ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf58c21 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os06g0172600:Os06g0172600 | 125 | 1e-29 | 2 | AK060583: | 124 | 4e-29 | 3 | Os03g0805600:Os03g0805600 | 32 | 0.14 | 4 | Os01g0595100:Os01g0595100 | 28 | 3.5 | 5 | AF140492:Os02g0461900 | 27 | 4.6 | 6 | AK072357:Os08g0379300 | 27 | 4.6 | 7 | Os04g0450300:Os04g0450300 | 27 | 5.9 | 8 | Os02g0671200:Os02g0671200 | 27 | 5.9 | 9 | AK111634:Os05g0114700 | 27 | 5.9 | 10 | AK105978:Os03g0849900 | 27 | 5.9 | 11 | AK104518:Os03g0849900 | 27 | 5.9 | 12 | AK099223:Os05g0114700 | 27 | 5.9 | 13 | AK071606:Os03g0849900 | 27 | 5.9 | 14 | AK062394:Os01g0124100 | 27 | 5.9 | 15 | Os02g0494700:Os02g0494700 | 27 | 7.8 | 16 | Os01g0133900:Os01g0133900 | 27 | 7.8 | 17 | AK104672:Os10g0418300 | 27 | 7.8 | 18 | AK099297:Os10g0418300 | 27 | 7.8 | 19 | AK061342:Os10g0418300 | 27 | 7.8 |
|---|
>Os06g0172600:Os06g0172600 | Length = 62 Score = 125 bits (314), Expect = 1e-29 Identities = 60/62 (96%), Positives = 62/62 (100%) Frame = +3 Query: 87 MGKVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 266 MGKVHGSLARAGKVRGQTPKVAKQDKKK+PRGRAHKR+QYNRRFVTAVVGFGKKRGPNSS Sbjct: 1 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 60 Query: 267 EK 272 EK Sbjct: 61 EK 62
>AK060583: | Length = 62 Score = 124 bits (310), Expect = 4e-29 Identities = 59/62 (95%), Positives = 61/62 (98%) Frame = +3 Query: 87 MGKVHGSLARAGKVRGQTPKVAKQDKKKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPNSS 266 MGKVHGSLARAGKVRGQTPKVAKQDKKK+PRGRAHKR+QYNRRFVTA VGFGKKRGPNSS Sbjct: 1 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAAVGFGKKRGPNSS 60 Query: 267 EK 272 EK Sbjct: 61 EK 62
>Os03g0805600:Os03g0805600 | Length = 558 Score = 32.3 bits (72), Expect = 0.14 Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 5/40 (12%) Frame = +1 Query: 4 LQPDAAAARAPSVHLADRSAAA-----PPPQQPWVRCTDR 108 L P A AR P++HL D +AAA PPP+ PW R R Sbjct: 8 LLPAARPAR-PALHLRDAAAAAAAARVPPPRLPWSRAVAR 46
>Os01g0595100:Os01g0595100 | Length = 837 Score = 27.7 bits (60), Expect = 3.5 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 3/63 (4%) Frame = +3 Query: 90 GKVHGSLARAGKVRGQTPKVAKQDK---KKQPRGRAHKRIQYNRRFVTAVVGFGKKRGPN 260 G HG AR GK RG + + +K RGR +R + + VVGF +K+ Sbjct: 243 GTGHG-FARGGKYRGYNEDINNNHQNRPQKVVRGRGPRRYEAVAKNNRDVVGFQRKQPAR 301 Query: 261 SSE 269 S E Sbjct: 302 SRE 304
>AF140492:Os02g0461900 | Length = 139 Score = 27.3 bits (59), Expect = 4.6 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -2 Query: 202 WMRLWARPRGCFFLSCFATLG 140 ++R W R GC F +C +LG Sbjct: 76 FVRSWGRKGGCLFFNCMESLG 96
>AK072357:Os08g0379300 | Length = 593 Score = 27.3 bits (59), Expect = 4.6 Identities = 16/32 (50%), Positives = 17/32 (53%) Frame = +1 Query: 16 AAAARAPSVHLADRSAAAPPPQQPWVRCTDRW 111 AA APS A RS A PP P V C+ RW Sbjct: 7 AAPTIAPSAAAACRSLAPMPPL-PAVSCSSRW 37
>Os04g0450300:Os04g0450300 | Length = 387 Score = 26.9 bits (58), Expect = 5.9 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 Query: 10 PDAAAARAPSVHLADRSAAAPPPQQP 87 P AAAA +PS + R +PPP P Sbjct: 188 PPAAAAASPSPERSPRCQPSPPPPPP 213
>Os02g0671200:Os02g0671200 | Length = 462 Score = 26.9 bits (58), Expect = 5.9 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = +1 Query: 49 ADRSAAAPPPQQPWV 93 A +AAAPPPQ PW+ Sbjct: 181 AGGAAAAPPPQPPWL 195
