ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58f05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AM179853.1| Hordeum vulgare mRNA for Beta-1,2-xylosyltransferase (xt1 gene) Length = 1942 Score = 2738 bits (1381), Expect = 0.0 Identities = 1490/1527 (97%), Gaps = 10/1527 (0%) Strand = Plus / Plus Query: 163 ctcgacccggcgctcatggcgatgtcgcgcggcggcgagccgatcgaccaggtgatgggc 222 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 425 ctcgacccggcgctcatggcgatgtcgcgcggcggcgagccgctcgaccaggtgatgggc 484 Query: 223 cgcaaggaggaggaggagctgcccaggtacgaatccggtgcgctggtggtggaggggggc 282 ||| ||||||||||||||||||| |||||| |||| |||||| |||||||| || Sbjct: 485 cgcgccgaggaggaggagctgcccaagtacgagcccggcgcgctgcaggtggaggcgg-- 542 Query: 283 gcggcggggaagagggggcccttggtcgagcccgggttcctcgatgcccacatgcccact 342 ||||| || ||||||||||||||||||||| ||||||||||| |||||| ||||||| Sbjct: 543 -cggcgaagaggagggggcccttggtcgagccggggttcctcgacgcccacgtgcccacc 601 Query: 343 aacgggatcgggacgcacaccatgagagcgctgctcgactccgcgcgtgtcgtgccgccc 402 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 602 aacgggatcgggatgcacaccatgagagcgctgctcgactccgcgcgtgtcgtgccgccc 661 Query: 403 ggtgagctccactgctcccagtgggttgaagaaccaacacttctggtcacacgatttgag 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 ------ctccactgctcccagtgggttgaagaaccaacacttctggtcacacgatttgag 715 Query: 463 tatgcaaaccttttccacacaattacagactggtacagtgcatatgttagttccagagtc 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 tatgcaaaccttttccacacaattacagactggtacagtgcatatgttagttccagagtc 775 Query: 523 acgaatttacctgaccgtcctaatgttgttttcgtggatggtcattgcaaggcaccactg 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 acgaatttacctgaccgtcctaatgttgttttcgtggatggtcattgcaaggcaccactg 835 Query: 583 gagcaaacatgggaagcacttttttcgaatgtgacctatatcaagagcttctctggccct 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 gagcaaacatgggaagcacttttttcgaatgtgacctatatcaagagcttctctggccct 895 Query: 643 gtttgtttccggcgtgcagttctttcaccattgggctacgagactgctctatttaagggg 702 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 896 gtttgtttccggcgtgcagttctttcaccattgggctacgagactgctctatttaagggg 955 Query: 703 cttagcgaaagcttcagctgtgaaggagcctcagctcagtcccttagaaatagaccggac 762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 956 cttagcgaaagcttcagctgtgaaggagcctcagctcagtcccttagaaatagaccggac 1015 Query: 763 caccagaaaactgcacggttgtctgaatttggggagatgattatagcttcttttgatctt 822 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1016 caccagaaaactgcacggttgtctgaatttggggagatgattatagcttcttttgatctt 1075 Query: 823 ctggaggatgggatcgtgccgtctaaaaagacatcaactgggctcaaggttctctttgtt 882 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1076 ctggaggatgggatcgtgccgtctaaaaagacatcaactgggctcaaggttctctttgtt 1135 Query: 883 cggagggaagattacttggcccacccacgtcacagtgggaaggttgaatctaggctaagc 942 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1136 cggagggaagattacttggcccacccacgtcacagtgggaaggttgaatctaggctaagc 1195 Query: 943 aatgagcaggaggtattcggtgcagtagagaagtgggcnnnnnnnggtcagaagtgcaaa 1002 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1196 aatgagcaggaggtattcggtgcagtagagaagtgggcaaaaaaaggtcagaagtgcaaa 1255 Query: 1003 ataaatgtggtgaatggtctttttgcgcacatgagcatgaaggagcagctccaggctatc 1062 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1256 ataaatgtggtgaatggtctttttgcgcacatgagcatgaaggagcagctccaggctatc 1315 Query: 1063 ctggaagcttcagttataataggggctcatggggctggtctgacacacctggtttcggcc 1122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1316 ctggaagcttcagttataataggggctcatggggctggtctgacacacctggtttcggcc 1375 Query: 1123 acaccagacacaaaagttcttgagataatcagcagcttctatcggcgcccacattttgcc 1182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1376 acaccagacacaaaagttcttgagataatcagcagcttctatcggcgcccacattttgcc 1435 Query: 1183 ttgatctcacactggaaggcattggaatatcatgccataaatctccctggatcatatgca 1242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1436 ttgatctcacactggaaggcattggaatatcatgccataaatctccctggatcatatgca 1495 Query: 1243 agtatcccagatgttaccagtgagttgagcaatatactgaaaggtctcggatgctgacac 1302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1496 agtatcccagatgttaccagtgagttgagcaatatactgaaaggtctcggatgctgacac 1555 Query: 1303 ggaggtattttcttagcgttgaggcattcatcgtgaaaatcgccgcgagcattgttgagt 1362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1556 ggaggtattttcttagcgttgaggcattcatcgtgaaaatcgccgcgagcattgttgagt 1615 Query: 1363 ggataattctgtttggttgatatacactggtcgcgctagccacgcccatgcttgcagttt 1422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1616 ggataattctgtttggttgatatacactggtcgcgctagccacgcccatgcttgcagttt 1675 Query: 1423 cagttggagatcagtctcccctggttgttcattcaattcaatcacgcccgtggtctagga 1482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1676 cagttggagatcagtctcccctggttgttcattcaattcaatcacgcccgtggtctagga 1735 Query: 1483 gccacacagcccctttcctccgcagaggaattttctgctgccagatgtagaacgatattc 1542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1736 gccacacagcccctttcctccgcagaggaattttctgctgccagatgtagaacgatattc 1795 Query: 1543 cgctgacaagctactgatgacatgaagaaacccaattgacactgtccattccgttctctc 1602 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1796 cgctgacaagctactgatgacatgaagaaacccaattgacactgtccattccgttctctc 1855 Query: 1603 gacgtgttcgccacggt-cctgcagatagatcaaactgtaattgtaattttatagtttgg 1661 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1856 gacgtgttcgccacggtncctgcagatggatcaaactgtaattgtaattttatagtttgg 1915 Query: 1662 gcttgaacgtttttgtgttgcaatgtg 1688 ||||||||||||||||||||||||||| Sbjct: 1916 gcttgaacgtttttgtgttgcaatgtg 1942 Score = 289 bits (146), Expect = 2e-74 Identities = 146/146 (100%) Strand = Plus / Plus Query: 18 gcggagcgcactccggcggccggcgatgatggccgggcgcaatcaccaccaaagccacgg 77 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcggagcgcactccggcggccggcgatgatggccgggcgcaatcaccaccaaagccacgg 60 Query: 78 ccagagactccgtcgcctcatcccgtgcatcctcgtcgtcgtgttcgccgtccacgccgt 137 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccagagactccgtcgcctcatcccgtgcatcctcgtcgtcgtgttcgccgtccacgccgt 120 Query: 138 ctccttcgctctctacctcctcctcc 163 |||||||||||||||||||||||||| Sbjct: 121 ctccttcgctctctacctcctcctcc 146
>emb|AJ864704.1| Saccharum officinarum mRNA for beta-2-xylosyltransferase (xt1 gene) Length = 1916 Score = 2438 bits (1230), Expect = 0.0 Identities = 1262/1275 (98%) Strand = Plus / Plus Query: 345 cgggatcgggacgcacaccatgagagcgctgctcgactccgcgcgtgtcgtgccgcccgg 404 ||||||| ||| |||||| ||||| |||||||||||||||||||| |||||||||||||| Sbjct: 642 cgggatcaggatgcacactatgagggcgctgctcgactccgcgcgcgtcgtgccgcccgg 701 Query: 405 tgagctccactgctcccagtgggttgaagaaccaacacttctggtcacacgatttgagta 464 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 702 tgagctccactgctcccagtgggttgaagaaccgacacttctggtcacacgatttgagta 761 Query: 465 tgcaaaccttttccacacaattacagactggtacagtgcatatgttagttccagagtcac 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 tgcaaaccttttccacacaattacagactggtacagtgcatatgttagttccagagtcac 821 Query: 525 gaatttacctgaccgtcctaatgttgttttcgtggatggtcattgcaaggcaccactgga 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 gaatttacctgaccgtcctaatgttgttttcgtggatggtcattgcaaggcaccactgga 881 Query: 585 gcaaacatgggaagcacttttttcgaatgtgacctatatcaagagcttctctggccctgt 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 882 gcaaacatgggaagcacttttttcgaatgtgacctatatcaagagcttctctggccctgt 941 Query: 645 ttgtttccggcgtgcagttctttcaccattgggctacgagactgctctatttaaggggct 704 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 942 ttgtttccggcgtgcagttctttcaccattgggctacgagactgctctatttaaggggct 1001 Query: 705 tagcgaaagcttcagctgtgaaggagcctcagctcagtcccttagaaatagaccggacca 764 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1002 tagcgaaagcttcagctgtgaaggagcctcagctcagtcccttagaaatagaccggacca 1061 Query: 765 ccagaaaactgcacggttgtctgaatttggggagatgattatagcttcttttgatcttct 824 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1062 ccagaaaactgcacggttgtctgaatttggggagatgattatagcttcttttgatcttct 1121 Query: 825 ggaggatgggatcgtgccgtctaaaaagacatcaactgggctcaaggttctctttgttcg 884 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1122 ggaggatgggatcgtgccgtctaaaaagacatcaactgggctcaaggttctctttgttcg 1181 Query: 885 gagggaagattacttggcccacccacgtcacagtgggaaggttgaatctaggctaagcaa 944 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1182 gagggaagattacttggcccacccacgtcacagtgggaaggttgaatctaggctaagcaa 1241 Query: 945 tgagcaggaggtattcggtgcagtagagaagtgggcnnnnnnnggtcagaagtgcaaaat 1004 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1242 tgagcaggaggtattcggtgcagtagagaagtgggcaaaaaaaggtcagaagtgcaaaat 1301 Query: 1005 aaatgtggtgaatggtctttttgcgcacatgagcatgaaggagcagctccaggctatcct 1064 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1302 aaatgtggtgaatggtctttttgcgcacatgagcatgaaggagcagctccaggctatcct 1361 Query: 1065 ggaagcttcagttataataggggctcatggggctggtctgacacacctggtttcggccac 1124 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1362 ggaagcttcagttataataggggctcatggggctggtctgacacacctggtttcggccac 1421 Query: 1125 accagacacaaaagttcttgagataatcagcagcttctatcggcgcccacattttgcctt 1184 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1422 accagacacaaaagttcttgagataatcagcagcttctatcggcgcccacattttgcctt 1481 Query: 1185 gatctcacactggaaggcattggaatatcatgccataaatctccctggatcatatgcaag 1244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1482 gatctcacactggaaggcattggaatatcatgccataaatctccctggatcatatgcaag 1541 Query: 1245 tatcccagatgttaccagtgagttgagcaatatactgaaaggtctcggatgctgacacgg 1304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1542 tatcccagatgttaccagtgagttgagcaatatactgaaaggtctcggatgctgacacgg 1601 Query: 1305 aggtattttcttagcgttgaggcattcatcgtgaaaatcgccgcgagcattgttgagtgg 1364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1602 aggtattttcttagcgttgaggcattcatcgtgaaaatcgccgcgagcattgttgagtgg 1661 Query: 