ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf52d16 |
|---|---|
| Clone Library Name | barley_pub |
>Q5YP70:HEM3_NOCFA Porphobilinogen deaminase - Nocardia farcinica| Length = 346 Score = 33.1 bits (74), Expect = 0.31 Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Frame = +3 Query: 27 AMGRRQSLPWTVLIRRPGGMHVLLCHEDGGAVETVGVAASILAG--DFTVHGLTLRIPSP 200 A GR L V+++ PG M + G V T + + AG D VH +P Sbjct: 33 AAGRPAEL---VVVKTPGDMSSDPVQKIGVGVFTSALRDELAAGTIDLAVHSYKDLPTAP 89 Query: 201 DDRLVPAVLPP--DARDSLGASP--LLGCLP 281 D R V A +PP D RD+L A +LG LP Sbjct: 90 DPRFVIAAIPPREDPRDALVARDGLVLGELP 120
>Q8BNJ2:ATS4_MOUSE ADAMTS-4 precursor - Mus musculus (Mouse)| Length = 833 Score = 31.6 bits (70), Expect = 0.89 Identities = 12/50 (24%), Positives = 28/50 (56%) Frame = +3 Query: 78 GGMHVLLCHEDGGAVETVGVAASILAGDFTVHGLTLRIPSPDDRLVPAVL 227 G H+L+ + G ++++ +A + G + ++G +PSP D ++P + Sbjct: 704 GATHILVRQQGGSGLKSIYLALKLSDGSYALNGEYTLMPSPTDVVLPGAV 753
>Q99856:ARI3A_HUMAN AT-rich interactive domain-containing protein 3A - Homo sapiens| (Human) Length = 593 Score = 31.6 bits (70), Expect = 0.89 Identities = 25/88 (28%), Positives = 37/88 (42%) Frame = +3 Query: 24 RAMGRRQSLPWTVLIRRPGGMHVLLCHEDGGAVETVGVAASILAGDFTVHGLTLRIPSPD 203 R GRRQS ++ PGG H +L V ++G+AAS T +I + Sbjct: 346 RREGRRQSFGGSLFAYSPGGAHGML-SSPKLPVSSLGLAASTNGSSITP---APKIKKEE 401 Query: 204 DRLVPAVLPPDARDSLGASPLLGCLPVA 287 D +P +P SL P++ A Sbjct: 402 DSAIPITVPGRLPVSLAGHPVVAAQAAA 429
>P19212:NIT2_NEUCR Nitrogen catabolic enzyme regulatory protein - Neurospora crassa| Length = 1036 Score = 31.2 bits (69), Expect = 1.2 Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 3/83 (3%) Frame = -1 Query: 307 PTQHKKKATGRQPNSGEAPRLSLASGGNTAGTRRSSGDGILSVNP*TV--KSPARIEAAT 134 P Q + +A+ N E+P ASGGNTAG+ +S G V KS I +A Sbjct: 841 PAQQQVRASS--VNESESPASGPASGGNTAGSTPTSYHGSTGSTSGAVGGKSVIPIASAP 898 Query: 133 PTVSTAP-PSSWQRRTCIPPGRR 68 P + P S RR I R+ Sbjct: 899 PKSAPGPGAGSMSRRDTISSKRQ 921
>Q6NZ09:ADRM1_DANRE Protein ADRM1 - Danio rerio (Zebrafish) (Brachydanio rerio)| Length = 410 Score = 30.4 bits (67), Expect = 2.0 Identities = 22/66 (33%), Positives = 31/66 (46%) Frame = -1 Query: 295 KKKATGRQPNSGEAPRLSLASGGNTAGTRRSSGDGILSVNP*TVKSPARIEAATPTVSTA 116 + ++ P+SG A RLS T T ++ G +V P T PA A TP++ Sbjct: 205 RSQSAAATPSSGSAARLSSTQAPTTPVTPAATSSGSPTVTPTT---PA---AQTPSLPAG 258 Query: 115 PPSSWQ 98 P SS Q Sbjct: 259 PASSTQ 264
