No.
Definition
Score (bits)
E Value
1 gb|BT008960.1| Triticum aestivum clone wdk1c.pk012.i2:fis, full ...
4100
0.0
2 gb|BT009411.1| Triticum aestivum clone wlm96.pk061.n18:fis, full...
1370
0.0
3 ref|NM_001049257.1| Oryza sativa (japonica cultivar-group) Os01g...
769
0.0
4 dbj|AK121307.1| Oryza sativa (japonica cultivar-group) cDNA clon...
761
0.0
5 dbj|AK064813.1| Oryza sativa (japonica cultivar-group) cDNA clon...
761
0.0
6 gb|AY109357.1| Zea mays CL881_1 mRNA sequence
353
3e-93
7 ref|NM_001058650.1| Oryza sativa (japonica cultivar-group) Os04g...
343
2e-90
8 dbj|AK122078.1| Oryza sativa (japonica cultivar-group) cDNA clon...
343
2e-90
9 dbj|AK119248.1| Oryza sativa (japonica cultivar-group) cDNA clon...
343
2e-90
10 dbj|AK104539.1| Oryza sativa (japonica cultivar-group) cDNA clon...
335
6e-88
11 dbj|AK060907.1| Oryza sativa (japonica cultivar-group) cDNA clon...
335
6e-88
12 dbj|AK065274.1| Oryza sativa (japonica cultivar-group) cDNA clon...
327
1e-85
13 dbj|AK061675.1| Oryza sativa (japonica cultivar-group) cDNA clon...
256
4e-64
14 gb|AY111526.1| Zea mays CL881_3 mRNA sequence
186
3e-43
15 gb|BT009560.1| Triticum aestivum clone wre1n.pk0001.h6:fis, full...
161
2e-35
16 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
147
3e-31
17 dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic D...
147
3e-31
18 ref|NM_001049256.1| Oryza sativa (japonica cultivar-group) Os01g...
107
3e-19
19 emb|CR855037.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
94
4e-15
20 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
94
4e-15
21 emb|AL606693.3|OSJN00109 Oryza sativa genomic DNA, chromosome 4,...
94
4e-15
22 emb|AL606655.3|OSJN00103 Oryza sativa genomic DNA, chromosome 4,...
94
4e-15
23 dbj|AP004499.1| Lotus japonicus genomic DNA, chromosome 1, clone...
94
4e-15
24 gb|BT018108.1| Zea mays clone EL01N0553E01.c mRNA sequence
92
1e-14
25 gb|AY104211.1| Zea mays PCO124720 mRNA sequence
92
1e-14
26 gb|BT013764.1| Lycopersicon esculentum clone 132647R, mRNA sequence
84
4e-12
27 ref|NM_122122.2| Arabidopsis thaliana unknown protein (AT5G21150...
78
2e-10
28 dbj|AK221864.1| Arabidopsis thaliana mRNA for zwille/pinhead-lik...
78
2e-10
29 dbj|AK118258.1| Arabidopsis thaliana At5g21150 mRNA for putative...
78
2e-10
30 gb|AC131455.5| Medicago truncatula clone mth1-42h9, complete seq...
76
9e-10
31 gb|DQ321491.1| Nicotiana benthamiana AGO4-2 mRNA, partial cds
76
9e-10
32 gb|AC124972.41| Medicago truncatula clone mth2-24j4, complete se...
76
9e-10
33 emb|AJ544236.1|ATH544236 Arabidopsis thaliana mRNA for ARGONAUTE...
70
5e-08
34 gb|AC140977.1| Arabidopsis thaliana chromosome 5 BAC F13M11 geno...
68
2e-07
35 gb|AC069325.6|AC069325 Genomic Sequence For Arabidopsis thaliana...
68
2e-07
36 ref|NM_122111.2| Arabidopsis thaliana unknown protein (AT5G21030...
66
9e-07
37 gb|DQ321490.1| Nicotiana benthamiana AGO4-1 mRNA, partial cds
66
9e-07
38 ref|NM_128262.2| Arabidopsis thaliana AGO4 (ARGONAUTE 4) (AGO4) ...
62
1e-05
39 gb|AY051033.1| Arabidopsis thaliana putative argonaute AGO1 prot...
62
1e-05
40 gb|AY035081.1| Arabidopsis thaliana putative Argonaute (AGO1) pr...
62
1e-05
41 emb|BX820023.1|CNS0A9EM Arabidopsis thaliana Full-length cDNA Co...
62
1e-05
42 ref|NM_001065870.1| Oryza sativa (japonica cultivar-group) Os07g...
52
0.013
43 gb|AC189571.1| Brassica rapa subsp. pekinensis clone KBrH010F07,...
52
0.013
44 gb|AY323483.1| Oryza sativa (japonica cultivar-group) zwille pin...
52
0.013
45 gb|AY072819.1| Oryza sativa zwille/pinhead-like protein mRNA, pa...
52
0.013
46 gb|DQ068741.1| Picea glauca argonaute/Zwille-like protein mRNA, ...
52
0.013
47 gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1
52
0.013
48 dbj|AK101842.1| Oryza sativa (japonica cultivar-group) cDNA clon...
52
0.013
49 gb|AC005623.3| Arabidopsis thaliana chromosome 2 clone T20P8 map...
50
0.051
50 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
50
0.051
51 dbj|AP000837.1| Oryza sativa (japonica cultivar-group) genomic D...
50
0.051
52 dbj|AP006465.4| Oryza sativa (japonica cultivar-group) genomic D...
50
0.051
53 dbj|AP006447.4| Oryza sativa (japonica cultivar-group) genomic D...
50
0.051
54 gb|AC141114.14| Medicago truncatula clone mth2-8g20, complete se...
48
0.20
55 gb|AC155881.2| Medicago truncatula chromosome 7 BAC clone mte1-6...
48
0.20
56 emb|CT030192.6| M.truncatula DNA sequence from clone MTH2-16D16 ...
48
0.20
57 gb|AC188455.2| Mus musculus BAC clone RP23-248O14 from chromosom...
46
0.79
58 gb|AC156027.2| Mus musculus BAC clone RP23-55O17 from chromosome...
46
0.79
59 emb|CT832217.1| Oryza sativa (indica cultivar-group) cDNA clone:...
44
3.1
60 ref|XM_001226466.1| Chaetomium globosum CBS 148.51 hypothetical ...
44
3.1
61 ref|XM_780694.2| PREDICTED: Strongylocentrotus purpuratus hypoth...
44
3.1
62 ref|XM_001203785.1| PREDICTED: Strongylocentrotus purpuratus hyp...
44
3.1
63 ref|NM_001061706.1| Oryza sativa (japonica cultivar-group) Os05g...
44
3.1
64 gb|AC175452.4| Myotis lucifugus, clone XX-29884657P1, complete s...
44
3.1
65 gb|AC121875.2| Mus musculus BAC clone RP24-125O20 from 17, compl...
44
3.1
66 gb|AC121932.2| Mus musculus BAC clone RP24-205N24 from 17, compl...
44
3.1
67 gb|AC163199.8| Mus musculus 6 BAC RP23-333F8 (Roswell Park Cance...
44
3.1
68 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
44
3.1
69 emb|AL391143.1|ATT20K14 Arabidopsis thaliana DNA chromosome 5, B...
44
3.1
70 dbj|AP004762.3| Oryza sativa (japonica cultivar-group) genomic D...
44
3.1
71 dbj|AK105270.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
3.1
72 dbj|AK071944.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
3.1
73 emb|AL935142.8| Zebrafish DNA sequence from clone CH211-227M23, ...
44
3.1
74 emb|Y18831.1|BTAY18831 Bos taurus partial IGF-1 gene
44
3.1
75 emb|AL133167.4|CNS01DU1 Human chromosome 14 DNA sequence BAC R-1...
44
3.1
76 gb|U01338.1|U01338 Bos taurus insulin-like growth factor 1 gene,...
44
3.1
>gb|AY109357.1 | Zea mays CL881_1 mRNA sequence
Length = 3158
Score = 353 bits (178), Expect = 3e-93
Identities = 493/598 (82%)
Strand = Plus / Plus
Query: 1806 caatgagacgtgcacctgctccaaaaagggttgaggatatgtttgagcaagtgaagtcta 1865
|||||||||| |||||||| || ||||||||| || |||||||| |||||||| |||
Sbjct: 1717 caatgagacggtcacctgctataagaagggttgaagacatgtttgaacaagtgaaaacta 1776
Query: 1866 aacttcctggggctcccaagtttctgttgtgtgtccttgccgagaggaagaactctgatg 1925
| |||||||| || || |||||||| |||||||| || || || |||||||| ||||||
Sbjct: 1777 agcttcctggagcaccaaagtttcttttgtgtgttctagctgaaaggaagaattctgata 1836
Query: 1926 tttatggtccatggaagcgaaaatgccttgctgactttgggattgtcactcaatgtgtgg 1985
||||||| || |||||| |||||||||||||| |||||||| || || ||||||||||
Sbjct: 1837 tttatgggccttggaagaagaaatgccttgctgaatttgggatcgttacacaatgtgtgg 1896
Query: 1986 ccccaacaagggtcaatgaccaatatctgacaaatgttttgctgaagatcaatgcaaaac 2045
| ||||| || || || ||||| ||||| |||||||| | || ||||| |||||||| |
Sbjct: 1897 caccaactagagtgaacgaccagtatcttacaaatgtcctacttaagataaatgcaaagc 1956
Query: 2046 ttggtggaatgaactcactgctacaaattgaaatgtccccaagtatacctcttgtatcaa 2105
| ||||| ||||| || |||| |||||||||| |||||| || ||||||||||| |
Sbjct: 1957 tgggtggcatgaattcgttgctccaaattgaaacatccccagcaattcctcttgtatcca 2016
Query: 2106 aggtcccaactctcatcttgggaatggatgtgtcccatggatcccctggacagtctgata 2165
||||||||||| | |||||||||||||||||||| || || || |||||||| ||||||
Sbjct: 2017 aggtcccaactataatcttgggaatggatgtgtcacacggttctcctggacattctgatg 2076
Query: 2166 taccatccattgcagcagttgttggttctcgagaatggccccttgtctcgaaatataggg 2225
||||||| ||||| || |||||| ||||||| |||||||| ||| |||||||||| || |
Sbjct: 2077 taccatctattgctgctgttgttagttctcgtgaatggcctcttatctcgaaatacagag 2136
Query: 2226 cttcagtgcgctcgcagtcaccaaagctagaaatgatagattcattgttcaagccacaag 2285
|||| || ||| | || ||||| || | |||||||| || |||||||| ||||||| |
Sbjct: 2137 cttctgtccgcacccaatcacctaaaatggaaatgattgactcattgtttaagccacggg 2196
Query: 2286 gaactgaagatgatggccttgttcgggagtgtctcattgacttctacaccagttctggaa 2345
| ||||||||||||| || | ||||||||||| ||||||||||||||||||||||| |
Sbjct: 2197 aagctgaagatgatggtctgatccgggagtgtctgattgacttctacaccagttctggga 2256
Query: 2346 agagaaaaccagatcagatcatcatcttcagggatggtgttagcgagagccagtttaa 2403
||||||| || || || | ||||| |||||||| ||||||||||| || ||||||||
Sbjct: 2257 agagaaagcctgaccaagttatcatattcagggacggtgttagcgaaagtcagtttaa 2314
Score = 230 bits (116), Expect = 3e-56
Identities = 224/260 (86%)
Strand = Plus / Plus
Query: 2573 gtctgccatccaaggaattatgacttttacatgtgcgctcatgctggaatgattgggaca 2632
||||||||||||| ||| | || || |||||||| || |||||||||||||| |||||
Sbjct: 2484 gtctgccatccaaagaacttcgatttctacatgtgtgcgcatgctggaatgatcgggact 2543
Query: 2633 acaaggccaacacattaccatatcctgcatgatgagatacactttgccgcggatgacctg 2692
|| |||||||| || ||||| |||||||||||||||||| ||| | ||||| |||
Sbjct: 2544 acgaggccaactcactaccacatcctgcatgatgagataggcttcagtcctgatgatctg 2603
Query: 2693 caggatcttgtgcattcgctctcttatgtgtaccaaaggagcacaacagcaatatcagtt 2752
||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2604 caggagctggtgcattcgctctcttatgtgtaccaaaggagcacaacagccatatcagtc 2663
Query: 2753 gtttctccaatctgctatgcacatcttgcagctgctcaggtggcgcagttcataaagttt 2812
||| |||| |||||||| |||||||| |||||||||||||| | ||||||||||||||
Sbjct: 2664 gttgctcccatctgctacgcacatctggcagctgctcaggttggccagttcataaagttc 2723
Query: 2813 gatgagatgtccgagacgtc 2832
||||||||||| ||||||||
Sbjct: 2724 gatgagatgtcggagacgtc 2743
Score = 107 bits (54), Expect = 3e-19
Identities = 202/253 (79%)
Strand = Plus / Plus
Query: 429 accattactatgtaaatctgaagtatgaagatgacaggcctgttgatggaaaaggtgttg 488
||||||||||||| ||| |||||||||||||||| | || |||||| | ||||| |
Sbjct: 343 accattactatgtcaatttgaagtatgaagatgatacaccggttgatcgcaaagggtcag 402
Query: 489 gtagaaaagtcattgataaactgcagcagacttatgcatctgatctagctcataaagact 548
| || ||||| |||| |||||||| |||||||| |||| || || ||||||| |
Sbjct: 403 gaaggaaagtgattgnnnnnctgcagcaaacttatgctgctgaacttgcaaataaagatt 462
Query: 549 ttgcctatgatggtgaaaagagtctttttaccattggcgcccttccacaaatcaacaatg 608
|||||||||||||||| ||||| || || || ||||| || ||||| ||| | || | ||
Sbjct: 463 ttgcctatgatggtgagaagagcctgttcacaattggtgctcttcctcaagttaaaattg 522
Query: 609 agtttgttgtggttcttgaagacttttccactggaaagactcctgcaaatggcagccctg 668
||||| ||| || |||||||| |||| |||||||||||||||||||||||||| || |
Sbjct: 523 agtttactgtcgtggttgaagacgtttcaactggaaagactcctgcaaatggcagtccag 582
Query: 669 gaaatgacagtcc 681
| ||||| |||||
Sbjct: 583 gcaatgatagtcc 595
Score = 105 bits (53), Expect = 1e-18
Identities = 315/404 (77%)
Strand = Plus / Plus
Query: 1298 tactctggtgatttcccttgtataaatgttgggaaacctaagcggccaacgtattttccc 1357
|||||||||||| | ||||| || ||||| || |||| ||||||||||| ||||||||
Sbjct: 1209 tactctggtgatcttccttgcatcaatgtgggaaaactaaagcggccaacatattttcca 1268
Query: 1358 atcgagctctgccagctggtgcctttgcaaaggtacaccaaatctttgagtaccctacaa 1417
|| ||| | ||| || |||||||| ||||| ||||| ||| |||||| || || ||
Sbjct: 1269 attgagttatgcagtcttgtgcctttacaaagatacactaaagctttgaacacacttcag 1328
Query: 1418 agatcatctcttgttgagaagtccaggcagaagcctcaagagaggatgtcagttttgtct 1477
|| ||||| || || ||||| || |||||||| || || || |||||||| ||||| |||
Sbjct: 1329 aggtcatcactcgtggagaaatctaggcagaaaccgcaggaaaggatgtctgttttatct 1388
Query: 1478 gatgtgctgaagcgcagcagctatgatacagaacccatgctgagggcatgtggaatttca 1537
||||||||| | | |||| ||||||| |||| |||||| ||| |||||| || ||| ||
Sbjct: 1389 gatgtgctgcaaagaagcaactatgatgcagagcccatgttgaaggcatgcgggattaca 1448
Query: 1538 atagctcaaggttttacacaggtggctggtagggtactgcaggctcccaagctcaaagct 1597
|| ||| | ||| ||| | || | |||||||||| ||||| | || ||||| ||||||
Sbjct: 1449 attgctagaaatttcacagaagttgatggtagggtattgcagccacctaagcttaaagct 1508
Query: 1598 ggaaatggtgaagatattttcacaaggaatgggcgttggaatttcaacaacaagaggctt 1657
|| ||||||||||| | ||| | ||||| | ||||| |||||||| ||||||||
Sbjct: 1509 gggaatggtgaagacannnnnacacgcaatggtagatggaacttcaacaataagaggctc 1568
Query: 1658 gctagagcttgtgtcgtggacagatgggcggtggttaacttttc 1701
|||||||||| || || | |||||||||||| ||||||||
Sbjct: 1569 attagagcttgtagtgtcgagaaatgggcggtggtaaacttttc 1612
Score = 91.7 bits (46), Expect = 1e-14
Identities = 148/182 (81%)
Strand = Plus / Plus
Query: 947 agaggtttccactcaagctttcgagccacacagagtgggctttctctcaatattgatgtt 1006
|||||||| || || || |||||||| || |||||||| ||||| |||||||| |||||
Sbjct: 864 agaggttttcattctagttttcgagcaacccagagtggactttcactcaatatcgatgtg 923
Query: 1007 tctaccacaatgattgtgaaacctggacctgttgttgattttctgctggccaaccagaag 1066
|| || |||||||| ||||||||||| ||||| |||| |||||| | ||||| |||||
Sbjct: 924 tcgactacaatgatagtgaaacctggtcctgtcattgactttctgattgccaatcagaaa 983
Query: 1067 gttgaccaccctaacaaaattgattggcctaaggccaagcgtgcactcaagaatttaagg 1126
||| | | || | || ||||||||| |||||| |||||||||||| ||||| || |||
Sbjct: 984 gttaatgatccaagcatgattgattgggctaagggcaagcgtgcactgaagaacttgagg 1043
Query: 1127 at 1128
||
Sbjct: 1044 at 1045
Score = 58.0 bits (29), Expect = 2e-04
Identities = 101/125 (80%)
Strand = Plus / Plus
Query: 794 caggaatcagagcacacgcaagaagccattcgggttattgatatcatattgaggcaacac 853
||||| ||||||||||| || ||||| ||||| || ||||| || || ||||||| |||
Sbjct: 711 caggagtcagagcacactcaggaagcaattcgagtgattgacattattctgaggcagcac 770
Query: 854 tctgccaaacagggctgcctgttagtccgtcagtcattttttcacaacaatccttcaaac 913
|| || || ||||| ||||| ||||| | || ||||| || |||||||||||||| ||
Sbjct: 771 tcagctaagcagggttgcctattagtaaggcaatcattcttccacaacaatccttccaat 830
Query: 914 tttgt 918
|||||
Sbjct: 831 tttgt 835
Score = 46.1 bits (23), Expect = 0.79
