRVFLSHITSDPNLGQ-DKPVFFSLCANIS 1174
            ++SEG+                       +      +      LGQ DK  +FS    I 
Sbjct: 412  FDSEGQ-----LLECASISDVRGGSASGVNTNWKTLYEAKSERLGQGDKADYFSCVGTIV 466

Query: 1175 HIKPDQTMWYRACTT--CNKKVTEALGSGYWCEGCQKNYEECSLRYIMVIKVSDPTGEAW 1348
            H++ +  M Y+AC +  CNKKV +     Y CE C + +     R ++++ ++D     W
Sbjct: 467  HLRKENCM-YQACPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADSLDYQW 525

Query: 1349 LSLFNDQAERIVGCSADNLDRIRKEEGDDMFQLKLKEATWVPHLFRVSVAQNEYMGEKRQ 1528
            ++ F + AE I+G SA  L  + K++ +  F+   + A +  + F++ V    Y  E R 
Sbjct: 526  VTCFQESAEFILGQSATFLGEL-KDKNEQAFEEVFQNANFNTYEFKIRVKLETYNDESRI 584

Query: 1529 RITVRSESPVDFAAEARYQLEEIAR 1603
            + T     PV++   ++  +  I R
Sbjct: 585  KATALDVKPVNYREYSKRLIASIRR 609

>Q5FW17:RFA1_XENTR Replication protein A 70 kDa DNA-binding subunit - Xenopus tropicalis|
            (Western clawed frog) (Silurana tropicalis)
          Length = 609

 Score =  253 bits (647), Expect = 2e-66
 Identities = 151/450 (33%), Positives = 244/450 (54%), Gaps = 5/450 (1%)
 Frame = +2

Query: 278  RVHPLISLNPYQGNWVIKVRVTSKGNLRSYRNARGEGHVFNVELTDEDGTQIQATMFNEP 457
            +V P+ SLNPYQ  W ++ RVT+KG +R++ N+RGEG +F++E+ DE G +I+AT FNE 
Sbjct: 175  KVVPIASLNPYQSKWTVRARVTNKGQIRTWSNSRGEGKLFSIEMVDESG-EIRATAFNEQ 233

Query: 458  AKKFYPVFELGKVYYISKGSLRIANKQFKTVQNDYEMTLXXXXXXXXXXGESFIPPVQYN 637
            A KF+ + E+ KVYY SKG+L+IANKQ+ +V+NDYEMT             + +P VQ+ 
Sbjct: 234  ADKFFSLIEVNKVYYFSKGTLKIANKQYTSVKNDYEMTFNSETSVIPCDDSADVPMVQFE 293

Query: 638  FVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTVSL 817
            FV I  L        ++DIIG+ ++      +  + +N  + KR+I + D S K V+ +L
Sbjct: 294  FVPIGEL-ESKNKDTVLDIIGICKNAEEVTKVTIRSNNREVSKRNINLMDSSGKVVSTTL 352

Query: 818  WNDLATTLGEELLDMVDSA--PIVAIKSLKVSDFQGVSVSTVGKSTLVINPELPETEKLR 991
            W + A        D  D +  P+VAIK  ++SDF G S+S +  ST++INP++PE  KLR
Sbjct: 353  WGEDA--------DKFDGSRQPVVAIKGARLSDFGGRSLSVLSSSTVMINPDIPEAFKLR 404

Query: 992  AWYESEGKGTXXXXXXXXXXXXXXXXXXXXYSDRVFLSHITSDPNLGQ-DKPVFFSLCAN 1168
            AW++SEG+                       ++   L  + ++ NLG  +K  +F+  A 
Sbjct: 405  AWFDSEGQ-----VVEGTSISESRGGTGGGNTNWKSLLEVKTE-NLGHGEKADYFTSVAT 458

Query: 1169 ISHIKPDQTMWYRACTT--CNKKVTEALGSGYWCEGCQKNYEECSLRYIMVIKVSDPTGE 1342
            I +++ +  + Y+AC +  CNKKV +     + CE C K +     R I+   ++D    
Sbjct: 459  IVYLRKENCL-YQACPSQDCNKKVIDQQNGLFRCEKCDKEFPNYKYRLILSANIADFGEN 517

Query: 1343 AWLSLFNDQAERIVGCSADNLDRIRKEEGDDMFQLKLKEATWVPHLFRVSVAQNEYMGEK 1522
             W++ F + AE I+G +A  L  + KE+ +  +    + A +  + FR+ V    Y  E 
Sbjct: 518  QWITCFQESAESILGQNATYLGEL-KEKNEQAYDEVFQNANFRSYTFRIRVKLETYNDES 576

Query: 1523 RQRITVRSESPVDFAAEARYQLEEIARLTS 1612
            R + T     PVD    +R  +  I ++ +
Sbjct: 577  RIKATAMDVKPVDHKEYSRRLIMNIRKMAA 606