>P58742:AAAS_MOUSE Aladin - Mus musculus (Mouse)| Length = 546 Score = 30.0 bits (66), Expect = 2.6 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = -3 Query: 311 LANTTQEESDGETT*QRRGAKAISRIWWQYGRDETVVRRRNPQRQSMN 168 L+ TT + DGE +R G +A S +W G V+ + NPQ Q N Sbjct: 381 LSETTIQTPDGE---ERLGGEAHSMVWDPSGERLAVLMKGNPQVQDGN 425
>Q9NPJ4:PNRC2_HUMAN Proline-rich nuclear receptor coactivator 2 - Homo sapiens (Human)| Length = 139 Score = 30.0 bits (66), Expect = 2.7 Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 9/93 (9%) Frame = -1 Query: 298 HKKKATGRQPNSGEAPRLSLASGG-NTAGTRRSSGDGILSVNP*TVKSPAR--------I 146 HKKK G NS A ++ +GG N S + LS KS A Sbjct: 40 HKKKERGHGYNSSAAAWQAMQNGGKNKNFPNNQSWNSSLSGPRLLFKSQANQNYAGAKFS 99 Query: 145 EAATPTVSTAPPSSWQRRTCIPPGRRINTVQGK 47 E +P+V PPS W + P + I T Q K Sbjct: 100 EPPSPSVLPKPPSHWVPVSFNPSDKEIMTFQLK 132
>O62675:IL16_MACMU Interleukin-16 precursor - Macaca mulatta (Rhesus macaque)| Length = 630 Score = 30.0 bits (66), Expect = 2.7 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -1 Query: 274 QPNSGEAPR-LSLASGGNTAGTR-RSSGDGILSVNP*TVK---SPARIEAATPTVSTAPP 110 QP+SGEA + L GG +G R + ++ P V SPA EA P VS +PP Sbjct: 163 QPSSGEAAKPLGKHEGGRFSGLLGRGAAPTLVPQQPEQVLPSGSPAATEARDPGVSESPP 222 Query: 109 SSWQ-RRTCIPPG 74 Q + +P G Sbjct: 223 PGLQPNQKTLPTG 235
>O62676:IL16_MACFA Interleukin-16 precursor - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 630 Score = 30.0 bits (66), Expect = 2.7 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -1 Query: 274 QPNSGEAPR-LSLASGGNTAGTR-RSSGDGILSVNP*TVK---SPARIEAATPTVSTAPP 110 QP+SGEA + L GG +G R + ++ P V SPA EA P VS +PP Sbjct: 163 QPSSGEAAKPLGKHEGGRFSGLLGRGAAPTLVPQQPEQVLPSGSPAATEARDPGVSESPP 222 Query: 109 SSWQ-RRTCIPPG 74 Q + +P G Sbjct: 223 PGLQPNQKTLPTG 235
>O62674:IL16_CERAE Interleukin-16 precursor - Cercopithecus aethiops (Green monkey)| (Grivet) Length = 631 Score = 30.0 bits (66), Expect = 2.7 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -1 Query: 274 QPNSGEAPR-LSLASGGNTAGTR-RSSGDGILSVNP*TVK---SPARIEAATPTVSTAPP 110 QP+SGEA + L GG +G R + ++ P V SPA EA P VS +PP Sbjct: 164 QPSSGEAAKPLGKHEGGRFSGLLGRGAAPTLVPQQPEQVLPSGSPAATEARDPGVSESPP 223 Query: 109 SSWQ-RRTCIPPG 74 Q + +P G Sbjct: 224 PGLQPNQKTLPTG 236
>Q2RHN8:SYFB_MOOTA Phenylalanyl-tRNA synthetase beta chain - Moorella thermoacetica| (strain ATCC 39073) Length = 803 Score = 29.6 bits (65), Expect = 3.4 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +3 Query: 174 GLTLRIPSPDDRLVPAVLPPDARDSLGASPLLGCLPVAFFL 296 GL + + SP+DR LPPDA A+ +LG V L Sbjct: 124 GLDVSLVSPEDREGIITLPPDASPGADAAEVLGLKDVVLVL 164