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 1736 ctcatcaagtgtggggccatgaagggcatta 1766
|||||||||||||| | ||||||||||||||
Sbjct: 1647 ctcatcaagtgtggaggcatgaagggcatta 1677
>ref|NM_001058650.1 | Oryza sativa (japonica cultivar-group) Os04g0151800 (Os04g0151800)
mRNA, complete cds
Length = 3384
Score = 343 bits (173), Expect = 2e-90
Identities = 622/769 (80%), Gaps = 2/769 (0%)
Strand = Plus / Plus
Query: 2028 tgaagatcaatgcaaaacttggtggaatgaactcactgctacaaattgaaatgtccccaa 2087
||||||| ||||| || ||||||||||| |||||| |||| ||||||||| |||||
Sbjct: 2135 tgaagataaatgccaagcttggtggaataaactcattgctgcaaattgaagcatcccctt 2194
Query: 2088 gtatacctcttgtatcaaaggtcccaactctcatcttgggaatggatgtgtcccatggat 2147
|||||||||||||| ||| || || ||||||| || ||||||||||| || ||
Sbjct: 2195 caatacctcttgtatcgaagacacctaccatcatcttaggtatggatgtgtcacacggtc 2254
Query: 2148 cccctggacagtctgatataccatccattgcagcagttgttggttctcgagaatggcccc 2207
|| ||||| ||||||| ||| |||||||| || || ||| | ||||| ||||||| |
Sbjct: 2255 aaccaggacaatctgatagaccttccattgctgcggtggttagctctcgccaatggcctc 2314
Query: 2208 ttgtctcgaaatatagggcttcagtgcgctcgcagtcaccaaagctagaaatgatagatt 2267
| |||| ||||| || || || |||| | | |||||||| |||||||||||||| ||
Sbjct: 2315 tcatctctaaatacagagcatcggtgcacactcagtcacctaagctagaaatgatgtctt 2374
Query: 2268 cattgttcaagccacaaggaactgaagatgatggccttgttcgggagtgtctcattgact 2327
| ||||| ||||||| ||||||||||||||||||||| ||||||| | || |||||||
Sbjct: 2375 ccttgtttaagccacgaggaactgaagatgatggcctcattcgggaatcgctgattgact 2434
Query: 2328 tctacaccagttctggaaagagaaaaccagatcagatcatcatcttcagggatggtgtta 2387
||||||| ||||||||||| | ||||| ||||| | ||| | ||||||||||| ||||
Sbjct: 2435 tctacactagttctggaaaacggaaaccggatcatgttatcgttttcagggatggagtta 2494
Query: 2388 gcgagagccagtttaatcaggtgctgaacatcgaattagatcaaattattgaggcctgca 2447
| || |||||||||| |||||| | ||||| || | ||||| || |||||||| ||||
Sbjct: 2495 gtgaaagccagtttactcaggtcattaacattgagcttgatcagatcattgaggcatgca 2554
Query: 2448 agttcttggatgaaaattggaaccccaagttcacactgattgttgctcagaagaatcacc 2507
| || | ||||| || ||| || ||||||||| |||||||||||||||||||||| |
Sbjct: 2555 aatttctcgatgagaagtggtcaccaaagttcacagtgattgttgctcagaagaatcatc 2614
Query: 2508 acac-aaagtttttcatgcctggatctcctgacaatgtccctcctggcactgttgttgat 2566
| || ||| ||||||| | |||||||||| || ||||| || || || |||||||| ||
Sbjct: 2615 ataccaaattttttca-gtctggatctccagataatgttccgccaggtactgttgtggac 2673
Query: 2567 aatgctgtctgccatccaaggaattatgacttttacatgtgcgctcatgctggaatgatt 2626
|| || ||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 2674 aaacaagtgtgccatccaaggaattatgacttctacatgtgtgctcatgctggaatgatt 2733
Query: 2627 gggacaacaaggccaacacattaccatatcctgcatgatgagatacactttgccgcggat 2686
|| || || |||||||||||||| ||| | ||||| ||||||||| || || | |||
Sbjct: 2734 ggaacgacgaggccaacacattatcatgttctgcacgatgagataggtttctcccctgat 2793
Query: 2687 gacctgcaggatcttgtgcattcgctctcttatgtgtaccaaaggagcacaacagcaata 2746
|| |||||||| || ||||| || |||||||||||||| || || ||||||||||| |||
Sbjct: 2794 gatctgcaggagctagtgcactcactctcttatgtgtatcagagaagcacaacagccata 2853
Query: 2747 tcagttgtttctccaatctgctatgcacatcttgcagctgctcaggtgg 2795
||||||||| |||| || |||||||| |||||||| |||||||||||||
Sbjct: 2854 tcagttgttgctccgatttgctatgcccatcttgctgctgctcaggtgg 2902
Score = 297 bits (150), Expect = 1e-76
Identities = 517/638 (81%), Gaps = 6/638 (0%)
Strand = Plus / Plus
Query: 545 gactttgcctatgatggtgaaaagagtctttttaccattggcgcccttccacaaatcaac 604
|||||||||||||||||||||||||| || ||||| ||||| || ||||||||| | |
Sbjct: 646 gactttgcctatgatggtgaaaagagcctgtttacaattggtgctcttccacaagtaact 705
Query: 605 aatgagtttgttgtggttcttgaagacttttccactggaaagactcctgcaaatggcagc 664
|||||||| ||||| | || || |||| |||||||||||| |||| ||||| |||
Sbjct: 706 aatgagttcacagtggtgttggaggatgtttcaactggaaagactgctgccaatggaagc 765
Query: 665 cctgga---aatgacagtccagga---aatgacaagaagagagtgaaaaggccatatcag 718
|||||| |||||||| || ||| | ||||| ||||||||| | || ||||| |||
Sbjct: 766 cctggaggtaatgacagccctggaggtagtgacaggaagagagttaggagaccataccag 825
Query: 719 actaaaactttcaaggtggagttaagctttgcagctagaatccccatgagtgctattgca 778
|| || |||||||| |||||| | |||||||||| | ||||| |||| ||| |||||
Sbjct: 826 accaagactttcaaagtggagctgtgctttgcagcaaagatccctatgaatgcaattgct 885
Query: 779 atggcactaaaaggacaggaatcagagcacacgcaagaagccattcgggttattgatatc 838
||| ||||||| || ||||||||| || | |||||||| | | ||| |||||||
Sbjct: 886 caggccataaaaggtcaagaatcagagaactcccaagaagctctcagagttcttgatata 945
Query: 839 atattgaggcaacactctgccaaacagggctgcctgttagtccgtcagtcattttttcac 898
||||| ||||| |||||||| |||||||||||||| ||||| || ||||||||||| |||
Sbjct: 946 atattaaggcagcactctgctaaacagggctgccttttagtacgccagtcatttttccac 1005
Query: 899 aacaatccttcaaactttgtggacttgggtggaggggtaatgggctgcagaggtttccac 958
||||||||| |||||||| ||| ||||||| || || |||||||| |||| |||||
Sbjct: 1006 aacaatcctaataactttgttgacctgggtggtggtgtgatgggctgtcgaggattccat 1065
Query: 959 tcaagctttcgagccacacagagtgggctttctctcaatattgatgtttctaccacaatg 1018
||||| || || | |||||||||||| |||||||| ||||| |||||||| || || |||
Sbjct: 1066 tcaagtttccgtggcacacagagtggactttctctgaatatcgatgtttcgacaactatg 1125
Query: 1019 attgtgaaacctggacctgttgttgattttctgctggccaaccagaaggttgaccaccct 1078
||||| |||||||| |||||| | |||||||| || ||||||||||| ||||| ||||||
Sbjct: 1126 attgttaaacctggtcctgttatcgattttcttcttgccaaccagaaagttgatcaccct 1185
Query: 1079 aacaaaattgattggcctaaggccaagcgtgcactcaagaatttaaggataaaaacaagc 1138
||| ||||||||||| |||||||||||||| |||||||| || ||||||| ||| | |
Sbjct: 1186 gacagaattgattggcaaaaggccaagcgtgctctcaagaacttgaggataagaaccacc 1245
Query: 1139 ccagcaaatacagaatacaagattgttggtttgagtga 1176
|| | ||| |||||| |||||| |||||||||||||
Sbjct: 1246 cctgtgaattcagaattcaagatcattggtttgagtga 1283
Score = 60.0 bits (30), Expect = 5e-05
Identities = 114/142 (80%)
Strand = Plus / Plus
Query: 1511 cccatgctgagggcatgtggaatttcaatagctcaaggttttacacaggtggctggtagg 1570
|||||| ||||||||| ||| |||||||| || ||| |||||| || || | || |||
Sbjct: 1618 cccatgttgagggcatctggcatttcaattgcccaaaattttactcaagttgaaggaagg 1677
Query: 1571 gtactgcaggctcccaagctcaaagctggaaatggtgaagatattttcacaaggaatggg 1630
|| ||||| | || ||||| |||||||| |||||||||||||| ||| || | |||||
Sbjct: 1678 gtcctgcaacccccaaagctgaaagctggcaatggtgaagatatattcccacgcaatggt 1737
Query: 1631 cgttggaatttcaacaacaaga 1652
|| ||||| |||||||| ||||
Sbjct: 1738 cggtggaacttcaacaataaga 1759
Score = 56.0 bits (28), Expect = 8e-04
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 445 tctgaagtatgaagatgacaggcctgttgatggaaaaggtgttggtagaaaagtcattga 504
|||||||||||| ||||| | || |||||||| ||||| || ||| |||| || |||||
Sbjct: 546 tctgaagtatgaggatgatcgaccggttgatgggaaaggggtaggtcgaaaggtgattga 605
Query: 505 taaactgcagca 516
||||||||||||
Sbjct: 606 taaactgcagca 617
Score = 52.0 bits (26), Expect = 0.013
Identities = 125/158 (79%)
Strand = Plus / Plus
Query: 1313 ccttgtataaatgttgggaaacctaagcggccaacgtattttcccatcgagctctgccag 1372
||||| |||||||| |||||||| ||||| ||||| |||||||| || ||||| |||
Sbjct: 1420 ccttgcataaatgtggggaaaccaaagcgtccaacttattttccaatagagctatgctct 1479
Query: 1373 ctggtgcctttgcaaaggtacaccaaatctttgagtaccctacaaagatcatctcttgtt 1432
|| | || | ||||| ||||||||| ||||| || || ||||| || || ||||||
Sbjct: 1480 cttattccactacaaagatacaccaaagctttgtcaacactgcaaaggtcctcccttgtt 1539
Query: 1433 gagaagtccaggcagaagcctcaagagaggatgtcagt 1470
||||| ||||| |||||||| || || || ||||||||
Sbjct: 1540 gagaaatccagacagaagccccaggaaagaatgtcagt 1577
Score = 48.1 bits (24), Expect = 0.20
Identities = 111/140 (79%)
Strand = Plus / Plus
Query: 1841 gatatgtttgagcaagtgaagtctaaacttcctggggctcccaagtttctgttgtgtgtc 1900
||||||||||| || | || || ||||||||||| ||||| || || || ||||| |
Sbjct: 1948 gatatgtttgaacagataaaatcgaaacttcctggagctccgaaattcctcttgtgcctt 2007
Query: 1901 cttgccgagaggaagaactctgatgtttatggtccatggaagcgaaaatgccttgctgac 1960
||| | |||||||| || | ||| ||||||||||| |||||| | || || ||||||||
Sbjct: 2008 cttcctgagaggaaaaattgtgaagtttatggtccttggaagaggaagtgtcttgctgaa 2067
Query: 1961 tttgggattgtcactcaatg 1980
|| || |||||||| |||||
Sbjct: 2068 ttcggtattgtcacacaatg 2087
Score = 48.1 bits (24), Expect = 0.20
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 2873 ccggtgcaggagctgcctcgtctccatgagaaagtccgcagcagcatgttcttctgctga 2932
||||||| ||||||||||| |||||||||||||| | ||| |||||| |||||||||
Sbjct: 2977 ccggtgcctgagctgcctcgcctccatgagaaagtgaggagctccatgtttttctgctga 3036
>dbj|AK122078.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033119H08, full
insert sequence
Length = 3385
Score = 343 bits (173), Expect = 2e-90
Identities = 622/769 (80%), Gaps = 2/769 (0%)
Strand = Plus / Plus
Query: 2028 tgaagatcaatgcaaaacttggtggaatgaactcactgctacaaattgaaatgtccccaa 2087
||||||| ||||| || ||||||||||| |||||| |||| ||||||||| |||||
Sbjct: 2136 tgaagataaatgccaagcttggtggaataaactcattgctgcaaattgaagcatcccctt 2195
Query: 2088 gtatacctcttgtatcaaaggtcccaactctcatcttgggaatggatgtgtcccatggat 2147
|||||||||||||| ||| || || ||||||| || ||||||||||| || ||
Sbjct: 2196 caatacctcttgtatcgaagacacctaccatcatcttaggtatggatgtgtcacacggtc 2255
Query: 2148 cccctggacagtctgatataccatccattgcagcagttgttggttctcgagaatggcccc 2207
|| ||||| ||||||| ||| |||||||| || || ||| | ||||| ||||||| |
Sbjct: 2256 aaccaggacaatctgatagaccttccattgctgcggtggttagctctcgccaatggcctc 2315
Query: 2208 ttgtctcgaaatatagggcttcagtgcgctcgcagtcaccaaagctagaaatgatagatt 2267
| |||| ||||| || || || |||| | | |||||||| |||||||||||||| ||
Sbjct: 2316 tcatctctaaatacagagcatcggtgcacactcagtcacctaagctagaaatgatgtctt 2375
Query: 2268 cattgttcaagccacaaggaactgaagatgatggccttgttcgggagtgtctcattgact 2327
| ||||| ||||||| ||||||||||||||||||||| ||||||| | || |||||||
Sbjct: 2376 ccttgtttaagccacgaggaactgaagatgatggcctcattcgggaatcgctgattgact 2435
Query: 2328 tctacaccagttctggaaagagaaaaccagatcagatcatcatcttcagggatggtgtta 2387
||||||| ||||||||||| | ||||| ||||| | ||| | ||||||||||| ||||
Sbjct: 2436 tctacactagttctggaaaacggaaaccggatcatgttatcgttttcagggatggagtta 2495
Query: 2388 gcgagagccagtttaatcaggtgctgaacatcgaattagatcaaattattgaggcctgca 2447
| || |||||||||| |||||| | ||||| || | ||||| || |||||||| ||||
Sbjct: 2496 gtgaaagccagtttactcaggtcattaacattgagcttgatcagatcattgaggcatgca 2555
Query: 2448 agttcttggatgaaaattggaaccccaagttcacactgattgttgctcagaagaatcacc 2507
| || | ||||| || ||| || ||||||||| |||||||||||||||||||||| |
Sbjct: 2556 aatttctcgatgagaagtggtcaccaaagttcacagtgattgttgctcagaagaatcatc 2615
Query: 2508 acac-aaagtttttcatgcctggatctcctgacaatgtccctcctggcactgttgttgat 2566
| || ||| ||||||| | |||||||||| || ||||| || || || |||||||| ||
Sbjct: 2616 ataccaaattttttca-gtctggatctccagataatgttccgccaggtactgttgtggac 2674
Query: 2567 aatgctgtctgccatccaaggaattatgacttttacatgtgcgctcatgctggaatgatt 2626
|| || ||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 2675 aaacaagtgtgccatccaaggaattatgacttctacatgtgtgctcatgctggaatgatt 2734
Query: 2627 gggacaacaaggccaacacattaccatatcctgcatgatgagatacactttgccgcggat 2686
|| || || |||||||||||||| ||| | ||||| ||||||||| || || | |||
Sbjct: 2735 ggaacgacgaggccaacacattatcatgttctgcacgatgagataggtttctcccctgat 2794
Query: 2687 gacctgcaggatcttgtgcattcgctctcttatgtgtaccaaaggagcacaacagcaata 2746
|| |||||||| || ||||| || |||||||||||||| || || ||||||||||| |||
Sbjct: 2795 gatctgcaggagctagtgcactcactctcttatgtgtatcagagaagcacaacagccata 2854
Query: 2747 tcagttgtttctccaatctgctatgcacatcttgcagctgctcaggtgg 2795
||||||||| |||| || |||||||| |||||||| |||||||||||||
Sbjct: 2855 tcagttgttgctccgatttgctatgcccatcttgctgctgctcaggtgg 2903
Score = 297 bits (150), Expect = 1e-76
Identities = 517/638 (81%), Gaps = 6/638 (0%)
Strand = Plus / Plus
Query: 545 gactttgcctatgatggtgaaaagagtctttttaccattggcgcccttccacaaatcaac 604
|||||||||||||||||||||||||| || ||||| ||||| || ||||||||| | |
Sbjct: 647 gactttgcctatgatggtgaaaagagcctgtttacaattggtgctcttccacaagtaact 706
Query: 605 aatgagtttgttgtggttcttgaagacttttccactggaaagactcctgcaaatggcagc 664
|||||||| ||||| | || || |||| |||||||||||| |||| ||||| |||
Sbjct: 707 aatgagttcacagtggtgttggaggatgtttcaactggaaagactgctgccaatggaagc 766
Query: 665 cctgga---aatgacagtccagga---aatgacaagaagagagtgaaaaggccatatcag 718
|||||| |||||||| || ||| | ||||| ||||||||| | || ||||| |||
Sbjct: 767 cctggaggtaatgacagccctggaggtagtgacaggaagagagttaggagaccataccag 826
Query: 719 actaaaactttcaaggtggagttaagctttgcagctagaatccccatgagtgctattgca 778
|| || |||||||| |||||| | |||||||||| | ||||| |||| ||| |||||
Sbjct: 827 accaagactttcaaagtggagctgtgctttgcagcaaagatccctatgaatgcaattgct 886
Query: 779 atggcactaaaaggacaggaatcagagcacacgcaagaagccattcgggttattgatatc 838
||| ||||||| || ||||||||| || | |||||||| | | ||| |||||||
Sbjct: 887 caggccataaaaggtcaagaatcagagaactcccaagaagctctcagagttcttgatata 946
Query: 839 atattgaggcaacactctgccaaacagggctgcctgttagtccgtcagtcattttttcac 898
||||| ||||| |||||||| |||||||||||||| ||||| || ||||||||||| |||
Sbjct: 947 atattaaggcagcactctgctaaacagggctgccttttagtacgccagtcatttttccac 1006
Query: 899 aacaatccttcaaactttgtggacttgggtggaggggtaatgggctgcagaggtttccac 958
||||||||| |||||||| ||| ||||||| || || |||||||| |||| |||||
Sbjct: 1007 aacaatcctaataactttgttgacctgggtggtggtgtgatgggctgtcgaggattccat 1066
Query: 959 tcaagctttcgagccacacagagtgggctttctctcaatattgatgtttctaccacaatg 1018
||||| || || | |||||||||||| |||||||| ||||| |||||||| || || |||
Sbjct: 1067 tcaagtttccgtggcacacagagtggactttctctgaatatcgatgtttcgacaactatg 1126
Query: 1019 attgtgaaacctggacctgttgttgattttctgctggccaaccagaaggttgaccaccct 1078
||||| |||||||| |||||| | |||||||| || ||||||||||| ||||| ||||||
Sbjct: 1127 attgttaaacctggtcctgttatcgattttcttcttgccaaccagaaagttgatcaccct 1186
Query: 1079 aacaaaattgattggcctaaggccaagcgtgcactcaagaatttaaggataaaaacaagc 1138
