ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58f05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK101954:Os08g0503800 | 642 | 0.0 | 2 | AJ621918:Os08g0503800 | 518 | e-147 | 3 | AK119583:Os02g0135500 | 32 | 1.1 | 4 | AK065605:Os02g0135500 | 32 | 1.1 | 5 | AK120494:Os02g0761600 | 31 | 2.4 | 6 | AK122178:Os06g0106800 | 31 | 3.1 | 7 | AK105911:Os06g0106800 | 31 | 3.1 | 8 | AK105782:Os06g0106800 | 31 | 3.1 | 9 | AK105650:Os06g0106800 | 31 | 3.1 | 10 | AK073364:Os06g0106800 | 31 | 3.1 | 11 | AK071683:Os08g0561500 | 31 | 3.1 | 12 | Os05g0352700:Os05g0352700 | 30 | 4.0 | 13 | AK100101:Os08g0492100 | 30 | 4.0 | 14 | AK102441:Os06g0475400 | 30 | 6.9 | 15 | AK073417:Os07g0508000 | 30 | 6.9 | 16 | AK071568:Os06g0707200 | 30 | 6.9 | 17 | AK067055:Os02g0644600 | 30 | 6.9 | 18 | AK059411:Os06g0707200 | 30 | 6.9 | 19 | Os01g0118600:Os01g0118600 | 29 | 9.0 | 20 | Os01g0118400:Os01g0118400 | 29 | 9.0 | 21 | AK104359:Os04g0530500 | 29 | 9.0 | 22 | AK070732:Os04g0530500 | 29 | 9.0 |
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>AK101954:Os08g0503800 | Length = 533 Score = 642 bits (1655), Expect = 0.0 Identities = 317/371 (85%), Positives = 342/371 (92%) Frame = +1 Query: 184 MSRGGEPIDQVMGRKEEEELPRYESGALVVEGGAAGKRGPLVEPGFLDAHMPTNGIGTHT 363 MSRGGEP+DQVMGR EEEELP+YE GAL VE AA + GPLVE GFLDA++PT GIG HT Sbjct: 166 MSRGGEPLDQVMGRAEEEELPKYEPGALQVEA-AAKRTGPLVEAGFLDAYVPTGGIGMHT 224 Query: 364 MRALLDSARVVPPGELHCSQWVEEPTLLVTRFEYANLFHTITDWYSAYVSSRVTNLPDRP 543 MR+LLDS RVVPPGELHCSQWVEEPTLLVTRFEYANLFHTITDWYSAYVSSRVT+LP+RP Sbjct: 225 MRSLLDSGRVVPPGELHCSQWVEEPTLLVTRFEYANLFHTITDWYSAYVSSRVTDLPNRP 284 Query: 544 NVVFVDGHCKAPLEQTWEALFSNVTYIKSFSGPVCFRRAVLSPLGYETALFKGLSESFSC 723 NVVFVDGHCKA LEQTWEALFSNVTY+K+FSGPVCFR A+LSPLGYETALFKGLSESFSC Sbjct: 285 NVVFVDGHCKAQLEQTWEALFSNVTYVKNFSGPVCFRHAILSPLGYETALFKGLSESFSC 344 Query: 724 EGASAQSLRNRPDHQKTARLSEFGEMIIASFDLLEDGIVPSKKTSTGLKVLFVRREDYLA 903 EGASA+SLR +PDHQKTARLSEFGEMI+ASFDLL D I+ S KTS GL VLFVRREDYLA Sbjct: 345 EGASAESLREKPDHQKTARLSEFGEMILASFDLLRDDIL-SSKTSNGLNVLFVRREDYLA 403 Query: 904 HPRHSGKVESRLSNEQEVFGAVEKWAKKGQKCKINVVNGLFAHMSMKEQLQAILEASVII 1083 HPRHSGKVESRLSNE+EV+ A+E WA KGQKCKINV+NGLFAHM+MKEQL+AI EASV+I Sbjct: 404 HPRHSGKVESRLSNEKEVYDAIEGWA-KGQKCKINVINGLFAHMNMKEQLRAIQEASVVI 462 Query: 1084 GAHGAGLTHLVSATPDTKVLEIISSFYRRPHFALISHWKALEYHAINLPGSYASIPDVTS 1263 GAHGAGLTHLVSATPDTKVLEIISS YRRPHFALISHWK+LEYHAINLPGSYA + DV + Sbjct: 463 GAHGAGLTHLVSATPDTKVLEIISSMYRRPHFALISHWKSLEYHAINLPGSYARVTDVIN 522 Query: 1264 ELSNILKGLGC 1296 ELSNILKG GC Sbjct: 523 ELSNILKGFGC 533