1365 ataattctgtttggttgatatacactggtcgcgctagccacgcccatgcttgcagtttca 1424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1662 ataattctgtttggttgatatacactggtcgcgctagccacgcccatgcttgcagtttca 1721 Query: 1425 gttggagatcagtctcccctggttgttcattcaattcaatcacgcccgtggtctaggagc 1484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1722 gttggagatcagtctcccctggttgttcattcaattcaatcacgcccgtggtctaggagc 1781 Query: 1485 cacacagcccctttcctccgcagaggaattttctgctgccagatgtagaacgatattccg 1544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1782 cacacagcccctttcctccgcagaggaattttctgctgccagatgtagaacgatattccg 1841 Query: 1545 ctgacaagctactgatgacatgaagaaacccaattgacactgtccattccgttctctcga 1604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1842 ctgacaagctactgatgacatgaagaaacccaattgacactgtccattccgttctctcga 1901 Query: 1605 cgtgttcgccacggt 1619 ||||||||||||||| Sbjct: 1902 cgtgttcgccacggt 1916 Score = 97.6 bits (49), Expect = 1e-16 Identities = 79/89 (88%) Strand = Plus / Plus Query: 166 gacccggcgctcatggcgatgtcgcgcggcggcgagccgatcgaccaggtgatgggccgc 225 |||||||||||||| |||||||| |||||||| |||||| | || ||||||||||||||| Sbjct: 463 gacccggcgctcatcgcgatgtcccgcggcggggagccgctggagcaggtgatgggccgc 522 Query: 226 aaggaggaggaggagctgcccaggtacga 254 ||||||||||||||||||| |||||| Sbjct: 523 gccgaggaggaggagctgcccaagtacga 551 Score = 69.9 bits (35), Expect = 3e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 85 ctccgtcgcctcatcccgtgcatcctcgtcgtcgtgttcgccgtccacgccgtctccttc 144 ||||| |||||||||||| | ||||| || |||| ||||||||| |||||| ||||||| Sbjct: 85 ctccgccgcctcatcccgcggctcctcctcctcgtcttcgccgtctacgccgcctccttc 144 Query: 145 gctctctacctcctcctcc 163 || ||||||||||||||| Sbjct: 145 gcgatctacctcctcctcc 163
>ref|NM_001068712.1| Oryza sativa (japonica cultivar-group) Os08g0503800 (Os08g0503800) mRNA, complete cds Length = 2105 Score = 674 bits (340), Expect = 0.0 Identities = 683/796 (85%), Gaps = 6/796 (0%) Strand = Plus / Plus Query: 163 ctcgacccggcgctcatggcgatgtcgcgcggcggcgagccgatcgaccaggtgatgggc 222 |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 568 ctcgacccggggctcatcgcgatgtcgcgcggcggcgagccgctcgaccaggtgatgggc 627 Query: 223 cgcaaggaggaggaggagctgcccaggtacgaatccggtgcgctggtggtggaggggggc 282 ||| ||||||||||||||||||| |||||| |||| |||||| |||||||| || Sbjct: 628 cgcgccgaggaggaggagctgcccaagtacgagcccggcgcgctgcaggtggaggcgg-- 685 Query: 283 gcggcggggaagagggggcccttggtcgagcccgggttcctcgatgcccacatgcccact 342 ||||| || || |||||| ||||| || | ||||||||||| ||| || ||||||| Sbjct: 686 -cggcgaagaggacggggccgttggtggaagcggggttcctcgacgcctacgtgcccacc 744 Query: 343 aacgggatcgggacgcacaccatgagagcgctgctcgactccgcgcgtgtcgtgccgccc 402 ||||||||||| |||||| ||||| ||||||||||||| | ||| |||||||||||| Sbjct: 745 ggcgggatcgggatgcacacgatgaggtcgctgctcgactcggggcgcgtcgtgccgccc 804 Query: 403 ggtgagctccactgctcccagtgggttgaagaaccaacacttctggtcacacgatttgag 462 || ||||| |||||||| |||||||||||||||||||||||||| || || || ||||| Sbjct: 805 ggcgagctacactgctcgcagtgggttgaagaaccaacacttctagtaactcgttttgaa 864 Query: 463 tatgcaaaccttttccacacaattacagactggtacagtgcatatgttagttccagagtc 522 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 865 tatgcaaaccttttccacacaattacggactggtacagtgcatatgtcagttccagagtc 924 Query: 523 acgaatttacctgaccgtcctaatgttgttttcgtggatggtcattgcaaggcaccactg 582 ||| |||||||| |||| |||||||| || || |||||||| ||||||||||||| |||| Sbjct: 925 acggatttacctaaccgccctaatgtggtctttgtggatggacattgcaaggcacaactg 984 Query: 583 gagcaaacatgggaagcacttttttcgaatgtgacctatatcaagagcttctctggccct 642 ||||||||||||||||||||||| || |||||||| ||| | |||| |||||||||||| Sbjct: 985 gagcaaacatgggaagcacttttctcaaatgtgacatatgttaagaatttctctggccct 1044 Query: 643 gtttgtttccggcgtgcagttctttcaccattgggctacgagactgctctatttaagggg 702 |||||||| || | |||| ||||||||||||||||||| |||||||| ||||||||||| Sbjct: 1045 gtttgttttcgacatgcaattctttcaccattgggctatgagactgcgctatttaagggc 1104 Query: 703 cttagcgaaagcttcagctgtgaaggagcctcagctcagtcccttagaaatagaccggac 762 ||||| || ||||| ||||| ||||| || || || ||||||| ||| | | || || Sbjct: 1105 cttagtgagagctttagctgcgaaggtgcttctgcggagtccctcagagaaaagcctgat 1164 Query: 763 caccagaaaactgcacggttgtctgaatttggggagatgattatagcttcttttgatctt 822 ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 1165 caccagaaaacggcaaggttgtctgaatttggtgagatgattttagcttcttttgatctt 1224 Query: 823 ctggaggatgggatcgtgccgtctaaaaagacatcaactgggctcaaggttctctttgtt 882 ||| ||||| || || | || ||| ||||||| ||||||||| |||||||||||| Sbjct: 1225 ctgagggatgacatactgtcatccaaa---acatcaaatgggctcaatgttctctttgtt 1281 Query: 883 cggagggaagattacttggcccacccacgtcacagtgggaaggttgaatctaggctaagc 942 ||| | || || ||||||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 1282 cggcgagaggactacttggcccatccacgccacagtggaaaggttgaatctagactaagc 1341 Query: 943 aatgagcaggaggtat 958 |||||| ||||||||| Sbjct: 1342 aatgagaaggaggtat 1357 Score = 278 bits (140), Expect = 6e-71 Identities = 269/312 (86%) Strand = Plus / Plus Query: 988 ggtcagaagtgcaaaataaatgtggtgaatggtctttttgcgcacatgagcatgaaggag 1047 |||||||| |||||||||||||| | |||||||||||||| ||||||| |||||||||| Sbjct: 1384 ggtcagaaatgcaaaataaatgtcatcaatggtctttttgcccacatgaacatgaaggag 1443 Query: 1048 cagctccaggctatcctggaagcttcagttataataggggctcatggggctggtctgaca 1107 || || | ||||| | |||||||||||| |||||||||| |||||||||||||| || Sbjct: 1444 caactgcgtgctatacaggaagcttcagtagtaataggggcacatggggctggtctaact 1503 Query: 1108 cacctggtttcggccacaccagacacaaaagttcttgagataatcagcagcttctatcgg 1167 ||| ||||||| || || ||||| |||||||| ||||| || ||||||||| | ||||| Sbjct: 1504 cacttggtttcagctaccccagatacaaaagtccttgaaatcatcagcagcatgtatcga 1563 Query: 1168 cgcccacattttgccttgatctcacactggaaggcattggaatatcatgccataaatctc 1227 |||||||||||||| |||||||||||||||||| || || |||||||||||||||||| Sbjct: 1564 cgcccacattttgcattgatctcacactggaagagcttagagtatcatgccataaatctc 1623 Query: 1228 cctggatcatatgcaagtatcccagatgttaccagtgagttgagcaatatactgaaaggt 1287 ||||||||||||||||| | ||||||||| || ||||||||| ||||||||||||||| Sbjct: 1624 cctggatcatatgcaagggtaacagatgttatcaatgagttgagtaatatactgaaaggt 1683 Query: 1288 ctcggatgctga 1299 | ||||||||| Sbjct: 1684 tttggatgctga 1695
>dbj|AK101954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075J17, full insert sequence Length = 2106 Score = 674 bits (340), Expect = 0.0 Identities = 683/796 (85%), Gaps = 6/796 (0%) Strand = Plus / Plus Query: 163 ctcgacccggcgctcatggcgatgtcgcgcggcggcgagccgatcgaccaggtgatgggc 222 |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 569 ctcgacccggggctcatcgcgatgtcgcgcggcggcgagccgctcgaccaggtgatgggc 628 Query: 223 cgcaaggaggaggaggagctgcccaggtacgaatccggtgcgctggtggtggaggggggc 282 ||| ||||||||||||||||||| |||||| |||| |||||| |||||||| || Sbjct: 629 cgcgccgaggaggaggagctgcccaagtacgagcccggcgcgctgcaggtggaggcgg-- 686 Query: 283 gcggcggggaagagggggcccttggtcgagcccgggttcctcgatgcccacatgcccact 342 ||||| || || |||||| ||||| || | ||||||||||| ||| || ||||||| Sbjct: 687 -cggcgaagaggacggggccgttggtggaagcggggttcctcgacgcctacgtgcccacc 745 Query: 343 aacgggatcgggacgcacaccatgagagcgctgctcgactccgcgcgtgtcgtgccgccc 402 ||||||||||| |||||| ||||| ||||||||||||| | ||| |||||||||||| Sbjct: 746 ggcgggatcgggatgcacacgatgaggtcgctgctcgactcggggcgcgtcgtgccgccc 805 Query: 403 ggtgagctccactgctcccagtgggttgaagaaccaacacttctggtcacacgatttgag 462 || ||||| |||||||| |||||||||||||||||||||||||| || || || ||||| Sbjct: 806 ggcgagctacactgctcgcagtgggttgaagaaccaacacttctagtaactcgttttgaa 865 Query: 463 tatgcaaaccttttccacacaattacagactggtacagtgcatatgttagttccagagtc 522 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 866 tatgcaaaccttttccacacaattacggactggtacagtgcatatgtcagttccagagtc 925 Query: 523 acgaatttacctgaccgtcctaatgttgttttcgtggatggtcattgcaaggcaccactg 582 ||| |||||||| |||| |||||||| || || |||||||| ||||||||||||| |||| Sbjct: 926 acggatttacctaaccgccctaatgtggtctttgtggatggacattgcaaggcacaactg 985 Query: 583 gagcaaacatgggaagcacttttttcgaatgtgacctatatcaagagcttctctggccct 642 ||||||||||||||||||||||| || |||||||| ||| | |||| |||||||||||| Sbjct: 986 gagcaaacatgggaagcacttttctcaaatgtgacatatgttaagaatttctctggccct 1045 Query: 643 gtttgtttccggcgtgcagttctttcaccattgggctacgagactgctctatttaagggg 702 |||||||| || | |||| ||||||||||||||||||| |||||||| ||||||||||| Sbjct: 1046 gtttgttttcgacatgcaattctttcaccattgggctatgagactgcgctatttaagggc 1105 Query: 703 cttagcgaaagcttcagctgtgaaggagcctcagctcagtcccttagaaatagaccggac 762 ||||| || ||||| ||||| ||||| || || || ||||||| ||| | | || || Sbjct: 1106 cttagtgagagctttagctgcgaaggtgcttctgcggagtccctcagagaaaagcctgat 1165 Query: 763 caccagaaaactgcacggttgtctgaatttggggagatgattatagcttcttttgatctt 822 ||||||||||| ||| |||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 1166 caccagaaaacggcaaggttgtctgaatttggtgagatgattttagcttcttttgatctt 1225 Query: 823 ctggaggatgggatcgtgccgtctaaaaagacatcaactgggctcaaggttctctttgtt 882 ||| ||||| || || | || ||| ||||||| ||||||||| |||||||||||| Sbjct: 1226 ctgagggatgacatactgtcatccaaa---acatcaaatgggctcaatgttctctttgtt 1282 Query: 883 cggagggaagattacttggcccacccacgtcacagtgggaaggttgaatctaggctaagc 942 ||| | || || ||||||||||| ||||| |||||||| |||||||||||||| |||||| Sbjct: 1283 cggcgagaggactacttggcccatccacgccacagtggaaaggttgaatctagactaagc 1342 Query: 943 aatgagcaggaggtat 958 |||||| ||||||||| Sbjct: 1343 aatgagaaggaggtat 1358 Score = 278 bits (140), Expect = 6e-71 Identities = 269/312 (86%) Strand = Plus / Plus Query: 988 ggtcagaagtgcaaaataaatgtggtgaatggtctttttgcgcacatgagcatgaaggag 1047 |||||||| |||||||||||||| | |||||||||||||| ||||||| |||||||||| Sbjct: 1385 ggtcagaaatgcaaaataaatgtcatcaatggtctttttgcccacatgaacatgaaggag 1444 Query: 1048 cagctccaggctatcctggaagcttcagttataataggggctcatggggctggtctgaca 1107 || || | ||||| | |||||||||||| |||||||||| |||||||||||||| || Sbjct: 1445 caactgcgtgctatacaggaagcttcagtagtaataggggcacatggggctggtctaact 1504 Query: 1108 cacctggtttcggccacaccagacacaaaagttcttgagataatcagcagcttctatcgg 1167 ||| ||||||| || || ||||| |||||||| ||||| || ||||||||| | ||||| Sbjct: 1505 cacttggtttcagctaccccagatacaaaagtccttgaaatcatcagcagcatgtatcga 1564 Query: 1168 cgcccacattttgccttgatctcacactggaaggcattggaatatcatgccataaatctc 1227 |||||||||||||| |||||||||||||||||| || || |||||||||||||||||| Sbjct: 1565 cgcccacattttgcattgatctcacactggaagagcttagagtatcatgccataaatctc 1624 Query: 1228 cctggatcatatgcaagtatcccagatgttaccagtgagttgagcaatatactgaaaggt 1287 ||||||||||||||||| | ||||||||| || ||||||||| ||||||||||||||| Sbjct: 1625 cctggatcatatgcaagggtaacagatgttatcaatgagttgagtaatatactgaaaggt 1684 Query: 1288 ctcggatgctga 1299 | ||||||||| Sbjct: 1685 tttggatgctga 1696
