ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58d19 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g27960:12003.t02469:unspliced-genomic vacuolar cation/proton exchanger 2, putative, expressed| Length = 4019 Score = 43.2 bits (88), Expect(2) = 2e-05 Identities = 16/27 (59%), Positives = 24/27 (88%) Frame = +2 / +3 Query: 293 IYASDNGMIHVIRQSMLGSVLSNILVL 373 +YA NGMI V++QS+LGS+LSN+L++ Sbjct: 1050 LYALKNGMIRVVQQSLLGSILSNMLLV 1130 Score = 25.4 bits (49), Expect(2) = 2e-05 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = +3 / +3 Query: 384 FFHGCLAHPNRDQ 422 FF G L HP+RDQ Sbjct: 1143 FFAGGLVHPSRDQ 1181 Score = 29.5 bits (58), Expect(2) = 0.29 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -2 / -2 Query: 466 QQNYPVDVTHRFFVYWSLLGWARHP*KK 383 ++NY + WSLLGW R P KK Sbjct: 1225 KENYCIVHKATLLKTWSLLGWTRPPAKK 1142 Score = 24.4 bits (47), Expect(2) = 0.29 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -3 / -2 Query: 372 STNILDNTEPSID*RMT*IIPLSDAY 295 + ++ D+ EPS D T IIP +AY Sbjct: 1129 TNSMFDSIEPSSDCWTTRIIPFFNAY 1052
>LOC_Os04g55940:12004.t05066:unspliced-genomic vacuolar cation/proton exchanger 3, putative, expressed| Length = 4719 Score = 44.1 bits (90), Expect = 0.002 Identities = 17/27 (62%), Positives = 24/27 (88%) Frame = +2 / +3 Query: 293 IYASDNGMIHVIRQSMLGSVLSNILVL 373 IYA NGMI V++QS+LGS+LSN+L++ Sbjct: 1497 IYALKNGMIRVVQQSLLGSILSNMLLV 1577 Score = 30.4 bits (60), Expect(2) = 2.3 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -3 / -3 Query: 372 STNILDNTEPSID*RMT*IIPLSDAYI 292 + NI DN EPS D T IIP AYI Sbjct: 1576 TNNIFDNMEPSNDC*TTRIIPFFKAYI 1496 Score = 25.8 bits (50), Expect(2) = 2.3 Identities = 8/11 (72%), Positives = 8/11 (72%) Frame = -1 / -3 Query: 272 TCWTSVACNKP 240 TCWTSV C P Sbjct: 1354 TCWTSVYCELP 1322
>LOC_Os06g39190:12006.t03617:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5183 Score = 31.3 bits (62), Expect(2) = 0.069 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +2 / -3 Query: 8 LPSPHQTPCAPVRHDRPLRSLLHLSRQPRRHDPMCPK 118 LP P P HD RSL L + P+ H P CP+ Sbjct: 5127 LPPPLLLPP*EPCHDPHERSLPQLQKGPQSHPPHCPQ 5017 Score = 30.4 bits (60), Expect(2) = 0.069 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = +2 / -3 Query: 611 WRRHHQHEHCWCKG*SEAP 667 W HH+ H WC+ SE P Sbjct: 4419 WASHHES*HDWCESESETP 4363
>LOC_Os10g05360:12010.t00413:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 1851 Score = 31.3 bits (62), Expect(2) = 0.12 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +2 / -3 Query: 8 LPSPHQTPCAPVRHDRPLRSLLHLSRQPRRHDPMCPK 118 LP P P HD RSL L + P+ H P CP+ Sbjct: 1795 LPPPLLLPP*EPCHDPHERSLPQLQKGPQSHPPHCPQ 1685 Score = 28.1 bits (55), Expect(2) = 0.12 Identities = 8/19 (42%), Positives = 10/19 (52%) Frame = +2 / -3 Query: 611 WRRHHQHEHCWCKG*SEAP 667 W HH+ H WC+ E P Sbjct: 1087 WASHHES*HDWCESEPETP 1031