||| ||||||||||| |||||||||||||| |||||||| || ||||||| ||| | |
Sbjct: 1187 gacagaattgattggcaaaaggccaagcgtgctctcaagaacttgaggataagaaccacc 1246
Query: 1139 ccagcaaatacagaatacaagattgttggtttgagtga 1176
|| | ||| |||||| |||||| |||||||||||||
Sbjct: 1247 cctgtgaattcagaattcaagatcattggtttgagtga 1284
Score = 60.0 bits (30), Expect = 5e-05
Identities = 114/142 (80%)
Strand = Plus / Plus
Query: 1511 cccatgctgagggcatgtggaatttcaatagctcaaggttttacacaggtggctggtagg 1570
|||||| ||||||||| ||| |||||||| || ||| |||||| || || | || |||
Sbjct: 1619 cccatgttgagggcatctggcatttcaattgcccaaaattttactcaagttgaaggaagg 1678
Query: 1571 gtactgcaggctcccaagctcaaagctggaaatggtgaagatattttcacaaggaatggg 1630
|| ||||| | || ||||| |||||||| |||||||||||||| ||| || | |||||
Sbjct: 1679 gtcctgcaacccccaaagctgaaagctggcaatggtgaagatatattcccacgcaatggt 1738
Query: 1631 cgttggaatttcaacaacaaga 1652
|| ||||| |||||||| ||||
Sbjct: 1739 cggtggaacttcaacaataaga 1760
Score = 56.0 bits (28), Expect = 8e-04
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 445 tctgaagtatgaagatgacaggcctgttgatggaaaaggtgttggtagaaaagtcattga 504
|||||||||||| ||||| | || |||||||| ||||| || ||| |||| || |||||
Sbjct: 547 tctgaagtatgaggatgatcgaccggttgatgggaaaggggtaggtcgaaaggtgattga 606
Query: 505 taaactgcagca 516
||||||||||||
Sbjct: 607 taaactgcagca 618
Score = 52.0 bits (26), Expect = 0.013
Identities = 125/158 (79%)
Strand = Plus / Plus
Query: 1313 ccttgtataaatgttgggaaacctaagcggccaacgtattttcccatcgagctctgccag 1372
||||| |||||||| |||||||| ||||| ||||| |||||||| || ||||| |||
Sbjct: 1421 ccttgcataaatgtggggaaaccaaagcgtccaacttattttccaatagagctatgctct 1480
Query: 1373 ctggtgcctttgcaaaggtacaccaaatctttgagtaccctacaaagatcatctcttgtt 1432
|| | || | ||||| ||||||||| ||||| || || ||||| || || ||||||
Sbjct: 1481 cttattccactacaaagatacaccaaagctttgtcaacactgcaaaggtcctcccttgtt 1540
Query: 1433 gagaagtccaggcagaagcctcaagagaggatgtcagt 1470
||||| ||||| |||||||| || || || ||||||||
Sbjct: 1541 gagaaatccagacagaagccccaggaaagaatgtcagt 1578
Score = 48.1 bits (24), Expect = 0.20
Identities = 111/140 (79%)
Strand = Plus / Plus
Query: 1841 gatatgtttgagcaagtgaagtctaaacttcctggggctcccaagtttctgttgtgtgtc 1900
||||||||||| || | || || ||||||||||| ||||| || || || ||||| |
Sbjct: 1949 gatatgtttgaacagataaaatcgaaacttcctggagctccgaaattcctcttgtgcctt 2008
Query: 1901 cttgccgagaggaagaactctgatgtttatggtccatggaagcgaaaatgccttgctgac 1960
||| | |||||||| || | ||| ||||||||||| |||||| | || || ||||||||
Sbjct: 2009 cttcctgagaggaaaaattgtgaagtttatggtccttggaagaggaagtgtcttgctgaa 2068
Query: 1961 tttgggattgtcactcaatg 1980
|| || |||||||| |||||
Sbjct: 2069 ttcggtattgtcacacaatg 2088
Score = 48.1 bits (24), Expect = 0.20
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 2873 ccggtgcaggagctgcctcgtctccatgagaaagtccgcagcagcatgttcttctgctga 2932
||||||| ||||||||||| |||||||||||||| | ||| |||||| |||||||||
Sbjct: 2978 ccggtgcctgagctgcctcgcctccatgagaaagtgaggagctccatgtttttctgctga 3037
>dbj|AK119248.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-121-C06, full
insert sequence
Length = 1885
Score = 343 bits (173), Expect = 2e-90
Identities = 622/769 (80%), Gaps = 2/769 (0%)
Strand = Plus / Plus
Query: 2028 tgaagatcaatgcaaaacttggtggaatgaactcactgctacaaattgaaatgtccccaa 2087
||||||| ||||| || ||||||||||| |||||| |||| ||||||||| |||||
Sbjct: 684 tgaagataaatgccaagcttggtggaataaactcattgctgcaaattgaagcatcccctt 743
Query: 2088 gtatacctcttgtatcaaaggtcccaactctcatcttgggaatggatgtgtcccatggat 2147
|||||||||||||| ||| || || ||||||| || ||||||||||| || ||
Sbjct: 744 caatacctcttgtatcgaagacacctaccatcatcttaggtatggatgtgtcacacggtc 803
Query: 2148 cccctggacagtctgatataccatccattgcagcagttgttggttctcgagaatggcccc 2207
|| ||||| ||||||| ||| |||||||| || || ||| | ||||| ||||||| |
Sbjct: 804 aaccaggacaatctgatagaccttccattgctgcggtggttagctctcgccaatggcctc 863
Query: 2208 ttgtctcgaaatatagggcttcagtgcgctcgcagtcaccaaagctagaaatgatagatt 2267
| |||| ||||| || || || |||| | | |||||||| |||||||||||||| ||
Sbjct: 864 tcatctctaaatacagagcatcggtgcacactcagtcacctaagctagaaatgatgtctt 923
Query: 2268 cattgttcaagccacaaggaactgaagatgatggccttgttcgggagtgtctcattgact 2327
| ||||| ||||||| ||||||||||||||||||||| ||||||| | || |||||||
Sbjct: 924 ccttgtttaagccacgaggaactgaagatgatggcctcattcgggaatcgctgattgact 983
Query: 2328 tctacaccagttctggaaagagaaaaccagatcagatcatcatcttcagggatggtgtta 2387
||||||| ||||||||||| | ||||| ||||| | ||| | ||||||||||| ||||
Sbjct: 984 tctacactagttctggaaaacggaaaccggatcatgttatcgttttcagggatggagtta 1043
Query: 2388 gcgagagccagtttaatcaggtgctgaacatcgaattagatcaaattattgaggcctgca 2447
| || |||||||||| |||||| | ||||| || | ||||| || |||||||| ||||
Sbjct: 1044 gtgaaagccagtttactcaggtcattaacattgagcttgatcagatcattgaggcatgca 1103
Query: 2448 agttcttggatgaaaattggaaccccaagttcacactgattgttgctcagaagaatcacc 2507
| || | ||||| || ||| || ||||||||| |||||||||||||||||||||| |
Sbjct: 1104 aatttctcgatgagaagtggtcgccaaagttcacagtgattgttgctcagaagaatcatc 1163
Query: 2508 acac-aaagtttttcatgcctggatctcctgacaatgtccctcctggcactgttgttgat 2566
| || ||| ||||||| | |||||||||| || ||||| || || || |||||||| ||
Sbjct: 1164 ataccaaattttttca-gtctggatctccagataatgttccgccaggtactgttgtggac 1222
Query: 2567 aatgctgtctgccatccaaggaattatgacttttacatgtgcgctcatgctggaatgatt 2626
|| || ||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 1223 aaacaagtgtgccatccaaggaattatgacttctacatgtgtgctcatgctggaatgatt 1282
Query: 2627 gggacaacaaggccaacacattaccatatcctgcatgatgagatacactttgccgcggat 2686
|| || || |||||||||||||| ||| | ||||| ||||||||| || || | |||
Sbjct: 1283 ggaacgacgaggccaacacattatcatgttctgcacgatgagataggtttctcccctgat 1342
Query: 2687 gacctgcaggatcttgtgcattcgctctcttatgtgtaccaaaggagcacaacagcaata 2746
|| |||||||| || ||||| || |||||||||||||| || || ||||||||||| |||
Sbjct: 1343 gatctgcaggagctagtgcactcactctcttatgtgtatcagagaagcacaacagccata 1402
Query: 2747 tcagttgtttctccaatctgctatgcacatcttgcagctgctcaggtgg 2795
||||||||| |||| || |||||||| |||||||| |||||||||||||
Sbjct: 1403 tcagttgttgctccgatttgctatgcccatcttgctgctgctcaggtgg 1451
Score = 60.0 bits (30), Expect = 5e-05
Identities = 114/142 (80%)
Strand = Plus / Plus
Query: 1511 cccatgctgagggcatgtggaatttcaatagctcaaggttttacacaggtggctggtagg 1570
|||||| ||||||||| ||| |||||||| || ||| |||||| || || | || |||
Sbjct: 167 cccatgttgagggcatctggcatttcaattgcccaaaattttactcaagttgaaggaagg 226
Query: 1571 gtactgcaggctcccaagctcaaagctggaaatggtgaagatattttcacaaggaatggg 1630
|| ||||| | || ||||| |||||||| |||||||||||||| ||| || | |||||
Sbjct: 227 gtcctgcaacccccaaagctgaaagctggcaatggtgaagatatattcccacgcaatggt 286
Query: 1631 cgttggaatttcaacaacaaga 1652
|| ||||| |||||||| ||||
Sbjct: 287 cggtggaacttcaacaataaga 308
Score = 48.1 bits (24), Expect = 0.20
Identities = 111/140 (79%)
Strand = Plus / Plus
Query: 1841 gatatgtttgagcaagtgaagtctaaacttcctggggctcccaagtttctgttgtgtgtc 1900
||||||||||| || | || || ||||||||||| ||||| || || || ||||| |
Sbjct: 497 gatatgtttgaacagataaaatcgaaacttcctggagctccgaaattcctcttgtgcctt 556
Query: 1901 cttgccgagaggaagaactctgatgtttatggtccatggaagcgaaaatgccttgctgac 1960
||| | |||||||| || | ||| ||||||||||| |||||| | || || ||||||||
Sbjct: 557 cttcctgagaggaaaaattgtgaagtttatggtccttggaagaggaagtgtcttgctgaa 616
Query: 1961 tttgggattgtcactcaatg 1980
|| || |||||||| |||||
Sbjct: 617 ttcggtattgtcacacaatg 636
Score = 48.1 bits (24), Expect = 0.20
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 2873 ccggtgcaggagctgcctcgtctccatgagaaagtccgcagcagcatgttcttctgctga 2932
||||||| ||||||||||| |||||||||||||| | ||| |||||| |||||||||
Sbjct: 1526 ccggtgcctgagctgcctcgcctccatgagaaagtgaggagctccatgtttttctgctga 1585
Score = 44.1 bits (22), Expect = 3.1
Identities = 70/86 (81%)
Strand = Plus / Plus
Query: 1385 caaaggtacaccaaatctttgagtaccctacaaagatcatctcttgttgagaagtccagg 1444
||||| ||||||||| ||||| || || ||||| || || ||||||||||| |||||
Sbjct: 41 caaagatacaccaaagctttgtcaacactgcaaaggtcctcccttgttgagaaatccaga 100
Query: 1445 cagaagcctcaagagaggatgtcagt 1470
|||||||| || || || ||||||||
Sbjct: 101 cagaagccccaggaaagaatgtcagt 126
>dbj|AK065274.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013002L10, full
insert sequence
Length = 3178
Score = 327 bits (165), Expect = 1e-85
Identities = 621/769 (80%), Gaps = 3/769 (0%)
Strand = Plus / Plus
Query: 2028 tgaagatcaatgcaaaacttggtggaatgaactcactgctacaaattgaaatgtccccaa 2087
||||||| ||||| || ||||||||||| |||||| |||| ||||||||| |||||
Sbjct: 1955 tgaagataaatgccaagcttggtggaataaactcattgctgcaaattgaagcatcccctt 2014
Query: 2088 gtatacctcttgtatcaaaggtcccaactctcatcttgggaatggatgtgtcccatggat 2147
|||||||||||||| ||| || || ||||||| || ||||||||||| || ||
Sbjct: 2015 caatacctcttgtatcgaagacacctaccatcatcttaggtatggatgtgtcacacggtc 2074
Query: 2148 cccctggacagtctgatataccatccattgcagcagttgttggttctcgagaatggcccc 2207
|| ||||| ||||||| ||| |||||||| || || ||| | ||||| ||||||| |
Sbjct: 2075 aaccaggacaatctgatagaccttccattgctgcggtggttagctctcgccaatggcctc 2134
Query: 2208 ttgtctcgaaatatagggcttcagtgcgctcgcagtcaccaaagctagaaatgatagatt 2267
| |||| ||||| || || || |||| | | |||||||| |||||||||||||| ||
Sbjct: 2135 tcatctctaaatacagagcatcggtgcacactcagtcacctaagctagaaatgatgtctt 2194
Query: 2268 cattgttcaagccacaaggaactgaagatgatggccttgttcgggagtgtctcattgact 2327
| ||||| ||||||| ||||||||||||||||||||| ||||||| | || |||||||
Sbjct: 2195 ccttgtttaagccacgaggaactgaagatgatggcctcattcgggaatcgctgattgact 2254
Query: 2328 tctacaccagttctggaaagagaaaaccagatcagatcatcatcttcagggatggtgtta 2387
||||||| ||||||||||| | ||||| ||||| | ||| | || |||||||| ||||
Sbjct: 2255 tctacactagttctggaaaacggaaaccggatcatgttatcgtttt-agggatggagtta 2313
Query: 2388 gcgagagccagtttaatcaggtgctgaacatcgaattagatcaaattattgaggcctgca 2447
| || |||||||||| |||||| | ||||| || | ||||| || |||||||| ||||
Sbjct: 2314 gtgaaagccagtttactcaggtcattaacattgagcttgatcagatcattgaggcatgca 2373
Query: 2448 agttcttggatgaaaattggaaccccaagttcacactgattgttgctcagaagaatcacc 2507
| || | ||||| || ||| || ||||||||| |||||||||||||||||||||| |
Sbjct: 2374 aatttctcgatgagaagtggtcaccaaagttcacagtgattgttgctcagaagaatcatc 2433
Query: 2508 acac-aaagtttttcatgcctggatctcctgacaatgtccctcctggcactgttgttgat 2566
| || ||| ||||||| | |||||||||| || ||||| || || || |||||||| ||
Sbjct: 2434 ataccaaattttttca-gtctggatctccagataatgttccgccaggtactgttgtggac 2492
Query: 2567 aatgctgtctgccatccaaggaattatgacttttacatgtgcgctcatgctggaatgatt 2626
|| || ||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 2493 aaacaagtgtgccatccaaggaattatgacttctacatgtgtgctcatgctggaatgatt 2552
Query: 2627 gggacaacaaggccaacacattaccatatcctgcatgatgagatacactttgccgcggat 2686
|| || || |||||||||||||| ||| | ||||| ||||||||| || || | |||
Sbjct: 2553 ggaacgacgaggccaacacattatcatgttctgcacgatgagataggtttctcccctgat 2612
Query: 2687 gacctgcaggatcttgtgcattcgctctcttatgtgtaccaaaggagcacaacagcaata 2746
|| |||||||| || ||||| || |||||||||||||| || || ||||||||||| |||
Sbjct: 2613 gatctgcaggagctagtgcactcactctcttatgtgtatcagagaagcacaacagccata 2672
Query: 2747 tcagttgtttctccaatctgctatgcacatcttgcagctgctcaggtgg 2795
||||||||| |||| || |||||||| |||||||| |||||||||||||
Sbjct: 2673 tcagttgttgctccgatttgctatgcccatcttgctgctgctcaggtgg 2721
Score = 297 bits (150), Expect = 1e-76
Identities = 517/638 (81%), Gaps = 6/638 (0%)
Strand = Plus / Plus
Query: 545 gactttgcctatgatggtgaaaagagtctttttaccattggcgcccttccacaaatcaac 604
|||||||||||||||||||||||||| || ||||| ||||| || ||||||||| | |
Sbjct: 466 gactttgcctatgatggtgaaaagagcctgtttacaattggtgctcttccacaagtaact 525
Query: 605 aatgagtttgttgtggttcttgaagacttttccactggaaagactcctgcaaatggcagc 664
|||||||| ||||| | || || |||| |||||||||||| |||| ||||| |||
Sbjct: 526 aatgagttcacagtggtgttggaggatgtttcaactggaaagactgctgccaatggaagc 585
Query: 665 cctgga---aatgacagtccagga---aatgacaagaagagagtgaaaaggccatatcag 718
|||||| |||||||| || ||| | ||||| ||||||||| | || ||||| |||
Sbjct: 586 cctggaggtaatgacagccctggaggtagtgacaggaagagagttaggagaccataccag 645
Query: 719 actaaaactttcaaggtggagttaagctttgcagctagaatccccatgagtgctattgca 778
|| || |||||||| |||||| | |||||||||| | ||||| |||| ||| |||||
Sbjct: 646 accaagactttcaaagtggagctgtgctttgcagcaaagatccctatgaatgcaattgct 705
Query: 779 atggcactaaaaggacaggaatcagagcacacgcaagaagccattcgggttattgatatc 838
||| ||||||| || ||||||||| || | |||||||| | | ||| |||||||
Sbjct: 706 caggccataaaaggtcaagaatcagagaactcccaagaagctctcagagttcttgatata 765
Query: 839 atattgaggcaacactctgccaaacagggctgcctgttagtccgtcagtcattttttcac 898
||||| ||||| |||||||| |||||||||||||| ||||| || ||||||||||| |||
Sbjct: 766 atattaaggcagcactctgctaaacagggctgccttttagtacgccagtcatttttccac 825
Query: 899 aacaatccttcaaactttgtggacttgggtggaggggtaatgggctgcagaggtttccac 958
||||||||| |||||||| ||| ||||||| || || |||||||| |||| |||||
Sbjct: 826 aacaatcctaataactttgttgacctgggtggtggtgtgatgggctgtcgaggattccat 885
Query: 959 tcaagctttcgagccacacagagtgggctttctctcaatattgatgtttctaccacaatg 1018
||||| || || | |||||||||||| |||||||| ||||| |||||||| || || |||
Sbjct: 886 tcaagtttccgtggcacacagagtggactttctctgaatatcgatgtttcgacaactatg 945
Query: 1019 attgtgaaacctggacctgttgttgattttctgctggccaaccagaaggttgaccaccct 1078
||||| |||||||| |||||| | |||||||| || ||||||||||| ||||| ||||||
Sbjct: 946 attgttaaacctggtcctgttatcgattttcttcttgccaaccagaaagttgatcaccct 1005
Query: 1079 aacaaaattgattggcctaaggccaagcgtgcactcaagaatttaaggataaaaacaagc 1138
||| ||||||||||| |||||||||||||| |||||||| || ||||||| ||| | |
Sbjct: 1006 gacagaattgattggcaaaaggccaagcgtgctctcaagaacttgaggataagaaccacc 1065
Query: 1139 ccagcaaatacagaatacaagattgttggtttgagtga 1176
|| | ||| |||||| |||||| |||||||||||||
Sbjct: 1066 cctgtgaattcagaattcaagatcattggtttgagtga 1103
Score = 60.0 bits (30), Expect = 5e-05