>Q92372:RFA1_SCHPO Replication factor-A protein 1 - Schizosaccharomyces pombe (Fission|
            yeast)
          Length = 609

 Score =  252 bits (644), Expect = 4e-66
 Identities = 143/445 (32%), Positives = 243/445 (54%), Gaps = 2/445 (0%)
 Frame = +2

Query: 251  PAARLAMTRRVHPLISLNPYQGNWVIKVRVTSKGNLRSYRNARGEGHVFNVELTDEDGTQ 430
            PAA  +++  ++P+  L+PYQ  W I+ RVT+K  ++ + N RGEG +F+V L DE G +
Sbjct: 169  PAAPNSLSTIIYPIEGLSPYQNKWTIRARVTNKSEVKHWHNQRGEGKLFSVNLLDESG-E 227

Query: 431  IQATMFNEPAKKFYPVFELGKVYYISKGSLRIANKQFKTVQNDYEMTLXXXXXXXXXXGE 610
            I+AT FN+    FY + + G VYYIS+  + IA KQ+  VQN+YE+             +
Sbjct: 228  IRATGFNDQVDAFYDILQEGSVYYISRCRVNIAKKQYTNVQNEYELMFERDTEIRKAEDQ 287

Query: 611  SFIPPVQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADD 790
            + +P  +++FV +  +G  V    ++D+IGV+Q+V P   I  +  +    KRDI + D 
Sbjct: 288  TAVPVAKFSFVSLQEVGD-VAKDAVIDVIGVLQNVGPVQQITSRATSRGFDKRDITIVDQ 346

Query: 791  SNKTVTVSLWNDLATTLGEELLDMVDSAPIVAIKSLKVSDFQGVSVSTVGKSTLVINPEL 970
            +   + V+LW   A          V    I+A K +KV+DFQG S+S +  ST+ ++P++
Sbjct: 347  TGYEMRVTLWGKTAIEFS------VSEESILAFKGVKVNDFQGRSLSMLTSSTMSVDPDI 400

Query: 971  PETEKLRAWYESEGKGTXXXXXXXXXXXXXXXXXXXXYSDRVFLSHITSDPNLGQDKPVF 1150
             E+  L+ WY+ +G+G                      ++R  ++ + ++     + P +
Sbjct: 401  QESHLLKGWYDGQGRGQEFAKHSVISSTLSTTGRS---AERKNIAEVQAEHLGMSETPDY 457

Query: 1151 FSLCANISHIKPDQTMWYRAC--TTCNKKVTEALGSGYWCEGCQKNYEECSLRYIMVIKV 1324
            FSL   I +I+  + + Y AC    CNKKV +  G  + CE C K Y+    RYI+ I V
Sbjct: 458  FSLKGTIVYIR-KKNVSYPACPAADCNKKVFDQ-GGSWRCEKCNKEYDAPQYRYIITIAV 515

Query: 1325 SDPTGEAWLSLFNDQAERIVGCSADNLDRIRKEEGDDMFQLKLKEATWVPHLFRVSVAQN 1504
             D TG+ WL++F+D  + I+  +AD L+ + +E  ++ F   + EA ++P++F+    Q+
Sbjct: 516  GDHTGQLWLNVFDDVGKLIMHKTADELNDL-QENDENAFMNCMAEACYMPYIFQCRAKQD 574

Query: 1505 EYMGEKRQRITVRSESPVDFAAEAR 1579
             + GE R R TV S + +D+  E++
Sbjct: 575  NFKGEMRVRYTVMSINQMDWKEESK 599

>P22336:RFA1_YEAST Replication factor-A protein 1 - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 621

 Score =  244 bits (623), Expect = 1e-63
 Identities = 151/470 (32%), Positives = 245/470 (52%), Gaps = 5/470 (1%)
 Frame = +2

Query: 209  SASQIVSEQRGNAAPAARLAMTRRVHPLISLNPYQGNWVIKVRVTSKGNLRSYRNARGEG 388
            S S + + +R  A        TR +  +  L+PYQ  W IK RV+ KG ++++ N RG+G
Sbjct: 160  SNSNLNANERKFANENPNSQKTRPIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDG 219

Query: 389  HVFNVELTDEDGTQIQATMFNEPAKKFYPVFELGKVYYISKGSLRIANKQFKTVQNDYEM 568
             +FNV   D  G +I+AT FN+ A KF  + + GKVYY+SK  L+ A  QF  + + YE+
Sbjct: 220  KLFNVNFLDTSG-EIRATAFNDFATKFNEILQEGKVYYVSKAKLQPAKPQFTNLTHPYEL 278

Query: 569  TLXXXXXXXXXXGESFIPPVQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKID 748
             L           ES +P   +NF+K+D +         VD++G++Q+++P   +  +  
Sbjct: 279  NLDRDTVIEECFDESNVPKTHFNFIKLDAIQNQEVNSN-VDVLGIIQTINPHFELTSRA- 336