>emb|AJ621918.1| Oryza sativa (japonica cultivar-group) partial mRNA for beta-1,2-xylosyltransferase (xt gene) Length = 870 Score = 486 bits (245), Expect = e-133 Identities = 463/535 (86%), Gaps = 3/535 (0%) Strand = Plus / Plus Query: 424 tgggttgaagaaccaacacttctggtcacacgatttgagtatgcaaaccttttccacaca 483 ||||||||||||||||||||||| || || || ||||| ||||||||||||||||||||| Sbjct: 1 tgggttgaagaaccaacacttctagtaactcgttttgaatatgcaaaccttttccacaca 60 Query: 484 attacagactggtacagtgcatatgttagttccagagtcacgaatttacctgaccgtcct 543 ||||| |||||||||||||||||||| ||||||||||||||| |||||||| |||| ||| Sbjct: 61 attacggactggtacagtgcatatgtcagttccagagtcacggatttacctaaccgccct 120 Query: 544 aatgttgttttcgtggatggtcattgcaaggcaccactggagcaaacatgggaagcactt 603 ||||| || || |||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 121 aatgtggtctttgtggatggacattgcaaggcacaactggagcaaacatgggaagcactt 180 Query: 604 ttttcgaatgtgacctatatcaagagcttctctggccctgtttgtttccggcgtgcagtt 663 || || |||||||| ||| | |||| |||||||||||||||||||| || | |||| || Sbjct: 181 ttctcaaatgtgacatatgttaagaatttctctggccctgtttgttttcgacatgcaatt 240 Query: 664 ctttcaccattgggctacgagactgctctatttaaggggcttagcgaaagcttcagctgt 723 ||||||||||||||||| |||||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 241 ctttcaccattgggctatgagactgcgctatttaagggccttagtgagagctttagctgc 300 Query: 724 gaaggagcctcagctcagtcccttagaaatagaccggaccaccagaaaactgcacggttg 783 ||||| || || || ||||||| ||| | | || || ||||||||||| ||| ||||| Sbjct: 301 gaaggtgcttctgcggagtccctcagagaaaagcctgatcaccagaaaacggcaaggttg 360 Query: 784 tctgaatttggggagatgattatagcttcttttgatcttctggaggatgggatcgtgccg 843 ||||||||||| ||||||||| |||||||||||||||||||| ||||| || || | Sbjct: 361 tctgaatttggtgagatgattttagcttcttttgatcttctgagggatgacatactgtca 420 Query: 844 tctaaaaagacatcaactgggctcaaggttctctttgttcggagggaagattacttggcc 903 || ||| ||||||| ||||||||| ||||||||||||||| | || || ||||||||| Sbjct: 421 tccaaa---acatcaaatgggctcaatgttctctttgttcggcgagaggactacttggcc 477 Query: 904 cacccacgtcacagtgggaaggttgaatctaggctaagcaatgagcaggaggtat 958 || ||||| |||||||| |||||||||||||| |||||||||||| ||||||||| Sbjct: 478 catccacgccacagtggaaaggttgaatctagactaagcaatgagaaggaggtat 532 Score = 278 bits (140), Expect = 6e-71 Identities = 269/312 (86%) Strand = Plus / Plus Query: 988 ggtcagaagtgcaaaataaatgtggtgaatggtctttttgcgcacatgagcatgaaggag 1047 |||||||| |||||||||||||| | |||||||||||||| ||||||| |||||||||| Sbjct: 559 ggtcagaaatgcaaaataaatgtcatcaatggtctttttgcccacatgaacatgaaggag 618 Query: 1048 cagctccaggctatcctggaagcttcagttataataggggctcatggggctggtctgaca 1107 || || | ||||| | |||||||||||| |||||||||| |||||||||||||| || Sbjct: 619 caactgcgtgctatacaggaagcttcagtagtaataggggcacatggggctggtctaact 678 Query: 1108 cacctggtttcggccacaccagacacaaaagttcttgagataatcagcagcttctatcgg 1167 ||| ||||||| || || ||||| |||||||| ||||| || ||||||||| | ||||| Sbjct: 679 cacttggtttcagctaccccagatacaaaagtccttgaaatcatcagcagcatgtatcga 738 Query: 1168 cgcccacattttgccttgatctcacactggaaggcattggaatatcatgccataaatctc 1227 |||||||||||||| |||||||||||||||||| || || |||||||||||||||||| Sbjct: 739 cgcccacattttgcattgatctcacactggaagagcttagagtatcatgccataaatctc 798 Query: 1228 cctggatcatatgcaagtatcccagatgttaccagtgagttgagcaatatactgaaaggt 1287 ||||||||||||||||| | ||||||||| || ||||||||| ||||||||||||||| Sbjct: 799 cctggatcatatgcaagggtaacagatgttatcaatgagttgagtaatatactgaaaggt 858 Query: 1288 ctcggatgctga 1299 | ||||||||| Sbjct: 859 tttggatgctga 870
>emb|AM179854.1| Sorghum bicolor partial mRNA for Beta-1,2-xylosyltransferase (xt1 gene) Length = 1369 Score = 464 bits (234), Expect = e-127 Identities = 461/536 (86%), Gaps = 3/536 (0%) Strand = Plus / Plus Query: 421 cagtgggttgaagaaccaacacttctggtcacacgatttgagtatgcaaaccttttccac 480 ||||||||||||||||| ||||| ||||||| || ||||| ||||| |||||||||||| Sbjct: 490 cagtgggttgaagaaccgacactgttggtcactcgttttgaatatgcgaaccttttccac 549 Query: 481 acaattacagactggtacagtgcatatgttagttccagagtcacgaatttacctgaccgt 540 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 550 acaattacagactggtacagtgcatatgttagttccagagtcacgaatttaccaaaccgt 609 Query: 541 cctaatgttgttttcgtggatggtcattgcaaggcaccactggagcaaacatgggaagca 600 ||||||||| | ||||||||||| ||||||||||||| | ||||| |||||||||||||| Sbjct: 610 cctaatgttatattcgtggatgggcattgcaaggcacaattggaggaaacatgggaagca 669 Query: 601 cttttttcgaatgtgacctatatcaagagcttctctggccctgtttgtttccggcgtgca 660 ||||| || | |||||| ||| |||| |||||||| |||||||||||||| | ||| Sbjct: 670 cttttctcaagtgtgacatatgctaagaatttctctggtcctgtttgtttccgacatgcc 729 Query: 661 gttctttcaccattgggctacgagactgctctatttaaggggcttagcgaaagcttcagc 720 ||||||||||||||||||| |||||||| | |||||||| |||||||| ||||||||| Sbjct: 730 attctttcaccattgggctatgagactgccttgtttaagggccttagcgagagcttcagc 789 Query: 721 tgtgaaggagcctcagctcagtcccttagaaatagaccggaccaccagaaaactgcacgg 780 |||||||| ||||| || ||||||| || | | | ||||| | ||||||| ||||| Sbjct: 790 tgtgaaggtgcctccgcagagtccctccgagaaaaaacggactatgagaaaacatcacgg 849 Query: 781 ttgtctgaatttggggagatgattatagcttcttttgatcttctggaggatgggatcgtg 840 || |||||||| ||||| |||||| ||||||| |||||||||||| |||||| ||| || Sbjct: 850 ttatctgaattcggggaaatgattgtagcttcgtttgatcttctgcaggatgacatcatg 909 Query: 841 ccgtctaaaaagacatcaactgggctcaaggttctctttgttcggagggaagattacttg 900 | || ||||| ||||| ||||||||| ||||||||||||||| | ||||| |||||| Sbjct: 910 tcatccaaaaa---atcaaatgggctcaatgttctctttgttcggcgagaagactacttg 966 Query: 901 gcccacccacgtcacagtgggaaggttgaatctaggctaagcaatgagcaggaggt 956 |||||||| || |||||||| ||||||||||| || |||||||||||||||||||| Sbjct: 967 gcccacccccgccacagtggtaaggttgaatccagactaagcaatgagcaggaggt 1022 Score = 244 bits (123), Expect = 9e-61 Identities = 258/303 (85%) Strand = Plus / Plus Query: 997 tgcaaaataaatgtggtgaatggtctttttgcgcacatgagcatgaaggagcagctccag 1056 |||||| | ||||| || || ||||||||||| ||||||| |||||||||||| || | Sbjct: 1060 tgcaaagtgaatgtcgtcaacggtctttttgcccacatgaccatgaaggagcaactgcgt 1119 Query: 1057 gctatcctggaagcttcagttataataggggctcatggggctggtctgacacacctggtt 1116 |||||||||||||||||||| |||||||||||||||| || ||||| |||||| | ||| Sbjct: 1120 gctatcctggaagcttcagtggtaataggggctcatggagccggtctaacacacttagtt 1179 Query: 1117 tcggccacaccagacacaaaagttcttgagataatcagcagcttctatcggcgcccacat 1176 || || || || || ||||| ||||||||||| ||||||||| | || |||||||||||| Sbjct: 1180 tcagcaactcctgatacaaaggttcttgagattatcagcagcatgtaccggcgcccacat 1239 Query: 1177 tttgccttgatctcacactggaaggcattggaatatcatgccataaatctccctggatca 1236 ||||| ||||||||||||||||| | || || || |||||||||||||||||||| ||| Sbjct: 1240 tttgcactgatctcacactggaagtctttagagtaccatgccataaatctccctgggtca 1299 Query: 1237 tatgcaagtatcccagatgttaccagtgagttgagcaatatactgaaaggtctcggatgc 1296 | |||||| ||| |||||| | |||||||||||| || |||||| |||||||||||||| Sbjct: 1300 tttgcaaggatcacagatgccatcagtgagttgagaaaaatactggaaggtctcggatgc 1359 Query: 1297 tga 1299 ||| Sbjct: 1360 tga 1362 Score = 97.6 bits (49), Expect = 1e-16 Identities = 190/237 (80%) Strand = Plus / Plus Query: 166 gacccggcgctcatggcgatgtcgcgcggcggcgagccgatcgaccaggtgatgggccgc 225 |||||||||||||| |||||||| |||||||| ||||| | || ||||||||||||||| Sbjct: 241 gacccggcgctcatcgcgatgtcccgcggcggggagcctctggagcaggtgatgggccgc 300 Query: 226 aaggaggaggaggagctgcccaggtacgaatccggtgcgctggtggtggaggggggcgcg 285 ||||||||||||||||||| |||||| |||| |||||| ||| |||||| ||| Sbjct: 301 gccgaggaggaggagctgcccaagtacgagcccggcgcgctgcaggttgaggggccggcg 360 Query: 286 gcggggaagagggggcccttggtcgagcccgggttcctcgatgcccacatgcccactaac 345 ||||| | || | |||| |||| || | ||||||||| | | | || ||||||| | Sbjct: 361 gcgggtaggacagcgcccctggtggacgctgggttcctcaacgactacgtgcccaccggc 420 Query: 346 gggatcgggacgcacaccatgagagcgctgctcgactccgcgcgtgtcgtgccgccc 402 |||||||| | |||||| |||| ||||||||||| || ||||| || ||||||||| Sbjct: 421 gggatcggtatgcacactatgaaggcgctgctcgagtcagcgcgcgttgtgccgccc 477