Identities = 114/142 (80%)
Strand = Plus / Plus
Query: 1511 cccatgctgagggcatgtggaatttcaatagctcaaggttttacacaggtggctggtagg 1570
|||||| ||||||||| ||| |||||||| || ||| |||||| || || | || |||
Sbjct: 1438 cccatgttgagggcatctggcatttcaattgcccaaaattttactcaagttgaaggaagg 1497
Query: 1571 gtactgcaggctcccaagctcaaagctggaaatggtgaagatattttcacaaggaatggg 1630
|| ||||| | || ||||| |||||||| |||||||||||||| ||| || | |||||
Sbjct: 1498 gtcctgcaacccccaaagctgaaagctggcaatggtgaagatatattcccacgcaatggt 1557
Query: 1631 cgttggaatttcaacaacaaga 1652
|| ||||| |||||||| ||||
Sbjct: 1558 cggtggaacttcaacaataaga 1579
Score = 56.0 bits (28), Expect = 8e-04
Identities = 61/72 (84%)
Strand = Plus / Plus
Query: 445 tctgaagtatgaagatgacaggcctgttgatggaaaaggtgttggtagaaaagtcattga 504
|||||||||||| ||||| | || |||||||| ||||| || ||| |||| || |||||
Sbjct: 366 tctgaagtatgaggatgatcgaccggttgatgggaaaggggtaggtcgaaaggtgattga 425
Query: 505 taaactgcagca 516
||||||||||||
Sbjct: 426 taaactgcagca 437
Score = 52.0 bits (26), Expect = 0.013
Identities = 125/158 (79%)
Strand = Plus / Plus
Query: 1313 ccttgtataaatgttgggaaacctaagcggccaacgtattttcccatcgagctctgccag 1372
||||| |||||||| |||||||| ||||| ||||| |||||||| || ||||| |||
Sbjct: 1240 ccttgcataaatgtggggaaaccaaagcgtccaacttattttccaatagagctatgctct 1299
Query: 1373 ctggtgcctttgcaaaggtacaccaaatctttgagtaccctacaaagatcatctcttgtt 1432
|| | || | ||||| ||||||||| ||||| || || ||||| || || ||||||
Sbjct: 1300 cttattccactacaaagatacaccaaagctttgtcaacactgcaaaggtcctcccttgtt 1359
Query: 1433 gagaagtccaggcagaagcctcaagagaggatgtcagt 1470
||||| ||||| |||||||| || || || ||||||||
Sbjct: 1360 gagaaatccagacagaagccccaggaaagaatgtcagt 1397
Score = 48.1 bits (24), Expect = 0.20
Identities = 111/140 (79%)
Strand = Plus / Plus
Query: 1841 gatatgtttgagcaagtgaagtctaaacttcctggggctcccaagtttctgttgtgtgtc 1900
||||||||||| || | || || ||||||||||| ||||| || || || ||||| |
Sbjct: 1768 gatatgtttgaacagataaaatcgaaacttcctggagctccgaaattcctcttgtgcctt 1827
Query: 1901 cttgccgagaggaagaactctgatgtttatggtccatggaagcgaaaatgccttgctgac 1960
||| | |||||||| || | ||| ||||||||||| |||||| | || || ||||||||
Sbjct: 1828 cttcctgagaggaaaaattgtgaagtttatggtccttggaagaggaagtgtcttgctgaa 1887
Query: 1961 tttgggattgtcactcaatg 1980
|| || |||||||| |||||
Sbjct: 1888 ttcggtattgtcacacaatg 1907
Score = 48.1 bits (24), Expect = 0.20
Identities = 51/60 (85%)
Strand = Plus / Plus
Query: 2873 ccggtgcaggagctgcctcgtctccatgagaaagtccgcagcagcatgttcttctgctga 2932
||||||| ||||||||||| |||||||||||||| | ||| |||||| |||||||||
Sbjct: 2796 ccggtgcctgagctgcctcgcctccatgagaaagtgaggagctccatgtttttctgctga 2855
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
Length = 43261740
Score = 147 bits (74), Expect = 3e-31
Identities = 95/102 (93%)
Strand = Plus / Minus
Query: 1098 aggccaagcgtgcactcaagaatttaaggataaaaacaagcccagcaaatacagaataca 1157
||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 9634745 aggccaagcgtgctctgaagaatttaaggataaaaacaagtccagcaaatactgaataca 9634686
Query: 1158 agattgttggtttgagtgataggaactgttatgaacaaatgt 1199
||||||||||||||||||| || ||||| |||||||||||||
Sbjct: 9634685 agattgttggtttgagtgagagaaactgctatgaacaaatgt 9634644
Score = 127 bits (64), Expect = 3e-25
Identities = 97/108 (89%)
Strand = Plus / Minus
Query: 1376 gtgcctttgcaaaggtacaccaaatctttgagtaccctacaaagatcatctcttgttgag 1435
||||||||||||||||| ||||| |||||||||| ||||| || || || |||||||||
Sbjct: 9634247 gtgcctttgcaaaggtataccaaggctttgagtacactacagaggtcttcgcttgttgag 9634188
Query: 1436 aagtccaggcagaagcctcaagagaggatgtcagttttgtctgatgtg 1483
|||||||||||||| ||| |||| ||||||||||||||||||||||||
Sbjct: 9634187 aagtccaggcagaaacctgaagaaaggatgtcagttttgtctgatgtg 9634140
Score = 107 bits (54), Expect = 3e-19
Identities = 153/186 (82%)
Strand = Plus / Minus
Query: 658 tggcagccctggaaatgacagtccaggaaatgacaagaagagagtgaaaaggccatatca 717
|||||||||||| |||||||||||||||||||||| ||| || || | ||||||||||||
Sbjct: 9635515 tggcagccctggcaatgacagtccaggaaatgacaggaaaagggttagaaggccatatca 9635456
Query: 718 gactaaaactttcaaggtggagttaagctttgcagctagaatccccatgagtgctattgc 777
||| |||||||| || || ||| | | ||||||||| | ||| || ||||| || |||||
Sbjct: 9635455 gacaaaaacttttaaagttgagctgaactttgcagcaaaaattcctatgagcgccattgc 9635396
Query: 778 aatggcactaaaaggacaggaatcagagcacacgcaagaagccattcgggttattgatat 837
||| | | ||| |||||||| || |||| |||||||| ||||| |||||||||||
Sbjct: 9635395 tcaggccttgagaggccaggaatctgaaaacacccaagaagcaattcgtgttattgatat 9635336
Query: 838 catatt 843
||||||
Sbjct: 9635335 catatt 9635330
Score = 99.6 bits (50), Expect = 6e-17
Identities = 113/134 (84%)
Strand = Plus / Minus
Query: 2045 cttggtggaatgaactcactgctacaaattgaaatgtccccaagtatacctcttgtatca 2104
|||||||| ||||||| ||||| |||||||||| ||||| || |||||||||||
Sbjct: 9633021 cttggtggcttgaactccctgcttcaaattgaaacatccccttccattcctcttgtatcc 9632962
Query: 2105 aaggtcccaactctcatcttgggaatggatgtgtcccatggatcccctggacagtctgat 2164
|||||||| || | || |||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 9632961 aaggtcccgacaataatattgggaatggatgtttcccatggatcacctggacagtctgat 9632902
Query: 2165 ataccatccattgc 2178
||||| || |||||
Sbjct: 9632901 ataccttcaattgc 9632888
Score = 99.6 bits (50), Expect = 6e-17
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 890 ttttttcacaacaatccttcaaactttgtggacttgggtggaggggtaatgggctgcaga 949
||||| || |||||||||||||| ||||| ||||||||||| || || |||||||| ||
Sbjct: 9635165 tttttccataacaatccttcaaattttgttgacttgggtggtggtgtgatgggctgtagg 9635106
Query: 950 ggtttccactcaagctttcgagccacacagagtgggctttctctcaatat 999
|| ||||| |||||||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 9635105 ggattccattcaagcttccgagctacacagagtggactttcactcaatat 9635056
Score = 91.7 bits (46), Expect = 1e-14
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 1016 atgattgtgaaacctggacctgttgttgattttctgctggccaaccagaaggttgaccac 1075
||||||||||||||||| ||||| || |||||||| || ||||||||||||||||| |||
Sbjct: 9634935 atgattgtgaaacctggtcctgtggtagattttctacttgccaaccagaaggttgatcac 9634876
Query: 1076 cctaacaaaattga 1089
|| |||||||||||
Sbjct: 9634875 ccaaacaaaattga 9634862
Score = 85.7 bits (43), Expect = 9e-13
Identities = 123/149 (82%), Gaps = 3/149 (2%)
Strand = Plus / Minus
Query: 1208 aagcaaaggaatggtgggaatggtgaacctgaagcaatagaaatatctgtgtatgattac 1267
|||||||| ||||||| ||||||||||||||| | ||| ||||||| || || |||
Sbjct: 9634495 aagcaaagaaatggtg---atggtgaacctgaaggtgtggaagtatctgtttacgagtac 9634439
Query: 1268 tttgtgaagaaccgtgggattgagcttaggtactctggtgatttcccttgtataaatgtt 1327
||||||||||| || || || ||| | || |||||||||||||| || ||||| |||||
Sbjct: 9634438 tttgtgaagaatcggggcatagagttgagatactctggtgattttccctgtatcaatgtg 9634379
Query: 1328 gggaaacctaagcggccaacgtattttcc 1356
|||||||| || |||||||| ||||||||
Sbjct: 9634378 gggaaaccaaaacggccaacttattttcc 9634350
Score = 79.8 bits (40), Expect = 6e-11
Identities = 138/170 (81%), Gaps = 3/170 (1%)
Strand = Plus / Minus
Query: 2765 tgctatgcacatcttgcagctgctcaggtggcgcagttcataaagtttgatgagatgtcc 2824
||||| || ||||| || ||||||||||| |||||||| ||||| || ||||||||
Sbjct: 9630670 tgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttcgacgagatgtcg 9630611
Query: 2825 gagacgtcgtcgagccagggtggtggccacacctctactgccagcggcccggtgcaggag 2884
||||||||||||||||| ||||||||| ||||| | | ||||| ||||||| |||
Sbjct: 9630610 gagacgtcgtcgagcca---tggtggccatacctcggcgggcagcgctccggtgcccgag 9630554
Query: 2885 ctgcctcgtctccatgagaaagtccgcagcagcatgttcttctgctgagc 2934
|||||||| || ||| | |||||| | ||| ||||||||||||||||||
Sbjct: 9630553 ctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctgagc 9630504
Score = 77.8 bits (39), Expect = 2e-10
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1937 tggaagcgaaaatgccttgctgactttgggattgtcactcaatgtgtggccccaacaagg 1996
|||||||| ||||| |||||||| ||||||||| | || |||||||||||||| || |||
Sbjct: 9633222 tggaagcggaaatgtcttgctgaatttgggattattacacaatgtgtggcccctactagg 9633163
Query: 1997 gtcaatgaccaatatctgacaaatgttttgctgaagatcaatgcaaa 2043
|||||||| || ||| | |||||||| || | ||||| ||||||||
Sbjct: 9633162 gtcaatgatcagtatattacaaatgtactgttaaagataaatgcaaa 9633116
Score = 75.8 bits (38), Expect = 9e-10
Identities = 137/170 (80%)
Strand = Plus / Minus
Query: 443 aatctgaagtatgaagatgacaggcctgttgatggaaaaggtgttggtagaaaagtcatt 502
|||||||||||||| ||||| || || || |||||||| || | |||||||| || |
Sbjct: 9635827 aatctgaagtatgaggatgatagaccagtggatggaaagggcataggtagaaaggtgctg 9635768
Query: 503 gataaactgcagcagacttatgcatctgatctagctcataaagactttgcctatgatggt 562
|| ||||| |||||||| ||||| ||||| || || ||||||| ||||| || ||||||
Sbjct: 9635767 gacaaactccagcagacctatgcgtctgagctggcaaataaagattttgcatacgatggt 9635708
Query: 563 gaaaagagtctttttaccattggcgcccttccacaaatcaacaatgagtt 612
|| ||||| || || |||||||| || ||||| ||| | |||||||||||
Sbjct: 9635707 gagaagagcctgttcaccattggtgctcttcctcaagtgaacaatgagtt 9635658
Score = 71.9 bits (36), Expect = 1e-08
Identities = 98/118 (83%), Gaps = 3/118 (2%)
Strand = Plus / Minus
Query: 2190 gttctcgagaatggccccttgtctcgaaatatagggcttcagtgcgctcgcagtcaccaa 2249
||||||| |||||||| ||||| || ||||| ||||||||||| || || |||||||| |
Sbjct: 9632519 gttctcgtgaatggcctcttgtatcaaaatacagggcttcagtccgttctcagtcaccta 9632460
Query: 2250 agctagaaatgatagattcattgttcaagccacaaggaact---gaagatgatggcct 2304
|| |||||||||| ||| | | || |||||||||||| || ||||||||||||||
Sbjct: 9632459 agttagaaatgattgatggactatttaagccacaaggagctcaggaagatgatggcct 9632402
Score = 71.9 bits (36), Expect = 1e-08
Identities = 90/108 (83%)
Strand = Plus / Minus
Query: 1481 gtgctgaagcgcagcagctatgatacagaacccatgctgagggcatgtggaatttcaata 1540
|||||||| ||||||| ||||||| |||| || ||| ||| | ||||| ||||||||
Sbjct: 9634060 gtgctgaaacgcagcaactatgattcagagcctatgttgaattcttgtggtatttcaatt 9634001
Query: 1541 gctcaaggttttacacaggtggctggtagggtactgcaggctcccaag 1588
|||| |||||||||||| || ||||| ||||| |||||||| ||||||
Sbjct: 9634000 gctcgaggttttacacaagttgctggcagggtgctgcaggcccccaag 9633953
Score = 58.0 bits (29), Expect = 2e-04
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 2555 actgttgttgataatgctgtctgccatccaaggaattatgacttttacatgtgcgctcat 2614
|||||||| || || || ||||| ||||||||||| ||||||| |||||||| || ||
Sbjct: 9631640 actgttgtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcac 9631581
Query: 2615 gctggaatgattg 2627
|||||||||||||
Sbjct: 9631580 gctggaatgattg 9631568
Score = 58.0 bits (29), Expect = 2e-04
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 2474 aagttcacactgattgttgctcagaagaatcaccacacaaagtttttcatgcctggatct 2533
||||| |||||||||||||| ||||||||||| || || || ||||| |||||||||||
Sbjct: 9631810 aagtttacactgattgttgcacagaagaatcatcataccaaattttttgtgcctggatct 9631751
Query: 2534 c 2534
|
Sbjct: 9631750 c 9631750
Score = 54.0 bits (27), Expect = 0.003
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 2633 acaaggccaacacattaccatatcctgcatgatgagata 2671
|||||||| |||||||| |||||||| ||||||||||||
Sbjct: 9630982 acaaggcctacacattatcatatccttcatgatgagata 9630944
Score = 54.0 bits (27), Expect = 0.003
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 2375 agggatggtgttagcgagagccagtttaatcaggtgctgaacatcgaattagatcaaatt 2434
|||||||| || || ||||||||||||| |||||||||||||| || | ||||||||
Sbjct: 9632032 agggatggggtcagtgagagccagtttacccaggtgctgaacattgagctggatcaaata 9631973
Query: 2435 attgagg 2441
|||||||
Sbjct: 9631972 attgagg 9631966
Score = 50.1 bits (25), Expect = 0.051
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 2394 gccagtttaatcaggtgctgaacat 2418
|||||||||||||||||||||||||
Sbjct: 9614546 gccagtttaatcaggtgctgaacat 9614522
Score = 48.1 bits (24), Expect = 0.20
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 1883 aagtttctgttgtgtgtccttgccgagaggaagaactctgatgtttatggtc 1934
||||||||| | ||||| ||||| ||||||||||| || ||| |||||||||
Sbjct: 9633354 aagtttctgctctgtgttcttgctgagaggaagaattcagatatttatggtc 9633303
Score = 48.1 bits (24), Expect = 0.20
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 1587 agctcaaagctggaaatggtgaagatattttcacaaggaatgggcgttggaa 1638
|||| ||||||||||||||||||||| |||| || | |||||||| |||||
Sbjct: 9633855 agctaaaagctggaaatggtgaagatctttttgcacgtaatgggcggtggaa 9633804
Score = 46.1 bits (23), Expect = 0.79
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 2627 gggacaacaaggccaacacattaccatatcctgcatgatgaga 2669
||||| |||||||| || ||||||||| | |||||||||||||
Sbjct: 9613174 gggactacaaggccgacgcattaccatgtgctgcatgatgaga 9613132
Score = 44.1 bits (22), Expect = 3.1
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 2574 tctgccatccaaggaattatgacttttacatgtgcgctcatgctggaatgattg 2627
|||| ||||| ||||| | ||| || |||||||| ||||||||||| |||||||
Sbjct: 9614108 tctgtcatcccaggaactgtgatttctacatgtgtgctcatgctgggatgattg 9614055
>dbj|AP000836.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
clone:P0038F12
Length = 190014
Score = 147 bits (74), Expect = 3e-31
Identities = 95/102 (93%)
Strand = Plus / Minus
Query: 1098 aggccaagcgtgcactcaagaatttaaggataaaaacaagcccagcaaatacagaataca 1157
||||||||||||| || ||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 72748 aggccaagcgtgctctgaagaatttaaggataaaaacaagtccagcaaatactgaataca 72689
Query: 1158 agattgttggtttgagtgataggaactgttatgaacaaatgt 1199
||||||||||||||||||| || ||||| |||||||||||||
Sbjct: 72688 agattgttggtttgagtgagagaaactgctatgaacaaatgt 72647
Score = 127 bits (64), Expect = 3e-25
Identities = 97/108 (89%)
Strand = Plus / Minus
Query: 1376 gtgcctttgcaaaggtacaccaaatctttgagtaccctacaaagatcatctcttgttgag 1435
||||||||||||||||| ||||| |||||||||| ||||| || || || |||||||||
Sbjct: 72250 gtgcctttgcaaaggtataccaaggctttgagtacactacagaggtcttcgcttgttgag 72191
