ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58f12 |
|---|---|
| Clone Library Name | barley_pub |
>Q6TAW2:RMP42_MOUSE Putative ribosome-associated membrane protein RAMP4-2 - Mus| musculus (Mouse) Length = 65 Score = 55.1 bits (131), Expect = 2e-07 Identities = 26/52 (50%), Positives = 36/52 (69%) Frame = +1 Query: 256 KFQKNITKRGSVPETTVKKGNDYPVGPIVLGFFIFVVIGSSLFQIIRTATSG 411 K KNIT+RG+V +T + YPVGP +L F+FVV GS++FQII++ G Sbjct: 13 KHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64
>Q8N6R1:RMP42_HUMAN Putative ribosome-associated membrane protein RAMP4-2 - Homo| sapiens (Human) Length = 65 Score = 55.1 bits (131), Expect = 2e-07 Identities = 26/52 (50%), Positives = 36/52 (69%) Frame = +1 Query: 256 KFQKNITKRGSVPETTVKKGNDYPVGPIVLGFFIFVVIGSSLFQIIRTATSG 411 K KNIT+RG+V +T + YPVGP +L F+FVV GS++FQII++ G Sbjct: 13 KHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64
>Q3T073:RMP42_BOVIN Putative ribosome-associated membrane protein RAMP4-2 - Bos taurus| (Bovine) Length = 65 Score = 55.1 bits (131), Expect = 2e-07 Identities = 26/52 (50%), Positives = 36/52 (69%) Frame = +1 Query: 256 KFQKNITKRGSVPETTVKKGNDYPVGPIVLGFFIFVVIGSSLFQIIRTATSG 411 K KNIT+RG+V +T + YPVGP +L F+FVV GS++FQII++ G Sbjct: 13 KHSKNITQRGNVAKTLRPQEEKYPVGPWLLALFVFVVCGSAIFQIIQSIRMG 64
>Q5REZ1:RAMP4_PONPY Ribosome-attached membrane protein 4 - Pongo pygmaeus (Orangutan)| Length = 66 Score = 47.8 bits (112), Expect = 4e-05 Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = +1 Query: 256 KFQKNITKRGSVPETTVKK-GNDYPVGPIVLGFFIFVVIGSSLFQIIRTATSG 411 K KNIT+RG+V +T+ G VGP +L FIFVV GS++FQII++ G Sbjct: 13 KHSKNITQRGNVAKTSRNAPGEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG 65
>Q9R2C1:RAMP4_RAT Ribosome-attached membrane protein 4 - Rattus norvegicus (Rat)| Length = 66 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = +1 Query: 256 KFQKNITKRGSVPETTVKKGNDYP-VGPIVLGFFIFVVIGSSLFQIIRTATSG 411 K KNIT+RG+V +T+ + VGP +L FIFVV GS++FQII++ G Sbjct: 13 KHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG 65
>Q9Z1W5:RAMP4_MOUSE Ribosome-attached membrane protein 4 - Mus musculus (Mouse)| Length = 66 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = +1 Query: 256 KFQKNITKRGSVPETTVKKGNDYP-VGPIVLGFFIFVVIGSSLFQIIRTATSG 411 K KNIT+RG+V +T+ + VGP +L FIFVV GS++FQII++ G Sbjct: 13 KHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG 65
>Q9Y6X1:RAMP4_HUMAN Ribosome-attached membrane protein 4 - Homo sapiens (Human)| Length = 66 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = +1 Query: 256 KFQKNITKRGSVPETTVKKGNDYP-VGPIVLGFFIFVVIGSSLFQIIRTATSG 411 K KNIT+RG+V +T+ + VGP +L FIFVV GS++FQII++ G Sbjct: 13 KHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG 65
>Q3ZBR1:RAMP4_BOVIN Ribosome-attached membrane protein 4 - Bos taurus (Bovine)| Length = 66 Score = 45.8 bits (107), Expect = 1e-04 Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 1/53 (1%) Frame = +1 Query: 256 KFQKNITKRGSVPETTVKKGNDYP-VGPIVLGFFIFVVIGSSLFQIIRTATSG 411 K KNIT+RG+V +T+ + VGP +L FIFVV GS++FQII++ G Sbjct: 13 KHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMG 65