>emb|AM179857.1| Zea mays mRNA for Beta-1,2-xylosyltransferase (xt1 gene) Length = 1574 Score = 448 bits (226), Expect = e-122 Identities = 483/569 (84%), Gaps = 6/569 (1%) Strand = Plus / Plus Query: 166 gacccggcgctcatggcgatgtcgcgcggcggcgagccgatcgaccaggtgatgggccgc 225 |||||||||||||| ||||||||||||||||| |||||| | || ||||||||||||||| Sbjct: 453 gacccggcgctcatcgcgatgtcgcgcggcggggagccgctggagcaggtgatgggccgc 512 Query: 226 aaggaggaggaggagctgcccaggtacgaatccggtgcgctggtggtggaggggggcgcg 285 |||||||||||||| |||| |||||| |||| |||||| |||||||||| ||| Sbjct: 513 gccgaggaggaggagctacccaagtacgagcccggcgcgctgcaggtggaggggccggcg 572 Query: 286 gcggggaagagggggcccttggtcgagcccgggttcctcgatgcccacatgcccactaac 345 ||||| | | || |||| |||| || | ||||||||| | | | || | ||||| | Sbjct: 573 gcgggtatgccggtgcccctggtggacgcagggttcctcaacgactacgtacccaccggc 632 Query: 346 gggatcgggacgcacaccatgagagcgctgctcgactccgcgcgtgtcgtgccgcccggt 405 |||||||||| |||||| ||||| ||||||||||| || |||| || ||||| |||| Sbjct: 633 gggatcgggatgcacactatgagggcgctgctcgagtcgacgcgcgttgtgccacccg-- 690 Query: 406 gagctccactgctcccagtgggttgaagaaccaacacttctggtcacacgatttgagtat 465 |||||||||||||||||||||||||||| ||||||| ||| || || ||||| ||| Sbjct: 691 ----tccactgctcccagtgggttgaagaacctacacttccggttactcgttttgaatat 746 Query: 466 gcaaaccttttccacacaattacagactggtacagtgcatatgttagttccagagtcacg 525 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 gcgagccttttccacacaattacagactggtacagtgcatatgttagttccagagtcacg 806 Query: 526 aatttacctgaccgtcctaatgttgttttcgtggatggtcattgcaaggcaccactggag 585 |||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| Sbjct: 807 aatttacctgaccgtcctaatgttgttttcgtggatggtcattgcaaggcacaattagag 866 Query: 586 caaacatgggaagcacttttttcgaatgtgacctatatcaagagcttctctggccctgtt 645 ||||||||||||||||||| || | |||||| ||| |||| |||| ||| |||||| Sbjct: 867 gaaacatgggaagcacttttctcaagtgtgacatatgctaagaacttcactgttcctgtt 926 Query: 646 tgtttccggcgtgcagttctttcaccattgggctacgagactgctctatttaaggggctt 705 |||||||| | ||| ||||||||||||||||||| |||||||| | |||||||| ||| Sbjct: 927 tgtttccgacatgccattctttcaccattgggctatgagactgccatgtttaagggtctt 986 Query: 706 agcgaaagcttcagctgtgaaggagcctc 734 ||||| ||||||||||||||||| ||||| Sbjct: 987 agcgagagcttcagctgtgaaggtgcctc 1015 Score = 260 bits (131), Expect = 1e-65 Identities = 260/303 (85%) Strand = Plus / Plus Query: 997 tgcaaaataaatgtggtgaatggtctttttgcgcacatgagcatgaaggagcagctccag 1056 |||||| | ||||| | ||| ||||||||||| ||||||| |||||||||||| |||| Sbjct: 1272 tgcaaagtgaatgtcgcgaacggtctttttgcccacatgaccatgaaggagcaactccgt 1331 Query: 1057 gctatcctggaagcttcagttataataggggctcatggggctggtctgacacacctggtt 1116 |||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| Sbjct: 1332 gctatcctggaagcttcagtggtaataggggctcatggggctggtctaacacacttggtt 1391 Query: 1117 tcggccacaccagacacaaaagttcttgagataatcagcagcttctatcggcgcccacat 1176 || || || || || ||||| ||||||||||| ||||||||| | || |||||||||||| Sbjct: 1392 tcagcaactcctgatacaaaggttcttgagattatcagcagcatgtaccggcgcccacat 1451 Query: 1177 tttgccttgatctcacactggaaggcattggaatatcatgccataaatctccctggatca 1236 ||||| | ||||||||||||||| | || || || |||||||||||||||||||||||| Sbjct: 1452 tttgcacttatctcacactggaagtctttagagtaccatgccataaatctccctggatca 1511 Query: 1237 tatgcaagtatcccagatgttaccagtgagttgagcaatatactgaaaggtctcggatgc 1296 | |||||| || ||||||| | || |||||||| || |||||| |||||||||||||| Sbjct: 1512 tttgcaagggtcacagatgtcatcaacgagttgagaaaaatactggaaggtctcggatgc 1571 Query: 1297 tga 1299 ||| Sbjct: 1572 tga 1574 Score = 147 bits (74), Expect = 2e-31 Identities = 160/188 (85%), Gaps = 3/188 (1%) Strand = Plus / Plus Query: 769 aaaactgcacggttgtctgaatttggggagatgattatagcttcttttgatcttctggag 828 |||||||||||||| |||||||| ||||| |||||| |||||||||||||||||||| || Sbjct: 1050 aaaactgcacggttatctgaattcggggaaatgattgtagcttcttttgatcttctgcag 1109 Query: 829 gatgggatcgtgccgtctaaaaagacatcaactgggctcaaggttctctttgttcggagg 888 |||| ||| || | || ||||| ||| | ||| ||||| |||||||||||||| | Sbjct: 1110 gatgacatcatgtcatccaaaaa---atcgaatggactcaatgttctctttgttcgacga 1166 Query: 889 gaagattacttggcccacccacgtcacagtgggaaggttgaatctaggctaagcaatgag 948 ||||| ||| |||||||||| || |||||||| ||||||||||| || |||||||||||| Sbjct: 1167 gaagactacctggcccacccgcgccacagtggtaaggttgaatcgagactaagcaatgag 1226 Query: 949 caggaggt 956 |||||||| Sbjct: 1227 caggaggt 1234 Score = 54.0 bits (27), Expect = 0.002 Identities = 66/79 (83%) Strand = Plus / Plus Query: 85 ctccgtcgcctcatcccgtgcatcctcgtcgtcgtgttcgccgtccacgccgtctccttc 144 ||||| |||||||||||| | ||||| || || | |||||||| |||||| ||||||| Sbjct: 72 ctccgccgcctcatcccgcggctcctcctcctcctcgtcgccgtctacgccgcctccttc 131 Query: 145 gctctctacctcctcctcc 163 || ||||||||||||||| Sbjct: 132 gcgatctacctcctcctcc 150
>gb|AY964642.1| Zea mays beta 1,2-xylosyltransferase mRNA, partial cds Length = 1023 Score = 392 bits (198), Expect = e-105 Identities = 342/390 (87%) Strand = Plus / Plus Query: 345 cgggatcgggacgcacaccatgagagcgctgctcgactccgcgcgtgtcgtgccgcccgg 404 ||||||||||| |||||| ||||| ||||||||||| || |||| || ||||| ||||| Sbjct: 1 cgggatcgggatgcacactatgagggcgctgctcgagtcgacgcgcgttgtgccacccgg 60 Query: 405 tgagctccactgctcccagtgggttgaagaaccaacacttctggtcacacgatttgagta 464 |||||| |||||||||||||||||||||||||| |||||||||||||| || || || || Sbjct: 61 tgagctgcactgctcccagtgggttgaagaaccgacacttctggtcactcgtttcgaata 120 Query: 465 tgcaaaccttttccacacaattacagactggtacagtgcatatgttagttccagagtcac 524 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 121 tgcgaaccttttccacacaattacggactggtacagtgcatatgttagttccagagtcac 180 Query: 525 gaatttacctgaccgtcctaatgttgttttcgtggatggtcattgcaaggcaccactgga 584 ||||||||| |||||||||||||||| ||| ||||||| ||||||||||||| | | || Sbjct: 181 gaatttaccaaaccgtcctaatgttgtattcttggatggccattgcaaggcacaattaga 240 Query: 585 gcaaacatgggaagcacttttttcgaatgtgacctatatcaagagcttctctggccctgt 644 | ||||||||||||||||||| || | |||||| ||| |||| |||| ||| ||||| Sbjct: 241 ggaaacatgggaagcacttttctcaagtgtgacatatgctaagaacttcactgttcctgt 300 Query: 645 ttgtttccggcgtgcagttctttcaccattgggctacgagactgctctatttaaggggct 704 ||||||||| | ||| ||||||||||||||||||| |||||||| | |||||||| || Sbjct: 301 ttgtttccgacatgccattctttcaccattgggctatgagactgccatgtttaagggtct 360 Query: 705 tagcgaaagcttcagctgtgaaggagcctc 734 |||||| ||||||||||||||||| ||||| Sbjct: 361 tagcgagagcttcagctgtgaaggtgcctc 390 Score = 268 bits (135), Expect = 6e-68 Identities = 261/303 (86%) Strand = Plus / Plus Query: 997 tgcaaaataaatgtggtgaatggtctttttgcgcacatgagcatgaaggagcagctccag 1056 |||||| | ||||| ||||| ||||||||||| ||||||| |||||||||||| |||| Sbjct: 647 tgcaaagtgaatgtcgtgaacggtctttttgcccacatgaccatgaaggagcaactccgt 706 Query: 1057 gctatcctggaagcttcagttataataggggctcatggggctggtctgacacacctggtt 1116 |||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| Sbjct: 707 gctatcctggaagcttcagtggtaataggggctcatggggctggtctaacacacttggtt 766 Query: 1117 tcggccacaccagacacaaaagttcttgagataatcagcagcttctatcggcgcccacat 1176 || || || || || ||||| ||||||||||| ||||||||| | || |||||||||||| Sbjct: 767 tcagcaactcctgatacaaaggttcttgagattatcagcagcatgtaccggcgcccacat 826 Query: 1177 tttgccttgatctcacactggaaggcattggaatatcatgccataaatctccctggatca 1236 ||||| | ||||||||||||||| | || || || |||||||||||||||||||||||| Sbjct: 827 tttgcacttatctcacactggaagtctttagagtaccatgccataaatctccctggatca 886 Query: 1237 tatgcaagtatcccagatgttaccagtgagttgagcaatatactgaaaggtctcggatgc 1296 | |||||| || ||||||| | || |||||||| || |||||| |||||||||||||| Sbjct: 887 tttgcaagggtcacagatgtcatcaacgagttgagaaaaatactggaaggtctcggatgc 946 Query: 1297 tga 1299 ||| Sbjct: 947 tga 949 Score = 147 bits (74), Expect = 2e-31 Identities = 160/188 (85%), Gaps = 3/188 (1%) Strand = Plus / Plus Query: 769 aaaactgcacggttgtctgaatttggggagatgattatagcttcttttgatcttctggag 828 |||||||||||||| |||||||| ||||| |||||| |||||||||||||||||||| || Sbjct: 425 aaaactgcacggttatctgaattcggggaaatgattgtagcttcttttgatcttctgcag 484 Query: 829 gatgggatcgtgccgtctaaaaagacatcaactgggctcaaggttctctttgttcggagg 888 |||| ||| || | || ||||| ||| | ||| ||||| |||||||||||||| | Sbjct: 485 gatgacatcatgtcatccaaaaa---atcgaatggactcaatgttctctttgttcgacga 541 Query: 889 gaagattacttggcccacccacgtcacagtgggaaggttgaatctaggctaagcaatgag 948 ||||| ||| |||||||||| || |||||||| ||||||||||| || |||||||||||| Sbjct: 542 gaagactacctggcccacccgcgccacagtggtaaggttgaatcgagactaagcaatgag 601 Query: 949 caggaggt 956 |||||||| Sbjct: 602 caggaggt 609
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 303 bits (153), Expect = 1e-78 Identities = 329/387 (85%), Gaps = 3/387 (0%) Strand = Plus / Plus Query: 572 aggcaccactggagcaaacatgggaagcacttttttcgaatgtgacctatatcaagagct 631 |||||| ||||||||||||||||||||||||||| || |||||||| ||| | |||| | Sbjct: 24883503 aggcacaactggagcaaacatgggaagcacttttctcaaatgtgacatatgttaagaatt 24883562 Query: 632 tctctggccctgtttgtttccggcgtgcagttctttcaccattgggctacgagactgctc 691 ||||||||||||||||||| || | |||| ||||||||||||||||||| |||||||| | Sbjct: 24883563 tctctggccctgtttgttttcgacatgcaattctttcaccattgggctatgagactgcgc 24883622 Query: 692 tatttaaggggcttagcgaaagcttcagctgtgaaggagcctcagctcagtcccttagaa 751 |||||||||| ||||| || ||||| ||||| ||||| || || || ||||||| ||| Sbjct: 24883623 tatttaagggccttagtgagagctttagctgcgaaggtgcttctgcggagtccctcagag 24883682 Query: 752 atagaccggaccaccagaaaactgcacggttgtctgaatttggggagatgattatagctt 811 | | || || ||||||||||| ||| |||||||||||||||| ||||||||| |||||| Sbjct: 24883683 aaaagcctgatcaccagaaaacggcaaggttgtctgaatttggtgagatgattttagctt 24883742 Query: 812 cttttgatcttctggaggatgggatcgtgccgtctaaaaagacatcaactgggctcaagg 871 |||||||||||||| ||||| || || | || ||| ||||||| ||||||||| | Sbjct: 24883743 cttttgatcttctgagggatgacatactgtcatccaaa---acatcaaatgggctcaatg 24883799 Query: 872 ttctctttgttcggagggaagattacttggcccacccacgtcacagtgggaaggttgaat 931 |||||||||||||| | || || ||||||||||| ||||| |||||||| |||||||||| Sbjct: 24883800 ttctctttgttcggcgagaggactacttggcccatccacgccacagtggaaaggttgaat 24883859 Query: 932 ctaggctaagcaatgagcaggaggtat 958 |||| |||||||||||| ||||||||| Sbjct: 24883860 ctagactaagcaatgagaaggaggtat 24883886 Score = 278 bits (140), Expect = 6e-71 Identities = 269/312 (86%) Strand = Plus / Plus Query: 988 ggtcagaagtgcaaaataaatgtggtgaatggtctttttgcgcacatgagcatgaaggag 1047 |||||||| |||||||||||||| | |||||||||||||| ||||||| |||||||||| Sbjct: 24883913 ggtcagaaatgcaaaataaatgtcatcaatggtctttttgcccacatgaacatgaaggag 24883972 Query: 1048 cagctccaggctatcctggaagcttcagttataataggggctcatggggctggtctgaca 1107 || || | ||||| | |||||||||||| |||||||||| |||||||||||||| || Sbjct: 24883973 caactgcgtgctatacaggaagcttcagtagtaataggggcacatggggctggtctaact 24884032 Query: 1108 cacctggtttcggccacaccagacacaaaagttcttgagataatcagcagcttctatcgg 1167 ||| ||||||| || || ||||| |||||||| ||||| || ||||||||| | ||||| Sbjct: 24884033 cacttggtttcagctaccccagatacaaaagtccttgaaatcatcagcagcatgtatcga 24884092 Query: 1168 cgcccacattttgccttgatctcacactggaaggcattggaatatcatgccataaatctc 1227 |||||||||||||| |||||||||||||||||| || || |||||||||||||||||| Sbjct: 24884093 cgcccacattttgcattgatctcacactggaagagcttagagtatcatgccataaatctc 24884152 Query: 1228 cctggatcatatgcaagtatcccagatgttaccagtgagttgagcaatatactgaaaggt 1287 ||||||||||||||||| | ||||||||| || ||||||||| ||||||||||||||| Sbjct: 24884153 cctggatcatatgcaagggtaacagatgttatcaatgagttgagtaatatactgaaaggt 24884212 Query: 1288 ctcggatgctga 1299 | ||||||||| Sbjct: 24884213 tttggatgctga 24884224 Score = 194 bits (98), Expect = 7e-46 Identities = 140/154 (90%) Strand = Plus / Plus Query: 421 cagtgggttgaagaaccaacacttctggtcacacgatttgagtatgcaaaccttttccac 480 |||||||||||||||||||||||||| || || || ||||| |||||||||||||||||| Sbjct: 24882550 cagtgggttgaagaaccaacacttctagtaactcgttttgaatatgcaaaccttttccac 24882609 Query: 481 acaattacagactggtacagtgcatatgttagttccagagtcacgaatttacctgaccgt 540 |||||||| |||||||||||||||||||| ||||||||||||||| |||||||| |||| Sbjct: 24882610 acaattacggactggtacagtgcatatgtcagttccagagtcacggatttacctaaccgc 24882669 Query: 541 cctaatgttgttttcgtggatggtcattgcaagg 574 |||||||| || || |||||||| |||||||||| Sbjct: 24882670 cctaatgtggtctttgtggatggacattgcaagg 24882703 Score = 188 bits (95), Expect = 5e-44 Identities = 217/257 (84%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 163 ctcgacccggcgctcatggcgatgtcgcgcggcggcgagccgatcgaccaggtgatgggc 222 |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 24881098 ctcgacccggggctcatcgcgatgtcgcgcggcggcgagccgctcgaccaggtgatgggc 24881157 Query: 223 cgcaaggaggaggaggagctgcccaggtacgaatccggtgcgctggtggtggaggggggc 282 ||| ||||||||||||||||||| |||||| |||| |||||| |||||||| | Sbjct: 24881158 cgcgccgaggaggaggagctgcccaagtacgagcccggcgcgctgcaggtggaggcg--- 24881214 Query: 283 gcggcggggaagagggggcccttggtcgagcccgggttcctcgatgcccacatgcccact 342 |||||| || || |||||| ||||| || | ||||||||||| ||| || ||||||| Sbjct: 24881215 gcggcgaagaggacggggccgttggtggaagcggggttcctcgacgcctacgtgcccacc 24881274 Query: 343 aacgggatcgggacgcacaccatgagagcgctgctcgactccgcgcgtgtcgtgccgccc 402 ||||||||||| |||||| ||||| ||||||||||||| | ||| |||||||||||| Sbjct: 24881275 ggcgggatcgggatgcacacgatgaggtcgctgctcgactcggggcgcgtcgtgccgccc 24881334 Query: 403 ggtgagctccactgctc 419 || ||||| |||||||| Sbjct: 24881335 ggcgagctacactgctc 24881351 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 ggtgatgggccgcaaggaggaggagg 238 ||||||| |||||||||||||||||| Sbjct: 26633753 ggtgatgagccgcaaggaggaggagg 26633778
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 303 bits (153), Expect = 1e-78 Identities = 329/387 (85%), Gaps = 3/387 (0%) Strand = Plus / Plus Query: 572 aggcaccactggagcaaacatgggaagcacttttttcgaatgtgacctatatcaagagct 631 |||||| ||||||||||||||||||||||||||| || |||||||| ||| | |||| | Sbjct: 87949 aggcacaactggagcaaacatgggaagcacttttctcaaatgtgacatatgttaagaatt 88008 Query: 632 tctctggccctgtttgtttccggcgtgcagttctttcaccattgggctacgagactgctc 691 ||||||||||||||||||| || | |||| ||||||||||||||||||| |||||||| | Sbjct: 88009 tctctggccctgtttgttttcgacatgcaattctttcaccattgggctatgagactgcgc 88068 Query: 692 tatttaaggggcttagcgaaagcttcagctgtgaaggagcctcagctcagtcccttagaa 751 |||||||||| ||||| || ||||| ||||| ||||| || || || ||||||| ||| Sbjct: 88069 tatttaagggccttagtgagagctttagctgcgaaggtgcttctgcggagtccctcagag 88128 Query: 752 atagaccggaccaccagaaaactgcacggttgtctgaatttggggagatgattatagctt 811 | | || || ||||||||||| ||| |||||||||||||||| ||||||||| |||||| Sbjct: 88129 aaaagcctgatcaccagaaaacggcaaggttgtctgaatttggtgagatgattttagctt 88188 Query: 812 cttttgatcttctggaggatgggatcgtgccgtctaaaaagacatcaactgggctcaagg 871 |||||||||||||| ||||| || || | || ||| ||||||| ||||||||| | Sbjct: 88189 cttttgatcttctgagggatgacatactgtcatccaaa---acatcaaatgggctcaatg 88245 Query: 872 ttctctttgttcggagggaagattacttggcccacccacgtcacagtgggaaggttgaat 931 |||||||||||||| | || || ||||||||||| ||||| |||||||| |||||||||| Sbjct: 88246 ttctctttgttcggcgagaggactacttggcccatccacgccacagtggaaaggttgaat 88305 Query: 932 ctaggctaagcaatgagcaggaggtat 958 |||| |||||||||||| ||||||||| Sbjct: 88306 ctagactaagcaatgagaaggaggtat 88332 Score = 278 bits (140), Expect = 6e-71 Identities = 269/312 (86%) Strand = Plus / Plus Query: 988 ggtcagaagtgcaaaataaatgtggtgaatggtctttttgcgcacatgagcatgaaggag 1047 |||||||| |||||||||||||| | |||||||||||||| ||||||| |||||||||| Sbjct: 88359 ggtcagaaatgcaaaataaatgtcatcaatggtctttttgcccacatgaacatgaaggag 88418 Query: 1048 cagctccaggctatcctggaagcttcagttataataggggctcatggggctggtctgaca 1107 || || | ||||| | |||||||||||| |||||||||| |||||||||||||| || Sbjct: 88419 caactgcgtgctatacaggaagcttcagtagtaataggggcacatggggctggtctaact 88478 Query: 1108 cacctggtttcggccacaccagacacaaaagttcttgagataatcagcagcttctatcgg 1167 ||| ||||||| || || ||||| |||||||| ||||| || ||||||||| | ||||| Sbjct: 88479 cacttggtttcagctaccccagatacaaaagtccttgaaatcatcagcagcatgtatcga 88538 Query: 1168 cgcccacattttgccttgatctcacactggaaggcattggaatatcatgccataaatctc 1227 |||||||||||||| |||||||||||||||||| || || |||||||||||||||||| Sbjct: 88539 cgcccacattttgcattgatctcacactggaagagcttagagtatcatgccataaatctc 88598 Query: 1228 cctggatcatatgcaagtatcccagatgttaccagtgagttgagcaatatactgaaaggt 1287 ||||||||||||||||| | ||||||||| || ||||||||| ||||||||||||||| Sbjct: 88599 cctggatcatatgcaagggtaacagatgttatcaatgagttgagtaatatactgaaaggt 88658 Query: 1288 ctcggatgctga 1299 | ||||||||| Sbjct: 88659 tttggatgctga 88670 Score = 194 bits (98), Expect = 7e-46 Identities = 140/154 (90%) Strand = Plus / Plus Query: 421 cagtgggttgaagaaccaacacttctggtcacacgatttgagtatgcaaaccttttccac 480 |||||||||||||||||||||||||| || || || ||||| |||||||||||||||||| Sbjct: 86996 cagtgggttgaagaaccaacacttctagtaactcgttttgaatatgcaaaccttttccac 87055 Query: 481 acaattacagactggtacagtgcatatgttagttccagagtcacgaatttacctgaccgt 540 |||||||| |||||||||||||||||||| ||||||||||||||| |||||||| |||| Sbjct: 87056 acaattacggactggtacagtgcatatgtcagttccagagtcacggatttacctaaccgc 87115 Query: 541 cctaatgttgttttcgtggatggtcattgcaagg 574 |||||||| || || |||||||| |||||||||| Sbjct: 87116 cctaatgtggtctttgtggatggacattgcaagg 87149 Score = 188 bits (95), Expect = 5e-44 Identities = 217/257 (84%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 163 ctcgacccggcgctcatggcgatgtcgcgcggcggcgagccgatcgaccaggtgatgggc 222 |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 85544 ctcgacccggggctcatcgcgatgtcgcgcggcggcgagccgctcgaccaggtgatgggc 85603 Query: 223 cgcaaggaggaggaggagctgcccaggtacgaatccggtgcgctggtggtggaggggggc 282 ||| ||||||||||||||||||| |||||| |||| |||||| |||||||| | Sbjct: 85604 cgcgccgaggaggaggagctgcccaagtacgagcccggcgcgctgcaggtggaggcg--- 85660 Query: 283 gcggcggggaagagggggcccttggtcgagcccgggttcctcgatgcccacatgcccact 342 |||||| || || |||||| ||||| || | ||||||||||| ||| || ||||||| Sbjct: 85661 gcggcgaagaggacggggccgttggtggaagcggggttcctcgacgcctacgtgcccacc 85720 Query: 343 aacgggatcgggacgcacaccatgagagcgctgctcgactccgcgcgtgtcgtgccgccc 402 ||||||||||| |||||| ||||| ||||||||||||| | ||| |||||||||||| Sbjct: 85721 ggcgggatcgggatgcacacgatgaggtcgctgctcgactcggggcgcgtcgtgccgccc 85780 Query: 403 ggtgagctccactgctc 419 || ||||| |||||||| Sbjct: 85781 ggcgagctacactgctc 85797
>gb|DQ026518.1| Zea mays beta 1,2-xylosyltransferase (xylt) gene, complete cds Length = 2752 Score = 268 bits (135), Expect = 6e-68 Identities = 261/303 (86%) Strand = Plus / Plus Query: 997 tgcaaaataaatgtggtgaatggtctttttgcgcacatgagcatgaaggagcagctccag 1056 |||||| | ||||| ||||| ||||||||||| ||||||| |||||||||||| |||| Sbjct: 2450 tgcaaagtgaatgtcgtgaacggtctttttgcccacatgaccatgaaggagcaactccgt 2509 Query: 1057 gctatcctggaagcttcagttataataggggctcatggggctggtctgacacacctggtt 1116 |||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||||| Sbjct: 2510 gctatcctggaagcttcagtggtaataggggctcatggggctggtctaacacacttggtt 2569 Query: 1117 tcggccacaccagacacaaaagttcttgagataatcagcagcttctatcggcgcccacat 1176 || || || || || ||||| ||||||||||| ||||||||| | || |||||||||||| Sbjct: 2570 tcagcaactcctgatacaaaggttcttgagattatcagcagcatgtaccggcgcccacat 2629 Query: 1177 tttgccttgatctcacactggaaggcattggaatatcatgccataaatctccctggatca 1236 ||||| | ||||||||||||||| | || || || |||||||||||||||||||||||| Sbjct: 2630 tttgcacttatctcacactggaagtctttagagtaccatgccataaatctccctggatca 2689 Query: 1237 tatgcaagtatcccagatgttaccagtgagttgagcaatatactgaaaggtctcggatgc 1296 | |||||| || ||||||| | || |||||||| || |||||| |||||||||||||| Sbjct: 2690 tttgcaagggtcacagatgtcatcaacgagttgagaaaaatactggaaggtctcggatgc 2749 Query: 1297 tga 1299 ||| Sbjct: 2750 tga 2752 Score = 210 bits (106), Expect = 1e-50 Identities = 142/154 (92%) Strand = Plus / Plus Query: 421 cagtgggttgaagaaccaacacttctggtcacacgatttgagtatgcaaaccttttccac 480 ||||||||||||||||| |||||||||||||| || || || ||||| |||||||||||| Sbjct: 1316 cagtgggttgaagaaccgacacttctggtcactcgtttcgaatatgcgaaccttttccac 1375 Query: 481 acaattacagactggtacagtgcatatgttagttccagagtcacgaatttacctgaccgt 540 |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1376 acaattacggactggtacagtgcatatgttagttccagagtcacgaatttaccaaaccgt 1435 Query: 541 cctaatgttgttttcgtggatggtcattgcaagg 574 ||||||||||| ||| ||||||| |||||||||| Sbjct: 1436 cctaatgttgtattcttggatggccattgcaagg 1469 Score = 147 bits (74), Expect = 2e-31 Identities = 160/188 (85%), Gaps = 3/188 (1%) Strand = Plus / Plus Query: 769 aaaactgcacggttgtctgaatttggggagatgattatagcttcttttgatcttctggag 828 |||||||||||||| |||||||| ||||| |||||| |||||||||||||||||||| || Sbjct: 2228 aaaactgcacggttatctgaattcggggaaatgattgtagcttcttttgatcttctgcag 2287 Query: 829 gatgggatcgtgccgtctaaaaagacatcaactgggctcaaggttctctttgttcggagg 888 |||| ||| || | || ||||| ||| | ||| ||||| |||||||||||||| | Sbjct: 2288 gatgacatcatgtcatccaaaaa---atcgaatggactcaatgttctctttgttcgacga 2344 Query: 889 gaagattacttggcccacccacgtcacagtgggaaggttgaatctaggctaagcaatgag 948 ||||| ||| |||||||||| || |||||||| ||||||||||| || |||||||||||| Sbjct: 2345 gaagactacctggcccacccgcgccacagtggtaaggttgaatcgagactaagcaatgag 2404 Query: 949 caggaggt 956 |||||||| Sbjct: 2405 caggaggt 2412 Score = 139 bits (70), Expect = 4e-29 Identities = 211/258 (81%) Strand = Plus / Plus Query: 166 gacccggcgctcatggcgatgtcgcgcggcggcgagccgatcgaccaggtgatgggccgc 225 |||||||||||||| ||||||||||||||||| |||||| | || ||||||||||||||| Sbjct: 418 gacccggcgctcatcgcgatgtcgcgcggcggggagccgctggagcaggtgatgggccgc 477 Query: 226 aaggaggaggaggagctgcccaggtacgaatccggtgcgctggtggtggaggggggcgcg 285 |||||||||||||| |||| |||||| |||| |||||| |||||||||| ||| Sbjct: 478 