>Q9TT93:ATS4_BOVIN ADAMTS-4 precursor - Bos taurus (Bovine)| Length = 839 Score = 29.6 bits (65), Expect = 3.4 Identities = 13/50 (26%), Positives = 27/50 (54%) Frame = +3 Query: 78 GGMHVLLCHEDGGAVETVGVAASILAGDFTVHGLTLRIPSPDDRLVPAVL 227 G H+L+ + +V ++ +A + G + ++G IPSP D ++P + Sbjct: 708 GATHILVRQQGSPSVRSLYLALKLPDGSYALNGEYTLIPSPTDVVLPGAV 757
>Q9CR73:PNRC2_MOUSE Proline-rich nuclear receptor coactivator 2 - Mus musculus (Mouse)| Length = 140 Score = 29.6 bits (65), Expect = 3.5 Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 9/93 (9%) Frame = -1 Query: 298 HKKKATGRQPNSGEAPRLSLASGGNTAG-TRRSSGDGILSVNP*TVKSPAR--------I 146 HKKK G N A ++ +GG T + S+ + LS KS A Sbjct: 41 HKKKERGHGYNPAAAAWQAMQNGGKTKSLSNNSNWNAGLSSPSLLFKSQASQNYAGAKFS 100 Query: 145 EAATPTVSTAPPSSWQRRTCIPPGRRINTVQGK 47 E +P+V PPS W + P + T Q K Sbjct: 101 EPPSPSVLPKPPSHWVHVSLNPSDKETMTFQLK 133
>Q58437:Y1031_METJA Uncharacterized transporter MJ1031 - Methanococcus jannaschii| Length = 308 Score = 29.3 bits (64), Expect = 4.4 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 276 LPVAFFLCCVGQNALGYKRADNV*RVKEEK 365 LPV FLCC+ L Y ++ ++K+EK Sbjct: 66 LPVVIFLCCLFVGILAYLLGKHIFKLKDEK 95
>Q08642:PADI2_MOUSE Protein-arginine deiminase type-2 - Mus musculus (Mouse)| Length = 673 Score = 29.3 bits (64), Expect = 4.4 Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 3/103 (2%) Frame = +3 Query: 96 LCHEDGGAVETVGVAASILAGDFTVHGLTLRIPSPDD---RLVPAVLPPDARDSLGASPL 266 LC D V + S+L ++ G+ L D R+ P ++ P+ Sbjct: 263 LCFPDESFSGLVSIHVSLL--EYMAEGIPLTPIFTDTVMFRIAPWIMTPNILP------- 313 Query: 267 LGCLPVAFFLCCVGQNALGYKRADNV*RVKEEKENN*INSCFQ 395 PV+ F+CC+ N L K N+ EK N + CFQ Sbjct: 314 ----PVSVFVCCMKDNYLFLKEVKNL----VEKTNCELKVCFQ 348
>Q9H972:CN093_HUMAN Uncharacterized protein C14orf93 precursor - Homo sapiens (Human)| Length = 538 Score = 29.3 bits (64), Expect = 4.4 Identities = 15/80 (18%), Positives = 34/80 (42%) Frame = -3 Query: 266 QRRGAKAISRIWWQYGRDETVVRRRNPQRQSMNGKIPGKDRGSNSDSLNSPSIFMAKKNM 87 ++ K SR + + +++R P+ Q + + + DSLN P +++A+ Sbjct: 387 EKEEKKLRSRRYRLFANRSSIMRHFGPEDQRLWNDVTEELMSDEEDSLNEPGVWVARPPR 446 Query: 86 HSSRAAYQYCPRQTLTATHG 27 ++ + C + HG Sbjct: 447 FRAQRLTELCYHLDANSKHG 466
>Q9BE18:MAGE1_MACFA Melanoma-associated antigen E1 - Macaca fascicularis (Crab eating| macaque) (Cynomolgus monkey) Length = 957 Score = 29.3 bits (64), Expect = 4.5 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 8/85 (9%) Frame = -1 Query: 307 PTQHKKKATGRQPNSGEAPRLSL---ASGGNTAGTRRSSGDGILSVNP*TV-----KSPA 152 PT + +T QP +GE P S+ GG + + G+G+ + P T S Sbjct: 286 PTATEGLSTSVQPTAGEGPSTSVPPTPCGGLSTSVPPTPGEGLSTSVPPTATEGLSTSVP 345 Query: 151 RIEAATPTVSTAPPSSWQRRTCIPP 77 P+ S P R T +PP Sbjct: 346 PTPGEGPSTSVLPTPGEGRSTSVPP 370