>Q9C026:TRIM9_HUMAN Tripartite motif-containing protein 9 - Homo sapiens (Human)| Length = 710 Score = 33.9 bits (76), Expect = 0.54 Identities = 19/59 (32%), Positives = 27/59 (45%) Frame = +2 Query: 2 TFGPVGSNPAGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPSAAC 178 ++G S P P +K+ + V P +P PA+ SPALAP+PR C Sbjct: 80 SYGGFASAPTTPCQKSPNGVRV----------FPPAMPPPATHLSPALAPVPRNSCITC 128
>Q5Z974:FTSH_ORYSJ Cell division protease ftsH homolog, chloroplast precursor - Oryza| sativa subsp. japonica (Rice) Length = 686 Score = 32.7 bits (73), Expect = 1.2 Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 14/74 (18%) Frame = +2 Query: 29 AGPERKASGALLVVRGSFYKPPRLSPLIPHP------------ASPTSPALAPIPRTPSA 172 A P +S + L++ S KP P +PHP A+PT PALA +P P + Sbjct: 2 APPCSISSASHLLITASLPKPSLRPPRLPHPKPLPAALLALAAAAPTLPALADVPAPPPS 61 Query: 173 AC--IVSGELPCPA 208 + E P PA Sbjct: 62 PTQDVQVLEAPSPA 75
>P17599:SYN1_BOVIN Synapsin-1 - Bos taurus (Bovine)| Length = 706 Score = 32.3 bits (72), Expect = 1.6 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +2 Query: 86 KPPRLSPLIPHPASPTSPALAPIPRTPSAACIVSGELPCP 205 +PP P P P + T PA A R SAA + S P P Sbjct: 29 QPPPPPPAAPSPGATTGPATATAERASSAAPVASPAAPSP 68
>Q9ESD7:DYSF_MOUSE Dysferlin - Mus musculus (Mouse)| Length = 2083 Score = 32.3 bits (72), Expect = 1.6 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 4/46 (8%) Frame = +2 Query: 38 ERKASGALLVVRGSFYKPPRLSPLIPHPA----SPTSPALAPIPRT 163 +++ +GA LV++ S+ PP PL P PA SPT P + +P T Sbjct: 110 KQQPTGASLVLQVSYTPPPGAVPLFPPPASLAPSPTLPDMDLVPDT 155
>Q9ES64:USH1C_MOUSE Harmonin - Mus musculus (Mouse)| Length = 910 Score = 32.0 bits (71), Expect = 2.1 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%) Frame = +2 Query: 80 FYKPPRLS---PLIPHPASPTSPALAPIPRT-PSAACIVSGELP 199 FY PP+ P++PHP S SP+ P P PS+ + S P Sbjct: 551 FYYPPKTPSALPVMPHPPSVNSPSKVPAPPVLPSSGHVSSSSSP 594
>Q91ZY8:TRIM9_RAT Tripartite motif-containing protein 9 - Rattus norvegicus (Rat)| Length = 710 Score = 32.0 bits (71), Expect = 2.1 Identities = 18/59 (30%), Positives = 26/59 (44%) Frame = +2 Query: 2 TFGPVGSNPAGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPSAAC 178 ++G S P P +K+ + V P +P P + SPALAP+PR C Sbjct: 80 SYGGFASAPTTPCQKSPNGVRV----------FPPAMPPPPTHLSPALAPVPRNSCITC 128
>Q8C7M3:TRIM9_MOUSE Tripartite motif-containing protein 9 - Mus musculus (Mouse)| Length = 817 Score = 32.0 bits (71), Expect = 2.1 Identities = 18/59 (30%), Positives = 26/59 (44%) Frame = +2 Query: 2 TFGPVGSNPAGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPSAAC 178 ++G S P P +K+ + V P +P P + SPALAP+PR C Sbjct: 80 SYGGFASAPTTPCQKSPNGVRV----------FPPAMPPPPTHLSPALAPVPRNSCITC 128
>Q63327:MOBP_RAT Myelin-associated oligodendrocyte basic protein - Rattus norvegicus| (Rat) Length = 170 Score = 32.0 bits (71), Expect = 2.1 Identities = 19/50 (38%), Positives = 28/50 (56%) Frame = +2 Query: 20 SNPAGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPS 169 ++P P+ + + + +VVR KP SP P PA P SP + PR+PS Sbjct: 73 TSPQKPKHQPAASPVVVRAPPAKPK--SP--PRPAKPRSPPIPAKPRSPS 118
