ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58d19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AY156513:Os04g0653200 | 46 | 4e-05 | 2 | AK073795:Os04g0653200 | 46 | 4e-05 | 3 | AK069928:Os03g0397400 | 46 | 4e-05 | 4 | AK100765:Os01g0557500 | 32 | 0.72 | 5 | AF489111:Os01g0557500 | 32 | 0.72 | 6 | AB112656:Os01g0557500 | 32 | 0.72 | 7 | Os02g0653400:Os02g0653400 | 31 | 1.6 | 8 | AK069021:Os05g0594200 | 31 | 1.6 | 9 | AK073142:Os05g0411300 | 29 | 4.7 | 10 | Os01g0374400:Os01g0374400 | 28 | 8.0 |
|---|
>AY156513:Os04g0653200 | Length = 417 Score = 46.2 bits (108), Expect = 4e-05 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%) Frame = +2 Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLFSWMSCPS**RPVNKESVCHINRIILLH 469 IYA NGMI V++QS+LGS+LSN +LV+GC F+ V ++ +N +LL Sbjct: 124 IYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGLLLM 183 Query: 470 LIMNTNH-IILLTTQSSVLKSASK 538 +M +L T S V + AS+ Sbjct: 184 AVMGLMFPAVLHFTHSEVRQGASE 207
>AK073795:Os04g0653200 | Length = 417 Score = 46.2 bits (108), Expect = 4e-05 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%) Frame = +2 Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLFSWMSCPS**RPVNKESVCHINRIILLH 469 IYA NGMI V++QS+LGS+LSN +LV+GC F+ V ++ +N +LL Sbjct: 124 IYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGLLLM 183 Query: 470 LIMNTNH-IILLTTQSSVLKSASK 538 +M +L T S V + AS+ Sbjct: 184 AVMGLMFPAVLHFTHSEVRQGASE 207
>AK069928:Os03g0397400 | Length = 437 Score = 46.2 bits (108), Expect = 4e-05 Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%) Frame = +2 Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLFS-WMSCPS**RPVNKESVCHINRIILL 466 +YA NGMI V++QS+LGS+LSN +LVLGC F+ + PS + NK S + ++L+ Sbjct: 145 LYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLM 204 Query: 467 HLIMNTNHIILLTTQSSV 520 ++ +L T S V Sbjct: 205 AVLGLMFPAVLHFTHSEV 222
>AK100765:Os01g0557500 | Length = 451 Score = 32.0 bits (71), Expect = 0.72 Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%) Frame = +2 Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLF 388 ++A G I V++ S+LGSVLSN +LVLG LF Sbjct: 137 LFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLF 169
>AF489111:Os01g0557500 | Length = 354 Score = 32.0 bits (71), Expect = 0.72 Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%) Frame = +2 Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLF 388 ++A G I V++ S+LGSVLSN +LVLG LF Sbjct: 27 LFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLF 59
>AB112656:Os01g0557500 | Length = 451 Score = 32.0 bits (71), Expect = 0.72 Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%) Frame = +2 Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLF 388 ++A G I V++ S+LGSVLSN +LVLG LF Sbjct: 137 LFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLF 169
>Os02g0653400:Os02g0653400 | Length = 445 Score = 30.8 bits (68), Expect = 1.6 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +2 Query: 11 PSPHQTPCAPVRHD-RPLRSLLHLSRQPRRHDPMCPK 118 P+P +PCA VR D RP R+LL + PR P CPK Sbjct: 27 PNPSTSPCAAVRADGRPARALLP-TACPR--SPSCPK 60
>AK069021:Os05g0594200 | Length = 453 Score = 30.8 bits (68), Expect = 1.6 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%) Frame = +2 Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLF 388 + A G I V++ S+LGS+LSN +LVLG LF Sbjct: 145 LLALREGKIEVVKCSLLGSILSNLLLVLGTSLF 177
>AK073142:Os05g0411300 | Length = 646 Score = 29.3 bits (64), Expect = 4.7 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +3 Query: 618 ATTSTSIVGAKDDLKHLEEAEGRTGGGNKKLRL 716 A+ S G+ ++KH E EGR+GGG+ K L Sbjct: 91 ASNSAVANGSGGEVKHEESDEGRSGGGDPKWSL 123
>Os01g0374400:Os01g0374400 | Length = 666 Score = 28.5 bits (62), Expect = 8.0 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = -3 Query: 510 CVVNKII*FVFMIRCNKIILLM*HTDSLFT 421 C V K+ F +++ C +LL+ HTD ++ Sbjct: 509 CPVEKLFGFAYLVNCESEVLLIGHTDRSYS 538 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 28,241,437 Number of extensions: 607508 Number of successful extensions: 1608 Number of sequences better than 10.0: 10 Number of HSP's gapped: 1607 Number of HSP's successfully gapped: 10 Length of query: 339 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 238 Effective length of database: 11,355,714 Effective search space: 2702659932 Effective search space used: 2702659932 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