>O62666:IL16_PANTR Interleukin-16 precursor - Pan troglodytes (Chimpanzee)| Length = 631 Score = 29.3 bits (64), Expect = 4.5 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -1 Query: 274 QPNSGEAPR-LSLASGGNTAGTR-RSSGDGILSVNP*TVKS---PARIEAATPTVSTAPP 110 QP+SGEA + L G +G R + ++ P V S PA EA P VS +PP Sbjct: 164 QPSSGEAAKPLGKHEEGRFSGLLGRGAAPTLVPQQPEQVLSSGSPAASEARDPGVSESPP 223 Query: 109 SSWQ-RRTCIPPG 74 Q + +PPG Sbjct: 224 PGRQPNQKTLPPG 236
>Q14005:IL16_HUMAN Interleukin-16 precursor - Homo sapiens (Human)| Length = 631 Score = 29.3 bits (64), Expect = 4.5 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -1 Query: 274 QPNSGEAPR-LSLASGGNTAGTR-RSSGDGILSVNP*TVKS---PARIEAATPTVSTAPP 110 QP+SGEA + L G +G R + ++ P V S PA EA P VS +PP Sbjct: 164 QPSSGEAAKPLGKHEEGRFSGLLGRGAAPTLVPQQPEQVLSSGSPAASEARDPGVSESPP 223 Query: 109 SSWQ-RRTCIPPG 74 Q + +PPG Sbjct: 224 PGRQPNQKTLPPG 236
>O15265:ATX7_HUMAN Ataxin-7 - Homo sapiens (Human)| Length = 892 Score = 29.3 bits (64), Expect = 4.5 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -1 Query: 253 PRLSLASGGNTAGTRRSSGDGILSVN 176 P LS + GG+ +G+ RSS G+LS + Sbjct: 190 PSLSKSKGGSASGSNRSSSGGVLSAS 215
>Q0JMV4:AMYC1_ORYSJ Alpha-amylase isozyme C - Oryza sativa subsp. japonica (Rice)| Length = 348 Score = 29.3 bits (64), Expect = 4.5 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Frame = -1 Query: 322 PRAFWPTQHKKKATGRQPNSGEAPRLSLASGGNTAGTRRSSGDGILSVNP*TVKSPARIE 143 PR +H+K R+ ++ S +S + G+R +S Sbjct: 143 PRRPLRRRHRKPGHRRRTSTTSTSASSGSSSAGSTGSRWTS------------------- 183 Query: 142 AATPTVSTAP---PSSWQRRTCIPPGR 71 A+T ST+P P +WQR T +PP R Sbjct: 184 ASTRGASTSPRATPPTWQRSTSMPPSR 210
>A2WPU3:AMYC1_ORYSI Alpha-amylase isozyme C - Oryza sativa subsp. indica (Rice)| Length = 348 Score = 29.3 bits (64), Expect = 4.5 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 3/87 (3%) Frame = -1 Query: 322 PRAFWPTQHKKKATGRQPNSGEAPRLSLASGGNTAGTRRSSGDGILSVNP*TVKSPARIE 143 PR +H+K R+ ++ S +S + G+R +S Sbjct: 143 PRRPLRRRHRKPGHRRRTSTTSTSASSGSSSAGSTGSRWTS------------------- 183 Query: 142 AATPTVSTAP---PSSWQRRTCIPPGR 71 A+T ST+P P +WQR T +PP R Sbjct: 184 ASTRGASTSPRATPPTWQRSTSMPPSR 210
>O97741:SCNNA_RABIT Amiloride-sensitive sodium channel subunit alpha - Oryctolagus| cuniculus (Rabbit) Length = 640 Score = 28.9 bits (63), Expect = 5.8 Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Frame = +3 Query: 111 GGAVETVGVAASILAGDFTVHGLTLRIPSPDDRLVPAV-LPPDARDSLGASPLLGCLPVA 287 GGA E S L F H + +P P L P++ PP A +LG CL + Sbjct: 577 GGAREVASSPVSALPSRFCPHPTSPSVPQPGPTLPPSLTAPPPAYATLGP-----CLSQS 631 Query: 288 FFLCCVGQ 311 C G+ Sbjct: 632 GSACAPGE 639
