ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf58d19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q6K1C4:CAX3_ORYSJ Vacuolar cation/proton exchanger 3 - Oryza sat... 46 2e-04
2Q5KQN0:CAX2_ORYSJ Vacuolar cation/proton exchanger 2 - Oryza sat... 46 2e-04
3Q39254:CAX2_ARATH Vacuolar cation/proton exchanger 2 - Arabidops... 40 0.001
4Q9LFZ8:CAX6_ARATH Putative vacuolar cation/proton exchanger 6 - ... 39 0.026
5Q8L783:CAX5_ARATH Vacuolar cation/proton exchanger 5 - Arabidops... 38 0.058
6Q6YXZ1:CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 - ... 37 0.099
7Q769E5:CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a - Oryza s... 32 4.2
8Q39253:CAX1_ARATH Vacuolar cation/proton exchanger 1 - Arabidops... 32 5.4
9Q976J5:ARGC_SULTO N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gam... 32 5.4
10Q99385:VCX1_YEAST Vacuolar calcium ion transporter - Saccharomyc... 31 7.1
11Q53R41:FAKD1_HUMAN FAST kinase domain-containing protein 1 - Hom... 31 7.1
12Q93Z81:CAX3_ARATH Vacuolar cation/proton exchanger 3 - Arabidops... 31 7.1
13Q5PBJ0:SYA_ANAMM Alanyl-tRNA synthetase - Anaplasma marginale (s... 31 9.3
14Q5TKG3:CAX1B_ORYSJ Vacuolar cation/proton exchanger 1b - Oryza s... 31 9.3

>Q6K1C4:CAX3_ORYSJ Vacuolar cation/proton exchanger 3 - Oryza sativa subsp. japonica|
           (Rice)
          Length = 417
 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
 Frame = +2

Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLFSWMSCPS**RPVNKESVCHINRIILLH 469
           IYA  NGMI V++QS+LGS+LSN +LV+GC  F+          V  ++   +N  +LL 
Sbjct: 124 IYALKNGMIRVVQQSLLGSILSNMLLVMGCAFFAGGIVHRNKDQVFSKATAVVNSGLLLM 183

Query: 470 LIMNTNH-IILLTTQSSVLKSASK 538
            +M      +L  T S V + AS+
Sbjct: 184 AVMGLMFPAVLHFTHSEVRQGASE 207



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>Q5KQN0:CAX2_ORYSJ Vacuolar cation/proton exchanger 2 - Oryza sativa subsp. japonica|
           (Rice)
          Length = 437

 Score = 46.2 bits (108), Expect = 2e-04
 Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
 Frame = +2

Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLFS-WMSCPS**RPVNKESVCHINRIILL 466
           +YA  NGMI V++QS+LGS+LSN +LVLGC  F+  +  PS  +  NK S    + ++L+
Sbjct: 145 LYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSRDQVFNKASAVVNSGLLLM 204

Query: 467 HLIMNTNHIILLTTQSSV 520
            ++      +L  T S V
Sbjct: 205 AVLGLMFPAVLHFTHSEV 222



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>Q39254:CAX2_ARATH Vacuolar cation/proton exchanger 2 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 441

 Score = 40.0 bits (92), Expect(2) = 0.001
 Identities = 19/33 (57%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
 Frame = +2

Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLF 388
           I+A  NGMI V++ ++LGS+LSN +LVLGC  F
Sbjct: 148 IFALKNGMIRVVQLTLLGSILSNMLLVLGCAFF 180



 Score = 23.1 bits (48), Expect(2) = 0.001
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 246 IACYTGPTSSVLL 284
           +ACYTGPT   LL
Sbjct: 122 LACYTGPTVGGLL 134



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>Q9LFZ8:CAX6_ARATH Putative vacuolar cation/proton exchanger 6 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 418

 Score = 39.3 bits (90), Expect = 0.026
 Identities = 20/33 (60%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
 Frame = +2

Query: 293 IYASDNGMIHVIRQSMLGSVLSNI-LVLGCVLF 388
           I A  NGMI V++ ++LGS+LSNI LVLGC  F
Sbjct: 130 IIALKNGMIRVVQLTLLGSILSNILLVLGCAFF 162



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>Q8L783:CAX5_ARATH Vacuolar cation/proton exchanger 5 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 441

 Score = 38.1 bits (87), Expect = 0.058
 Identities = 18/33 (54%), Positives = 26/33 (78%), Gaps = 1/33 (3%)
 Frame = +2

Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLF 388
           I+A  +GMI V++ ++LGS+LSN +LVLGC  F
Sbjct: 148 IFALKSGMIRVVQLTLLGSILSNMLLVLGCAFF 180