gccgaggaggaggagctacccaagtacgagcccggcgcgctgcaggtggaggggccggcg 537 Query: 286 gcggggaagagggggcccttggtcgagcccgggttcctcgatgcccacatgcccactaac 345 ||||| | | || |||| |||| || | ||||||||| | | | || | ||||| | Sbjct: 538 gcgggtatgccggtgcccctggtggacgcagggttcctcaacgactacgtacccaccggc 597 Query: 346 gggatcgggacgcacaccatgagagcgctgctcgactccgcgcgtgtcgtgccgcccggt 405 |||||||||| |||||| ||||| ||||||||||| || |||| || ||||| |||||| Sbjct: 598 gggatcgggatgcacactatgagggcgctgctcgagtcgacgcgcgttgtgccacccggt 657 Query: 406 gagctccactgctcccag 423 ||||| |||||||||||| Sbjct: 658 gagctgcactgctcccag 675 Score = 119 bits (60), Expect = 3e-23 Identities = 126/148 (85%) Strand = Plus / Plus Query: 587 aaacatgggaagcacttttttcgaatgtgacctatatcaagagcttctctggccctgttt 646 ||||||||||||||||||| || | |||||| ||| |||| |||| ||| ||||||| Sbjct: 2046 aaacatgggaagcacttttctcaagtgtgacatatgctaagaacttcactgttcctgttt 2105 Query: 647 gtttccggcgtgcagttctttcaccattgggctacgagactgctctatttaaggggctta 706 ||||||| | ||| ||||||||||||||||||| |||||||| | |||||||| |||| Sbjct: 2106 gtttccgacatgccattctttcaccattgggctatgagactgccatgtttaagggtctta 2165 Query: 707 gcgaaagcttcagctgtgaaggagcctc 734 |||| ||||||||||||||||| ||||| Sbjct: 2166 gcgagagcttcagctgtgaaggtgcctc 2193 Score = 54.0 bits (27), Expect = 0.002 Identities = 66/79 (83%) Strand = Plus / Plus Query: 85 ctccgtcgcctcatcccgtgcatcctcgtcgtcgtgttcgccgtccacgccgtctccttc 144 ||||| |||||||||||| | ||||| || || | |||||||| |||||| ||||||| Sbjct: 37 ctccgccgcctcatcccgcggctcctcctcctcctcgtcgccgtctacgccgcctccttc 96 Query: 145 gctctctacctcctcctcc 163 || ||||||||||||||| Sbjct: 97 gcgatctacctcctcctcc 115
>emb|AJ621917.1| Oryza sativa (japonica cultivar-group) partial xt gene for beta-1,2-xylosyltransferase, exon 1 Length = 588 Score = 188 bits (95), Expect = 5e-44 Identities = 217/257 (84%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 163 ctcgacccggcgctcatggcgatgtcgcgcggcggcgagccgatcgaccaggtgatgggc 222 |||||||||| |||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 331 ctcgacccggggctcatcgcgatgtcgcgcggcggcgagccgctcgaccaggtgatgggc 390 Query: 223 cgcaaggaggaggaggagctgcccaggtacgaatccggtgcgctggtggtggaggggggc 282 ||| ||||||||||||||||||| |||||| |||| |||||| |||||||| | Sbjct: 391 cgcgccgaggaggaggagctgcccaagtacgagcccggcgcgctgcaggtggaggcg--- 447 Query: 283 gcggcggggaagagggggcccttggtcgagcccgggttcctcgatgcccacatgcccact 342 |||||| || || |||||| ||||| || | ||||||||||| ||| || ||||||| Sbjct: 448 gcggcgaagaggacggggccgttggtggaagcggggttcctcgacgcctacgtgcccacc 507 Query: 343 aacgggatcgggacgcacaccatgagagcgctgctcgactccgcgcgtgtcgtgccgccc 402 ||||||||||| |||||| ||||| ||||||||||||| | ||| |||||||||||| Sbjct: 508 ggcgggatcgggatgcacacgatgaggtcgctgctcgactcggggcgcgtcgtgccgccc 567 Query: 403 ggtgagctccactgctc 419 || ||||| |||||||| Sbjct: 568 ggcgagctacactgctc 584
>emb|AM179856.1| Vitis vinifera partial mRNA for Beta-1,2-xylosyltransferase (xt1 gene) Length = 1749 Score = 115 bits (58), Expect = 5e-22 Identities = 73/78 (93%) Strand = Plus / Plus Query: 433 gaaccaacacttctggtcacacgatttgagtatgcaaaccttttccacacaattacagac 492 |||||||||||||| |||||||| |||||||||||||||||||| |||||| ||||||| Sbjct: 551 gaaccaacacttctagtcacacgctttgagtatgcaaacctttttcacacatttacagat 610 Query: 493 tggtacagtgcatatgtt 510 |||||||||||||||||| Sbjct: 611 tggtacagtgcatatgtt 628 Score = 61.9 bits (31), Expect = 7e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 874 ctctttgttcggagggaagattacttggcccacccacgtcacagtgggaaggttgaatct 933 ||||||||| || | |||||||| |||| ||||||||||| |||| ||||||||||| Sbjct: 989 ctctttgttaggcgagaagattatgtggctcacccacgtcatggtggtaaggttgaatca 1048 Query: 934 aggctaagcaatgagcaggaggt 956 || || |||||||| |||||||| Sbjct: 1049 agacttagcaatgaacaggaggt 1071 Score = 48.1 bits (24), Expect = 0.11 Identities = 63/76 (82%) Strand = Plus / Plus Query: 1166 ggcgcccacattttgccttgatctcacactggaaggcattggaatatcatgccataaatc 1225 ||||||| |||||||| ||||| || || ||||| | ||||| ||||||||||| |||| Sbjct: 1281 ggcgcccgcattttgcattgatttctcagtggaaaggcttggagtatcatgccattaatc 1340 Query: 1226 tccctggatcatatgc 1241 | |||||||||||| Sbjct: 1341 ttgatggatcatatgc 1356
>emb|CT573353.14| M.truncatula DNA sequence from clone MTH2-124L21 on chromosome 3, complete sequence Length = 147535 Score = 91.7 bits (46), Expect = 8e-15 Identities = 79/90 (87%) Strand = Plus / Plus Query: 421 cagtgggttgaagaaccaacacttctggtcacacgatttgagtatgcaaaccttttccac 480 |||||| |||| ||||||||||||||||| ||||| ||||| ||||| || || || ||| Sbjct: 121648 cagtggattgaggaaccaacacttctggtgacacgctttgaatatgctaatctatttcac 121707 Query: 481 acaattacagactggtacagtgcatatgtt 510 || |||||||||||||||||||||||||| Sbjct: 121708 actgttacagactggtacagtgcatatgtt 121737
>gb|AY302251.2| Medicago sativa beta 1,2 xylosyltransferase mRNA, complete cds Length = 1582 Score = 89.7 bits (45), Expect = 3e-14 Identities = 78/89 (87%) Strand = Plus / Plus Query: 422 agtgggttgaagaaccaacacttctggtcacacgatttgagtatgcaaaccttttccaca 481 ||||| |||| ||||||||||||||||| ||||| ||||| ||||| || || || |||| Sbjct: 676 agtggattgaggaaccaacacttctggtgacacgctttgaatatgctaatctatttcaca 735 Query: 482 caattacagactggtacagtgcatatgtt 510 | |||||||||||||||||||||||||| Sbjct: 736 ctgttacagactggtacagtgcatatgtt 764
>emb|AJ627183.1| Nicotiana tabacum xylt gene for putative beta-(1,2)-xylosyltransferase, exons 1-3 Length = 4973 Score = 79.8 bits (40), Expect = 3e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 451 acacgatttgagtatgcaaaccttttccacacaattacagactggtacagtgcata 506 ||||||||||||||||||||||||||||||||| |||| || ||||| |||||||| Sbjct: 2056 acacgatttgagtatgcaaaccttttccacacagttaccgattggtatagtgcata 2111 Score = 61.9 bits (31), Expect = 7e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 767 agaaaactgcacggttgtctgaatttggggagatgatta 805 ||||||||||||||||||| || |||||||||||||||| Sbjct: 3800 agaaaactgcacggttgtccgagtttggggagatgatta 3838
>emb|AJ627182.1| Nicotiana tabacum mRNA for putative putative beta-(1,2)-xylosyltransferase (xylt gene) Length = 2318 Score = 79.8 bits (40), Expect = 3e-11 Identities = 52/56 (92%) Strand = Plus / Plus Query: 451 acacgatttgagtatgcaaaccttttccacacaattacagactggtacagtgcata 506 ||||||||||||||||||||||||||||||||| |||| || ||||| |||||||| Sbjct: 745 acacgatttgagtatgcaaaccttttccacacagttaccgattggtatagtgcata 800 Score = 58.0 bits (29), Expect = 1e-04 Identities = 32/33 (96%) Strand = Plus / Plus Query: 771 aactgcacggttgtctgaatttggggagatgat 803 |||||||||||||||||| |||||||||||||| Sbjct: 1065 aactgcacggttgtctgagtttggggagatgat 1097
>emb|AJ891042.1| Populus tremula x Populus alba mRNA for beta 1,2 xylosyltransferase (poXYL1 gene), clone INRA 717 1B4 Length = 1407 Score = 79.8 bits (40), Expect = 3e-11 Identities = 88/104 (84%) Strand = Plus / Plus Query: 421 cagtgggttgaagaaccaacacttctggtcacacgatttgagtatgcaaaccttttccac 480 |||||| |||| || ||||| ||| ||||||| |||||||||||||||| ||||| || Sbjct: 526 cagtggattgaggagccaacccttttggtcaccagatttgagtatgcaaatctttttcat 585 Query: 481 acaattacagactggtacagtgcatatgttagttccagagtcac 524 || || ||||| |||||||||||||||||| ||| |||||||| Sbjct: 586 actatcacagattggtacagtgcatatgttgcttcgagagtcac 629
>emb|AM179855.1| Solanum tuberosum mRNA for Beta-1,2-xylosyltransferase (xt1 gene) Length = 2046 Score = 65.9 bits (33), Expect = 5e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 422 agtgggttgaagaaccaacacttctggtcacacgatttgagtatgcaaaccttttccaca 481 ||||| ||||||| ||| ||||| || | || ||||||||||||||||| ||||| || | Sbjct: 695 agtggattgaagagccatcacttttgattacgcgatttgagtatgcaaatctttttcata 754 Query: 482 caattacagactggtacagtgcata 506 ||||||| || ||||| |||||||| Sbjct: 755 caattactgattggtatagtgcata 779 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 769 aaaactgcacggttgtctgaatttggggagatgat 803 ||||||||||||||||| || ||||| |||||||| Sbjct: 1042 aaaactgcacggttgtccgagtttggagagatgat 1076
>gb|DQ789146.1| Lemna minor beta-1,2-xylosyltransferase isoform 1 (Xylt1) mRNA, partial cds Length = 1272 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 874 ctctttgttcggagggaagattacttggcccacccacgtcacagtggga 922 |||||||| ||| ||||||||||| |||| |||||||| |||||||||| Sbjct: 847 ctctttgtgcggcgggaagattacgtggcgcacccacgccacagtggga 895
>gb|BT013736.1| Lycopersicon esculentum clone 132596R, mRNA sequence Length = 2078 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 454 cgatttgagtatgcaaaccttttccacacaattacagactggtacagtgcata 506 ||||||||||||||||| ||||| || |||||||| || ||||| |||||||| Sbjct: 755 cgatttgagtatgcaaatctttttcatacaattactgattggtatagtgcata 807 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 769 aaaactgcacggttgtctgaatttggggagatgat 803 ||||||||||||||||| || ||||| |||||||| Sbjct: 1070 aaaactgcacggttgtccgagtttggagagatgat 1104
>gb|DQ789144.1| Lemna minor beta-1,2-xylosyltransferase isoform 2 (Xylt2) mRNA, complete cds Length = 1530 Score = 50.1 bits (25), Expect = 0.027 Identities = 43/49 (87%) Strand = Plus / Plus Query: 874 ctctttgttcggagggaagattacttggcccacccacgtcacagtggga 922 ||||| || ||| ||||||||||| |||| |||||||| |||||||||| Sbjct: 1102 ctcttcgtgcggcgggaagattacgtggcgcacccacgccacagtggga 1150
>emb|AJ618933.2| Physcomitrella patens partial xylt gene for beta 1,2-xylosyltransferase, exons 1-3 Length = 3874 Score = 50.1 bits (25), Expect = 0.027 Identities = 46/53 (86%) Strand = Plus / Plus Query: 451 acacgatttgagtatgcaaaccttttccacacaattacagactggtacagtgc 503 ||||| ||||||||||| || ||||||||||| | || |||||||||||||| Sbjct: 2516 acacgttttgagtatgcgaatcttttccacactgtcaccgactggtacagtgc 2568
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Minus Query: 217 atgggccgcaaggaggaggaggag 240 |||||||||||||||||||||||| Sbjct: 23627297 atgggccgcaaggaggaggaggag 23627274
>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157690 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 217 atgggccgcaaggaggaggaggag 240 |||||||||||||||||||||||| Sbjct: 79113 atgggccgcaaggaggaggaggag 79136
>emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb0036A19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128795 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 217 atgggccgcaaggaggaggaggag 240 |||||||||||||||||||||||| Sbjct: 128329 atgggccgcaaggaggaggaggag 128352
>gb|AE014296.4| Drosophila melanogaster chromosome 3L, complete sequence Length = 24543557 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1190 cacactggaaggcattggaatat 1212 ||||||||||||||||||||||| Sbjct: 16401292 cacactggaaggcattggaatat 16401270
>ref|XM_001094468.1| PREDICTED: Macaca mulatta similar to kinesin family member 7 (LOC706132), mRNA Length = 4496 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 227 aggaggaggaggagctgcccagg 249 ||||||||||||||||||||||| Sbjct: 1897 aggaggaggaggagctgcccagg 1919
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Minus Query: 163 ctcgacccggcgctcatggcgat 185 ||||||||||||||||||||||| Sbjct: 2363861 ctcgacccggcgctcatggcgat 2363839
>gb|AC010660.6| Drosophila melanogaster 3L BAC RP98-9I16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 186795 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1190 cacactggaaggcattggaatat 1212 ||||||||||||||||||||||| Sbjct: 159369 cacactggaaggcattggaatat 159347
>gb|AY260760.3| Streptomyces hygroscopicus subsp. yingchengensis Shy1 (shy1), CvhE (cvhE), CvhD (cvhD), CvhC (cvhC), CvhB (cvhB), CvhA (cvhA), Shy26 (shy26), Shy4 (shy4), Shy5 (shy5), Shy6 (shy6), Shy7 (shy7), Shy8 (shy8), Shy9 (shy9), Shy10 (shy10), Shy11 (shy11), Shy12 (shy12), Shy13 (shy13), Shy14 (shy14), Shy15 (shy15), Shy16 (shy16), Shy17 (shy17), Shy18 (shy18), Hmr19 (hmr19), Shy20 (shy20), Shy21 (shy21), Shy22 (shy22), Shy23 (shy23), Shy24 (shy24), and Shy25 (shy25) genes, complete cds Length = 36687 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 109 ctcgtcgtcgtgttcgccgtcca 131 ||||||||||||||||||||||| Sbjct: 21376 ctcgtcgtcgtgttcgccgtcca 21398
>gb|CP000459.1| Burkholderia cenocepacia HI2424 chromosome 2, complete genome Length = 2998664 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 188 cgcgcggcggcgagccgatcga 209 |||||||||||||||||||||| Sbjct: 233326 cgcgcggcggcgagccgatcga 233305
>ref|NM_001052075.1| Oryza sativa (japonica cultivar-group) Os01g0972200 (Os01g0972200) mRNA, complete cds Length = 1327 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 ggtgatgggccgcaaggaggaggagg 238 ||||||| |||||||||||||||||| Sbjct: 575 ggtgatgagccgcaaggaggaggagg 600
>gb|CP000379.1| Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence Length = 2788459 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 cgcgcggcggcgagccgatcga 209 |||||||||||||||||||||| Sbjct: 2036488 cgcgcggcggcgagccgatcga 2036509
>gb|AY302058.1| Oryza sativa (japonica cultivar-group) zinc transporter (ZIP1) mRNA, complete cds Length = 1343 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 ggtgatgggccgcaaggaggaggagg 238 ||||||| |||||||||||||||||| Sbjct: 575 ggtgatgagccgcaaggaggaggagg 600
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 gaggaggaggagctgcccaggtacga 254 ||||||||||||||||||| |||||| Sbjct: 4251320 gaggaggaggagctgcccaagtacga 4251345
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 213 ggtgatgggccgcaaggaggaggagg 238 ||||||| |||||||||||||||||| Sbjct: 42899246 ggtgatgagccgcaaggaggaggagg 42899221
>emb|AL359175.10| Human DNA sequence from clone RP11-213K14 on chromosome 10 Contains part of a variant of the NEBL gene for the nebulette protein (actin-binding Z-disc protein) and an eukaryotic translation initiation factor 4B (EIF4B)(EIF-4B) pseudogene, complete sequence Length = 155290 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 227 aggaggaggaggagctgcccag 248 |||||||||||||||||||||| Sbjct: 77572 aggaggaggaggagctgcccag 77593
>dbj|AP003298.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698H10 Length = 153449 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 213 ggtgatgggccgcaaggaggaggagg 238 ||||||| |||||||||||||||||| Sbjct: 125 ggtgatgagccgcaaggaggaggagg 100
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 213 ggtgatgggccgcaaggaggaggagg 238 ||||||| |||||||||||||||||| Sbjct: 92980 ggtgatgagccgcaaggaggaggagg 92955
>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702C09 Length = 138203 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 ggtgatgggccgcaaggaggaggagg 238 ||||||| |||||||||||||||||| Sbjct: 45280 ggtgatgagccgcaaggaggaggagg 45305
>dbj|AP005589.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0523B07 Length = 170510 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 229 gaggaggaggagctgcccaggtacga 254 ||||||||||||||||||| |||||| Sbjct: 75079 gaggaggaggagctgcccaagtacga 75104
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 ggtgatgggccgcaaggaggaggagg 238 ||||||| |||||||||||||||||| Sbjct: 182620 ggtgatgagccgcaaggaggaggagg 182645
>emb|AL512543.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0505A02, complete sequence Length = 83989 Score = 44.1 bits (22), Expect = 1.7 Identities = 25/26 (96%) Strand = Plus / Minus Query: 229 gaggaggaggagctgcccaggtacga 254 ||||||||||||||||||| |||||| Sbjct: 75031 gaggaggaggagctgcccaagtacga 75006
>emb|AL935061.15| Mouse DNA sequence from clone RP23-186P20 on chromosome 2, complete sequence Length = 120330 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 726 aggagcctcagctcagtccctt 747 |||||||||||||||||||||| Sbjct: 60144 aggagcctcagctcagtccctt 60123
>emb|AM393557.1| Synthetic construct Homo sapiens mRNA for hypothetical protein (RTN4 gene), clone IMAGE:3505850.1E1 Length = 1224 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 539 ggtggaggggggcgcggcggg 519
>emb|AM393104.1| Synthetic construct Homo sapiens mRNA for hypothetical protein (RTN4 gene), clone IMAGE:3901353.1E8 Length = 1167 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 539 ggtggaggggggcgcggcggg 519
>ref|XM_001183234.1| PREDICTED: Strongylocentrotus purpuratus similar to cytoplasmic dynein intermediate chain 2C (LOC590595), mRNA Length = 1737 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 cgggatcgggacgcacaccat 365 ||||||||||||||||||||| Sbjct: 1687 cgggatcgggacgcacaccat 1667
>gb|DQ515909.1| Bordetella parapertussis strain Bpp5 fosmid pBpp5fos495, genomic sequence Length = 34118 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1517 ctgctgccagatgtagaacga 1537 ||||||||||||||||||||| Sbjct: 13744 ctgctgccagatgtagaacga 13724
>ref|XM_522805.2| PREDICTED: Pan troglodytes similar to KIAA1831 protein (LOC467408), mRNA Length = 4117 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 agcgcactccggcggccggcg 42 ||||||||||||||||||||| Sbjct: 1308 agcgcactccggcggccggcg 1328
>gb|CP000450.1| Nitrosomonas eutropha C71, complete genome Length = 2661057 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1211 atcatgccataaatctccctg 1231 ||||||||||||||||||||| Sbjct: 640524 atcatgccataaatctccctg 640504
>ref|XM_001081254.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L35 (predicted) (RGD1564550_predicted), mRNA Length = 372 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 gcaaggaggaggaggagctgc 244 ||||||||||||||||||||| Sbjct: 32 gcaaggaggaggaggagctgc 52
>ref|XM_001112090.1| PREDICTED: Macaca mulatta reticulon 4 (RTN4), mRNA Length = 4958 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 945 ggtggaggggggcgcggcggg 925
>gb|BC012335.1| Homo sapiens cDNA clone IMAGE:3510627, **** WARNING: chimeric clone **** Length = 2172 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 1151 ggtggaggggggcgcggcggg 1131
>gb|BC114748.1| Bos taurus hypothetical protein LOC616857, mRNA (cDNA clone MGC:137926 IMAGE:8084610), complete cds Length = 2268 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 gtggaggggggcgcggcgggg 291 ||||||||||||||||||||| Sbjct: 687 gtggaggggggcgcggcgggg 667
>ref|NM_124932.3| Arabidopsis thaliana AtXylT; xylosyltransferase (AtXylT) mRNA, complete cds Length = 2045 Score = 42.1 bits (21), Expect = 6.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 662 ttctttcaccattgggctacgagactgctctatttaa 698 |||||||||||||||| ||||| || ||||| ||||| Sbjct: 1161 ttctttcaccattgggatacgaaaccgctctttttaa 1197
>gb|AY102285.1| Homo sapiens RTN4 (RTN4) gene, complete sequence, alternatively spliced Length = 90756 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 4759 ggtggaggggggcgcggcggg 4739
>ref|XM_882171.1| PREDICTED: Bos taurus hypothetical protein LOC616857 (LOC616857), mRNA Length = 848 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 gtggaggggggcgcggcgggg 291 ||||||||||||||||||||| Sbjct: 547 gtggaggggggcgcggcgggg 527
>ref|XM_597526.2| PREDICTED: Bos taurus similar to erythrocyte membrane protein band 4.1 like 4B isoform 2 (LOC519310), mRNA Length = 3024 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1096 gctggtctgacacacctggtt 1116 ||||||||||||||||||||| Sbjct: 2942 gctggtctgacacacctggtt 2922
>gb|BC071848.1| Homo sapiens reticulon 4, mRNA (cDNA clone IMAGE:4635625), complete cds Length = 1466 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 502 ggtggaggggggcgcggcggg 482
>gb|BC068991.1| Homo sapiens reticulon 4, mRNA (cDNA clone IMAGE:4634289), complete cds Length = 1728 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 764 ggtggaggggggcgcggcggg 744
>gb|BC012619.1| Homo sapiens reticulon 4, mRNA (cDNA clone IMAGE:4082756), complete cds Length = 1654 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 671 ggtggaggggggcgcggcggg 651
>gb|BC010737.1| Homo sapiens reticulon 4, mRNA (cDNA clone IMAGE:3901353), complete cds Length = 1485 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 521 ggtggaggggggcgcggcggg 501
>gb|BC016165.1| Homo sapiens reticulon 4, mRNA (cDNA clone IMAGE:3505850), complete cds Length = 1784 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 763 ggtggaggggggcgcggcggg 743