>LOC_Os02g04630:12002.t00362:unspliced-genomic sodium/calcium exchanger protein, expressed| Length = 5648 Score = 37.7 bits (76), Expect = 0.13 Identities = 13/27 (48%), Positives = 22/27 (81%) Frame = +2 / +3 Query: 293 IYASDNGMIHVIRQSMLGSVLSNILVL 373 I+A G +HV++Q +LGS+LSN+L++ Sbjct: 3207 IHALSRGKLHVVQQCLLGSILSNLLLV 3287
>LOC_Os03g35788:12003.t03060:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 9729 Score = 29.0 bits (57), Expect(3) = 0.18 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +2 / -3 Query: 47 HDRPLRSLLHLSRQPRRHDPMCPK 118 HD RSL L + P+ H P CP+ Sbjct: 9637 HDPHERSLPQLQKGPQSHPPHCPQ 9566 Score = 28.1 bits (55), Expect(3) = 0.18 Identities = 8/19 (42%), Positives = 10/19 (52%) Frame = +2 / -3 Query: 611 WRRHHQHEHCWCKG*SEAP 667 W HH+ H WC+ E P Sbjct: 8968 WASHHES*HDWCESEPETP 8912 Score = 24.9 bits (48), Expect(3) = 0.18 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = +1 / -2 Query: 745 TCASHPIFVELC*C 786 TC +HPIF++L C Sbjct: 2717 TCTTHPIFLKLNIC 2676
>LOC_Os12g27350:12012.t02448:unspliced-genomic 10-deacetylbaccatin III 10-O-acetyltransferase, putative| Length = 3511 Score = 36.3 bits (73), Expect = 0.35 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 / +3 Query: 693 GGNKKLRLSLMLCVINKNLCFSSNLCRTMLMCDYALVGPFCC 818 G N K+ + + C + KNL S N+ RT+L C Y + + C Sbjct: 801 GLNLKIFIHFITCTLIKNLAKSYNVKRTLLHCKYTVQTTYTC 926
>LOC_Os02g54050:12002.t04984:unspliced-genomic transcriptional factor TINY, putative, expressed| Length = 669 Score = 30.9 bits (61), Expect(2) = 0.52 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -2 / -1 Query: 112 AHGIVPTRLTGEVEKGAQGPVVADWSTGGLVRGRK 8 A G+ R EVE GA G V A+ GG+ R R+ Sbjct: 297 AAGVARRRRVREVEVGAGGAVAAERDEGGVERPRR 193 Score = 24.9 bits (48), Expect(2) = 0.52 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 / -1 Query: 234 RARRRHPRQWTTMAAKKAGKRQRGRQI 154 R RRR ++ MAA AG+R + R++ Sbjct: 570 RRRRRRLQEVVGMAAAPAGRRVQRRRV 490
>LOC_Os11g35540:12011.t03101:unspliced-genomic expressed protein| Length = 4048 Score = 35.0 bits (70), Expect = 0.90 Identities = 16/37 (43%), Positives = 22/37 (59%) Frame = -3 / +1 Query: 243 AISRARRRHPRQWTTMAAKKAGKRQRGRQIPVTTIAA 133 A + RRRHPR T A + A R+RG+Q V +A+ Sbjct: 988 AAATTRRRHPRGLVTCACRTAA*RERGKQAWVPYMAS 1098
>LOC_Os05g06680:12005.t00558:unspliced-genomic expressed protein| Length = 5407 Score = 35.0 bits (70), Expect = 0.90 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = -3 / +3 Query: 237 SRARRRHPRQWTTMAAKKAGKRQRGRQIPVTTIA 136 S RRRH R+W + AA++ G +R ++ P +A Sbjct: 294 SPCRRRHRRRWCSWAARRMGGGRRPQESPAAPVA 395
>LOC_Os03g47702:12003.t005803:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 12437 Score = 35.0 bits (70), Expect = 0.90 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +3 / +1 Query: 3 PAFLPLTRPPVLQSATTGPCAPFSTSP 83 PA LPL RP A GPC+P T+P Sbjct: 5380 PALLPLCRPSSRMLAAHGPCSPRLTTP 5460
>LOC_Os09g01430:12009.t00045:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3448 Score = 29.9 bits (59), Expect(2) = 0.95 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +2 / -3 Query: 8 LPSPHQTPCAPVRHDRPLRSLLHLSRQPRRHDPMCPK 118 LP P P HD +SL L + P+ H P CP+ Sbjct: 3392 LPPPLLLPP*EPCHDPHEKSLPQLQKGPQSHPPHCPQ 3282 Score = 27.2 bits (53), Expect(2) = 0.95 Identities = 8/19 (42%), Positives = 10/19 (52%) Frame = +2 / -3 Query: 611 WRRHHQHEHCWCKG*SEAP 667 W HH+ H WC+ E P Sbjct: 2684 WACHHES*HDWCESEPETP 2628