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>Q6YXZ1:CAX4_ORYSJ Putative vacuolar cation/proton exchanger 4 - Oryza sativa subsp.|
           japonica (Rice)
          Length = 447

 Score = 37.4 bits (85), Expect = 0.099
 Identities = 18/34 (52%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
 Frame = +2

Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLFS 391
           I+A   G +HV++Q +LGS+LSN +LVLG   FS
Sbjct: 141 IHALSRGKLHVVQQCLLGSILSNLLLVLGSAFFS 174



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>Q769E5:CAX1A_ORYSJ Vacuolar cation/proton exchanger 1a - Oryza sativa subsp. japonica|
           (Rice)
          Length = 451

 Score = 32.0 bits (71), Expect = 4.2
 Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
 Frame = +2

Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLF 388
           ++A   G I V++ S+LGSVLSN +LVLG  LF
Sbjct: 137 LFALLKGKIEVVKCSLLGSVLSNLLLVLGTSLF 169



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>Q39253:CAX1_ARATH Vacuolar cation/proton exchanger 1 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 463

 Score = 31.6 bits (70), Expect = 5.4
 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLF 388
           I A  N  + V++ S+LGS+LSN +LVLG  LF
Sbjct: 146 ILALTNNKVAVVKYSLLGSILSNLLLVLGTSLF 178



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>Q976J5:ARGC_SULTO N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-aminoadipyl-|
           phosphate reductase - Sulfolobus tokodaii
          Length = 349

 Score = 31.6 bits (70), Expect = 5.4
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -3

Query: 603 LP*KRDLELQMVVLTLGVSFVDLEADFRTDDCVVNKI 493
           LP K  LE    +L +G+  +DL ADFR  D  + KI
Sbjct: 76  LPHKVSLEYVPKILEMGIQVIDLSADFRLKDPTLYKI 112



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>Q99385:VCX1_YEAST Vacuolar calcium ion transporter - Saccharomyces cerevisiae|
           (Baker's yeast)
          Length = 411

 Score = 31.2 bits (69), Expect = 7.1
 Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
 Frame = +2

Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLG-CVLF 388
           I A   G + +++ SMLGS+LSN +LVLG C +F
Sbjct: 111 IIALKKGQVRIVQASMLGSLLSNLLLVLGLCFIF 144



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>Q53R41:FAKD1_HUMAN FAST kinase domain-containing protein 1 - Homo sapiens (Human)|
          Length = 847

 Score = 31.2 bits (69), Expect = 7.1
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -1

Query: 443 DTPILCLLVSIRMGKTSMKKEHIQVLIYWIIQ 348
           D+  LC  +    GK++MKK H+++L Y +IQ
Sbjct: 783 DSKALCRNIPHMKGKSAMKKRHLEILGYRVIQ 814



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>Q93Z81:CAX3_ARATH Vacuolar cation/proton exchanger 3 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 459

 Score = 31.2 bits (69), Expect = 7.1
 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLF 388
           I A  N  + V++ S+LGS+LSN +LVLG  LF
Sbjct: 146 ILALANNKVAVVKYSLLGSILSNLLLVLGTSLF 178



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>Q5PBJ0:SYA_ANAMM Alanyl-tRNA synthetase - Anaplasma marginale (strain St. Maries)|
          Length = 882

 Score = 30.8 bits (68), Expect = 9.3
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +3

Query: 600 VVGIGVATTSTSIVGAKDDLKHLEEAEGRTGGGNKKLRLSL 722
           V+ IGV  T++ ++GA + +K L + +G+ GG     R+SL
Sbjct: 820 VLIIGVGDTASKVLGASELVKTLADLQGKGGGNAGLARVSL 860



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>Q5TKG3:CAX1B_ORYSJ Vacuolar cation/proton exchanger 1b - Oryza sativa subsp. japonica|
           (Rice)
          Length = 453

 Score = 30.8 bits (68), Expect = 9.3
 Identities = 17/33 (51%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 293 IYASDNGMIHVIRQSMLGSVLSN-ILVLGCVLF 388
           + A   G I V++ S+LGS+LSN +LVLG  LF
Sbjct: 145 LLALREGKIEVVKCSLLGSILSNLLLVLGTSLF 177


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 172,123,560
Number of extensions: 3606152
Number of successful extensions: 7952
Number of sequences better than 10.0: 14
Number of HSP's gapped: 7937
Number of HSP's successfully gapped: 15
Length of query: 339
Length of database: 100,686,439
Length adjustment: 114
Effective length of query: 225
Effective length of database: 69,416,809
Effective search space: 15618782025
Effective search space used: 15618782025
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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