>gb|BC026788.1| Homo sapiens reticulon 4, mRNA (cDNA clone IMAGE:3862911), complete cds Length = 1668 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 702 ggtggaggggggcgcggcggg 682
>gb|BC068625.1| Xenopus laevis hypothetical protein MGC78997, mRNA (cDNA clone MGC:78997 IMAGE:4406807), complete cds Length = 1055 Score = 42.1 bits (21), Expect = 6.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1631 atcaaactgtaattgtaattttata 1655 ||||||||||| ||||||||||||| Sbjct: 992 atcaaactgtatttgtaattttata 1016
>gb|AY102279.1| Homo sapiens RTN4 isoform A (RTN4) mRNA, complete cds; alternatively spliced Length = 4789 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 760 ggtggaggggggcgcggcggg 740
>gb|AY102278.1| Homo sapiens RTN4 isoform B2 (RTN4) mRNA, complete cds; alternatively spliced Length = 2389 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 760 ggtggaggggggcgcggcggg 740
>gb|AY102277.1| Homo sapiens RTN4 isoform B1 (RTN4) mRNA, complete cds; alternatively spliced Length = 2332 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 760 ggtggaggggggcgcggcggg 740
>dbj|AK091572.1| Homo sapiens cDNA FLJ34253 fis, clone FCBBF5000165, moderately similar to Homo sapiens JP3 mRNA for junctophilin type3 Length = 2446 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 agcgcactccggcggccggcg 42 ||||||||||||||||||||| Sbjct: 1190 agcgcactccggcggccggcg 1210
>dbj|AK075039.1| Homo sapiens cDNA FLJ90558 fis, clone OVARC1001030 Length = 1694 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 748 ggtggaggggggcgcggcggg 728
>ref|XM_818199.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.406.0170) partial mRNA Length = 906 Score = 42.1 bits (21), Expect = 6.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 144 cgctctctacctcctcctcctcgac 168 |||| |||||||||||||||||||| Sbjct: 139 cgctttctacctcctcctcctcgac 115
>gb|AY143907.1| Arabidopsis thaliana At5g55500/MTE17_21 mRNA, complete cds Length = 1605 Score = 42.1 bits (21), Expect = 6.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 662 ttctttcaccattgggctacgagactgctctatttaa 698 |||||||||||||||| ||||| || ||||| ||||| Sbjct: 935 ttctttcaccattgggatacgaaaccgctctttttaa 971
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1621 ctgcagatagatcaaactgta 1641 ||||||||||||||||||||| Sbjct: 367471 ctgcagatagatcaaactgta 367491
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 ctctacctcctcctcctcgac 168 ||||||||||||||||||||| Sbjct: 2492345 ctctacctcctcctcctcgac 2492365
>gb|AF411785.1|AF411785 Arabidopsis thaliana AT5g55500/MTE17_21 mRNA, complete cds Length = 1991 Score = 42.1 bits (21), Expect = 6.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 662 ttctttcaccattgggctacgagactgctctatttaa 698 |||||||||||||||| ||||| || ||||| ||||| Sbjct: 1127 ttctttcaccattgggatacgaaaccgctctttttaa 1163
>ref|NM_020532.4| Homo sapiens reticulon 4 (RTN4), transcript variant 1, mRNA Length = 4871 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 814 ggtggaggggggcgcggcggg 794
>ref|NM_207520.1| Homo sapiens reticulon 4 (RTN4), transcript variant 4, mRNA Length = 2471 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 814 ggtggaggggggcgcggcggg 794
>ref|NM_153828.2| Homo sapiens reticulon 4 (RTN4), transcript variant 2, mRNA Length = 2414 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 814 ggtggaggggggcgcggcggg 794
>emb|AJ344068.1|PPU344068 Pseudomonas putida plasmid pWW0 complete genome Length = 116580 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1517 ctgctgccagatgtagaacga 1537 ||||||||||||||||||||| Sbjct: 62539 ctgctgccagatgtagaacga 62559
>gb|AC093165.5| Homo sapiens BAC clone RP11-1255P17 from 2, complete sequence Length = 163772 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 15964 ggtggaggggggcgcggcggg 15984
>gb|AF148538.1|AF148538 Homo sapiens reticulon 4b mRNA, complete cds Length = 2235 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 657 ggtggaggggggcgcggcggg 637
>gb|AF148537.1|AF148537 Homo sapiens reticulon 4a mRNA, complete cds Length = 4632 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 657 ggtggaggggggcgcggcggg 637
>ref|XM_220862.3| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L35 (predicted) (RGD1564550_predicted), mRNA Length = 372 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 gcaaggaggaggaggagctgc 244 ||||||||||||||||||||| Sbjct: 32 gcaaggaggaggaggagctgc 52
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 ctctacctcctcctcctcgac 168 ||||||||||||||||||||| Sbjct: 64731 ctctacctcctcctcctcgac 64751
>dbj|AB015479.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTE17 Length = 80675 Score = 42.1 bits (21), Expect = 6.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 662 ttctttcaccattgggctacgagactgctctatttaa 698 |||||||||||||||| ||||| || ||||| ||||| Sbjct: 59546 ttctttcaccattgggatacgaaaccgctctttttaa 59582
>dbj|AB020693.1| Homo sapiens mRNA for KIAA0886 protein, partial cds Length = 4053 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 650 ggtggaggggggcgcggcggg 630
>dbj|AK098385.1| Homo sapiens cDNA FLJ25519 fis, clone CBR06737, highly similar to Homo sapiens mRNA for Nogo-A protein (Nogo gene) Length = 1631 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 667 ggtggaggggggcgcggcggg 647
>dbj|AK130812.1| Homo sapiens cDNA FLJ27302 fis, clone TMS04776 Length = 1525 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 575 ggtggaggggggcgcggcggg 555
>dbj|AK129806.1| Homo sapiens cDNA FLJ26295 fis, clone DMC07157 Length = 1619 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 673 ggtggaggggggcgcggcggg 653
>gb|AF272852.1|AF272852 Arabidopsis thaliana beta 1,2-xylosyltransferase mRNA, complete cds Length = 1602 Score = 42.1 bits (21), Expect = 6.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 662 ttctttcaccattgggctacgagactgctctatttaa 698 |||||||||||||||| ||||| || ||||| ||||| Sbjct: 935 ttctttcaccattgggatacgaaaccgctctttttaa 971
>emb|AJ429144.1|PPA429144 Physcomitrella patens mRNA for beta 1,2-xylosyltransferase (xylt gene) Length = 1788 Score = 42.1 bits (21), Expect = 6.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 451 acacgatttgagtatgcaaaccttttccacacaattacagactggtacagtgc 503 ||||| ||||||||||| || ||||||| ||| | || |||||||||||||| Sbjct: 895 acacgttttgagtatgcgaatcttttcctcactgtcaccgactggtacagtgc 947
>emb|AJ277603.1|ATH277603 Arabidopsis thaliana mRNA for beta1,2-Xylosyltransferase (xylt gene) Length = 1936 Score = 42.1 bits (21), Expect = 6.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 662 ttctttcaccattgggctacgagactgctctatttaa 698 |||||||||||||||| ||||| || ||||| ||||| Sbjct: 1069 ttctttcaccattgggatacgaaaccgctctttttaa 1105
>emb|AJ272121.1|ATH272121 Arabidopsis thaliana mRNA for beta1,2-xylosyltransferase Length = 1605 Score = 42.1 bits (21), Expect = 6.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 662 ttctttcaccattgggctacgagactgctctatttaa 698 |||||||||||||||| ||||| || ||||| ||||| Sbjct: 935 ttctttcaccattgggatacgaaaccgctctttttaa 971
>emb|AJ251384.1|HSA251384 Homo sapiens mRNA for Nogo-B protein (Nogo gene) Length = 1122 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 516 ggtggaggggggcgcggcggg 496
>emb|AJ251383.1|HSA251383 Homo sapiens mRNA for Nogo-A protein (Nogo gene) Length = 3579 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 516 ggtggaggggggcgcggcggg 496
>ref|NM_001017286.2| Xenopus tropicalis hypothetical protein LOC550040 (LOC550040), mRNA emb|CR855697.2| Xenopus tropicalis finished cDNA, clone TGas097h22 Length = 1013 Score = 42.1 bits (21), Expect = 6.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1631 atcaaactgtaattgtaattttata 1655 ||||||||||| ||||||||||||| Sbjct: 947 atcaaactgtatttgtaattttata 971
>gb|AF132047.1|AF132047 Homo sapiens foocen-m mRNA, complete cds Length = 2276 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 695 ggtggaggggggcgcggcggg 675
>emb|AL135999.4|CNS01DVP Human chromosome 14 DNA sequence BAC R-66N24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 196311 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 agcgcactccggcggccggcg 42 ||||||||||||||||||||| Sbjct: 73497 agcgcactccggcggccggcg 73477
>dbj|AB058734.1| Homo sapiens mRNA for KIAA1831 protein, partial cds Length = 4278 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 agcgcactccggcggccggcg 42 ||||||||||||||||||||| Sbjct: 1421 agcgcactccggcggccggcg 1441
>dbj|AB040463.1| Homo sapiens mRNA for RTN-xS, complete cds Length = 1709 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 760 ggtggaggggggcgcggcggg 740
>dbj|AB040462.1| Homo sapiens mRNA for RTN-xL, complete cds Length = 4166 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 760 ggtggaggggggcgcggcggg 740
>dbj|AB015639.1| Homo sapiens ASY mRNA, complete cds Length = 2052 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 ggtggaggggggcgcggcggg 290 ||||||||||||||||||||| Sbjct: 582 ggtggaggggggcgcggcggg 562
>gb|AC133141.2| Homo sapiens chromosome 3 clone RP11-421F9, complete sequence Length = 70560 Score = 42.1 bits (21), Expect = 6.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1514 tttctgctgccagatgtagaa 1534 ||||||||||||||||||||| Sbjct: 67367 tttctgctgccagatgtagaa 67347 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 292,963,110 Number of extensions: 17018003 Number of successful extensions: 700810 Number of sequences better than 10.0: 104 Number of HSP's gapped: 700799 Number of HSP's successfully gapped: 155 Length of query: 1721 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1698 Effective length of database: 18,503,978,556 Effective search space: 31419755588088 Effective search space used: 31419755588088 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