>AJ621918:Os08g0503800 | Length = 289 Score = 518 bits (1334), Expect = e-147 Identities = 254/291 (87%), Positives = 273/291 (93%) Frame = +1 Query: 424 WVEEPTLLVTRFEYANLFHTITDWYSAYVSSRVTNLPDRPNVVFVDGHCKAPLEQTWEAL 603 WVEEPTLLVTRFEYANLFHTITDWYSAYVSSRVT+LP+RPNVVFVDGHCKA LEQTWEAL Sbjct: 1 WVEEPTLLVTRFEYANLFHTITDWYSAYVSSRVTDLPNRPNVVFVDGHCKAQLEQTWEAL 60 Query: 604 FSNVTYIKSFSGPVCFRRAVLSPLGYETALFKGLSESFSCEGASAQSLRNRPDHQKTARL 783 FSNVTY+K+FSGPVCFR A+LSPLGYETALFKGLSESFSCEGASA+SLR +PDHQKTARL Sbjct: 61 FSNVTYVKNFSGPVCFRHAILSPLGYETALFKGLSESFSCEGASAESLREKPDHQKTARL 120 Query: 784 SEFGEMIIASFDLLEDGIVPSKKTSTGLKVLFVRREDYLAHPRHSGKVESRLSNEQEVFG 963 SEFGEMI+ASFDLL D I+ S KTS GL VLFVRREDYLAHPRHSGKVESRLSNE+EV+ Sbjct: 121 SEFGEMILASFDLLRDDIL-SSKTSNGLNVLFVRREDYLAHPRHSGKVESRLSNEKEVYD 179 Query: 964 AVEKWAKKGQKCKINVVNGLFAHMSMKEQLQAILEASVIIGAHGAGLTHLVSATPDTKVL 1143 A+E WA KGQKCKINV+NGLFAHM+MKEQL+AI EASV+IGAHGAGLTHLVSATPDTKVL Sbjct: 180 AIEGWA-KGQKCKINVINGLFAHMNMKEQLRAIQEASVVIGAHGAGLTHLVSATPDTKVL 238 Query: 1144 EIISSFYRRPHFALISHWKALEYHAINLPGSYASIPDVTSELSNILKGLGC 1296 EIISS YRRPHFALISHWK+LEYHAINLPGSYA + DV +ELSNILKG GC Sbjct: 239 EIISSMYRRPHFALISHWKSLEYHAINLPGSYARVTDVINELSNILKGFGC 289
>AK119583:Os02g0135500 | Length = 485 Score = 32.3 bits (72), Expect = 1.1 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +1 Query: 1030 HMSMKEQLQAILEASVIIGAHGAGLTHLVSATPDTKVLEII 1152 H M Q + A V+IG HGAGLT++V +++++ Sbjct: 353 HTDMSTFAQLVNSADVMIGVHGAGLTNMVFLPRGAVLIQVV 393
>AK065605:Os02g0135500 | Length = 485 Score = 32.3 bits (72), Expect = 1.1 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +1 Query: 1030 HMSMKEQLQAILEASVIIGAHGAGLTHLVSATPDTKVLEII 1152 H M Q + A V+IG HGAGLT++V +++++ Sbjct: 353 HTDMSTFAQLVNSADVMIGVHGAGLTNMVFLPRGAVLIQVV 393
>AK120494:Os02g0761600 | Length = 330 Score = 31.2 bits (69), Expect = 2.4 Identities = 21/76 (27%), Positives = 31/76 (40%) Frame = +1 Query: 367 RALLDSARVVPPGELHCSQWVEEPTLLVTRFEYANLFHTITDWYSAYVSSRVTNLPDRPN 546 +A LD A+ PGEL C+ WV P+ F H + + N D+ + Sbjct: 249 QACLDQAKNARPGELRCNIWVYCPSEFGC-FSPDKYEHKHQECWLKQADHPKLNFKDKYS 307 Query: 547 VVFVDGHCKAPLEQTW 594 + D H AP+ W Sbjct: 308 ESYRDSHPTAPVVVPW 323
>AK122178:Os06g0106800 | Length = 499 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = -3 Query: 372 RSHGVRPDPVSGH--VGIEEPGLDQGPPLPRRAPLHHQRTG 256 R+ VRP V+GH VG+ + G Q PP R P H R G Sbjct: 325 RARRVRPGDVAGHHEVGVLDDGELQVPPGRRLRPQRHPRRG 365