>P10515:ODP2_HUMAN Dihydrolipoyllysine-residue acetyltransferase component of pyruvate| dehydrogenase complex, mitochondrial precursor - Homo sapiens (Human) Length = 614 Score = 31.6 bits (70), Expect = 2.7 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +2 Query: 83 YKPPRLSPLIPHPASPTSPALAPIPRTPSAACIVSGELPCPA 208 Y+P ++ L P PT P +A +P TP + PCPA Sbjct: 273 YRPTEVTDLKPQVPPPTPPPVAAVPPTPQPLA-PTPSTPCPA 313
>Q91W69:EPN3_MOUSE Epsin-3 - Mus musculus (Mouse)| Length = 636 Score = 31.6 bits (70), Expect = 2.7 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +2 Query: 11 PVGSNPAGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIP 157 P+ S P G AS ++ G+F PP +P P PTS + P+P Sbjct: 582 PLSSVPVGATLPASVSVFPQAGAFAPPP---ASLPQPLLPTSGPMGPLP 627
>Q8WXD9:CSKI1_HUMAN Caskin-1 - Homo sapiens (Human)| Length = 1431 Score = 31.6 bits (70), Expect = 2.7 Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 4/70 (5%) Frame = +2 Query: 8 GPVGSNPA-GPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPAL---APIPRTPSAA 175 G G +PA P R+ AL G+ PP L P SP +PAL A PR +AA Sbjct: 1293 GSAGPSPAPSPARQPPAALAKPPGT---PPSLGASPAKPPSPGAPALHVPAKPPRAAAAA 1349 Query: 176 CIVSGELPCP 205 + P P Sbjct: 1350 AAAAAAPPAP 1359
>Q94F57:AGP26_ARATH Classical arabinogalactan protein 26 precursor - Arabidopsis| thaliana (Mouse-ear cress) Length = 136 Score = 31.6 bits (70), Expect = 2.7 Identities = 19/64 (29%), Positives = 29/64 (45%) Frame = +2 Query: 5 FGPVGSNPAGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPSAACIV 184 F GS+ P S + + S PP + P P SP +P+P + S+ C+V Sbjct: 57 FPTPGSSEMSPSPSESSIMPTIPSSL-SPPNPDAVTPDPLLEVSPVGSPLPAS-SSVCLV 114 Query: 185 SGEL 196 S +L Sbjct: 115 SSQL 118
>Q5UNW8:YL719_MIMIV Uncharacterized protein L719 - Mimivirus| Length = 343 Score = 31.2 bits (69), Expect = 3.5 Identities = 13/26 (50%), Positives = 18/26 (69%) Frame = +2 Query: 92 PRLSPLIPHPASPTSPALAPIPRTPS 169 P +SP+ P P SP P ++P+P TPS Sbjct: 233 PPISPVQP-PISPVQPPISPVPSTPS 257
>A2T715:SCND1_PANTR SCAN domain-containing protein 1 - Pan troglodytes (Chimpanzee)| Length = 179 Score = 31.2 bits (69), Expect = 3.5 Identities = 24/61 (39%), Positives = 29/61 (47%) Frame = +2 Query: 17 GSNPAGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPSAACIVSGEL 196 GS+ A PER G+ L P SP P P+SP + IP TP AA + EL Sbjct: 26 GSSSA-PERNCVGSSL---------PEASPPAPEPSSPNAAVPEAIP-TPRAAASAALEL 74 Query: 197 P 199 P Sbjct: 75 P 75
>A1YG31:SCND1_PANPA SCAN domain-containing protein 1 - Pan paniscus (Pygmy chimpanzee)| (Bonobo) Length = 179 Score = 31.2 bits (69), Expect = 3.5 Identities = 24/61 (39%), Positives = 29/61 (47%) Frame = +2 Query: 17 GSNPAGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPSAACIVSGEL 196 GS+ A PER G+ L P SP P P+SP + IP TP AA + EL Sbjct: 26 GSSSA-PERNCVGSSL---------PEASPPAPEPSSPNAAVPEAIP-TPRAAASAALEL 74 Query: 197 P 199 P Sbjct: 75 P 75
>P57086:SCND1_HUMAN SCAN domain-containing protein 1 - Homo sapiens (Human)| Length = 179 Score = 31.2 bits (69), Expect = 3.5 Identities = 24/61 (39%), Positives = 29/61 (47%) Frame = +2 Query: 17 GSNPAGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPSAACIVSGEL 196 GS+ A PER G+ L P SP P P+SP + IP TP AA + EL Sbjct: 26 GSSSA-PERNCVGSSL---------PEASPPAPEPSSPNAAVPEAIP-TPRAAASAALEL 74 Query: 197 P 199 P Sbjct: 75 P 75