Query: 749  NESIPKRDIVVADDSNKTVTVSLWNDLATTLGEELLDMVDSAPIVAIKSLKVSDFQGVSV 928
             +   +RDI + DDS  +++V LWN  A          +    + AIK ++V+DF G S+
Sbjct: 337  GKKFDRRDITIVDDSGFSISVGLWNQQALDFN------LPEGSVAAIKGVRVTDFGGKSL 390

Query: 929  STVGKSTLVINPELPETEKLRAWYESEGKGTXXXXXXXXXXXXXXXXXXXX--YSDRVFL 1102
            S    STL+ NPE+PE   L+ WY+S+G+                         + R+ +
Sbjct: 391  SMGFSSTLIPNPEIPEAYALKGWYDSKGRNANFITLKQEPGMGGQSAASLTKFIAQRITI 450

Query: 1103 SHITSDPNLGQ-DKPVFFSLCANISHIKPDQTMWYRACTT--CNKKVTEALGSGYWCEGC 1273
            +   ++ NLG+ +K  FFS+ A IS +K D    Y AC+   CNKKV E     + CE C
Sbjct: 451  ARAQAE-NLGRSEKGDFFSVKAAISFLKVDNFA-YPACSNENCNKKVLEQPDGTWRCEKC 508

Query: 1274 QKNYEECSLRYIMVIKVSDPTGEAWLSLFNDQAERIVGCSADNLDRIRKEEGDDMFQLKL 1453
              N    + RYI+ I + D T + WL+LF+DQA++++G  A+ L  + KEE  + F    
Sbjct: 509  DTNNARPNWRYILTISIIDETNQLWLTLFDDQAKQLLGVDANTLMSL-KEEDPNEFTKIT 567

Query: 1454 KEATWVPHLFRVSVAQNEYMGEKRQRITVRSESPVDFAAEARYQLEEIAR 1603
            +      + FR+   ++ Y  + R R TV +   +++ AEA Y  +E+++
Sbjct: 568  QSIQMNEYDFRIRAREDTYNDQSRIRYTVANLHSLNYRAEADYLADELSK 617

>Q6NY74:RFA1_DANRE Replication protein A 70 kDa DNA-binding subunit - Danio rerio|
            (Zebrafish) (Brachydanio rerio)
          Length = 601

 Score =  240 bits (613), Expect = 1e-62
 Identities = 149/450 (33%), Positives = 236/450 (52%), Gaps = 5/450 (1%)
 Frame = +2

Query: 278  RVHPLISLNPYQGNWVIKVRVTSKGNLRSYRNARGEGHVFNVELTDEDGTQIQATMFNEP 457
            +V P+ SLNPYQ  W I+ RVT+K  +R++ N+RG+G +F++EL DE G +I+AT FN  
Sbjct: 170  KVVPIASLNPYQSKWTIRARVTNKSAIRTWSNSRGDGKLFSMELVDESG-EIRATGFNNE 228

Query: 458  AKKFYPVFELGKVYYISKGSLRIANKQFKTVQNDYEMTLXXXXXXXXXXGESFIPPVQYN 637
              KF+ + E GKV+YISKG+L+IANKQF +++NDYEMTL            + +P +Q +
Sbjct: 229  VDKFFSLIEQGKVFYISKGTLKIANKQFSSLKNDYEMTLNGETSIIPCEDSNDVPMLQCD 288

Query: 638  FVKIDMLGPYVGGRE---LVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVT 808
            FV I  L      RE   ++D+IGV ++      I  K ++  + KR+I + D S + + 
Sbjct: 289  FVSIADL----ESREKDTILDVIGVCKNAEDVARIMTK-NSREVSKRNIQLIDMSGRVIQ 343

Query: 809  VSLWNDLATTLGEELLDMVDSAPIVAIKSLKVSDFQGVSVSTVGKSTLVINPELPETEKL 988
            +++W   A T            PI+AIK  ++SDF G S+ST+  ST++INP++PE  KL
Sbjct: 344  LTMWGSDAETFDG------SGQPILAIKGARLSDFGGRSLSTLYSSTVMINPDIPEAYKL 397

Query: 989  RAWYESEGKGTXXXXXXXXXXXXXXXXXXXXYSDRVFLSHITSDPNLGQDKPVFFSLCAN 1168
            R WY+ EG                           V   H+        DK  +FS  A 
Sbjct: 398  RGWYDKEGHALDGQSMTELRGPGGGGNTNWKTLAEVKNEHLGHG-----DKADYFSCIAT 452

Query: 1169 ISHIKPDQTMWYRACTT--CNKKVTEALGSGYWCEGCQKNYEECSLRYIMVIKVSDPTGE 1342
            I +I+ +  + Y+AC +  CNKKV +     + CE C K + +   R ++   ++D    
Sbjct: 453  IVYIRKENCL-YQACPSKDCNKKVVDQQNGMFRCEKCDKEFPDFKYRLMLSANIADFGDN 511