>Q9Y2J8:PADI2_HUMAN Protein-arginine deiminase type-2 - Homo sapiens (Human)| Length = 665 Score = 28.9 bits (63), Expect = 5.8 Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 3/103 (2%) Frame = +3 Query: 96 LCHEDGGAVETVGVAASILAGDFTVHGLTLRIPSPDD---RLVPAVLPPDARDSLGASPL 266 LC D G V + S+L ++ + L D R+ P ++ P+ Sbjct: 255 LCFPDEGFSGLVSIHVSLL--EYMAQDIPLTPIFTDTVIFRIAPWIMTPNILP------- 305 Query: 267 LGCLPVAFFLCCVGQNALGYKRADNV*RVKEEKENN*INSCFQ 395 PV+ F+CC+ N L K N+ EK N + CFQ Sbjct: 306 ----PVSVFVCCMKDNYLFLKEVKNL----VEKTNCELKVCFQ 340
>Q09195:ERG24_SCHPO Delta(14)-sterol reductase - Schizosaccharomyces pombe (Fission| yeast) Length = 424 Score = 28.9 bits (63), Expect = 5.8 Identities = 11/33 (33%), Positives = 22/33 (66%) Frame = -3 Query: 377 SIILLLFFYSLYVISTLVPESVLANTTQEESDG 279 S++L++ F++ YV+ +L+ ES + T +DG Sbjct: 228 SMVLVIIFHTWYVLDSLINESAVLTTMDITTDG 260
>Q8K2W9:CN093_MOUSE Uncharacterized protein C14orf93 homolog precursor - Mus musculus| (Mouse) Length = 541 Score = 28.9 bits (63), Expect = 5.8 Identities = 15/80 (18%), Positives = 34/80 (42%) Frame = -3 Query: 266 QRRGAKAISRIWWQYGRDETVVRRRNPQRQSMNGKIPGKDRGSNSDSLNSPSIFMAKKNM 87 ++ K SR + + +++R P+ Q + + + DSLN P +++A+ Sbjct: 388 EKEEKKLRSRRYRLFANRSSIMRHFGPEDQHLWKDVTEELMSDEEDSLNEPGVWVARSPR 447 Query: 86 HSSRAAYQYCPRQTLTATHG 27 ++ + C + HG Sbjct: 448 FRAQRLTELCYHLDANSKHG 467
>P29815:SPHR_AMEPV Spheroidin - Amsacta moorei entomopoxvirus (AmEPV)| Length = 1003 Score = 28.9 bits (63), Expect = 5.9 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 10/43 (23%) Frame = -2 Query: 342 RYQHACTRERFGQHNTRRKRRG----------DNLTAARRQGY 244 RYQ +CT FG + R G DN T RR GY Sbjct: 889 RYQESCTPNTFGNNTNCVTRNGEQHVYENSCGDNATCGRRTGY 931
>P10205:UL21_HHV11 Protein UL21 - Human herpesvirus 1 (strain 17) (HHV-1) (Human| herpes simplex virus 1) Length = 535 Score = 28.5 bits (62), Expect = 7.5 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +3 Query: 111 GGAVETVGVAASILAGDFTVHGLTLRIPSPDDRLV 215 GG V +VG + G+ GL +R PDDR+V Sbjct: 30 GGCVYSVGRPCASQPGEIAKFGLVVRGTGPDDRVV 64
>P0C0R5:PI3R4_RAT Phosphoinositide 3-kinase regulatory subunit 4 - Rattus norvegicus| (Rat) Length = 1358 Score = 28.5 bits (62), Expect = 7.5 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +3 Query: 81 GMHVLLCHEDGGAVETVGVAASILAGDFTVHGLTLRI 191 G H L D GAV+ +G+ AS L +H L RI Sbjct: 1053 GSHYLAIASDNGAVQLLGIEASKLPKSPKIHPLQSRI 1089