Query: 1436 aagtccaggcagaagcctcaagagaggatgtcagttttgtctgatgtg 1483
|||||||||||||| ||| |||| ||||||||||||||||||||||||
Sbjct: 72190 aagtccaggcagaaacctgaagaaaggatgtcagttttgtctgatgtg 72143
Score = 107 bits (54), Expect = 3e-19
Identities = 153/186 (82%)
Strand = Plus / Minus
Query: 658 tggcagccctggaaatgacagtccaggaaatgacaagaagagagtgaaaaggccatatca 717
|||||||||||| |||||||||||||||||||||| ||| || || | ||||||||||||
Sbjct: 73518 tggcagccctggcaatgacagtccaggaaatgacaggaaaagggttagaaggccatatca 73459
Query: 718 gactaaaactttcaaggtggagttaagctttgcagctagaatccccatgagtgctattgc 777
||| |||||||| || || ||| | | ||||||||| | ||| || ||||| || |||||
Sbjct: 73458 gacaaaaacttttaaagttgagctgaactttgcagcaaaaattcctatgagcgccattgc 73399
Query: 778 aatggcactaaaaggacaggaatcagagcacacgcaagaagccattcgggttattgatat 837
||| | | ||| |||||||| || |||| |||||||| ||||| |||||||||||
Sbjct: 73398 tcaggccttgagaggccaggaatctgaaaacacccaagaagcaattcgtgttattgatat 73339
Query: 838 catatt 843
||||||
Sbjct: 73338 catatt 73333
Score = 99.6 bits (50), Expect = 6e-17
Identities = 113/134 (84%)
Strand = Plus / Minus
Query: 2045 cttggtggaatgaactcactgctacaaattgaaatgtccccaagtatacctcttgtatca 2104
|||||||| ||||||| ||||| |||||||||| ||||| || |||||||||||
Sbjct: 71024 cttggtggcttgaactccctgcttcaaattgaaacatccccttccattcctcttgtatcc 70965
Query: 2105 aaggtcccaactctcatcttgggaatggatgtgtcccatggatcccctggacagtctgat 2164
|||||||| || | || |||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 70964 aaggtcccgacaataatattgggaatggatgtttcccatggatcacctggacagtctgat 70905
Query: 2165 ataccatccattgc 2178
||||| || |||||
Sbjct: 70904 ataccttcaattgc 70891
Score = 99.6 bits (50), Expect = 6e-17
Identities = 95/110 (86%)
Strand = Plus / Minus
Query: 890 ttttttcacaacaatccttcaaactttgtggacttgggtggaggggtaatgggctgcaga 949
||||| || |||||||||||||| ||||| ||||||||||| || || |||||||| ||
Sbjct: 73168 tttttccataacaatccttcaaattttgttgacttgggtggtggtgtgatgggctgtagg 73109
Query: 950 ggtttccactcaagctttcgagccacacagagtgggctttctctcaatat 999
|| ||||| |||||||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 73108 ggattccattcaagcttccgagctacacagagtggactttcactcaatat 73059
Score = 91.7 bits (46), Expect = 1e-14
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 1016 atgattgtgaaacctggacctgttgttgattttctgctggccaaccagaaggttgaccac 1075
||||||||||||||||| ||||| || |||||||| || ||||||||||||||||| |||
Sbjct: 72938 atgattgtgaaacctggtcctgtggtagattttctacttgccaaccagaaggttgatcac 72879
Query: 1076 cctaacaaaattga 1089
|| |||||||||||
Sbjct: 72878 ccaaacaaaattga 72865
Score = 85.7 bits (43), Expect = 9e-13
Identities = 123/149 (82%), Gaps = 3/149 (2%)
Strand = Plus / Minus
Query: 1208 aagcaaaggaatggtgggaatggtgaacctgaagcaatagaaatatctgtgtatgattac 1267
|||||||| ||||||| ||||||||||||||| | ||| ||||||| || || |||
Sbjct: 72498 aagcaaagaaatggtg---atggtgaacctgaaggtgtggaagtatctgtttacgagtac 72442
Query: 1268 tttgtgaagaaccgtgggattgagcttaggtactctggtgatttcccttgtataaatgtt 1327
||||||||||| || || || ||| | || |||||||||||||| || ||||| |||||
Sbjct: 72441 tttgtgaagaatcggggcatagagttgagatactctggtgattttccctgtatcaatgtg 72382
Query: 1328 gggaaacctaagcggccaacgtattttcc 1356
|||||||| || |||||||| ||||||||
Sbjct: 72381 gggaaaccaaaacggccaacttattttcc 72353
Score = 79.8 bits (40), Expect = 6e-11
Identities = 138/170 (81%), Gaps = 3/170 (1%)
Strand = Plus / Minus
Query: 2765 tgctatgcacatcttgcagctgctcaggtggcgcagttcataaagtttgatgagatgtcc 2824
||||| || ||||| || ||||||||||| |||||||| ||||| || ||||||||
Sbjct: 68673 tgctacgcgcatctcgctgctgctcaggtcagccagttcatcaagttcgacgagatgtcg 68614
Query: 2825 gagacgtcgtcgagccagggtggtggccacacctctactgccagcggcccggtgcaggag 2884
||||||||||||||||| ||||||||| ||||| | | ||||| ||||||| |||
Sbjct: 68613 gagacgtcgtcgagcca---tggtggccatacctcggcgggcagcgctccggtgcccgag 68557
Query: 2885 ctgcctcgtctccatgagaaagtccgcagcagcatgttcttctgctgagc 2934
|||||||| || ||| | |||||| | ||| ||||||||||||||||||
Sbjct: 68556 ctgcctcgcctgcataacaaagtcaggagctccatgttcttctgctgagc 68507
Score = 77.8 bits (39), Expect = 2e-10
Identities = 90/107 (84%)
Strand = Plus / Minus
Query: 1937 tggaagcgaaaatgccttgctgactttgggattgtcactcaatgtgtggccccaacaagg 1996
|||||||| ||||| |||||||| ||||||||| | || |||||||||||||| || |||
Sbjct: 71225 tggaagcggaaatgtcttgctgaatttgggattattacacaatgtgtggcccctactagg 71166
Query: 1997 gtcaatgaccaatatctgacaaatgttttgctgaagatcaatgcaaa 2043
|||||||| || ||| | |||||||| || | ||||| ||||||||
Sbjct: 71165 gtcaatgatcagtatattacaaatgtactgttaaagataaatgcaaa 71119
Score = 75.8 bits (38), Expect = 9e-10
Identities = 137/170 (80%)
Strand = Plus / Minus
Query: 443 aatctgaagtatgaagatgacaggcctgttgatggaaaaggtgttggtagaaaagtcatt 502
|||||||||||||| ||||| || || || |||||||| || | |||||||| || |
Sbjct: 73830 aatctgaagtatgaggatgatagaccagtggatggaaagggcataggtagaaaggtgctg 73771
Query: 503 gataaactgcagcagacttatgcatctgatctagctcataaagactttgcctatgatggt 562
|| ||||| |||||||| ||||| ||||| || || ||||||| ||||| || ||||||
Sbjct: 73770 gacaaactccagcagacctatgcgtctgagctggcaaataaagattttgcatacgatggt 73711
Query: 563 gaaaagagtctttttaccattggcgcccttccacaaatcaacaatgagtt 612
|| ||||| || || |||||||| || ||||| ||| | |||||||||||
Sbjct: 73710 gagaagagcctgttcaccattggtgctcttcctcaagtgaacaatgagtt 73661
Score = 71.9 bits (36), Expect = 1e-08
Identities = 98/118 (83%), Gaps = 3/118 (2%)
Strand = Plus / Minus
Query: 2190 gttctcgagaatggccccttgtctcgaaatatagggcttcagtgcgctcgcagtcaccaa 2249
||||||| |||||||| ||||| || ||||| ||||||||||| || || |||||||| |
Sbjct: 70522 gttctcgtgaatggcctcttgtatcaaaatacagggcttcagtccgttctcagtcaccta 70463
Query: 2250 agctagaaatgatagattcattgttcaagccacaaggaact---gaagatgatggcct 2304
|| |||||||||| ||| | | || |||||||||||| || ||||||||||||||
Sbjct: 70462 agttagaaatgattgatggactatttaagccacaaggagctcaggaagatgatggcct 70405
Score = 71.9 bits (36), Expect = 1e-08
Identities = 90/108 (83%)
Strand = Plus / Minus
Query: 1481 gtgctgaagcgcagcagctatgatacagaacccatgctgagggcatgtggaatttcaata 1540
|||||||| ||||||| ||||||| |||| || ||| ||| | ||||| ||||||||
Sbjct: 72063 gtgctgaaacgcagcaactatgattcagagcctatgttgaattcttgtggtatttcaatt 72004
Query: 1541 gctcaaggttttacacaggtggctggtagggtactgcaggctcccaag 1588
|||| |||||||||||| || ||||| ||||| |||||||| ||||||
Sbjct: 72003 gctcgaggttttacacaagttgctggcagggtgctgcaggcccccaag 71956
Score = 58.0 bits (29), Expect = 2e-04
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 2555 actgttgttgataatgctgtctgccatccaaggaattatgacttttacatgtgcgctcat 2614
|||||||| || || || ||||| ||||||||||| ||||||| |||||||| || ||
Sbjct: 69643 actgttgtggacaacgcagtctgtcatccaaggaacaatgacttctacatgtgtgcgcac 69584
Query: 2615 gctggaatgattg 2627
|||||||||||||
Sbjct: 69583 gctggaatgattg 69571
Score = 58.0 bits (29), Expect = 2e-04
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 2474 aagttcacactgattgttgctcagaagaatcaccacacaaagtttttcatgcctggatct 2533
||||| |||||||||||||| ||||||||||| || || || ||||| |||||||||||
Sbjct: 69813 aagtttacactgattgttgcacagaagaatcatcataccaaattttttgtgcctggatct 69754
Query: 2534 c 2534
|
Sbjct: 69753 c 69753
Score = 54.0 bits (27), Expect = 0.003
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 2633 acaaggccaacacattaccatatcctgcatgatgagata 2671
|||||||| |||||||| |||||||| ||||||||||||
Sbjct: 68985 acaaggcctacacattatcatatccttcatgatgagata 68947
Score = 54.0 bits (27), Expect = 0.003
Identities = 57/67 (85%)
Strand = Plus / Minus
Query: 2375 agggatggtgttagcgagagccagtttaatcaggtgctgaacatcgaattagatcaaatt 2434
|||||||| || || ||||||||||||| |||||||||||||| || | ||||||||
Sbjct: 70035 agggatggggtcagtgagagccagtttacccaggtgctgaacattgagctggatcaaata 69976
Query: 2435 attgagg 2441
|||||||
Sbjct: 69975 attgagg 69969
Score = 50.1 bits (25), Expect = 0.051
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 2394 gccagtttaatcaggtgctgaacat 2418
|||||||||||||||||||||||||
Sbjct: 52549 gccagtttaatcaggtgctgaacat 52525
Score = 48.1 bits (24), Expect = 0.20
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 1883 aagtttctgttgtgtgtccttgccgagaggaagaactctgatgtttatggtc 1934
||||||||| | ||||| ||||| ||||||||||| || ||| |||||||||
Sbjct: 71357 aagtttctgctctgtgttcttgctgagaggaagaattcagatatttatggtc 71306
Score = 48.1 bits (24), Expect = 0.20
Identities = 45/52 (86%)
Strand = Plus / Minus
Query: 1587 agctcaaagctggaaatggtgaagatattttcacaaggaatgggcgttggaa 1638
|||| ||||||||||||||||||||| |||| || | |||||||| |||||
Sbjct: 71858 agctaaaagctggaaatggtgaagatctttttgcacgtaatgggcggtggaa 71807
Score = 46.1 bits (23), Expect = 0.79
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 2627 gggacaacaaggccaacacattaccatatcctgcatgatgaga 2669
||||| |||||||| || ||||||||| | |||||||||||||
Sbjct: 51177 gggactacaaggccgacgcattaccatgtgctgcatgatgaga 51135
Score = 44.1 bits (22), Expect = 3.1
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 2574 tctgccatccaaggaattatgacttttacatgtgcgctcatgctggaatgattg 2627
|||| ||||| ||||| | ||| || |||||||| ||||||||||| |||||||
Sbjct: 52111 tctgtcatcccaggaactgtgatttctacatgtgtgctcatgctgggatgattg 52058
>ref|NM_001049256.1 | Oryza sativa (japonica cultivar-group) Os01g0275200 (Os01g0275200)
mRNA, complete cds
Length = 6732
Score = 107 bits (54), Expect = 3e-19
Identities = 215/266 (80%), Gaps = 2/266 (0%)
Strand = Plus / Plus
Query: 2539 caatgtccctcctggcactgttgttgataatgctgtctgccatccaaggaattatgactt 2598
|||||| |||||||| ||||||||||| || | |||| ||||| ||||| | ||| ||
Sbjct: 6351 caatgttcctcctggtactgttgttgacaaaggaatctgtcatcccaggaactgtgattt 6410
Query: 2599 ttacatgtgcgctcatgctggaatgattgggacaacaaggccaacacattaccatatcct 2658
|||||||| ||||||||||| ||||||||||| |||||||| || ||||||||| | ||
Sbjct: 6411 ctacatgtgtgctcatgctgggatgattgggactacaaggccgacgcattaccatgtgct 6470
Query: 2659 gcatgatgagatacacttt-gccgcggatgacctgcaggatcttgtgcattcgctctctt 2717
||||||||||| ||| ||| || | |||||| ||||||| |||||||| ||||| |
Sbjct: 6471 gcatgatgaga-acaatttcacccctgatgacttgcaggagcttgtgcacaacctctcat 6529
Query: 2718 atgtgtaccaaaggagcacaacagcaatatcagttgtttctccaatctgctatgcacatc 2777
| |||||||| |||||||| || || || |||| ||| |||| |||||||| || || |
Sbjct: 6530 acgtgtaccagaggagcacgacggccatctcaggtgtcgctccgatctgctacgcgcacc 6589
Query: 2778 ttgcagctgctcaggtggcgcagttc 2803
| || || || |||||| ||||||||
Sbjct: 6590 tggcggcggcgcaggtgtcgcagttc 6615
Score = 56.0 bits (28), Expect = 8e-04
Identities = 85/104 (81%)
Strand = Plus / Plus
Query: 1514 atgctgagggcatgtggaatttcaatagctcaaggttttacacaggtggctggtagggta 1573
|||||||||| ||||| ||||| |||||||||| ||||| ||||| |||| ||| ||
Sbjct: 5545 atgctgagggagtgtggcatttctatagctcaagaatttacccaggttgctgctagagtc 5604
Query: 1574 ctgcaggctcccaagctcaaagctggaaatggtgaagatatttt 1617
|| | ||| || ||||| ||| ||||| |||| |||||||||||
Sbjct: 5605 cttccggcaccaaagctgaaatctggagatggcgaagatatttt 5648
Score = 54.0 bits (27), Expect = 0.003
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 1320 taaatgttgggaaacctaagcggccaacgtattttcccatcgagctctgccagctggtgc 1379
||||||||||||| || ||||||||||| ||| | || | ||||| ||||| ||||||
Sbjct: 5351 taaatgttgggaagccaaagcggccaacatatatcccattggagctttgccatttggtgc 5410
Query: 1380 ctttgcaaaggtaca 1394
| |||||||||||||
Sbjct: 5411 cattgcaaaggtaca 5425
Score = 50.1 bits (25), Expect = 0.051
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 2394 gccagtttaatcaggtgctgaacat 2418
|||||||||||||||||||||||||
Sbjct: 6182 gccagtttaatcaggtgctgaacat 6206
Score = 44.1 bits (22), Expect = 3.1
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 1442 aggcagaagcctcaagagaggatgtcagttttgtctgatgtg 1483
|||||||| |||||||||||||||| || ||||||| ||||
Sbjct: 5473 aggcagaatcctcaagagaggatgtttgtcttgtctggtgtg 5514
>emb|CR855037.1 | Oryza sativa genomic DNA, chromosome 4, BAC clone: H0820C10, complete
sequence
Length = 114139
Score = 93.7 bits (47), Expect = 4e-15
Identities = 113/135 (83%)
Strand = Plus / Minus
Query: 865 gggctgcctgttagtccgtcagtcattttttcacaacaatccttcaaactttgtggactt 924
||||||||| ||||| || ||||||||||| |||||||||||| |||||||| ||| |
Sbjct: 71953 gggctgccttttagtacgccagtcatttttccacaacaatcctaataactttgttgacct 71894
Query: 925 gggtggaggggtaatgggctgcagaggtttccactcaagctttcgagccacacagagtgg 984
|||||| || || |||||||| |||| ||||| ||||| || || | ||||||||||||
Sbjct: 71893 gggtggtggtgtgatgggctgtcgaggattccattcaagtttccgtggcacacagagtgg 71834
Query: 985 gctttctctcaatat 999
|||||||| |||||
Sbjct: 71833 actttctctgaatat 71819
Score = 87.7 bits (44), Expect = 2e-13
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 2576 tgccatccaaggaattatgacttttacatgtgcgctcatgctggaatgattg 2627
||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 68552 tgccatccaaggaattatgacttctacatgtgtgctcatgctggaatgattg 68501
Score = 83.8 bits (42), Expect = 4e-12
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1001 gatgtttctaccacaatgattgtgaaacctggacctgttgttgattttctgctggccaac 1060
|||||||| || || |||||||| |||||||| |||||| | |||||||| || ||||||
Sbjct: 71673 gatgtttcgacaactatgattgttaaacctggtcctgttatcgattttcttcttgccaac 71614
Query: 1061 cagaaggttgaccaccctaacaaaattgattggc 1094
||||| ||||| |||||| ||| |||||||||||
Sbjct: 71613 cagaaagttgatcaccctgacagaattgattggc 71580
Score = 73.8 bits (37), Expect = 4e-09
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 2240 cagtcaccaaagctagaaatgatagattcattgttcaagccacaaggaactgaagatgat 2299
|||||||| |||||||||||||| ||| ||||| ||||||| ||||||||||||||||
Sbjct: 69455 cagtcacctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaagatgat 69396
Query: 2300 ggcct 2304
|||||
Sbjct: 69395 ggcct 69391
Score = 67.9 bits (34), Expect = 2e-07
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 545 gactttgcctatgatggtgaaaagagtctttttaccattggcgcccttccacaa 598