>AK111634:Os05g0114700 | Length = 231 Score = 26.9 bits (58), Expect = 5.9 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = +1 Query: 13 DAAAARAPSVHLADRSAAAPPPQQPWVRCTD--RWRV 117 D AAA A + D +A A PP W CTD WR+ Sbjct: 182 DIAAAEADT-SCYDAAAMASPPSPVWEFCTDYSLWRI 217
>AK105978:Os03g0849900 | Length = 408 Score = 26.9 bits (58), Expect = 5.9 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +1 Query: 85 PWVRCTDRWRVPGRC 129 PW + RW VPG+C Sbjct: 392 PWAKPNARWTVPGKC 406
>AK104518:Os03g0849900 | Length = 408 Score = 26.9 bits (58), Expect = 5.9 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +1 Query: 85 PWVRCTDRWRVPGRC 129 PW + RW VPG+C Sbjct: 392 PWAKPNARWTVPGKC 406
>AK099223:Os05g0114700 | Length = 231 Score = 26.9 bits (58), Expect = 5.9 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = +1 Query: 13 DAAAARAPSVHLADRSAAAPPPQQPWVRCTD--RWRV 117 D AAA A + D +A A PP W CTD WR+ Sbjct: 182 DIAAAEADT-SCYDAAAMASPPSPVWEFCTDYSLWRI 217
>AK071606:Os03g0849900 | Length = 408 Score = 26.9 bits (58), Expect = 5.9 Identities = 8/15 (53%), Positives = 10/15 (66%) Frame = +1 Query: 85 PWVRCTDRWRVPGRC 129 PW + RW VPG+C Sbjct: 392 PWAKPNARWTVPGKC 406
>AK062394:Os01g0124100 | Length = 259 Score = 26.9 bits (58), Expect = 5.9 Identities = 11/29 (37%), Positives = 14/29 (48%) Frame = +1 Query: 19 AAARAPSVHLADRSAAAPPPQQPWVRCTD 105 AAA ++ L A P P +PW C D Sbjct: 22 AAAHGDTIRLPSEGDAPPQPAKPWDCCDD 50
>Os02g0494700:Os02g0494700 | Length = 1648 Score = 26.6 bits (57), Expect = 7.8 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +3 Query: 123 KVRGQTPKVAKQDKKKQPRGRAHKRIQYN 209 K RG K A+ D+K + RGR K + N Sbjct: 699 KARGHPKKQAEPDEKPKARGRVRKTTEAN 727
>Os01g0133900:Os01g0133900 | Length = 797 Score = 26.6 bits (57), Expect = 7.8 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +1 Query: 10 PDAAAARAPSVHLADRSAAAPPPQQPW 90 P AAAAR+ R+ APPP +PW Sbjct: 642 PAAAAARSAGY----RAPEAPPPPRPW 664
>AK104672:Os10g0418300 | Length = 253 Score = 26.6 bits (57), Expect = 7.8 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 339 KATGEQANKQKRRGSARPAGSTTSPTSWG 253 +A GE+ +++RRG R AG S +SWG Sbjct: 192 EAGGER--RRRRRGHGREAGGRGSRSSWG 218
>AK099297:Os10g0418300 | Length = 252 Score = 26.6 bits (57), Expect = 7.8 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 339 KATGEQANKQKRRGSARPAGSTTSPTSWG 253 +A GE+ +++RRG R AG S +SWG Sbjct: 192 EAGGER--RRRRRGHGREAGGRGSRSSWG 218
>AK061342:Os10g0418300 | Length = 253 Score = 26.6 bits (57), Expect = 7.8 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 339 KATGEQANKQKRRGSARPAGSTTSPTSWG 253 +A GE+ +++RRG R AG S +SWG Sbjct: 192 EAGGER--RRRRRGHGREAGGRGSRSSWG 218 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 10,687,970 Number of extensions: 216917 Number of successful extensions: 1013 Number of sequences better than 10.0: 19 Number of HSP's gapped: 1010 Number of HSP's successfully gapped: 19 Length of query: 150 Length of database: 15,399,855 Length adjustment: 91 Effective length of query: 59 Effective length of database: 11,756,124 Effective search space: 693611316 Effective search space used: 693611316 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