Query: 1343 AWLSLFNDQAERIVGCSADNLDRIRKEEGDDMFQLKLKEATWVPHLFRVSVAQNEYMGEK 1522
             W++ F D AE ++G ++  L ++ K+  +  F    + A +   +FR  V    Y  E 
Sbjct: 512  QWVTCFQDTAETLLGQNSSYLGQL-KDTNEAAFDEVFQHANFNTFVFRNRVKLETYNDES 570

Query: 1523 RQRITVRSESPVDFAAEARYQLEEIARLTS 1612
            R ++TV    PVD    ++  +  I +L +
Sbjct: 571  RIKVTVVDAKPVDHREYSKRLIINIRKLAA 600

>Q24492:RFA1_DROME Replication protein A 70 kDa DNA-binding subunit - Drosophila|
            melanogaster (Fruit fly)
          Length = 603

 Score =  231 bits (590), Expect = 6e-60
 Identities = 147/487 (30%), Positives = 242/487 (49%), Gaps = 12/487 (2%)
 Frame = +2

Query: 185  LKPRHDVKSASQIVSEQRGNAAPAARLAMTRRV-----HPLISLNPYQGNWVIKVRVTSK 349
            L P+  V S S+ ++++  +      + M   +     HP+ SL+PYQ  WVIK RVTSK
Sbjct: 129  LAPKPAVTSNSKPIAKKEPSHNNNNNIVMNSSINSGMTHPISSLSPYQNKWVIKARVTSK 188

Query: 350  GNLRSYRNARGEGHVFNVELTDEDGTQIQATMFNEPAKKFYPVFELGKVYYISKGSLRIA 529
              +R++ NARGEG +F+++L DE G +I+AT F E   KFY + ++  VYYISK  L+ A
Sbjct: 189  SGIRTWSNARGEGKLFSMDLMDESG-EIRATAFKEQCDKFYDLIQVDSVYYISKCQLKPA 247

Query: 530  NKQFKTVQNDYEMTL--XXXXXXXXXXGESFIPPVQYNFVKI-DMLGPYVGGRELVDIIG 700
            NKQ+ ++ N YEMT              +  IP ++YN V I D+ G  +  +  VD IG
Sbjct: 248  NKQYSSLNNAYEMTFSGETVVQLCEDTDDDPIPEIKYNLVPISDVSG--MENKAAVDTIG 305

Query: 701  VVQSVSPTLSIRRKIDNESIPKRDIVVADDSNKTVTVSLWNDLATTLGEELLDMVDSAPI 880
            + + V    S   +  N+   KRDI + D SN  ++++LW D A      +       P+
Sbjct: 306  ICKEVGELQSFVARTTNKEFKKRDITLVDMSNSAISLTLWGDDAVNFDGHV------QPV 359

Query: 881  VAIKSLKVSDFQ-GVSVSTVGKSTLVINPELPETEKLRAWYESEGKGTXXXXXXXXXXXX 1057
            + +K  ++++F  G S+S  G S + INP++PE  KLR W+++ G  +            
Sbjct: 360  ILVKGTRINEFNGGKSLSLGGGSIMKINPDIPEAHKLRGWFDNGGGDSVANMVSARTGGG 419

Query: 1058 XXXXXXXXYSDRVFLSHITSDPNLGQ-DKPVFFSLCANISHIKPDQTMWYRAC--TTCNK 1228
                      D           NLG  DKP +F  C  + HI   +  +YRAC  + CNK
Sbjct: 420  SFSTEWMTLKD-------ARARNLGSGDKPDYFQ-CKAVVHIVKQENAFYRACPQSDCNK 471

Query: 1229 KVTEALGSGYWCEGCQKNYEECSLRYIMVIKVSDPTGEAWLSLFNDQAERIVGCSADNLD 1408
            KV +     + CE C   +     R ++ + + D T   W+S FN+  E+++G ++  + 
Sbjct: 472  KVVDEGNDQFRCEKCNALFPNFKYRLLINMSIGDWTSNRWVSSFNEVGEQLLGHTSQEVG 531

Query: 1409 RIRKEEGDDMFQLKLKEATWVPHLFRVSVAQNEYMGEKRQRITVRSESPVDFAAEARYQL 1588
               + +     Q+      +  H+F++      Y    R ++TV+S +P++     ++ L
Sbjct: 532  EALENDPAKAEQI-FSALNFTSHIFKLRCKNEVYGDMTRNKLTVQSVAPINHKEYNKHLL 590

Query: 1589 EEIARLT 1609
            +E+  LT
Sbjct: 591  KELQELT 597

>Q23696:RFA1_CRIFA Replication factor A 51 kDa subunit - Crithidia fasciculata|
          Length = 467

 Score =  191 bits (486), Expect = 7e-48
 Identities = 138/433 (31%), Positives = 211/433 (48%), Gaps = 12/433 (2%)
 Frame = +2