>LOC_Os03g36600:12003.t03129:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5816 Score = 29.5 bits (58), Expect(2) = 1.1 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +2 / -3 Query: 47 HDRPLRSLLHLSRQPRRHDPMCPK 118 HD RSL L R P+ H P CP+ Sbjct: 5718 HDLHERSLPQLQRGPQIHPPHCPQ 5647 Score = 28.1 bits (55), Expect(2) = 1.1 Identities = 8/19 (42%), Positives = 10/19 (52%) Frame = +2 / -3 Query: 611 WRRHHQHEHCWCKG*SEAP 667 W HH+ H WC+ E P Sbjct: 4020 WASHHES*HDWCESEPETP 3964
>LOC_Os01g61230:12001.t05503:unspliced-genomic dihydroflavonol-4-reductase, putative, expressed| Length = 2023 Score = 34.5 bits (69), Expect = 1.2 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = +2 / +3 Query: 503 TTQSSVLKSASKSTKDTPKVRTTICNSKSRF 595 + + S S++ +T TP RT++CN++SRF Sbjct: 186 SARGSSASSSTAATPSTPPSRTSVCNTRSRF 278
>LOC_Os08g20220:12008.t01840:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 10081 Score = 28.1 bits (55), Expect(3) = 1.4 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 / +3 Query: 2 ASLPSPHQTPCAPVRHDRPLRSL 70 +SLPSPH AP+ PLR + Sbjct: 546 SSLPSPHACAAAPLSTRSPLRRI 614 Score = 25.8 bits (50), Expect(3) = 1.4 Identities = 6/20 (30%), Positives = 13/20 (65%) Frame = +3 / +3 Query: 798 LVGPFCCTPALVELFCCALV 857 ++ CC P L+++FC ++ Sbjct: 6348 MIRKLCCIPCLLKIFCVMML 6407 Score = 24.9 bits (48), Expect(3) = 1.4 Identities = 7/24 (29%), Positives = 12/24 (50%) Frame = +1 / +1 Query: 373 WMCSFFMDVLPILIETSKQRIGVS 444 W C +FM+ L L+ + +S Sbjct: 2737 WACKYFMESLSSLLSNGSSHMSIS 2808
>LOC_Os03g26990:12003.t02379:unspliced-genomic VQ motif family protein, expressed| Length = 1402 Score = 29.9 bits (59), Expect(2) = 1.9 Identities = 7/11 (63%), Positives = 10/11 (90%) Frame = -3 / -3 Query: 642 QQCSCWWWRRQ 610 ++ SCWWWRR+ Sbjct: 836 RESSCWWWRRR 804 Score = 24.9 bits (48), Expect(2) = 1.9 Identities = 10/21 (47%), Positives = 12/21 (57%) Frame = -3 / -3 Query: 234 RARRRHPRQWTTMAAKKAGKR 172 R RRR R+W + A K G R Sbjct: 320 RHRRRRGRRWWAVTATKGGCR 258
>LOC_Os07g38620:12007.t03526:unspliced-genomic root border cell-specific protein, putative, expressed| Length = 5579 Score = 33.6 bits (67), Expect = 2.3 Identities = 13/42 (30%), Positives = 22/42 (52%) Frame = -3 / +1 Query: 1008 FCQKHVYLRIDPLRNKYKTAN*LYIFHFSSTSHELQYIIHRF 883 FC Y+ + LRNKY++ +F T ++QY +H + Sbjct: 2869 FCMTLSYIILFMLRNKYRSVGLCIMFERFQTKKKMQYEVHTY 2994
>LOC_Os03g30060:12003.t02616:unspliced-genomic expressed protein| Length = 1419 Score = 33.6 bits (67), Expect = 2.3 Identities = 16/41 (39%), Positives = 20/41 (48%) Frame = +2 / +1 Query: 5 SLPSPHQTPCAPVRHDRPLRSLLHLSRQPRRHDPMCPKENG 127 S PSP P +P R RP S SR+P + P P+ G Sbjct: 109 SSPSPTSRPSSPARRTRPRPSPWRCSRRP*QGRPWVPQWRG 231