>Q5R9I3:PI3R4_PONPY Phosphoinositide 3-kinase regulatory subunit 4 - Pongo pygmaeus| (Orangutan) Length = 1358 Score = 28.5 bits (62), Expect = 7.5 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +3 Query: 81 GMHVLLCHEDGGAVETVGVAASILAGDFTVHGLTLRI 191 G H L D GAV+ +G+ AS L +H L RI Sbjct: 1053 GSHYLAIASDNGAVQLLGIEASKLPKSPKIHPLQSRI 1089
>Q8VD65:PI3R4_MOUSE Phosphoinositide 3-kinase regulatory subunit 4 - Mus musculus (Mouse)| Length = 1358 Score = 28.5 bits (62), Expect = 7.5 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +3 Query: 81 GMHVLLCHEDGGAVETVGVAASILAGDFTVHGLTLRI 191 G H L D GAV+ +G+ AS L +H L RI Sbjct: 1053 GSHYLAIASDNGAVQLLGIEASKLPKSPKIHPLQSRI 1089
>Q99570:PI3R4_HUMAN Phosphoinositide 3-kinase regulatory subunit 4 - Homo sapiens (Human)| Length = 1358 Score = 28.5 bits (62), Expect = 7.5 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +3 Query: 81 GMHVLLCHEDGGAVETVGVAASILAGDFTVHGLTLRI 191 G H L D GAV+ +G+ AS L +H L RI Sbjct: 1053 GSHYLAIASDNGAVQLLGIEASKLPKSPKIHPLQSRI 1089
>P78364:PHC1_HUMAN Polyhomeotic-like protein 1 - Homo sapiens (Human)| Length = 1004 Score = 28.5 bits (62), Expect = 7.7 Identities = 23/76 (30%), Positives = 32/76 (42%) Frame = -1 Query: 277 RQPNSGEAPRLSLASGGNTAGTRRSSGDGILSVNP*TVKSPARIEAATPTVSTAPPSSWQ 98 RQP + +A L LA T R P TV+S A++P S AP + + Sbjct: 533 RQPGTAQAQALGLAQLAAAVPTSRGM--------PGTVQSGQAHLASSPPSSQAPGALQE 584 Query: 97 RRTCIPPGRRINTVQG 50 + PG + VQG Sbjct: 585 CPPTLAPGMTLAPVQG 600
>P02896:VSM4_TRYBB Variant surface glycoprotein MITAT 1.4A precursor - Trypanosoma| brucei brucei Length = 526 Score = 28.1 bits (61), Expect = 9.8 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = -3 Query: 164 KIPGKDRGSNSDSLNSPSIFMAKKNMHSSRAAY 66 ++PGK G+N+ N ++F + HSS+ Y Sbjct: 199 QVPGKQDGANAGQANMCALFTHQATPHSSQGIY 231
>Q5XGG2:TRUB2_XENTR Probable tRNA pseudouridine synthase 2 - Xenopus tropicalis| (Western clawed frog) (Silurana tropicalis) Length = 325 Score = 28.1 bits (61), Expect = 9.8 Identities = 11/25 (44%), Positives = 15/25 (60%) Frame = -3 Query: 203 VRRRNPQRQSMNGKIPGKDRGSNSD 129 V R NP R++ G IPG RG+ + Sbjct: 296 VSRGNPDREAAEGPIPGPSRGAEGE 320
>P20717:PADI2_RAT Protein-arginine deiminase type-2 - Rattus norvegicus (Rat)| Length = 665 Score = 28.1 bits (61), Expect = 9.8 Identities = 15/39 (38%), Positives = 20/39 (51%) Frame = +3 Query: 279 PVAFFLCCVGQNALGYKRADNV*RVKEEKENN*INSCFQ 395 PV+ F+CC+ N L K N+ EK N + CFQ Sbjct: 306 PVSVFVCCMKDNYLFLKEVKNL----VEKTNCELKVCFQ 340