Query: 272  TRRVHPLISLNPYQGN-WVIKVRVTSKGNLRSYRNARGEGHVFNVELTDEDGTQIQATMF 448
            + ++ P+ SL P+ G  W I+ RV  K ++R++     +G +F+  L DE    I+AT+F
Sbjct: 6    SHQIQPIDSLTPFLGGKWWIRARVADKSDIRTWNKPTSQGKLFSFTLIDESAA-IRATVF 64

Query: 449  NEPAKKFYPVFELGKVYYISKGSLRIANKQFKTVQNDYEMTLXXXXXXXXXXGES---FI 619
            N+    F P+   G+VYY S G ++ AN++F  V NDYE+T            +S    +
Sbjct: 65   NDAVDTFEPLVVNGQVYYFSGGQVKNANRRFSNVNNDYELTFDRASEVILARQDSSAAAL 124

Query: 620  PPVQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSIRRKIDNESIPKRDIVVADDSNK 799
            P  +YNFV I++L     G  LVD++GVV  V    SI +K     + KR++ + D S  
Sbjct: 125  PMQRYNFVPIELLKQREVG-SLVDVLGVVLKVDEISSITQKSTGRELIKRNVKIGDMS-A 182

Query: 800  TVTVSLWNDLATTLGEELLDMVDSAPIVAIKSLKVSDFQGVSVSTVGKSTLVINP-ELPE 976
             V V+ WND A      +        +VA++ LKV  F GV++S+  ++ + +NP +LP+
Sbjct: 183  AVEVTFWNDEAKAWNYPV------GTVVALRQLKVGSFDGVTLSSTYQTKIDVNPADLPD 236

Query: 977  TEKLRAWYESEGKGTXXXXXXXXXXXXXXXXXXXXYSDRVFLSHITSDPNLGQDKPVFFS 1156
             +KL  WY S G G                        R +L  I S+      KP +  
Sbjct: 237  VKKLATWYVSTG-GANVVSLSSQGLGAGGGGGGEGNRGRKYLDEIQSEGIGRGAKPEYVD 295

Query: 1157 LCANISHIKPDQTMWYRACTTCNKKVTE--ALGSGYWCEGCQKNYEECSLRYIMVIKVSD 1330
            +     + K D   WY AC TCNKKVTE  A G  + CE C       + RY++ I+V+D
Sbjct: 296  VRCVPIYFKQD-AQWYDACPTCNKKVTEEGAQGDRFRCEKCDATVVP-TQRYLVSIQVTD 353

Query: 1331 PTGEAWLSLFNDQAERIVGCSADNLDRIRKEEGDDMFQLKLKEATW-VPHLFRVSVAQ-- 1501
               + WL+LFN+      G  A  L R  +E  D ++  KL +A    P + R+ V +  
Sbjct: 354  NVSQVWLTLFNEAGVEFFGMEASELKRRAQE--DPLYIAKLAQARMNRPVVMRLRVKEET 411

Query: 1502 --NEYMGEKRQRI 1534
              N   GE+  R+
Sbjct: 412  NANAMTGEESDRL 424

>Q19537:RFA1_CAEEL Probable replication factor A 73 kDa subunit - Caenorhabditis elegans|
          Length = 655

 Score =  160 bits (406), Expect = 1e-38
 Identities = 126/454 (27%), Positives = 207/454 (45%), Gaps = 9/454 (1%)
 Frame = +2

Query: 206  KSASQIVSEQRGNAAPAARLAMT--RRVHPLISLNPYQGNWVIKVRVTSKGNLRSY--RN 373
            ++A+   +  R    PA R A    R V P+  + PY  N+ I   V+ K  +R++  +N
Sbjct: 196  RAAAPEATRARAVPPPARRTASNTERGVMPIAMVTPYVSNFKIHGMVSRKEEIRTFPAKN 255

Query: 374  ARGEGHVFNVELTDEDGTQIQATMFNEPAKKFYPVFELGKVYYISKGSLRIANKQFKTVQ 553
             +    VFN E+TD +G  I+ T FNE A+  Y        YY+S GS++ ANK+F    
Sbjct: 256  TK----VFNFEITDSNGDTIRCTAFNEVAESLYTTITENLSYYLSGGSVKQANKKFNNTG 311

Query: 554  NDYEMTLXXXXXXXXXXGESFIPPVQYNFVKIDMLGPYVGGRELVDIIGVVQSVSPTLSI 733
            +DYE+TL               P +    VK+  +  Y G  +L+D++ VV+ + P  + 
Sbjct: 312  HDYEITLRSDSIIEAGGELLAAPKLILKRVKLGEIAGYAG--QLIDVLVVVEKMDPEATE 369

Query: 734  RRKIDNESIPKRDIVVADDSNKTVTVSLWNDLATTLGEELLDMVDS--APIVAIKSLKVS 907
                  +S+ KR++ + D+S   V ++LW D AT        +VD     ++A K +   
Sbjct: 370  FTSKAGKSLIKREMELIDESGALVRLTLWGDEATKA------LVDDYVQKVIAFKGVIPR 423