>LOC_Os02g39780:12002.t03614:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6975 Score = 33.6 bits (67), Expect = 2.3 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = +2 / -3 Query: 8 LPSPHQTPCAPVRHDRPLRSLLHLSRQPRRHDPMCPK 118 LPSP P HD RSL L + P+ H P CP+ Sbjct: 6883 LPSPLLLPP*EPCHDPHERSLPQLQKGPQSHPPHCPQ 6773
>LOC_Os09g04960:12009.t00392:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5963 Score = 33.1 bits (66), Expect = 3.2 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +3 / -2 Query: 3 PAFLPLTRPPVLQSATTGPC 62 PA++PL PP L S TTG C Sbjct: 88 PAWIPLRSPPPLSSPTTGSC 29
>LOC_Os08g19890:12008.t01807:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8831 Score = 33.1 bits (66), Expect = 3.2 Identities = 17/50 (34%), Positives = 19/50 (38%) Frame = +2 / -2 Query: 17 PHQTPCAPVRHDRPLRSLLHLSRQPRRHDPMCPKENGDKAAIVVTGICRP 166 P P P R P RS H R P CP+ +GDK C P Sbjct: 151 PPSPPRCPPRCRSPKRSTHHHHPDCRSPPPRCPRHDGDKGYRCCWTYCPP 2
>LOC_Os03g45750:12003.t03949:unspliced-genomic LOB domain protein 12, putative, expressed| Length = 2664 Score = 33.1 bits (66), Expect = 3.2 Identities = 16/32 (50%), Positives = 18/32 (56%) Frame = -3 / -1 Query: 228 RRRHPRQWTTMAAKKAGKRQRGRQIPVTTIAA 133 RRR +W T AA+ AG R R R P T AA Sbjct: 441 RRRPCGRWRTCAARPAGSRARTRTPPRTAAAA 346
>LOC_Os01g72700:12001.t06557:unspliced-genomic ATP binding protein, putative, expressed| Length = 3456 Score = 33.1 bits (66), Expect = 3.2 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = -3 / +2 Query: 636 CSCWWWRRQ 610 CSCWWWRR+ Sbjct: 26 CSCWWWRRR 52
>LOC_Os01g39040:12001.t03437:unspliced-genomic conserved hypothetical protein| Length = 1071 Score = 33.1 bits (66), Expect = 3.2 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +2 / -2 Query: 530 ASKSTKDTPKVRTTICNSKSRFHGSWNWRRHHQHE 634 AS ST PK R+T+C G W RH E Sbjct: 203 ASSSTFLMPKTRSTLCKRSGWLAGKWGANRHSSGE 99
>LOC_Os12g40510:12012.t03730:unspliced-genomic calcineurin B-like protein 3, putative, expressed| Length = 5044 Score = 26.3 bits (51), Expect(2) = 4.1 Identities = 5/8 (62%), Positives = 6/8 (75%) Frame = -3 / +2 Query: 642 QQCSCWWW 619 + C CWWW Sbjct: 437 RSCCCWWW 460 Score = 23.5 bits (45), Expect(2) = 4.1 Identities = 5/8 (62%), Positives = 7/8 (87%) Frame = -3 / +2 Query: 627 WWWRRQFQ 604 WWWRR ++ Sbjct: 461 WWWRRSWR 484
>LOC_Os10g10500:12010.t00856:unspliced-genomic vacuolar ATP synthase 91 kDa subunit, putative, expressed| Length = 8492 Score = 32.7 bits (65), Expect = 4.4 Identities = 10/35 (28%), Positives = 19/35 (54%) Frame = -3 / -2 Query: 207 WTTMAAKKAGKRQRGRQIPVTTIAALSPFSFGHMG 103 W + ++K+ G R +P+ + + F FGH+G Sbjct: 5761 WLSSSSKRGGTRAGAGAVPIRALVHKTLFGFGHLG 5657
>LOC_Os02g47280:12002.t04313:unspliced-genomic growth-regulating factor, putative, expressed| Length = 3824 Score = 32.7 bits (65), Expect = 4.4 Identities = 8/9 (88%), Positives = 8/9 (88%) Frame = -3 / +1 Query: 636 CSCWWWRRQ 610 CSCWWW RQ Sbjct: 1504 CSCWWWNRQ 1530