|||||||||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 72510 gactttgcctatgatggtgaaaagagcctgtttacaattggtgctcttccacaa 72457
Score = 56.0 bits (28), Expect = 8e-04
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 2474 aagttcacactgattgttgctcagaagaatca 2505
||||||||| ||||||||||||||||||||||
Sbjct: 68754 aagttcacagtgattgttgctcagaagaatca 68723
Score = 56.0 bits (28), Expect = 8e-04
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 445 tctgaagtatgaagatgacaggcctgttgatggaaaaggtgttggtagaaaagtcattga 504
|||||||||||| ||||| | || |||||||| ||||| || ||| |||| || |||||
Sbjct: 72610 tctgaagtatgaggatgatcgaccggttgatgggaaaggggtaggtcgaaaggtgattga 72551
Query: 505 taaactgcagca 516
||||||||||||
Sbjct: 72550 taaactgcagca 72539
Score = 54.0 bits (27), Expect = 0.003
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 1098 aggccaagcgtgcactcaagaatttaaggataaaaacaagcccagcaaatacagaataca 1157
||||||||||||| |||||||| || ||||||| ||| | ||| | ||| |||||| ||
Sbjct: 71480 aggccaagcgtgctctcaagaacttgaggataagaaccacccctgtgaattcagaattca 71421
Query: 1158 agattgttggtttgagtga 1176
|||| |||||||||||||
Sbjct: 71420 agatcattggtttgagtga 71402
Score = 50.1 bits (25), Expect = 0.051
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1587 agctcaaagctggaaatggtgaagatattttcacaaggaatgggcgttggaatttcaaca 1646
|||| |||||||| |||||||||||||| ||| || | ||||| || ||||| |||||||
Sbjct: 70548 agctgaaagctggcaatggtgaagatatattcccacgcaatggtcggtggaacttcaaca 70489
Query: 1647 a 1647
|
Sbjct: 70488 a 70488
Score = 48.1 bits (24), Expect = 0.20
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 2873 ccggtgcaggagctgcctcgtctccatgagaaagtccgcagcagcatgttcttctgctga 2932
||||||| ||||||||||| |||||||||||||| | ||| |||||| |||||||||
Sbjct: 67979 ccggtgcctgagctgcctcgcctccatgagaaagtgaggagctccatgtttttctgctga 67920
Score = 46.1 bits (23), Expect = 0.79
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 2765 tgctatgcacatcttgcagctgctcaggtgg 2795
|||||||| |||||||| |||||||||||||
Sbjct: 68084 tgctatgcccatcttgctgctgctcaggtgg 68054
Score = 44.1 bits (22), Expect = 3.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2321 attgacttctacaccagttctggaaa 2346
|||||||||||||| |||||||||||
Sbjct: 69272 attgacttctacactagttctggaaa 69247
Score = 44.1 bits (22), Expect = 3.1
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 1385 caaaggtacaccaaatctttgagtaccctacaaagatcatctcttgttgagaagtccagg 1444
||||| ||||||||| ||||| || || ||||| || || ||||||||||| |||||
Sbjct: 70942 caaagatacaccaaagctttgtcaacactgcaaaggtcctcccttgttgagaaatccaga 70883
Query: 1445 cagaagcctcaagagaggatgtcagt 1470
|||||||| || || || ||||||||
Sbjct: 70882 cagaagccccaggaaagaatgtcagt 70857
>dbj|AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
Length = 35498469
Score = 93.7 bits (47), Expect = 4e-15
Identities = 113/135 (83%)
Strand = Plus / Minus
Query: 865 gggctgcctgttagtccgtcagtcattttttcacaacaatccttcaaactttgtggactt 924
||||||||| ||||| || ||||||||||| |||||||||||| |||||||| ||| |
Sbjct: 3536514 gggctgccttttagtacgccagtcatttttccacaacaatcctaataactttgttgacct 3536455
Query: 925 gggtggaggggtaatgggctgcagaggtttccactcaagctttcgagccacacagagtgg 984
|||||| || || |||||||| |||| ||||| ||||| || || | ||||||||||||
Sbjct: 3536454 gggtggtggtgtgatgggctgtcgaggattccattcaagtttccgtggcacacagagtgg 3536395
Query: 985 gctttctctcaatat 999
|||||||| |||||
Sbjct: 3536394 actttctctgaatat 3536380
Score = 87.7 bits (44), Expect = 2e-13
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 2576 tgccatccaaggaattatgacttttacatgtgcgctcatgctggaatgattg 2627
||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 3533113 tgccatccaaggaattatgacttctacatgtgtgctcatgctggaatgattg 3533062
Score = 83.8 bits (42), Expect = 4e-12
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1001 gatgtttctaccacaatgattgtgaaacctggacctgttgttgattttctgctggccaac 1060
|||||||| || || |||||||| |||||||| |||||| | |||||||| || ||||||
Sbjct: 3536234 gatgtttcgacaactatgattgttaaacctggtcctgttatcgattttcttcttgccaac 3536175
Query: 1061 cagaaggttgaccaccctaacaaaattgattggc 1094
||||| ||||| |||||| ||| |||||||||||
Sbjct: 3536174 cagaaagttgatcaccctgacagaattgattggc 3536141
Score = 73.8 bits (37), Expect = 4e-09
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 2240 cagtcaccaaagctagaaatgatagattcattgttcaagccacaaggaactgaagatgat 2299
|||||||| |||||||||||||| ||| ||||| ||||||| ||||||||||||||||
Sbjct: 3534016 cagtcacctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaagatgat 3533957
Query: 2300 ggcct 2304
|||||
Sbjct: 3533956 ggcct 3533952
Score = 67.9 bits (34), Expect = 2e-07
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 545 gactttgcctatgatggtgaaaagagtctttttaccattggcgcccttccacaa 598
|||||||||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 3537071 gactttgcctatgatggtgaaaagagcctgtttacaattggtgctcttccacaa 3537018
Score = 56.0 bits (28), Expect = 8e-04
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 2474 aagttcacactgattgttgctcagaagaatca 2505
||||||||| ||||||||||||||||||||||
Sbjct: 3533315 aagttcacagtgattgttgctcagaagaatca 3533284
Score = 56.0 bits (28), Expect = 8e-04
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 445 tctgaagtatgaagatgacaggcctgttgatggaaaaggtgttggtagaaaagtcattga 504
|||||||||||| ||||| | || |||||||| ||||| || ||| |||| || |||||
Sbjct: 3537171 tctgaagtatgaggatgatcgaccggttgatgggaaaggggtaggtcgaaaggtgattga 3537112
Query: 505 taaactgcagca 516
||||||||||||
Sbjct: 3537111 taaactgcagca 3537100
Score = 54.0 bits (27), Expect = 0.003
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 1098 aggccaagcgtgcactcaagaatttaaggataaaaacaagcccagcaaatacagaataca 1157
||||||||||||| |||||||| || ||||||| ||| | ||| | ||| |||||| ||
Sbjct: 3536041 aggccaagcgtgctctcaagaacttgaggataagaaccacccctgtgaattcagaattca 3535982
Query: 1158 agattgttggtttgagtga 1176
|||| |||||||||||||
Sbjct: 3535981 agatcattggtttgagtga 3535963
Score = 50.1 bits (25), Expect = 0.051
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1587 agctcaaagctggaaatggtgaagatattttcacaaggaatgggcgttggaatttcaaca 1646
|||| |||||||| |||||||||||||| ||| || | ||||| || ||||| |||||||
Sbjct: 3535109 agctgaaagctggcaatggtgaagatatattcccacgcaatggtcggtggaacttcaaca 3535050
Query: 1647 a 1647
|
Sbjct: 3535049 a 3535049
Score = 48.1 bits (24), Expect = 0.20
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 2873 ccggtgcaggagctgcctcgtctccatgagaaagtccgcagcagcatgttcttctgctga 2932
||||||| ||||||||||| |||||||||||||| | ||| |||||| |||||||||
Sbjct: 3532540 ccggtgcctgagctgcctcgcctccatgagaaagtgaggagctccatgtttttctgctga 3532481
Score = 46.1 bits (23), Expect = 0.79
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 2765 tgctatgcacatcttgcagctgctcaggtgg 2795
|||||||| |||||||| |||||||||||||
Sbjct: 3532645 tgctatgcccatcttgctgctgctcaggtgg 3532615
Score = 44.1 bits (22), Expect = 3.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2321 attgacttctacaccagttctggaaa 2346
|||||||||||||| |||||||||||
Sbjct: 3533833 attgacttctacactagttctggaaa 3533808
Score = 44.1 bits (22), Expect = 3.1
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 1385 caaaggtacaccaaatctttgagtaccctacaaagatcatctcttgttgagaagtccagg 1444
||||| ||||||||| ||||| || || ||||| || || ||||||||||| |||||
Sbjct: 3535503 caaagatacaccaaagctttgtcaacactgcaaaggtcctcccttgttgagaaatccaga 3535444
Query: 1445 cagaagcctcaagagaggatgtcagt 1470
|||||||| || || || ||||||||
Sbjct: 3535443 cagaagccccaggaaagaatgtcagt 3535418
>emb|AL606693.3 |OSJN00109 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0076A11,
complete sequence
Length = 127419
Score = 93.7 bits (47), Expect = 4e-15
Identities = 113/135 (83%)
Strand = Plus / Minus
Query: 865 gggctgcctgttagtccgtcagtcattttttcacaacaatccttcaaactttgtggactt 924
||||||||| ||||| || ||||||||||| |||||||||||| |||||||| ||| |
Sbjct: 125809 gggctgccttttagtacgccagtcatttttccacaacaatcctaataactttgttgacct 125750
Query: 925 gggtggaggggtaatgggctgcagaggtttccactcaagctttcgagccacacagagtgg 984
|||||| || || |||||||| |||| ||||| ||||| || || | ||||||||||||
Sbjct: 125749 gggtggtggtgtgatgggctgtcgaggattccattcaagtttccgtggcacacagagtgg 125690
Query: 985 gctttctctcaatat 999
|||||||| |||||
Sbjct: 125689 actttctctgaatat 125675
Score = 87.7 bits (44), Expect = 2e-13
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 2576 tgccatccaaggaattatgacttttacatgtgcgctcatgctggaatgattg 2627
||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 122408 tgccatccaaggaattatgacttctacatgtgtgctcatgctggaatgattg 122357
Score = 83.8 bits (42), Expect = 4e-12
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1001 gatgtttctaccacaatgattgtgaaacctggacctgttgttgattttctgctggccaac 1060
|||||||| || || |||||||| |||||||| |||||| | |||||||| || ||||||
Sbjct: 125529 gatgtttcgacaactatgattgttaaacctggtcctgttatcgattttcttcttgccaac 125470
Query: 1061 cagaaggttgaccaccctaacaaaattgattggc 1094
||||| ||||| |||||| ||| |||||||||||
Sbjct: 125469 cagaaagttgatcaccctgacagaattgattggc 125436
Score = 73.8 bits (37), Expect = 4e-09
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 2240 cagtcaccaaagctagaaatgatagattcattgttcaagccacaaggaactgaagatgat 2299
|||||||| |||||||||||||| ||| ||||| ||||||| ||||||||||||||||
Sbjct: 123311 cagtcacctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaagatgat 123252
Query: 2300 ggcct 2304
|||||
Sbjct: 123251 ggcct 123247
Score = 67.9 bits (34), Expect = 2e-07
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 545 gactttgcctatgatggtgaaaagagtctttttaccattggcgcccttccacaa 598
|||||||||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 126366 gactttgcctatgatggtgaaaagagcctgtttacaattggtgctcttccacaa 126313
Score = 56.0 bits (28), Expect = 8e-04
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 2474 aagttcacactgattgttgctcagaagaatca 2505
||||||||| ||||||||||||||||||||||
Sbjct: 122610 aagttcacagtgattgttgctcagaagaatca 122579
Score = 56.0 bits (28), Expect = 8e-04
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 445 tctgaagtatgaagatgacaggcctgttgatggaaaaggtgttggtagaaaagtcattga 504
|||||||||||| ||||| | || |||||||| ||||| || ||| |||| || |||||
Sbjct: 126466 tctgaagtatgaggatgatcgaccggttgatgggaaaggggtaggtcgaaaggtgattga 126407
Query: 505 taaactgcagca 516
||||||||||||
Sbjct: 126406 taaactgcagca 126395
Score = 54.0 bits (27), Expect = 0.003
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 1098 aggccaagcgtgcactcaagaatttaaggataaaaacaagcccagcaaatacagaataca 1157
||||||||||||| |||||||| || ||||||| ||| | ||| | ||| |||||| ||
Sbjct: 125336 aggccaagcgtgctctcaagaacttgaggataagaaccacccctgtgaattcagaattca 125277
Query: 1158 agattgttggtttgagtga 1176
|||| |||||||||||||
Sbjct: 125276 agatcattggtttgagtga 125258
Score = 50.1 bits (25), Expect = 0.051
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1587 agctcaaagctggaaatggtgaagatattttcacaaggaatgggcgttggaatttcaaca 1646
|||| |||||||| |||||||||||||| ||| || | ||||| || ||||| |||||||
Sbjct: 124404 agctgaaagctggcaatggtgaagatatattcccacgcaatggtcggtggaacttcaaca 124345
Query: 1647 a 1647
|
Sbjct: 124344 a 124344
Score = 48.1 bits (24), Expect = 0.20
Identities = 51/60 (85%)
Strand = Plus / Minus
Query: 2873 ccggtgcaggagctgcctcgtctccatgagaaagtccgcagcagcatgttcttctgctga 2932
||||||| ||||||||||| |||||||||||||| | ||| |||||| |||||||||
Sbjct: 121835 ccggtgcctgagctgcctcgcctccatgagaaagtgaggagctccatgtttttctgctga 121776
Score = 46.1 bits (23), Expect = 0.79
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 2765 tgctatgcacatcttgcagctgctcaggtgg 2795
|||||||| |||||||| |||||||||||||
Sbjct: 121940 tgctatgcccatcttgctgctgctcaggtgg 121910
Score = 44.1 bits (22), Expect = 3.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2321 attgacttctacaccagttctggaaa 2346
|||||||||||||| |||||||||||
Sbjct: 123128 attgacttctacactagttctggaaa 123103
Score = 44.1 bits (22), Expect = 3.1
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 1385 caaaggtacaccaaatctttgagtaccctacaaagatcatctcttgttgagaagtccagg 1444
||||| ||||||||| ||||| || || ||||| || || ||||||||||| |||||
Sbjct: 124798 caaagatacaccaaagctttgtcaacactgcaaaggtcctcccttgttgagaaatccaga 124739
Query: 1445 cagaagcctcaagagaggatgtcagt 1470
|||||||| || || || ||||||||
Sbjct: 124738 cagaagccccaggaaagaatgtcagt 124713
>emb|AL606655.3 |OSJN00103 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0040D15,
complete sequence
Length = 130618
Score = 93.7 bits (47), Expect = 4e-15
Identities = 113/135 (83%)
Strand = Plus / Minus
Query: 865 gggctgcctgttagtccgtcagtcattttttcacaacaatccttcaaactttgtggactt 924
||||||||| ||||| || ||||||||||| |||||||||||| |||||||| ||| |
Sbjct: 2780 gggctgccttttagtacgccagtcatttttccacaacaatcctaataactttgttgacct 2721
Query: 925 gggtggaggggtaatgggctgcagaggtttccactcaagctttcgagccacacagagtgg 984
|||||| || || |||||||| |||| ||||| ||||| || || | ||||||||||||
Sbjct: 2720 gggtggtggtgtgatgggctgtcgaggattccattcaagtttccgtggcacacagagtgg 2661
Query: 985 gctttctctcaatat 999
|||||||| |||||
Sbjct: 2660 actttctctgaatat 2646
Score = 83.8 bits (42), Expect = 4e-12
Identities = 81/94 (86%)
Strand = Plus / Minus
Query: 1001 gatgtttctaccacaatgattgtgaaacctggacctgttgttgattttctgctggccaac 1060
|||||||| || || |||||||| |||||||| |||||| | |||||||| || ||||||
Sbjct: 2500 gatgtttcgacaactatgattgttaaacctggtcctgttatcgattttcttcttgccaac 2441
Query: 1061 cagaaggttgaccaccctaacaaaattgattggc 1094
||||| ||||| |||||| ||| |||||||||||
Sbjct: 2440 cagaaagttgatcaccctgacagaattgattggc 2407
Score = 73.8 bits (37), Expect = 4e-09
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 2240 cagtcaccaaagctagaaatgatagattcattgttcaagccacaaggaactgaagatgat 2299