>Q5AM50:NMD4_CANAL Nonsense-mediated decay protein 4 - Candida albicans (Yeast)| Length = 398 Score = 28.1 bits (61), Expect = 9.8 Identities = 17/54 (31%), Positives = 23/54 (42%) Frame = -3 Query: 350 SLYVISTLVPESVLANTTQEESDGETT*QRRGAKAISRIWWQYGRDETVVRRRN 189 +LY S++ E V +N + + G RRG K R W D V RN Sbjct: 316 TLYSYSSVQDEPVTSNYRGKNNRGRNNRGRRGNKRRERERWPLSTDAVVSEERN 369
>Q3IIZ7:GLND_PSEHT [Protein-PII] uridylyltransferase - Pseudoalteromonas haloplanktis| (strain TAC 125) Length = 872 Score = 28.1 bits (61), Expect = 9.8 Identities = 10/28 (35%), Positives = 16/28 (57%) Frame = -3 Query: 137 NSDSLNSPSIFMAKKNMHSSRAAYQYCP 54 NS+ L+ PS+ ++ K MH + Y P Sbjct: 671 NSEDLSQPSVIVSNKAMHGGTQVFVYSP 698
>Q0SFQ8:FOLD1_RHOSR Bifunctional protein folD 1 [Includes: Methylenetetrahydrofolate| dehydrogenase - Rhodococcus sp. (strain RHA1) Length = 297 Score = 28.1 bits (61), Expect = 9.8 Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 6/58 (10%) Frame = +3 Query: 111 GGAVETVGVAASI--LAGDFTVHGLTLRIPSPD----DRLVPAVLPPDARDSLGASPL 266 G A T + +++ L D VHG+ L+ P PD D L A+ P A+D GA+P+ Sbjct: 69 GAAASTEQIRSTLVELGHDPDVHGIILQTPLPDGTDLDALREAINP--AKDVDGANPV 124
>Q9ESP7:ATS4_RAT ADAMTS-4 precursor - Rattus norvegicus (Rat)| Length = 630 Score = 28.1 bits (61), Expect = 9.8 Identities = 11/50 (22%), Positives = 27/50 (54%) Frame = +3 Query: 78 GGMHVLLCHEDGGAVETVGVAASILAGDFTVHGLTLRIPSPDDRLVPAVL 227 G H+L+ + G ++++ +A + G + ++G +PS D ++P + Sbjct: 501 GRTHILVRQQGGSGLKSIYLALKLADGSYALNGEYTLMPSSTDVVLPGAV 550
>Q62431:ARI3A_MOUSE AT-rich interactive domain-containing protein 3A - Mus musculus| (Mouse) Length = 601 Score = 28.1 bits (61), Expect = 9.8 Identities = 24/88 (27%), Positives = 35/88 (39%) Frame = +3 Query: 24 RAMGRRQSLPWTVLIRRPGGMHVLLCHEDGGAVETVGVAASILAGDFTVHGLTLRIPSPD 203 R GRRQS ++ P G H +L V +G+AAS T +I + Sbjct: 351 RREGRRQSFGGSLFAYSPSGAHSML-PSPKLPVTPLGLAASTNGSSITP---APKIKKEE 406 Query: 204 DRLVPAVLPPDARDSLGASPLLGCLPVA 287 D +P +P SL P++ A Sbjct: 407 DSAIPITVPGRLPVSLAGHPVVAAQAAA 434 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 74,819,145 Number of extensions: 1757048 Number of successful extensions: 6287 Number of sequences better than 10.0: 41 Number of HSP's gapped: 6279 Number of HSP's successfully gapped: 41 Length of query: 137 Length of database: 100,686,439 Length adjustment: 101 Effective length of query: 36 Effective length of database: 72,982,644 Effective search space: 2627375184 Effective search space used: 2627375184 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