>AK105911:Os06g0106800 | Length = 499 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = -3 Query: 372 RSHGVRPDPVSGH--VGIEEPGLDQGPPLPRRAPLHHQRTG 256 R+ VRP V+GH VG+ + G Q PP R P H R G Sbjct: 325 RARRVRPGDVAGHHEVGVLDDGELQVPPGRRLRPQRHPRRG 365
>AK105782:Os06g0106800 | Length = 499 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = -3 Query: 372 RSHGVRPDPVSGH--VGIEEPGLDQGPPLPRRAPLHHQRTG 256 R+ VRP V+GH VG+ + G Q PP R P H R G Sbjct: 325 RARRVRPGDVAGHHEVGVLDDGELQVPPGRRLRPQRHPRRG 365
>AK105650:Os06g0106800 | Length = 499 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = -3 Query: 372 RSHGVRPDPVSGH--VGIEEPGLDQGPPLPRRAPLHHQRTG 256 R+ VRP V+GH VG+ + G Q PP R P H R G Sbjct: 325 RARRVRPGDVAGHHEVGVLDDGELQVPPGRRLRPQRHPRRG 365
>AK073364:Os06g0106800 | Length = 499 Score = 30.8 bits (68), Expect = 3.1 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = -3 Query: 372 RSHGVRPDPVSGH--VGIEEPGLDQGPPLPRRAPLHHQRTG 256 R+ VRP V+GH VG+ + G Q PP R P H R G Sbjct: 325 RARRVRPGDVAGHHEVGVLDDGELQVPPGRRLRPQRHPRRG 365
>AK071683:Os08g0561500 | Length = 421 Score = 30.8 bits (68), Expect = 3.1 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = -3 Query: 357 RPDPVSGHVGIEEPGLDQGPPLPRRAPLHHQR 262 RPDP GH G+ P + P R LHH+R Sbjct: 299 RPDPGGGHHGLPHPRRELLPRRHHRRRLHHRR 330
>Os05g0352700:Os05g0352700 | Length = 1221 Score = 30.4 bits (67), Expect = 4.0 Identities = 18/50 (36%), Positives = 21/50 (42%) Frame = +3 Query: 978 GKKRSEVQNKCGEWSFCAHEHEGAAPGYPGSFSYNRGSWGWSDTPGFGHT 1127 G RS + G W C+ AA PG S R + WS PG G T Sbjct: 1044 GWLRSSLDRLSGSWRACSGSRAVAAVAAPGCSSSRRTTGSWS--PGTGST 1091
>AK100101:Os08g0492100 | Length = 436 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = -3 Query: 366 HGVRPDPVSGHVGIEEPGLDQGPPLPRRAPL 274 HGVR DP GH G++ G Q +PR PL Sbjct: 231 HGVREDPHEGHAGVQPGG--QHVVVPRPPPL 259
>AK102441:Os06g0475400 | Length = 534 Score = 29.6 bits (65), Expect = 6.9 Identities = 12/40 (30%), Positives = 25/40 (62%) Frame = +1 Query: 1033 MSMKEQLQAILEASVIIGAHGAGLTHLVSATPDTKVLEII 1152 +S++E + + V++GAHGAGLT+ + +L+++ Sbjct: 404 LSIEEFSRVVDSCDVLMGAHGAGLTNFFFLRTNAVMLQVV 443
>AK073417:Os07g0508000 | Length = 1280 Score = 29.6 bits (65), Expect = 6.9 Identities = 10/27 (37%), Positives = 13/27 (48%) Frame = +3 Query: 1032 HEHEGAAPGYPGSFSYNRGSWGWSDTP 1112 HEH + P ++ G W W DTP Sbjct: 216 HEHSSRSSRTPARSDWDSGRWEWEDTP 242
>AK071568:Os06g0707200 | Length = 460 Score = 29.6 bits (65), Expect = 6.9 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = +1 Query: 1030 HMSMKEQLQAILEASVIIGAHGAGLTHLVSATPDTKVLEII 1152 H M + + A V++G HGAGLT++V +++++ Sbjct: 328 HTDMPNFARLVNSADVMMGVHGAGLTNMVFLPSRAVLIQVV 368