>LOC_Os02g35000:12002.t03138:unspliced-genomic chaperone protein dnaJ 10, putative, expressed| Length = 2858 Score = 32.7 bits (65), Expect = 4.4 Identities = 19/56 (33%), Positives = 24/56 (42%) Frame = +2 / +3 Query: 50 DRPLRSLLHLSRQPRRHDPMCPKENGDKAAIVVTGICRPRCRFPAFFAAIVVHCRG 217 DR LR L R+ RR DP G + ++ RC F FF +V C G Sbjct: 384 DRVLRRARRLPRRLRRRDPQGLLHQGLASCLLCQLCSESRC*FVFFFRFLVS*CPG 551
>LOC_Os04g17320:12004.t01484:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 6594 Score = 29.9 bits (59), Expect(2) = 5.4 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = +2 / -3 Query: 8 LPSPHQTPCAPVRHDRPLRSLLHLSRQPRRHDPMCPK 118 LP P P HD RSL L P+ H P CP+ Sbjct: 6538 LPPPLLLPP*EPCHDPHERSLPQLQTGPQSHPPHCPQ 6428 Score = 25.4 bits (49), Expect(2) = 5.4 Identities = 9/14 (64%), Positives = 11/14 (78%) Frame = +1 / -1 Query: 745 TCASHPIFVELC*C 786 TCA HPIF++L C Sbjct: 1323 TCAIHPIFLKLNIC 1282
>LOC_Os08g08060:12008.t00692:unspliced-genomic vacuolar protein sorting 18, putative, expressed| Length = 9742 Score = 31.8 bits (63), Expect(2) = 5.6 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +3 / +2 Query: 12 LPLTRPPVLQSATTGPCAPFST 77 LPL P +LQ +T+GP AP ST Sbjct: 320 LPLIAPLLLQISTSGPAAPAST 385 Score = 24.0 bits (46), Expect(2) = 5.6 Identities = 13/38 (34%), Positives = 21/38 (55%) Frame = +2 / +2 Query: 371 LGCVLFSWMSCPS**RPVNKESVCHINRIILLHLIMNT 484 L C LF **+P +S+C+I+ + L LI+ + Sbjct: 8939 LSCELFDRTCNSL**QPNTSKSLCNISIVHFLILIVQS 9052
>LOC_Os09g31980:12009.t02815:unspliced-genomic C1-like domain containing protein| Length = 1842 Score = 29.9 bits (59), Expect(2) = 5.8 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = +1 / -1 Query: 475 HEYKSYYFVDNTIISSKVCL*VNERHSQGQNHHL*F 582 H K YY V+N+I +S + * H+Q +HL F Sbjct: 729 HWIKEYYSVNNSITTSPLWN*KKNPHNQLNTYHLLF 622 Score = 23.5 bits (45), Expect(2) = 5.8 Identities = 7/12 (58%), Positives = 9/12 (75%) Frame = +2 / -3 Query: 83 RQPRRHDPMCPK 118 R+PRR P CP+ Sbjct: 1798 RRPRRSPPRCPR 1763
>LOC_Os11g29360:12011.t02541:unspliced-genomic pentatricopeptide repeat protein PPR986-12, putative, expressed| Length = 1484 Score = 32.2 bits (64), Expect = 6.1 Identities = 14/35 (40%), Positives = 16/35 (45%) Frame = +2 / +2 Query: 11 PSPHQTPCAPVRHDRPLRSLLHLSRQPRRHDPMCP 115 P H P PV RPLR R+PR H + P Sbjct: 80 PRRHPAPAEPVPPGRPLRDPARARRRPRGHARLRP 184
>LOC_Os11g01990:12011.t00095:unspliced-genomic expressed protein| Length = 1065 Score = 32.2 bits (64), Expect = 6.1 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +2 / -3 Query: 11 PSPHQTPCAPVRHDRPLRSLLHLSRQPRR 97 P P + PC P++HD P H R RR Sbjct: 871 PRPRRPPCQPLQHDLPYHKSGHQHRCRRR 785
>LOC_Os10g01720:12010.t00069:unspliced-genomic 3-N-debenzoyl-2-deoxytaxol N-benzoyltransferase, putative| Length = 3851 Score = 32.2 bits (64), Expect = 6.1 Identities = 17/30 (56%), Positives = 18/30 (60%) Frame = -3 / -2 Query: 240 ISRARRRHPRQWTTMAAKKAGKRQRGRQIP 151 ISR RRR RQ T MAA A + QRG P Sbjct: 409 ISRCRRRAARQSTGMAAAVARRGQRGAGQP 320