Query: 908  DFQGVSVSTVGKSTLVIN-PELPETEKLRAWYESEGKGTXXXXXXXXXXXXXXXXXXXXY 1084
            +F G      G +T +I+ PE+    +L  WY +    T                     
Sbjct: 424  EFNGGFSLGTGSATRIISVPEIAGVSELYDWYANVKPTTEVKMMSQAAGGSNE------- 476

Query: 1085 SDRVFLSHITSDPNLGQDKPVFFSLCANISHIKPDQTMWYRACTT--CNKKVTEALGSGY 1258
            + R              DK  + ++ A I+ + P   + YR C +  C KK+    G  Y
Sbjct: 477  APRTIAGLQEMQFGKDSDKGDYATVKAMITRVNPTNAL-YRGCASEGCQKKLVGENGD-Y 534

Query: 1259 WCEGCQKNYEECSLRYIMVIKVSDPTGEAWLSLFNDQAERIVGCSADNLDRIRKEEGDDM 1438
             CE C KN  +    Y+M  ++SD TG+ +++ F D A +IVG SA  L  +  +E  D 
Sbjct: 535  RCEKCNKNMNKFKWLYMMQFELSDETGQVYVTAFGDSAAKIVGKSAAELGELH-DESPDE 593

Query: 1439 FQLKLKEATWVPHLFRVSVAQNEYMGEKRQRITV 1540
            +    +   +VP ++R+    + Y  E RQ++TV
Sbjct: 594  YNAIFERLQFVPKMWRLRCKMDSYNEEVRQKMTV 627

>P38086:RDH54_YEAST DNA repair and recombination protein RDH54 - Saccharomyces|
           cerevisiae (Baker's yeast)
          Length = 924

 Score = 36.2 bits (82), Expect = 0.52
 Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
 Frame = +2

Query: 185 LKPRHDVKSASQIVSEQRGNAAPAARLAMTRRVHPLISLNPYQGNWVIKV-RVTSKGNLR 361
           LK   +++SA + +S+  GN +P      T     + S     G + + + ++ S   ++
Sbjct: 144 LKENAEIRSAKEALSQNMGNPSPPT----TSTTETVPSTKNDGGKYQMPLSQLFSLNTVK 199

Query: 362 SYRNARGEGHVFNVELTDEDGTQIQATMFNEPAKKFYPVFELGKV 496
            +++   +        T+E  T +  T  N  AKK+YPVF++ K+
Sbjct: 200 RFKSVTKQ--------TNEHMTTVPKTSQNSKAKKYYPVFDVNKI 236

>Q2S906:RPOC_HAHCH DNA-directed RNA polymerase beta' chain - Hahella chejuensis|
           (strain KCTC 2396)
          Length = 1396

 Score = 35.4 bits (80), Expect = 0.89
 Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
 Frame = +2

Query: 653 MLGPYVGGRELVDIIGVVQSVSPTLSIRR-----KIDNESIPK---RDIVVADDSNKTVT 808
           +LG Y   RE ++  G     S    ++R     K+D ++  K   RD+V+ +D NKTVT
Sbjct: 507 VLGLYFMTRERINAKGEGMVFSDIKEVQRAYGAKKVDLQAKVKVRIRDVVIDEDRNKTVT 566

Query: 809 VSLWNDLATTLGEELL 856
           VS+   L TT+G  LL
Sbjct: 567 VSV---LDTTVGRALL 579

>Q07065:CKAP4_HUMAN Cytoskeleton-associated protein 4 - Homo sapiens (Human)|
          Length = 602

 Score = 35.0 bits (79), Expect = 1.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = +2

Query: 77  PVRQTPEPRPRPHPQLHMQRHPK 145
           P  Q P P P PHPQ H Q+HP+
Sbjct: 38  PAPQQPPPPPAPHPQQHPQQHPQ 60

>Q9RBJ0:ISPH_ACIAD 4-hydroxy-3-methylbut-2-enyl diphosphate reductase - Acinetobacter|
           sp. (strain ADP1)
          Length = 316

 Score = 34.7 bits (78), Expect = 1.5
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
 Frame = +2

Query: 158 DGASPDSIMLKPRHDVKSASQIVSEQRGNAAPAARLAMTRRVHPLISLNPYQGNWVIKV- 334
           D    DSI++   H V  A Q  +E RG     A   +  +VH  ++    +G   I + 
Sbjct: 61  DQVPDDSIVIFSAHGVSKAVQQEAEHRGLKVFDATCPLVTKVHIEVTKYAREGTEAILIG 120

Query: 335 ---RVTSKGNLRSYRNARGEGHVFNVELTDEDGTQIQATMFNEPAK 463
                  +G +  Y  ++G GH++ V    ED   ++A   N P K
Sbjct: 121 HEGHPEVEGTMGQYDKSKG-GHIYLV----EDEADVEALAVNHPEK 161