>AK067055:Os02g0644600 | Length = 526 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 4/33 (12%) Frame = +1 Query: 517 RVTNLPDRPNV----VFVDGHCKAPLEQTWEAL 603 ++TNL +P+V V +DGH K L+Q WE + Sbjct: 375 QMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGI 407
>AK059411:Os06g0707200 | Length = 460 Score = 29.6 bits (65), Expect = 6.9 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = +1 Query: 1030 HMSMKEQLQAILEASVIIGAHGAGLTHLVSATPDTKVLEII 1152 H M + + A V++G HGAGLT++V +++++ Sbjct: 328 HTDMPNFARLVNSADVMMGVHGAGLTNMVFLPSRAVLIQVV 368
>Os01g0118600:Os01g0118600 | Length = 604 Score = 29.3 bits (64), Expect = 9.0 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 9/68 (13%) Frame = +1 Query: 1039 MKEQLQAILEASVIIGAHGAGLTH---------LVSATPDTKVLEIISSFYRRPHFALIS 1191 +K A+ V++G HGAGLT+ +V P ++ + ++FY P A+ Sbjct: 477 VKRFASAVNSCDVLVGVHGAGLTNQAFLPRGGVVVQIVPWGRMEWMATNFYGAPAAAM-- 534 Query: 1192 HWKALEYH 1215 + +EYH Sbjct: 535 ELRYVEYH 542
>Os01g0118400:Os01g0118400 | Length = 522 Score = 29.3 bits (64), Expect = 9.0 Identities = 13/48 (27%), Positives = 27/48 (56%) Frame = +1 Query: 1009 VVNGLFAHMSMKEQLQAILEASVIIGAHGAGLTHLVSATPDTKVLEII 1152 VVN S+++ + I ++G HGAGLT+++ P +++++ Sbjct: 383 VVNESDVGNSIEQVGKLINSCDALLGVHGAGLTNMMFLPPGATMVQVV 430
>AK104359:Os04g0530500 | Length = 253 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Frame = -3 Query: 1128 WCGRNQVCQTSPMSPYYN*SFQDSLELLLHAHVRKKTIHHIYFALLTF--FCPLLY 967 W R QV + MSP+Y + S H ++++H I+F L F C LL+ Sbjct: 198 WAFRGQVPPSMFMSPHYVTAHNMSSRARRHQMEVERSLHQIWFFLFVFVVLCLLLF 253
>AK070732:Os04g0530500 | Length = 253 Score = 29.3 bits (64), Expect = 9.0 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Frame = -3 Query: 1128 WCGRNQVCQTSPMSPYYN*SFQDSLELLLHAHVRKKTIHHIYFALLTF--FCPLLY 967 W R QV + MSP+Y + S H ++++H I+F L F C LL+ Sbjct: 198 WAFRGQVPPSMFMSPHYVTAHNMSSRARRHQMEVERSLHQIWFFLFVFVVLCLLLF 253 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 50,005,687 Number of extensions: 1200796 Number of successful extensions: 3633 Number of sequences better than 10.0: 22 Number of HSP's gapped: 3626 Number of HSP's successfully gapped: 22 Length of query: 573 Length of database: 15,399,855 Length adjustment: 106 Effective length of query: 467 Effective length of database: 11,155,509 Effective search space: 5209622703 Effective search space used: 5209622703 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