>LOC_Os05g34050:12005.t03000:unspliced-genomic DNA binding protein, putative, expressed| Length = 4301 Score = 32.2 bits (64), Expect = 6.1 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +3 / +1 Query: 618 ATTSTSIVGAKDDLKHLEEAEGRTGGGNKKLRL 716 A+ S G+ ++KH E EGR+GGG+ K L Sbjct: 442 ASNSAVANGSGGEVKHEESDEGRSGGGDPKWSL 540
>LOC_Os03g17030:12003.t01484:unspliced-genomic polyadenylate-binding protein 2, putative, expressed| Length = 4373 Score = 32.2 bits (64), Expect = 6.1 Identities = 13/42 (30%), Positives = 26/42 (61%) Frame = +2 / -3 Query: 416 RPVNKESVCHINRIILLHLIMNTNHIILLTTQSSVLKSASKS 541 + ++K+ +NRII H +MN +++I+L + + AS+S Sbjct: 2292 KTIHKQLYIKLNRIIRFHYLMNFHYLIILIS*VDYYQVASRS 2167
>LOC_Os01g40110:12001.t03537:unspliced-genomic RNA-binding protein, putative, expressed| Length = 2853 Score = 32.2 bits (64), Expect = 6.1 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -3 / +1 Query: 234 RARRRHPRQWTTMAAKKAGKRQRGRQIPVTTIAA 133 R RRR RQW +A+ AG R P T+ A Sbjct: 103 RRRRRQRRQWCGSSARTAGTTSRSPSSPATSAPA 204
>LOC_Os01g37690:12001.t03309:unspliced-genomic vacuolar cation/proton exchanger 1a, putative, expressed| Length = 5361 Score = 32.2 bits (64), Expect = 6.1 Identities = 13/27 (48%), Positives = 21/27 (77%) Frame = +2 / +1 Query: 293 IYASDNGMIHVIRQSMLGSVLSNILVL 373 ++A G I V++ S+LGSVLSN+L++ Sbjct: 2890 LFALLKGKIEVVKCSLLGSVLSNLLLV 2970
>LOC_Os06g07140:12006.t00598:unspliced-genomic proteasome subunit alpha type 4, putative, expressed| Length = 1137 Score = 28.1 bits (55), Expect(2) = 6.9 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +2 / +2 Query: 8 LPSPHQTPCAPVRHDRPLRSLLHLSR 85 +P HQ PVR PLR LL L R Sbjct: 422 IPLRHQAGVHPVRRPPPLRRLLPLRR 499 Score = 24.4 bits (47), Expect(2) = 6.9 Identities = 10/28 (35%), Positives = 15/28 (53%) Frame = +3 / +2 Query: 780 LMCDYALVGPFCCTPALVELFCCALVGP 863 LMC +A+ CC+ ++ L C L P Sbjct: 836 LMCWFAVPCDACCS*MVLSLLCFLLSKP 919
>LOC_Os02g39490:12002.t03587:unspliced-genomic carbonyl reductase 3, putative, expressed| Length = 5536 Score = 25.4 bits (49), Expect(2) = 7.2 Identities = 8/13 (61%), Positives = 11/13 (84%) Frame = +2 / -1 Query: 62 RSLLHLSRQPRRH 100 R +LHL ++PRRH Sbjct: 5071 RPVLHLGQEPRRH 5033 Score = 23.5 bits (45), Expect(2) = 7.2 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = +2 / -1 Query: 17 PHQTPCAPVRHDRPLRSL 70 PH+ P AP R RP+ L Sbjct: 5107 PHRRPPAPRRRPRPVLHL 5054
>LOC_Os05g05300:12005.t00420:unspliced-genomic CRS1 / YhbY domain containing protein, expressed| Length = 2670 Score = 25.8 bits (50), Expect(2) = 7.7 Identities = 10/19 (52%), Positives = 11/19 (57%) Frame = +2 / -3 Query: 38 PVRHDRPLRSLLHLSRQPR 94 P RH P+ L HLSR R Sbjct: 2284 PYRHQSPIPHLTHLSRYHR 2228 Score = 23.1 bits (44), Expect(2) = 7.7 Identities = 6/17 (35%), Positives = 8/17 (47%) Frame = +2 / -3 Query: 170 CRFPAFFAAIVVHCRGC 220 C F + +HC GC Sbjct: 2197 CCLSCIFPGLYIHCLGC 2147