>A1YEW3:SCND1_GORGO SCAN domain-containing protein 1 - Gorilla gorilla gorilla (Lowland| gorilla) Length = 179 Score = 31.2 bits (69), Expect = 3.5 Identities = 24/61 (39%), Positives = 29/61 (47%) Frame = +2 Query: 17 GSNPAGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPSAACIVSGEL 196 GS+ A PER G+ L P SP P P+SP + IP TP AA + EL Sbjct: 26 GSSSA-PERNCVGSSL---------PEASPPAPEPSSPNAAVPEAIP-TPRAAASAALEL 74 Query: 197 P 199 P Sbjct: 75 P 75
>Q9H3P2:NELFA_HUMAN Negative elongation factor A - Homo sapiens (Human)| Length = 549 Score = 31.2 bits (69), Expect = 3.5 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 7/45 (15%) Frame = +2 Query: 98 LSPLIPHPASPTS-------PALAPIPRTPSAACIVSGELPCPAK 211 LSP P PA+PTS PA+AP +TP A +V+ + PA+ Sbjct: 402 LSPATPTPAAPTSPLTPTTPPAVAPTTQTPPVA-MVAPQTQAPAQ 445
>Q750X2:BBP_ASHGO Branchpoint-bridging protein - Ashbya gossypii (Yeast)| (Eremothecium gossypii) Length = 507 Score = 31.2 bits (69), Expect = 3.5 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Frame = +2 Query: 8 GPVGSNPAGPERKASGALLVVRGSFYKPPRLSP--LIPHPASPTSPALAPIPRTPSAACI 181 GPVGS+P+ P S V S + P ++P +P P S +P P P A Sbjct: 344 GPVGSHPSAP-GSGSANSGVAPASLHPPGTMAPPGALPPPGSLAAPGTLPPPAALPAPA- 401 Query: 182 VSGELPCP 205 G LP P Sbjct: 402 APGTLPPP 409
>Q61245:COBA1_MOUSE Collagen alpha-1(XI) chain precursor - Mus musculus (Mouse)| Length = 1804 Score = 31.2 bits (69), Expect = 3.5 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 7/38 (18%) Frame = -1 Query: 189 PETMQAADGVRGIGASAGEVGDAG-------CGIKGER 97 P ++ ADGVRG+ S GE G+ G G+KG+R Sbjct: 759 PRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDR 796
>P12107:COBA1_HUMAN Collagen alpha-1(XI) chain precursor - Homo sapiens (Human)| Length = 1806 Score = 31.2 bits (69), Expect = 3.5 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 7/38 (18%) Frame = -1 Query: 189 PETMQAADGVRGIGASAGEVGDAG-------CGIKGER 97 P ++ ADGVRG+ S GE G+ G G+KG+R Sbjct: 761 PRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDR 798
>Q28083:COBA1_BOVIN Collagen alpha-1(XI) chain precursor - Bos taurus (Bovine)| Length = 911 Score = 31.2 bits (69), Expect = 3.5 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 7/38 (18%) Frame = -1 Query: 189 PETMQAADGVRGIGASAGEVGDAG-------CGIKGER 97 P ++ ADGVRG+ S GE G+ G G+KG+R Sbjct: 528 PRGVKGADGVRGLKGSKGEKGEDGFPGFKGDMGLKGDR 565
>Q29RQ5:TRIM9_BOVIN Tripartite motif-containing protein 9 - Bos taurus (Bovine)| Length = 710 Score = 30.8 bits (68), Expect = 4.6 Identities = 18/59 (30%), Positives = 26/59 (44%) Frame = +2 Query: 2 TFGPVGSNPAGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPSAAC 178 ++G S P P +K+ + V P +P PA+ SPALA +PR C Sbjct: 80 SYGGFASAPTTPCQKSPNGVRV----------FPPAMPPPATHLSPALASVPRNSCITC 128