>P23246:SFPQ_HUMAN Splicing factor, proline- and glutamine-rich - Homo sapiens (Human)|
          Length = 707

 Score = 33.5 bits (75), Expect = 3.4
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 77  PVRQTPEPRPRPHPQLHMQRHPK*VGQDGASP 172
           P +Q P  +P PHPQ H Q+ P    QD + P
Sbjct: 78  PPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKP 109

>Q04884:OPAH_NEIGO Opacity protein opA60 precursor - Neisseria gonorrhoeae|
          Length = 238

 Score = 33.5 bits (75), Expect = 3.4
 Identities = 21/73 (28%), Positives = 32/73 (43%)
 Frame = +2

Query: 272 TRRVHPLISLNPYQGNWVIKVRVTSKGNLRSYRNARGEGHVFNVELTDEDGTQIQATMFN 451
           TR VHP +S+    G W I          R + N +   ++ NV +  E+G +I     N
Sbjct: 49  TRSVHPRVSVGYDFGGWRI---AADYARYRKWNNNKYSVNIENVRIRKENGIRIDRKTEN 105

Query: 452 EPAKKFYPVFELG 490
           +    F+ V  LG
Sbjct: 106 QENGTFHAVSSLG 118

>Q9Z0U5:ADO_RAT Aldehyde oxidase - Rattus norvegicus (Rat)|
          Length = 1333

 Score = 33.5 bits (75), Expect = 3.4
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 24/120 (20%)
 Frame = +2

Query: 209  SASQIVSEQRGNAAPAARLAMTRRVHPLISLNPYQGNWV--------IKVRVTSKGNLRS 364
            S   +V++  G A   A   + +R+ P+IS NP QG W           V +++ G  R 
Sbjct: 1081 SGGSVVADLNGLAVKDACQTLLKRLEPIISKNP-QGTWKDWAQTAFDQSVSLSAVGYFRG 1139

Query: 365  YRN----ARGEGHVF------------NVELTDEDGTQIQATMFNEPAKKFYPVFELGKV 496
            Y +     +GEGH F             ++    D   I+  +  +      P  ++G+V
Sbjct: 1140 YESNINWEKGEGHPFEYFVYGAACSEVEIDCLTGDHKNIRTDIVMDVGHSINPALDIGQV 1199

>P17600:SYN1_HUMAN Synapsin-1 - Homo sapiens (Human)|
          Length = 705

 Score = 32.7 bits (73), Expect = 5.8
 Identities = 21/61 (34%), Positives = 24/61 (39%), Gaps = 2/61 (3%)
 Frame = +2

Query: 29  GGEGQGDPLLPLRVGGPVRQTPE--PRPRPHPQLHMQRHPK*VGQDGASPDSIMLKPRHD 202
           G + QG P  P    GP RQ  +  P PR  P    Q  P   G  G     +  KP  D
Sbjct: 584 GQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRPKPQLAQKPSQD 643

Query: 203 V 205
           V
Sbjct: 644 V 644

>Q0VBL6:HIF3A_MOUSE Hypoxia-inducible factor 3 alpha - Mus musculus (Mouse)|
          Length = 662

 Score = 32.7 bits (73), Expect = 5.8
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = -2

Query: 1101 RKTLSEYIDLKPPALDAPIPAPTDAKEVPLPSDSYQALSFSVSGNSGLITSVLLPTVETD 922
            R+ ++  +D  PPA     P  T   + PLP+D    L+  +     L T+    TVETD
Sbjct: 411  RRLMAPILDGPPPAATPSTPQATRRPQSPLPADLPDKLAVGLENAHRLSTAQKNKTVETD 470

>P30260:CDC27_HUMAN Cell division cycle protein 27 homolog - Homo sapiens (Human)|
          Length = 824

 Score = 32.7 bits (73), Expect = 5.8
 Identities = 29/99 (29%), Positives = 42/99 (42%)
 Frame = -2

Query: 1068 PPALDAPIPAPTDAKEVPLPSDSYQALSFSVSGNSGLITSVLLPTVETDTP*KSDTFRLL 889
            PP +D P       K V     +     FS SGNS  +T +L  T ++  P  S T ++L
Sbjct: 305  PPVIDVPSTGAPSKKSVARIGQTGTKSVFSQSGNSREVTPILAQT-QSSGPQTSTTPQVL 363

Query: 888  IATIGAESTMSNSSSPRVVARSFQRETVTVLFESSATTM 772
              TI    T   ++ PR  +R F  ++ T    S    M
Sbjct: 364  SPTI----TSPPNALPRRSSRLFTSDSSTTKENSKKLKM 398

>O54754:ADO_MOUSE Aldehyde oxidase - Mus musculus (Mouse)|
          Length = 1333

 Score = 32.7 bits (73), Expect = 5.8
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 12/75 (16%)
 Frame = +2