|||||||| |||||||||||||| ||| ||||| ||||||| ||||||||||||||||
Sbjct: 282 cagtcacctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaagatgat 223
Query: 2300 ggcct 2304
|||||
Sbjct: 222 ggcct 218
Score = 67.9 bits (34), Expect = 2e-07
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 545 gactttgcctatgatggtgaaaagagtctttttaccattggcgcccttccacaa 598
|||||||||||||||||||||||||| || ||||| ||||| || |||||||||
Sbjct: 3337 gactttgcctatgatggtgaaaagagcctgtttacaattggtgctcttccacaa 3284
Score = 56.0 bits (28), Expect = 8e-04
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 445 tctgaagtatgaagatgacaggcctgttgatggaaaaggtgttggtagaaaagtcattga 504
|||||||||||| ||||| | || |||||||| ||||| || ||| |||| || |||||
Sbjct: 3437 tctgaagtatgaggatgatcgaccggttgatgggaaaggggtaggtcgaaaggtgattga 3378
Query: 505 taaactgcagca 516
||||||||||||
Sbjct: 3377 taaactgcagca 3366
Score = 54.0 bits (27), Expect = 0.003
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 1098 aggccaagcgtgcactcaagaatttaaggataaaaacaagcccagcaaatacagaataca 1157
||||||||||||| |||||||| || ||||||| ||| | ||| | ||| |||||| ||
Sbjct: 2307 aggccaagcgtgctctcaagaacttgaggataagaaccacccctgtgaattcagaattca 2248
Query: 1158 agattgttggtttgagtga 1176
|||| |||||||||||||
Sbjct: 2247 agatcattggtttgagtga 2229
Score = 50.1 bits (25), Expect = 0.051
Identities = 52/61 (85%)
Strand = Plus / Minus
Query: 1587 agctcaaagctggaaatggtgaagatattttcacaaggaatgggcgttggaatttcaaca 1646
|||| |||||||| |||||||||||||| ||| || | ||||| || ||||| |||||||
Sbjct: 1375 agctgaaagctggcaatggtgaagatatattcccacgcaatggtcggtggaacttcaaca 1316
Query: 1647 a 1647
|
Sbjct: 1315 a 1315
Score = 44.1 bits (22), Expect = 3.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 2321 attgacttctacaccagttctggaaa 2346
|||||||||||||| |||||||||||
Sbjct: 99 attgacttctacactagttctggaaa 74
Score = 44.1 bits (22), Expect = 3.1
Identities = 70/86 (81%)
Strand = Plus / Minus
Query: 1385 caaaggtacaccaaatctttgagtaccctacaaagatcatctcttgttgagaagtccagg 1444
||||| ||||||||| ||||| || || ||||| || || ||||||||||| |||||
Sbjct: 1769 caaagatacaccaaagctttgtcaacactgcaaaggtcctcccttgttgagaaatccaga 1710
Query: 1445 cagaagcctcaagagaggatgtcagt 1470
|||||||| || || || ||||||||
Sbjct: 1709 cagaagccccaggaaagaatgtcagt 1684
>dbj|AP004499.1 | Lotus japonicus genomic DNA, chromosome 1, clone:LjT16N13, TM0031,
complete sequence
Length = 97191
Score = 93.7 bits (47), Expect = 4e-15
Identities = 98/115 (85%)
Strand = Plus / Plus
Query: 2439 aggcctgcaagttcttggatgaaaattggaaccccaagttcacactgattgttgctcaga 2498
||||||||||||| ||||||||| |||||||||||| ||| |||||||||||||||
Sbjct: 59296 aggcctgcaagtttctggatgaaacttggaaccccaaattcttggtgattgttgctcaga 59355
Query: 2499 agaatcaccacacaaagtttttcatgcctggatctcctgacaatgtccctcctgg 2553
|||| ||||| ||||| || ||| |||||| ||||| |||||||| ||||||||
Sbjct: 59356 agaaccaccatacaaaattcttccagcctggttctcccgacaatgtgcctcctgg 59410
Score = 54.0 bits (27), Expect = 0.003
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1994 agggtcaatgaccaatatctgacaaatgttttgctgaagatcaatgc 2040
|||||||| || |||||||| |||||||||||| ||||||| |||||
Sbjct: 57669 agggtcaacgatcaatatctcacaaatgttttgatgaagataaatgc 57715
Score = 48.1 bits (24), Expect = 0.20
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 542 aaagactttgcctatgatggtgaaaagagtctttttaccattgg 585
|||||||||||||||||||| || |||| | | |||||||||||
Sbjct: 54544 aaagactttgcctatgatggggagaagactttgtttaccattgg 54587
Score = 48.1 bits (24), Expect = 0.20
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 2592 atgacttttacatgtgcgctcatgctggaatgattg 2627
||||||| || |||||||| ||||||||||||||||
Sbjct: 59528 atgacttctatatgtgcgcacatgctggaatgattg 59563
>gb|AY104211.1 | Zea mays PCO124720 mRNA sequence
Length = 2052
Score = 91.7 bits (46), Expect = 1e-14
Identities = 251/318 (78%), Gaps = 1/318 (0%)
Strand = Plus / Plus
Query: 2324 gacttctacaccagttctggaaagagaaaaccagatcagatcatcatcttcagggatggt 2383
||||||||||| || ||||||||| |||||||||| || || || || |||||||||||
Sbjct: 1259 gacttctacactagctctggaaagcgaaaaccagaacacataattattttcagggatgga 1318
Query: 2384 gttagcgagagccagtttaatcaggtgctgaacatcgaattagatcaaattattgaggcc 2443
|| || || || ||||||| ||||| | ||||| || | ||||| || ||||||||
Sbjct: 1319 gtcagtgaaagtcagtttacccaggtcatcaacattgagctggatcagatcattgaggca 1378
Query: 2444 tgcaagttcttggatgaaaattggaaccccaagttcacactgattgttgctcagaagaat 2503
|| ||||| ||||||| || ||| ||||||||||| ||||||||||||| |||||
Sbjct: 1379 tgtaagtttctggatgagaagtggtcacccaagttcactgtgattgttgctcaaaagaac 1438
Query: 2504 caccacacaaagtt-tttcatgcctggatctcctgacaatgtccctcctggcactgttgt 2562
|| ||||| ||||| ||||| | | ||| || |||||||| | |||||| ||||| ||
Sbjct: 1439 catcacaccaagttctttcagacgggcatcaccagacaatgttcttcctggaactgtggt 1498
Query: 2563 tgataatgctgtctgccatccaaggaattatgacttttacatgtgcgctcatgctggaat 2622
|||| | || |||||||| | ||| | ||||| |||||||| || |||||||| ||
Sbjct: 1499 ggatagtaaagtttgccatcctaagaacttcgacttctacatgtgtgcacatgctgggat 1558
Query: 2623 gattgggacaacaaggcc 2640
|||||| |||||||||||
Sbjct: 1559 gattggaacaacaaggcc 1576
Score = 89.7 bits (45), Expect = 6e-14
Identities = 135/165 (81%)
Strand = Plus / Plus
Query: 1301 tctggtgatttcccttgtataaatgttgggaaacctaagcggccaacgtattttcccatc 1360
|||||||||||||| ||||||||| ||||| | ||||| ||||| |||||||| |||
Sbjct: 239 tctggtgatttcccctgtataaatacagggaaggcaaagcgcccaacatattttccaatc 298
Query: 1361 gagctctgccagctggtgcctttgcaaaggtacaccaaatctttgagtaccctacaaaga 1420
||||| ||| ||| || || | ||||| ||||||||| ||||| ||| ||||||||
Sbjct: 299 gagctatgctcgcttgttccgcttcaaagatacaccaaagctttgtctacgctacaaagg 358
Query: 1421 tcatctcttgttgagaagtccaggcagaagcctcaagagaggatg 1465
||||| ||||| |||||||| || ||||||||| |||| ||||||
Sbjct: 359 tcatcccttgtggagaagtctagacagaagcctgaagaaaggatg 403
Score = 61.9 bits (31), Expect = 1e-05
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 2691 tgcaggatcttgtgcattcgctctcttatgtgtaccaaaggagcacaacagcaatatcag 2750
||||||| |||| |||||||||||||| |||||||| |||||||| ||||| || ||||
Sbjct: 1627 tgcaggagtttgttcattcgctctcttacgtgtaccagaggagcacgacagccatctcag 1686
Query: 2751 ttgtttctcca 2761
| ||| |||||
Sbjct: 1687 tggttgctcca 1697
Score = 46.1 bits (23), Expect = 0.79
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 2876 gtgcaggagctgcctcgtctccatgagaaagtccgcagcagcatgttcttctgct 2930
|||| |||||||||||| || ||||| |||||| | ||| ||||||||||||||
Sbjct: 1812 gtgccggagctgcctcgcctgcatgacaaagtcaggagctccatgttcttctgct 1866
Score = 44.1 bits (22), Expect = 3.1
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 2028 tgaagatcaatgcaaaacttggtggaatgaactc 2061
|||||||||||||||| |||||||| |||||||
Sbjct: 966 tgaagatcaatgcaaagcttggtggtctgaactc 999
>gb|BT013764.1 | Lycopersicon esculentum clone 132647R, mRNA sequence
Length = 3104
Score = 83.8 bits (42), Expect = 4e-12
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 2573 gtctgccatccaaggaattatgacttttacatgtgcgctcatgctggaatgattgggaca 2632
||||| || ||||||||||||||||||||| |||| |||||||||||||||||||| |||
Sbjct: 2486 gtctgtcacccaaggaattatgacttttacctgtgtgctcatgctggaatgattggtaca 2545
Query: 2633 ac 2634
||
Sbjct: 2546 ac 2547
Score = 71.9 bits (36), Expect = 1e-08
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 2711 ctctcttatgtgtaccaaaggagcacaacagcaatatcagttgtttctccaatctgctat 2770
||||||||||||||||| || ||||| || |||||||| |||||| |||| ||||| |||
Sbjct: 2624 ctctcttatgtgtaccagagaagcaccactgcaatatctgttgttgctcctatctgttat 2683
Query: 2771 gcacatcttgcagctgctca 2790
|| |||||||| ||| ||||
Sbjct: 2684 gcccatcttgctgctactca 2703
Score = 50.1 bits (25), Expect = 0.051
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 545 gactttgcctatgatggtgaaaagagtctttttaccattgg 585
||||||||||||||||||||||| || | |||||||||||
Sbjct: 449 gactttgcctatgatggtgaaaaaagcttgtttaccattgg 489
Score = 50.1 bits (25), Expect = 0.051
Identities = 85/105 (80%)
Strand = Plus / Plus
Query: 1907 gagaggaagaactctgatgtttatggtccatggaagcgaaaatgccttgctgactttggg 1966
|||||||| |||| |||||| || || |||||||||||||| |||||||| | |||
Sbjct: 1817 gagaggaaaaactgtgatgtatacggaccatggaagcgaaagaatcttgctgagtatggc 1876
Query: 1967 attgtcactcaatgtgtggccccaacaagggtcaatgaccaatat 2011
||||| || || ||| | || |||||||| |||||||| ||||||
Sbjct: 1877 attgttacccagtgtatagctccaacaagagtcaatgatcaatat 1921
Score = 46.1 bits (23), Expect = 0.79
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 2129 atggatgtgtcccatggatcccctggacagtctgatataccatccattgcagcagttgt 2187
||||||||||||||||| || ||||| || |||||| | || || |||||||| |||||
Sbjct: 2039 atggatgtgtcccatggctctcctggccaatctgatgtcccttcaattgcagcggttgt 2097
>dbj|AK118258.1 | Arabidopsis thaliana At5g21150 mRNA for putative zwille/pinhead,
complete cds, clone: RAFL19-56-B01
Length = 3090
Score = 77.8 bits (39), Expect = 2e-10
Identities = 108/131 (82%)
Strand = Plus / Plus
Query: 2606 tgcgctcatgctggaatgattgggacaacaaggccaacacattaccatatcctgcatgat 2665
||||| |||||||| |||||||| || ||||||||||||||||||||| | ||| ||||
Sbjct: 2549 tgcgcccatgctggcatgattggaactacaaggccaacacattaccatgttctgtatgac 2608
Query: 2666 gagatacactttgccgcggatgacctgcaggatcttgtgcattcgctctcttatgtgtac 2725
||||| |||||| | || ||||| || || ||||||||||| || || ||||| |||
Sbjct: 2609 gagattgggtttgccacagacgacctccaagaacttgtgcattctctgtcctatgtctac 2668
Query: 2726 caaaggagcac 2736
|| ||||||||
Sbjct: 2669 cagaggagcac 2679
Score = 69.9 bits (35), Expect = 5e-08
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 2129 atggatgtgtcccatggatcccctggacagtctgatataccatccattgcagcagttgt 2187
|||||||| |||||||| |||||||| ||||||||||||||||| ||||| || |||||
Sbjct: 2072 atggatgtatcccatggttcccctggccagtctgatataccatcaattgctgctgttgt 2130
Score = 61.9 bits (31), Expect = 1e-05
Identities = 133/167 (79%)
Strand = Plus / Plus
Query: 2351 aaaccagatcagatcatcatcttcagggatggtgttagcgagagccagtttaatcaggtg 2410
|||||||| || ||||| || |||||||||||||| |||||| ||||| ||||| ||
Sbjct: 2294 aaaccagagcacatcattattttcagggatggtgtaagcgagtctcagttcaatcaagtt 2353
Query: 2411 ctgaacatcgaattagatcaaattattgaggcctgcaagttcttggatgaaaattggaac 2470
|| || || ||||| ||||| || || |||| |||||||| | ||||| | ||| |
Sbjct: 2354 cttaatattgaattggatcagatgatgcaggcatgcaagtttcttgatgatacgtggcat 2413
Query: 2471 cccaagttcacactgattgttgctcagaagaatcaccacacaaagtt 2517
|| ||||| ||| |||| ||||| |||||||| ||||||||||||||
Sbjct: 2414 ccgaagtttacagtgatagttgcccagaagaaccaccacacaaagtt 2460
Score = 48.1 bits (24), Expect = 0.20
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1026 aacctggacctgttgttgattttctgctggccaaccagaa 1065
||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 907 aacctggacctgtagttgatttcctgcttgctaaccagaa 946
>gb|AC131455.5 | Medicago truncatula clone mth1-42h9, complete sequence
Length = 96063
Score = 75.8 bits (38), Expect = 9e-10
Identities = 83/98 (84%)
Strand = Plus / Plus
Query: 2456 gatgaaaattggaaccccaagttcacactgattgttgctcagaagaatcaccacacaaag 2515
||||||||||||||||||||||| | |||||||||| ||||||||||| ||||||||
Sbjct: 87624 gatgaaaattggaaccccaagtttatggtgattgttgcccagaagaatcatcacacaaaa 87683
Query: 2516 tttttcatgcctggatctcctgacaatgtccctcctgg 2553
|| ||| ||| ||||||| |||||||| || |||||
Sbjct: 87684 ttcttccaacctcgatctccagacaatgtgccacctgg 87721
Score = 71.9 bits (36), Expect = 1e-08
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 1952 cttgctgactttgggattgtcactcaatgtgtggccccaacaagggtcaatgaccaatat 2011
||||| || ||||| ||||| ||||| ||| | || || || ||||| || ||||| |||
Sbjct: 78235 cttgcagagtttggaattgttactcagtgtatagctcctaccagggtgaacgaccagtat 78294
Query: 2012 ctgacaaatgttttgctgaagatcaatgcaaa 2043
||||| ||||||||||||||||||||||||||
Sbjct: 78295 ctgaccaatgttttgctgaagatcaatgcaaa 78326
Score = 71.9 bits (36), Expect = 1e-08
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 2486 attgttgctcagaagaatcaccacacaaagtttttcatgcctggatctcctgacaatgtc 2545
|||||||| ||||||||||| ||||||||||| ||| |||||||||||| || |||||
Sbjct: 79529 attgttgcccagaagaatcatcacacaaagttcttccagcctggatctccggataatgtg 79588
Query: 2546 cctcctgg 2553
||||||||
Sbjct: 79589 cctcctgg 79596
Score = 71.9 bits (36), Expect = 1e-08
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 2576 tgccatccaaggaattatgacttttacatgtgcgctcatgctggaatgattg 2627
|||||||| ||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 87833 tgccatcctaggaattatgatttttatatgtgtgctcatgctggaatgattg 87884
Score = 67.9 bits (34), Expect = 2e-07
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 1994 agggtcaatgaccaatatctgacaaatgttttgctgaagatcaatgcaaa 2043
||||| || ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 86446 agggtgaacgaccagtatctgaccaatgttttgctgaagatcaatgcaaa 86495
Score = 60.0 bits (30), Expect = 5e-05
Identities = 63/74 (85%)
Strand = Plus / Plus
Query: 1860 agtctaaacttcctggggctcccaagtttctgttgtgtgtccttgccgagaggaagaact 1919
|||| ||||| ||||| |||||||||||||| | ||| ||||| | ||||| |||||||
Sbjct: 78054 agtccaaactacctggtgctcccaagtttcttctttgtctcctttctgagagaaagaact 78113
Query: 1920 ctgatgtttatggt 1933
||||| ||||||||
Sbjct: 78114 ctgatctttatggt 78127
Score = 60.0 bits (30), Expect = 5e-05
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 2586 ggaattatgacttttacatgtgcgctcatgctggaatgattg 2627
|||||||||| || |||||||| |||||||||||||||||||
Sbjct: 79725 ggaattatgatttctacatgtgtgctcatgctggaatgattg 79766
Score = 60.0 bits (30), Expect = 5e-05
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 812 caagaagccattcgggttattgatatcatattgaggcaacactctgccaaacag 865
|||||||||||| ||||| ||||||| || ||||| ||||| ||||||||||||
Sbjct: 83859 caagaagccattagggttcttgatattatcttgagacaacattctgccaaacag 83912