>Q6CVA2:STE20_KLULA Serine/threonine-protein kinase STE20 - Kluyveromyces lactis| (Yeast) (Candida sphaerica) Length = 989 Score = 30.8 bits (68), Expect = 4.6 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +2 Query: 89 PPRLSPLIPHPASPTSPALAPIPRTPSAACI 181 P R +P P PA PT+P + IP PS + Sbjct: 620 PARAAPTPPKPAIPTTPEQSSIPAIPSGLAV 650
>Q8HUG7:MATK_CORVR Maturase K - Coronilla varia (Crown vetch)| Length = 508 Score = 30.8 bits (68), Expect = 4.6 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = -2 Query: 653 FFFFLYNFKVSTYAPFIF*FRV*TSFLVTQGNHDRTR 543 FFFFLYNF V Y F FL TQ +H R + Sbjct: 207 FFFFLYNFYVCEYESIFF-------FLRTQSSHLRLK 236
>Q86XN7:K2032_HUMAN Uncharacterized protein KIAA2032 - Homo sapiens (Human)| Length = 944 Score = 30.8 bits (68), Expect = 4.6 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 11/71 (15%) Frame = +2 Query: 11 PVGSNPAGPERK-ASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPR--------- 160 P NP G E + S ++ + P PH ++P++PA P+P Sbjct: 235 PYTPNPVGTENEDLSNPSKPIQNQTFSTPASQLFSPHGSNPSTPAATPVPTASPVKAINH 294 Query: 161 -TPSAACIVSG 190 + SAA VSG Sbjct: 295 PSASAAATVSG 305
>Q8NP40:IF2_CORGL Translation initiation factor IF-2 - Corynebacterium glutamicum| (Brevibacterium flavum) Length = 1004 Score = 30.8 bits (68), Expect = 4.6 Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 1/66 (1%) Frame = +2 Query: 11 PVGSNPAGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPSAACIVS- 187 P + PA P+ AS A P PA P +PA P P PSAA Sbjct: 65 PAAAKPAAPKPAASAA---------------PKPGAPAKPAAPAAKPAPAAPSAASAAKP 109 Query: 188 GELPCP 205 G P P Sbjct: 110 GAAPKP 115
>P50901:HOX3_BRAFL Homeobox protein HOX3 - Branchiostoma floridae (Florida lancelet)| (Amphioxus) Length = 411 Score = 30.8 bits (68), Expect = 4.6 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +2 Query: 77 SFYKPPRLSPLIPHPASPTSPALAPIPRTPSAACIVSGELPCP 205 S Y PP L+ +PH A P S L + S C S PCP Sbjct: 260 SQYPPPHLNHSLPHQAPPHSVGLT-MSGPVSPQCYQSNHSPCP 301
>Q9T076:ENL2_ARATH Early nodulin-like protein 2 precursor - Arabidopsis thaliana| (Mouse-ear cress) Length = 349 Score = 30.8 bits (68), Expect = 4.6 Identities = 16/53 (30%), Positives = 22/53 (41%) Frame = +2 Query: 11 PVGSNPAGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPS 169 P S+ P G++ GS P P P SP SP+ AP+ P+ Sbjct: 187 PKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPKSTSPVSPSSAPMTSPPA 239
>Q6K8S3:CCF14_ORYSJ Putative cyclin-F1-4 - Oryza sativa subsp. japonica (Rice)| Length = 432 Score = 30.8 bits (68), Expect = 4.6 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%) Frame = +2 Query: 98 LSPLIPHPASPTSPALAPIPRTP---SAACIVSGELP 199 L PL P PA+P +PA PRTP + V G+LP Sbjct: 57 LPPLAPPPAAPLAPAPPDSPRTPHTYGSLLPVYGDLP 93
>Q7L311:ARMX2_HUMAN Armadillo repeat-containing X-linked protein 2 - Homo sapiens| (Human) Length = 632 Score = 30.8 bits (68), Expect = 4.6 Identities = 18/54 (33%), Positives = 23/54 (42%) Frame = +2 Query: 44 KASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPSAACIVSGELPCP 205 +A+ V G P P ASPT A AP+P TP+ A +G P Sbjct: 186 EAAAPTEVTEGPGVAAPTKVAEAPGVASPTEAAEAPVPATPTGAAAPTGAAESP 239