>LOC_Os03g15690:12003.t01355:unspliced-genomic phosphate carrier protein, mitochondrial precursor, putative,| expressed Length = 3592 Score = 29.9 bits (59), Expect(2) = 7.7 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +2 / +1 Query: 35 APVRHDRPLRSLLHLSRQPRRHDP 106 A +RH RP R+ H PRRH P Sbjct: 520 AVLRHLRPRRAPQHRPHPPRRHSP 591 Score = 24.0 bits (46), Expect(2) = 7.7 Identities = 9/11 (81%), Positives = 9/11 (81%) Frame = +3 / +3 Query: 930 EIYTTNLQSCT 962 EIYTTNL CT Sbjct: 1809 EIYTTNLIHCT 1841
>LOC_Os12g02720:12012.t00165:unspliced-genomic GTP binding protein, putative, expressed| Length = 1184 Score = 31.8 bits (63), Expect = 8.3 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +2 / +3 Query: 29 PCAPVRHDRPLRSLLHLSRQPRRH 100 P P + D PLR L HL R+ RRH Sbjct: 345 PHHPPQEDEPLRQLDHLRRRRRRH 416
>LOC_Os11g06930:12011.t00585:unspliced-genomic CBS domain containing protein, expressed| Length = 5476 Score = 31.8 bits (63), Expect = 8.3 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +2 / -3 Query: 17 PHQTPCAPVRHDRPLRSLLHLSRQPRRHDPMCPKENGDK 133 P + P A +RH RPLR L + H P+ +E +K Sbjct: 473 PRRHPLASLRHRRPLRDRHRLRQPQLLHRPLPSEEKEEK 357
>LOC_Os11g02750:12011.t00167:unspliced-genomic GTP binding protein, putative, expressed| Length = 1118 Score = 31.8 bits (63), Expect = 8.3 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +2 / +1 Query: 29 PCAPVRHDRPLRSLLHLSRQPRRH 100 P P + D PLR L HL R+ RRH Sbjct: 349 PHHPPQEDEPLRQLDHLRRRRRRH 420
>LOC_Os09g34214:12009.t02997:unspliced-genomic indole-3-acetate beta-glucosyltransferase, putative, expressed| Length = 7145 Score = 31.8 bits (63), Expect = 8.3 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -3 / -2 Query: 243 AISRARRRHPRQWTTMAAKKAGKRQRGR 160 A R RRRHPR+ + AG+ +RGR Sbjct: 610 AARRRRRRHPRRRRPPRGRAAGRTRRGR 527
>LOC_Os08g06380:12008.t00528:unspliced-genomic CSLF6 - cellulose synthase-like family F; beta1,3;1,4 glucan| synthase, expressed Length = 6499 Score = 31.8 bits (63), Expect = 8.3 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = -3 / -1 Query: 234 RARRRHPRQWTTMAAKKAGKRQRGRQIPVTTIAALSPFSFGH 109 R RRRH R+ A ++ +R R++PV + P + GH Sbjct: 448 RRRRRHRRRPRARAHREPAHARRRRRVPVHPLIVPPPSAAGH 323
>LOC_Os06g16880:12006.t01561:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 4641 Score = 31.8 bits (63), Expect = 8.3 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = +2 / -1 Query: 524 KSASKSTKDTPKVRTTICNSKSRFHGSWNWR 616 ++A ++ T V IC+ S HG W WR Sbjct: 207 RTAWEAAASTASVSCLICSGDSA*HGGWRWR 115
>LOC_Os04g59200:12004.t05378:unspliced-genomic peroxidase 12 precursor, putative, expressed| Length = 1631 Score = 31.8 bits (63), Expect = 8.3 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = -3 / -1 Query: 639 QCSCWWWRRQ 610 +CSCWWWR + Sbjct: 227 RCSCWWWREE 198
>LOC_Os04g41930:12004.t03748:unspliced-genomic expressed protein| Length = 857 Score = 31.8 bits (63), Expect = 8.3 Identities = 15/39 (38%), Positives = 17/39 (43%) Frame = +2 / +3 Query: 53 RPLRSLLHLSRQPRRHDPMCPKENGDKAAIVVTGICRPR 169 RP R LLHL + PR P K + I RPR Sbjct: 639 RPRRRLLHLRKGPRHRSPAAAKPTARRCRIQARRRRRPR 755