Score = 48.1 bits (24), Expect = 0.20
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 1418 agatcatctcttgttgagaagtccaggcagaagcctcaagagaggatg 1465
||||| || ||||| || ||||| |||||||||||||||||| |||||
Sbjct: 76740 agatcctcccttgtggaaaagtctaggcagaagcctcaagagcggatg 76787
Score = 46.1 bits (23), Expect = 0.79
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1907 gagaggaagaactctgatgtttatggt 1933
|||||||||||||||||| ||||||||
Sbjct: 86264 gagaggaagaactctgatctttatggt 86290
Score = 44.1 bits (22), Expect = 3.1
Identities = 46/54 (85%)
Strand = Plus / Plus
Query: 812 caagaagccattcgggttattgatatcatattgaggcaacactctgccaaacag 865
|||||||| ||| ||||| |||| || || ||||||||||| |||||||||||
Sbjct: 75365 caagaagcgattagggttcttgacattatcttgaggcaacatgctgccaaacag 75418
Score = 44.1 bits (22), Expect = 3.1
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 2757 ctccaatctgctatgcacatcttgcagctgctcaggtggcgcagttcataaagtttga 2814
|||||||||||||||| ||| | || ||| |||| |||| |||||||| ||||||||
Sbjct: 80307 ctccaatctgctatgcccatttggctgcttctcaagtgggacagttcatgaagtttga 80364
>gb|AC124972.41 | Medicago truncatula clone mth2-24j4, complete sequence
Length = 124069
Score = 75.8 bits (38), Expect = 9e-10
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 2456 gatgaaaattggaaccccaagttcacactgattgttgctcagaagaatcaccacacaaag 2515
||||||||||||||||||||||| | |||||||||| ||||||||||| ||||||||
Sbjct: 66252 gatgaaaattggaaccccaagtttatggtgattgttgcccagaagaatcatcacacaaaa 66193
Query: 2516 tttttcatgcctggatctcctgacaatgtccctcctgg 2553
|| ||| ||| ||||||| |||||||| || |||||
Sbjct: 66192 ttcttccaacctcgatctccagacaatgtgccacctgg 66155
Score = 71.9 bits (36), Expect = 1e-08
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 2576 tgccatccaaggaattatgacttttacatgtgcgctcatgctggaatgattg 2627
|||||||| ||||||||||| ||||| ||||| |||||||||||||||||||
Sbjct: 66043 tgccatcctaggaattatgatttttatatgtgtgctcatgctggaatgattg 65992
Score = 71.9 bits (36), Expect = 1e-08
Identities = 60/68 (88%)
Strand = Plus / Minus
Query: 2486 attgttgctcagaagaatcaccacacaaagtttttcatgcctggatctcctgacaatgtc 2545
|||||||| ||||||||||| ||||||||||| ||| |||||||||||| || |||||
Sbjct: 74347 attgttgcccagaagaatcatcacacaaagttcttccagcctggatctccggataatgtg 74288
Query: 2546 cctcctgg 2553
||||||||
Sbjct: 74287 cctcctgg 74280
Score = 71.9 bits (36), Expect = 1e-08
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 1952 cttgctgactttgggattgtcactcaatgtgtggccccaacaagggtcaatgaccaatat 2011
||||| || ||||| ||||| ||||| ||| | || || || ||||| || ||||| |||
Sbjct: 75641 cttgcagagtttggaattgttactcagtgtatagctcctaccagggtgaacgaccagtat 75582
Query: 2012 ctgacaaatgttttgctgaagatcaatgcaaa 2043
||||| ||||||||||||||||||||||||||
Sbjct: 75581 ctgaccaatgttttgctgaagatcaatgcaaa 75550
Score = 67.9 bits (34), Expect = 2e-07
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 1994 agggtcaatgaccaatatctgacaaatgttttgctgaagatcaatgcaaa 2043
||||| || ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 67430 agggtgaacgaccagtatctgaccaatgttttgctgaagatcaatgcaaa 67381
Score = 60.0 bits (30), Expect = 5e-05
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 812 caagaagccattcgggttattgatatcatattgaggcaacactctgccaaacag 865
|||||||||||| ||||| ||||||| || ||||| ||||| ||||||||||||
Sbjct: 70017 caagaagccattagggttcttgatattatcttgagacaacattctgccaaacag 69964
Score = 60.0 bits (30), Expect = 5e-05
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 2586 ggaattatgacttttacatgtgcgctcatgctggaatgattg 2627
|||||||||| || |||||||| |||||||||||||||||||
Sbjct: 74151 ggaattatgatttctacatgtgtgctcatgctggaatgattg 74110
Score = 60.0 bits (30), Expect = 5e-05
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 1860 agtctaaacttcctggggctcccaagtttctgttgtgtgtccttgccgagaggaagaact 1919
|||| ||||| ||||| |||||||||||||| | ||| ||||| | ||||| |||||||
Sbjct: 75822 agtccaaactacctggtgctcccaagtttcttctttgtctcctttctgagagaaagaact 75763
Query: 1920 ctgatgtttatggt 1933
||||| ||||||||
Sbjct: 75762 ctgatctttatggt 75749
Score = 48.1 bits (24), Expect = 0.20
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 1418 agatcatctcttgttgagaagtccaggcagaagcctcaagagaggatg 1465
||||| || ||||| || ||||| |||||||||||||||||| |||||
Sbjct: 77136 agatcctcccttgtggaaaagtctaggcagaagcctcaagagcggatg 77089
Score = 46.1 bits (23), Expect = 0.79
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1907 gagaggaagaactctgatgtttatggt 1933
|||||||||||||||||| ||||||||
Sbjct: 67612 gagaggaagaactctgatctttatggt 67586
Score = 44.1 bits (22), Expect = 3.1
Identities = 49/58 (84%)
Strand = Plus / Minus
Query: 2757 ctccaatctgctatgcacatcttgcagctgctcaggtggcgcagttcataaagtttga 2814
|||||||||||||||| ||| | || ||| |||| |||| |||||||| ||||||||
Sbjct: 73569 ctccaatctgctatgcccatttggctgcttctcaagtgggacagttcatgaagtttga 73512
Score = 44.1 bits (22), Expect = 3.1
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 812 caagaagccattcgggttattgatatcatattgaggcaacactctgccaaacag 865
|||||||| ||| ||||| |||| || || ||||||||||| |||||||||||
Sbjct: 78511 caagaagcgattagggttcttgacattatcttgaggcaacatgctgccaaacag 78458
>gb|AC069325.6 |AC069325 Genomic Sequence For Arabidopsis thaliana Clone T10F18 From Chromosome
V, complete sequence
Length = 84413
Score = 67.9 bits (34), Expect = 2e-07
Identities = 46/50 (92%)
Strand = Plus / Minus
Query: 2129 atggatgtgtcccatggatcccctggacagtctgatataccatccattgc 2178
|||||||| |||||||| |||||||| ||||||||||||||||| |||||
Sbjct: 13508 atggatgtatcccatggttcccctggccagtctgatataccatcaattgc 13459
Score = 52.0 bits (26), Expect = 0.013
Identities = 49/56 (87%), Gaps = 3/56 (5%)
Strand = Plus / Plus
Query: 2126 ggaatggatgtgtcccatggatcccctggacagtctg---atataccatccattgc 2178
||||||||||| || ||||| || ||||||||||||| ||||||||||||||||
Sbjct: 68625 ggaatggatgtatctcatggttctcctggacagtctgatcatataccatccattgc 68680
Score = 48.1 bits (24), Expect = 0.20
Identities = 75/92 (81%)
Strand = Plus / Minus
Query: 2633 acaaggccaacacattaccatatcctgcatgatgagatacactttgccgcggatgacctg 2692
||||||||||||||||||||| | ||| |||| ||||| |||||| | || |||||
Sbjct: 12397 acaaggccaacacattaccatgttctgtatgacgagattgggtttgccacagacgacctc 12338
Query: 2693 caggatcttgtgcattcgctctcttatgtgta 2724
|| || ||||||||||| || || ||||||||
Sbjct: 12337 caagaacttgtgcattctctgtcctatgtgta 12306
Score = 48.1 bits (24), Expect = 0.20
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 2474 aagttcacactgattgttgctcagaagaatcaccacacaaagtt 2517
||||| ||| |||| ||||| |||||||| ||||||||||||||
Sbjct: 12733 aagtttacagtgatagttgcccagaagaaccaccacacaaagtt 12690
Score = 48.1 bits (24), Expect = 0.20
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1026 aacctggacctgttgttgattttctgctggccaaccagaa 1065
||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 15382 aacctggacctgtagttgatttcctgcttgctaaccagaa 15343
Score = 46.1 bits (23), Expect = 0.79
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1016 atgattgtgaaacctggacctgttgttgattttct 1050
||||| || |||||||| |||||||||||||||||
Sbjct: 66741 atgatagtaaaacctggtcctgttgttgattttct 66775
>ref|NM_128262.2 | Arabidopsis thaliana AGO4 (ARGONAUTE 4) (AGO4) mRNA, complete cds
Length = 3166
Score = 61.9 bits (31), Expect = 1e-05
Identities = 109/135 (80%)
Strand = Plus / Plus
Query: 2345 aagagaaaaccagatcagatcatcatcttcagggatggtgttagcgagagccagtttaat 2404
|||||||||||||| || ||||| || |||||||||||||| || || || || |||
Sbjct: 2321 aagagaaaaccagagcatatcataattttcagggatggtgtgagtgaatctcaattcaat 2380
Query: 2405 caggtgctgaacatcgaattagatcaaattattgaggcctgcaagttcttggatgaaaat 2464
||||| ||||| || ||| | ||||| || || ||||| |||||| |||| || | ||||
Sbjct: 2381 caggttctgaatattgaacttgatcagatcatcgaggcttgcaagctcttagacgcaaat 2440
Query: 2465 tggaaccccaagttc 2479
|||||||| ||||||
Sbjct: 2441 tggaacccaaagttc 2455
Score = 54.0 bits (27), Expect = 0.003
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 2693 caggatcttgtgcattcgctctcttatgtgtaccaaaggagcacaacagcaatatcagtt 2752
||||| ||||| || |||||||| |||||||||||||| ||||| | || || || |||
Sbjct: 2669 caggaacttgtccactcgctctcctatgtgtaccaaagaagcaccagtgccatttctgtt 2728
Query: 2753 gtttctccaatctgctatgcacatcttgcagctgctcag 2791
||| | || ||||||||||| || | ||||||||||||
Sbjct: 2729 gttgcgccgatctgctatgctcacttggcagctgctcag 2767
Score = 50.1 bits (25), Expect = 0.051
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 824 cgggttattgatatcatattgaggcaaca 852
|||||| ||||||||||||||||||||||
Sbjct: 794 cgggttcttgatatcatattgaggcaaca 822
Score = 48.1 bits (24), Expect = 0.20
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 2129 atggatgtgtcccatggatcccctggacagtctgat 2164
|||||||| || |||||||| |||||||||||||||
Sbjct: 2105 atggatgtttcacatggatctcctggacagtctgat 2140
Score = 46.1 bits (23), Expect = 0.79
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1427 cttgttgagaagtccaggcagaagcctcaagagaggatg 1465
||||||||||| ||||| ||||| || ||||||||||||
Sbjct: 1400 cttgttgagaaatccagacagaaaccccaagagaggatg 1438
>gb|AY051033.1 | Arabidopsis thaliana putative argonaute AGO1 protein (At2g27040)
mRNA, complete cds
Length = 2806
Score = 61.9 bits (31), Expect = 1e-05
Identities = 109/135 (80%)
Strand = Plus / Plus
Query: 2345 aagagaaaaccagatcagatcatcatcttcagggatggtgttagcgagagccagtttaat 2404
|||||||||||||| || ||||| || |||||||||||||| || || || || |||
Sbjct: 2191 aagagaaaaccagagcatatcataattttcagggatggtgtgagtgaatctcaattcaat 2250
Query: 2405 caggtgctgaacatcgaattagatcaaattattgaggcctgcaagttcttggatgaaaat 2464
||||| ||||| || ||| | ||||| || || ||||| |||||| |||| || | ||||
Sbjct: 2251 caggttctgaatattgaacttgatcagatcatcgaggcttgcaagctcttagacgcaaat 2310
Query: 2465 tggaaccccaagttc 2479
|||||||| ||||||
Sbjct: 2311 tggaacccaaagttc 2325
Score = 54.0 bits (27), Expect = 0.003
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 2693 caggatcttgtgcattcgctctcttatgtgtaccaaaggagcacaacagcaatatcagtt 2752
||||| ||||| || |||||||| |||||||||||||| ||||| | || || || |||
Sbjct: 2539 caggaacttgtccactcgctctcctatgtgtaccaaagaagcaccagtgccatttctgtt 2598
Query: 2753 gtttctccaatctgctatgcacatcttgcagctgctcag 2791
||| | || ||||||||||| || | ||||||||||||
Sbjct: 2599 gttgcgccgatctgctatgctcacttggcagctgctcag 2637
Score = 50.1 bits (25), Expect = 0.051
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 824 cgggttattgatatcatattgaggcaaca 852
|||||| ||||||||||||||||||||||
Sbjct: 664 cgggttcttgatatcatattgaggcaaca 692
Score = 48.1 bits (24), Expect = 0.20
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 2129 atggatgtgtcccatggatcccctggacagtctgat 2164
|||||||| || |||||||| |||||||||||||||
Sbjct: 1975 atggatgtttcacatggatctcctggacagtctgat 2010
Score = 46.1 bits (23), Expect = 0.79
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1427 cttgttgagaagtccaggcagaagcctcaagagaggatg 1465
||||||||||| ||||| ||||| || ||||||||||||
Sbjct: 1270 cttgttgagaaatccagacagaaaccccaagagaggatg 1308
>gb|AY035081.1 | Arabidopsis thaliana putative Argonaute (AGO1) protein (At2g27040)
mRNA, complete cds
Length = 3171
Score = 61.9 bits (31), Expect = 1e-05
Identities = 109/135 (80%)
Strand = Plus / Plus
Query: 2345 aagagaaaaccagatcagatcatcatcttcagggatggtgttagcgagagccagtttaat 2404
|||||||||||||| || ||||| || |||||||||||||| || || || || |||
Sbjct: 2321 aagagaaaaccagagcatatcataattttcagggatggtgtgagtgaatctcaattcaat 2380
Query: 2405 caggtgctgaacatcgaattagatcaaattattgaggcctgcaagttcttggatgaaaat 2464
||||| ||||| || ||| | ||||| || || ||||| |||||| |||| || | ||||
Sbjct: 2381 caggttctgaatattgaacttgatcagatcatcgaggcttgcaagctcttagacgcaaat 2440
Query: 2465 tggaaccccaagttc 2479
|||||||| ||||||
Sbjct: 2441 tggaacccaaagttc 2455
Score = 54.0 bits (27), Expect = 0.003
Identities = 81/99 (81%)
Strand = Plus / Plus
Query: 2693 caggatcttgtgcattcgctctcttatgtgtaccaaaggagcacaacagcaatatcagtt 2752
||||| ||||| || |||||||| |||||||||||||| ||||| | || || || |||
Sbjct: 2669 caggaacttgtccactcgctctcctatgtgtaccaaagaagcaccagtgccatttctgtt 2728
Query: 2753 gtttctccaatctgctatgcacatcttgcagctgctcag 2791
||| | || ||||||||||| || | ||||||||||||
Sbjct: 2729 gttgcgccgatctgctatgctcacttggcagctgctcag 2767
Score = 50.1 bits (25), Expect = 0.051
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 824 cgggttattgatatcatattgaggcaaca 852
|||||| ||||||||||||||||||||||
Sbjct: 794 cgggttcttgatatcatattgaggcaaca 822
Score = 48.1 bits (24), Expect = 0.20
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 2129 atggatgtgtcccatggatcccctggacagtctgat 2164
|||||||| || |||||||| |||||||||||||||
Sbjct: 2105 atggatgtttcacatggatctcctggacagtctgat 2140
Score = 46.1 bits (23), Expect = 0.79
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1427 cttgttgagaagtccaggcagaagcctcaagagaggatg 1465
||||||||||| ||||| ||||| || ||||||||||||
Sbjct: 1400 cttgttgagaaatccagacagaaaccccaagagaggatg 1438
>gb|U01338.1 |U01338 Bos taurus insulin-like growth factor 1 gene, exons 3 and 4
Length = 657
Score = 44.1 bits (22), Expect = 3.1
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 1460 aggatgtcagttttgtctgatg 1481
||||||||||||||||||||||
Sbjct: 310 aggatgtcagttttgtctgatg 289
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 608,944,097
Number of extensions: 32119123
Number of successful extensions: 184235
Number of sequences better than 10.0: 76
Number of HSP's gapped: 184175
Number of HSP's successfully gapped: 338
Length of query: 3227
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 3204
Effective length of database: 18,503,978,556
Effective search space: 59286747293424
Effective search space used: 59286747293424
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)