>Q28645:PODXL_RABIT Podocalyxin-like protein 1 precursor - Oryctolagus cuniculus| (Rabbit) Length = 551 Score = 30.4 bits (67), Expect = 6.0 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 10/66 (15%) Frame = +2 Query: 2 TFGPVGSNPAGPERKASGALLVVRGSFYKPPRLSPLI----------PHPASPTSPALAP 151 + GPV + G SG L +G KP L+P+ P P SP SP+ +P Sbjct: 208 SLGPVTGSGTG-----SGTLSTPQG---KPATLTPVASSAETQGMPSPMPPSPASPSSSP 259 Query: 152 IPRTPS 169 P +PS Sbjct: 260 FPSSPS 265
>O14686:MLL2_HUMAN Myeloid/lymphoid or mixed-lineage leukemia protein 2 - Homo sapiens| (Human) Length = 5262 Score = 30.4 bits (67), Expect = 6.0 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +2 Query: 92 PRLSPLIPHPASPTSPALAPIPRTPSAACIVSGELP 199 P SPL P PASP + L +P P A V LP Sbjct: 4641 PPPSPLAPSPASPPTEPLVELPTEPLAEPPVPSPLP 4676
>Q87ST6:KSGA_VIBPA Dimethyladenosine transferase - Vibrio parahaemolyticus| Length = 269 Score = 30.4 bits (67), Expect = 6.0 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = +2 Query: 29 AGPERKASGALLVVRGSFYKPPRLSPLIPHPASPTSPALAPIPRTPSAAC--IVSGELPC 202 AGP KA G L V+ + K + P++ P PT A P P+ SA + ELPC Sbjct: 149 AGPGSKAYGRLTVMAQYYCK---VVPVLEVP--PT--AFVPPPKVDSAVVRLVPYEELPC 201 Query: 203 PAK 211 PAK Sbjct: 202 PAK 204
>P08314:ATI2_HHV1F Alpha trans-inducing factor 77 kDa protein - Human herpesvirus 1| (strain F) (HHV-1) (Human herpes simplex virus 1) Length = 715 Score = 30.4 bits (67), Expect = 6.0 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 3/71 (4%) Frame = +2 Query: 8 GPVGSNPAGPERKASGALLVVRGSFYKPPRLSPLIP---HPASPTSPALAPIPRTPSAAC 178 G VG +GP R+ + A PP SP + HPA P +P P P P A Sbjct: 453 GTVGKRFSGPARQRAPA----------PPPTSPTLDPRGHPAVPEAPRGRPAPPLPDADD 502 Query: 179 IVSGELPCPAK 211 V+ C A+ Sbjct: 503 PVAEPPGCAAQ 513
>Q9JI03:CO5A1_RAT Collagen alpha-1(V) chain precursor - Rattus norvegicus (Rat)| Length = 1840 Score = 30.4 bits (67), Expect = 6.0 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 7/38 (18%) Frame = -1 Query: 189 PETMQAADGVRGIGASAGEVGDAG-------CGIKGER 97 P ++ ADG+RG+ + GE G+ G GIKG+R Sbjct: 793 PRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDR 830
>O88207:CO5A1_MOUSE Collagen alpha-1(V) chain precursor - Mus musculus (Mouse)| Length = 1838 Score = 30.4 bits (67), Expect = 6.0 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 7/38 (18%) Frame = -1 Query: 189 PETMQAADGVRGIGASAGEVGDAG-------CGIKGER 97 P ++ ADG+RG+ + GE G+ G GIKG+R Sbjct: 791 PRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDR 828
>P20908:CO5A1_HUMAN Collagen alpha-1(V) chain precursor - Homo sapiens (Human)| Length = 1838 Score = 30.4 bits (67), Expect = 6.0 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 7/38 (18%) Frame = -1 Query: 189 PETMQAADGVRGIGASAGEVGDAG-------CGIKGER 97 P ++ ADG+RG+ + GE G+ G GIKG+R Sbjct: 791 PRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDR 828
>Q60467:CO5A1_CRILO Collagen alpha-1(V) chain precursor - Cricetulus longicaudatus| (Long-tailed hamster) (Chinese hamster) Length = 1840 Score = 30.4 bits (67), Expect = 6.0 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 7/38 (18%) Frame = -1 Query: 189 PETMQAADGVRGIGASAGEVGDAG-------CGIKGER 97 P ++ ADG+RG+ + GE G+ G GIKG+R Sbjct: 793 PRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDR 830
