ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf54k19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q9NRA8:4ET_HUMAN Eukaryotic translation initiation factor 4E tra... 36 0.37
2P19274:VTPX_TTV1 Viral protein TPX - Thermoproteus tenax virus 1... 35 0.82
3Q8DSJ7:UPPS_STRMU Undecaprenyl pyrophosphate synthetase - Strept... 33 1.8
4Q9I310:Y1727_PSEAE Uncharacterized signaling protein PA1727 - Ps... 31 9.1

>Q9NRA8:4ET_HUMAN Eukaryotic translation initiation factor 4E transporter - Homo|
           sapiens (Human)
          Length = 985
 Score = 35.8 bits (81), Expect = 0.37
 Identities = 21/75 (28%), Positives = 37/75 (49%)
 Frame = +1

Query: 322 LAHLPEVKYADACAEVGEESERVGRWSPRRRSGSIYLAAGGPISMKARMEAASKAEELES 501
           +  LP  K   +C  + E+ +  G W P +   S+Y A+G           +S  E L+ 
Sbjct: 38  IKELPHSKQRPSC--LSEKYDSDGVWDPEKWHASLYPASG----------RSSPVESLKK 85

Query: 502 QLDPEFPSFMKRMLD 546
           +LD + PS ++R++D
Sbjct: 86  ELDTDRPSLVRRIVD 100



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>P19274:VTPX_TTV1 Viral protein TPX - Thermoproteus tenax virus 1 (strain KRA1) (TTV1)|
          Length = 360

 Score = 34.7 bits (78), Expect = 0.82
 Identities = 19/45 (42%), Positives = 23/45 (51%)
 Frame = -1

Query: 1015 PCPSPTYHLISR*IKLKPYPTPTYHLISR*IKLKPYPTPTYHLIY 881
            P P+PTY +      + P PTPT  L S      P PTPTY + Y
Sbjct: 286  PTPTPTYDITYVVFDVTPSPTPTPTLTS---TPTPTPTPTYDITY 327



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>Q8DSJ7:UPPS_STRMU Undecaprenyl pyrophosphate synthetase - Streptococcus mutans|
          Length = 249

 Score = 33.5 bits (75), Expect = 1.8
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
 Frame = +1

Query: 337 EVKYADACAEVGEESERVGRWSPRRRSGSIYLAAGGPISMKARMEAASKAEELESQLDPE 516
           ++K +   A +G   +  GRW+ +R    ++   G    M A  +    A EL  ++   
Sbjct: 10  DIKLSKIPAHIGIIMDGNGRWAKKRMKPRVF---GHKAGMDALQDVTIAASELGVKILTV 66

Query: 517 FPSFMKRMLDSHVVRGFWLGLPSHFCDTYLP---KNDCTITLVDEKDE 651
           +    +          F + LP  F D Y+P   KN+  I ++ +K+E
Sbjct: 67  YAFSTENWARPQEEVKFIMNLPVEFFDKYVPKLHKNNVRILVIGDKEE 114



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>Q9I310:Y1727_PSEAE Uncharacterized signaling protein PA1727 - Pseudomonas aeruginosa|
          Length = 685

 Score = 31.2 bits (69), Expect = 9.1
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -2

Query: 687 PLLVGKVFGLKLFIFLIHQSDGAVILWQVCVTEMAWQ 577
           P+ +G   GL L   L+     A  LW VC  E+ WQ
Sbjct: 69  PIPLGYDLGLTLLSLLLAVGSSAFALWLVCQAELPWQ 105


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 186,282,730
Number of extensions: 4100778
Number of successful extensions: 9604
Number of sequences better than 10.0: 4
Number of HSP's gapped: 9583
Number of HSP's successfully gapped: 4
Length of query: 406
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 290
Effective length of database: 68,868,219
Effective search space: 19971783510
Effective search space used: 19971783510
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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