Query: 209  SASQIVSEQRGNAAPAARLAMTRRVHPLISLNPYQGNWV--------IKVRVTSKGNLRS 364
            S   +V++  G A   A   + +R+ P+IS NP QG W           + +++ G  R 
Sbjct: 1081 SGGSVVADLNGLAVKDACQTLLKRLEPIISKNP-QGTWKDWAQTAFDQSISLSAVGYFRG 1139

Query: 365  YRN----ARGEGHVF 397
            Y +     +GEGH F
Sbjct: 1140 YESNIDWEKGEGHPF 1154

>Q9NWS9:ZN446_HUMAN Zinc finger protein 446 - Homo sapiens (Human)|
          Length = 450

 Score = 32.3 bits (72), Expect = 7.5
 Identities = 25/77 (32%), Positives = 28/77 (36%)
 Frame = -3

Query: 1241 PRSPSCCRWCKRGTTWSGQA*CGLCWHTG*RKQAYPGPS*GHL*CETEKLCQSTLISNHQ 1062
            PR P  C  C RG  W          HT       PG + G     TEK  Q  +   H 
Sbjct: 328  PRKPYTCEQCGRGFDWKSVFVIHHRTHTSGPGVQSPGLATGE---STEKPPQGEVAFPH- 383

Query: 1061 RWMHPFQHQLMPRKYPC 1011
               HP +    PR YPC
Sbjct: 384  ---HPRRSLTGPRSYPC 397

>Q108T9:CTTB2_LOXAF Cortactin-binding protein 2 - Loxodonta africana (African elephant)|
          Length = 1661

 Score = 32.3 bits (72), Expect = 7.5
 Identities = 21/77 (27%), Positives = 34/77 (44%)
 Frame = +2

Query: 5   LQFHG*RRGGEGQGDPLLPLRVGGPVRQTPEPRPRPHPQLHMQRHPK*VGQDGASPDSIM 184
           L+  G  R   G   P+ P + G  + QTP P   PHPQL +          GA  D  +
Sbjct: 528 LKTSGVARVDRGNPPPIPPKKPG--LSQTPSP---PHPQLKVIMDSSRASNAGAKVDKTV 582

Query: 185 LKPRHDVKSASQIVSEQ 235
             P   +   +++++E+
Sbjct: 583 ASPPTSLPQGNRVINEE 599

>O13166:TLE2_DANRE Groucho 2 protein - Danio rerio (Zebrafish) (Brachydanio rerio)|
          Length = 761

 Score = 32.0 bits (71), Expect = 9.8
 Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 6/95 (6%)
 Frame = +2

Query: 47  DPLLPLRVGGPVRQTPE---PRPRPHPQLHMQRHPK*VGQDGASPDSIMLKPRHDVKSAS 217
           DP  P   G P    PE    +PRP  +    R P  V   G++P S    P H+ KS++
Sbjct: 262 DPATPR--GSPAHSPPENGIDKPRPAKK-DTPRRPASVASSGSTPSSKTKPPEHNDKSST 318

Query: 218 QIVSEQR---GNAAPAARLAMTRRVHPLISLNPYQ 313
             +  +     N AP    + T  + P++   P +
Sbjct: 319 PGLKSKAPTPRNDAPTPGTSTTPGLRPILGKPPME 353

>Q9CR92:CCD96_MOUSE Coiled-coil domain-containing protein 96 - Mus musculus (Mouse)|
          Length = 584

 Score = 32.0 bits (71), Expect = 9.8
 Identities = 27/83 (32%), Positives = 33/83 (39%)
 Frame = +2

Query: 59  PLRVGGPVRQTPEPRPRPHPQLHMQRHPK*VGQDGASPDSIMLKPRHDVKSASQIVSEQR 238
           PL    PV Q PEP+P P P     R P+   +     DS   K    +  A   V E  
Sbjct: 31  PLTPANPVEQEPEPKPEPEPT--QGREPE--SETQPVSDSSKAKDSEGIDYAHVEVPESP 86

Query: 239 GNAAPAARLAMTRRVHPLISLNP 307
           G AA  A  A++R    L    P
Sbjct: 87  G-AAETAGEAVSREPESLPQTQP 108

>Q9NPZ5:B3GA2_HUMAN Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2|
           - Homo sapiens (Human)
          Length = 323

 Score = 32.0 bits (71), Expect = 9.8
 Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
 Frame = +2

Query: 38  GQGDPLLPLRVGGPV-----RQTPEPRPRPHPQL 124
           G+G   LPLR GGP      R    P+P+P PQL
Sbjct: 46  GRGGARLPLRRGGPAHGTQKRNQSRPQPQPEPQL 79


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 362,163,278
Number of extensions: 8399254
Number of successful extensions: 26882
Number of sequences better than 10.0: 28
Number of HSP's gapped: 26479
Number of HSP's successfully gapped: 37
Length of query: 664
Length of database: 100,686,439
Length adjustment: 120
Effective length of query: 544
Effective length of database: 67,771,039
Effective search space: 36867445216
Effective search space used: 36867445216
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)