>Q4HZE0:ALG10_GIBZE Alpha-1,2 glucosyltransferase ALG10 - Gibberella zeae (Fusarium| graminearum) Length = 722 Score = 30.4 bits (67), Expect = 6.0 Identities = 21/68 (30%), Positives = 28/68 (41%) Frame = -1 Query: 237 KTP*SSHPCLAGQGSSPETMQAADGVRGIGASAGEVGDAGCGIKGERRGGL*KDPLTTSK 58 K+P +HP +G+SP+ A A EV D + E L KDPL S Sbjct: 550 KSPFLNHPAFTNRGASPQQTDA--------APPAEVKDLDANQQQELSQALKKDPLLASV 601 Query: 57 APEAFLSG 34 P +G Sbjct: 602 EPATTSTG 609
>Q61900:SMR1_MOUSE Submaxillary gland androgen-regulated protein 1 precursor - Mus| musculus (Mouse) Length = 147 Score = 30.0 bits (66), Expect = 7.8 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 89 PPRLSPLIPHPASPTSPALAPIPRTP 166 PP P+ PHP P++P+ P P P Sbjct: 76 PPPCPPVPPHPRPPSNPSPPPTPSIP 101
>Q8TB24:RIN3_HUMAN Ras and Rab interactor 3 - Homo sapiens (Human)| Length = 984 Score = 30.0 bits (66), Expect = 7.8 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 6/72 (8%) Frame = +2 Query: 11 PVGSNPAGPERKASGALLVV-RGSFYKPPRLSPLIP-HPASPTSP----ALAPIPRTPSA 172 P+G+ PA P S A R + +PP P++P P SP P ALAP P Sbjct: 253 PLGNCPARPLPPTSDATSPTSRWAPRRPPPPPPVLPLQPCSPAQPPVLPALAPAP----- 307 Query: 173 ACIVSGELPCPA 208 AC + P PA Sbjct: 308 ACPLPTSPPVPA 319
>O62541:HUNB_DROYA Protein hunchback - Drosophila yakuba (Fruit fly)| Length = 759 Score = 30.0 bits (66), Expect = 7.8 Identities = 17/40 (42%), Positives = 24/40 (60%) Frame = +2 Query: 89 PPRLSPLIPHPASPTSPALAPIPRTPSAACIVSGELPCPA 208 PP SP++P PASP + ++A + +TPS LP PA Sbjct: 435 PPAASPVLPLPASP-AKSVASVEQTPS--------LPSPA 465
>O62538:HUNB_DROSE Protein hunchback - Drosophila sechellia (Fruit fly)| Length = 757 Score = 30.0 bits (66), Expect = 7.8 Identities = 17/40 (42%), Positives = 24/40 (60%) Frame = +2 Query: 89 PPRLSPLIPHPASPTSPALAPIPRTPSAACIVSGELPCPA 208 PP SP++P PASP + ++A + +TPS LP PA Sbjct: 434 PPAASPVLPLPASP-AKSVASVEQTPS--------LPSPA 464
>P05084:HUNB_DROME Protein hunchback - Drosophila melanogaster (Fruit fly)| Length = 758 Score = 30.0 bits (66), Expect = 7.8 Identities = 17/40 (42%), Positives = 24/40 (60%) Frame = +2 Query: 89 PPRLSPLIPHPASPTSPALAPIPRTPSAACIVSGELPCPA 208 PP SP++P PASP + ++A + +TPS LP PA Sbjct: 435 PPAASPVLPLPASP-AKSVASVEQTPS--------LPSPA 465
>Q9DAC0:CLF2B_MOUSE CKLF-like MARVEL transmembrane domain-containing protein 2B - Mus| musculus (Mouse) Length = 210 Score = 30.0 bits (66), Expect = 7.8 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = -2 Query: 653 FFFFLYNFKVSTYAPFIF 600 FFFFLY+ ++ Y PF+F Sbjct: 80 FFFFLYSLAINRYIPFVF 97 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 106,499,688 Number of extensions: 2240654 Number of successful extensions: 8607 Number of sequences better than 10.0: 54 Number of HSP's gapped: 8419 Number of HSP's successfully gapped: 54 Length of query: 219 Length of database: 100,686,439 Length adjustment: 109 Effective length of query: 110 Effective length of database: 70,788,284 Effective search space: 7786711240 Effective search space used: 7786711240 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