>LOC_Os04g40060:12004.t03571:unspliced-genomic transposon protein, putative, unclassified, expressed| Length = 4608 Score = 31.8 bits (63), Expect = 8.3 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = +2 / -1 Query: 560 VRTTICNSKSRFHGSWNWRRHHQH 631 +R IC+ F W+W+ HH H Sbjct: 4017 IRNIICSPFFSFSSLWSWKPHHPH 3946
>LOC_Os03g02640:12003.t00153:unspliced-genomic expressed protein| Length = 3812 Score = 31.8 bits (63), Expect = 8.3 Identities = 15/66 (22%), Positives = 30/66 (45%) Frame = +1 / -1 Query: 256 TLVQQVVYYFLDDICIGQWNDSCHSSINARLCIIQYISTWMCSFFMDVLPILIETSKQRI 435 T+ QQ Y +D+ + CH+ + +QYI + + + PIL ++++ Sbjct: 3749 TVDQQ*DIYRFEDLSVDTVM*RCHNEFKTYILRLQYIEEKCQIYVLFLHPILFRGKRKKL 3570 Query: 436 GVSHQQ 453 + H Q Sbjct: 3569 SLQHPQ 3552
>LOC_Os02g38000:12002.t03438:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 5180 Score = 31.8 bits (63), Expect = 8.3 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +3 / +2 Query: 3 PAFLPLTRPPVLQSATTGPCAPFSTS 80 PA LPL RP A GPC+P T+ Sbjct: 641 PALLPLCRPSSRMLAAHGPCSPRLTT 718
>LOC_Os05g24820:12005.t02139:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 747 Score = 27.2 bits (53), Expect(2) = 8.4 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 / -3 Query: 243 AISRARRRHPRQWTTMAAKKAGKRQRGR 160 A SRARR HP M ++ +RGR Sbjct: 109 AASRARRPHPPLHRPMTMRERESEERGR 26 Score = 24.4 bits (47), Expect(2) = 8.4 Identities = 11/33 (33%), Positives = 15/33 (45%) Frame = -1 / -3 Query: 365 IYWIIQSLALIDE*HESFHCPMHISSRK*YTTC 267 + W++ SLAL S PM +S R C Sbjct: 649 VQWVVLSLALSPNPQSSSTLPMVVSPRSRLRLC 551
>LOC_Os02g29464:12002.t02640:unspliced-genomic DNA repair protein RAD50, putative, expressed| Length = 17813 Score = 28.6 bits (56), Expect(2) = 9.2 Identities = 14/42 (33%), Positives = 21/42 (50%) Frame = +3 / +3 Query: 36 LQSATTGPCAPFSTSPVNLVGTIPCAQXXXXXXXXXSSPGSV 161 L++ TT P P +T+P +L ++ A SSP SV Sbjct: 7182 LETTTTTPSPPLATAPPSLPSSLFAAAVEEPVMTMPSSPPSV 7307 Score = 27.2 bits (53), Expect(2) = 9.2 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = +2 / +1 Query: 587 SRFHGSWNWRRHHQHEHC 640 +R SW WRR H+ + C Sbjct: 7660 TRVSTSWGWRRLHEQQVC 7713
>LOC_Os05g26580:12005.t02313:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3400 Score = 27.6 bits (54), Expect(2) = 9.9 Identities = 10/25 (40%), Positives = 15/25 (60%) Frame = -2 / +2 Query: 151 GDDYRRLVAVLLWAHGIVPTRLTGE 77 GD + + +LWA+ P+R TGE Sbjct: 3110 GDSWIEELPAVLWANRTTPSRATGE 3184 Score = 25.8 bits (50), Expect(2) = 9.9 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -3 / +1 Query: 231 ARRRHPRQWTTMAAKKAGKRQRGRQIPVTT 142 ARRR R T AK+ +RG+ P+ T Sbjct: 454 ARRRRRRPTATATAKETRG*ERGKADPIRT 543 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 428,809,195 Number of extensions: 7210289 Number of successful extensions: 37214 Number of sequences better than 10.0: 56 Length of query: 339 Length of database: 55,613,886 Length adjustment: 50 Effective length of query: 289 Effective length of database: 52,799,986 Effective search space: 15259195954 Effective search space used: 15259195954 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
