ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf54i07 |
|---|---|
| Clone Library Name | barley_pub |
>Q8LGU7:RNZN_ARATH Nuclear ribonuclease Z - Arabidopsis thaliana (Mouse-ear cress)| Length = 280 Score = 414 bits (1064), Expect = e-115 Identities = 190/273 (69%), Positives = 236/273 (86%) Frame = +3 Query: 195 LEIEGYPVEGISIGGHETCVIFPTLSLAFDIGRCPQRAVSQDFLFISHAHLDHIGGLPMY 374 ++IEGYP+EG+SIGGHETC+IFP+L +AFDIGRCP RA+SQDFLFISH+H+DHIGGLPMY Sbjct: 7 MQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHIGGLPMY 66 Query: 375 VATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKV 554 VATRGLY+++PPTI VP + E VE LF+VHR +D SEL H L+ LD+GEE+ +R+DLKV Sbjct: 67 VATRGLYKMKPPTIIVPASIKETVESLFEVHRKLDSSELKHNLVGLDIGEEFIIRKDLKV 126 Query: 555 RAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLKLSGVEITNTVTTPEVAFTGDT 734 +AFKT+H I SQGYV+YS K KLK++Y+GL G+EIK LK+SGVEIT+++ TPEVAFTGDT Sbjct: 127 KAFKTFHVIQSQGYVVYSTKYKLKKEYIGLSGNEIKNLKVSGVEITDSIITPEVAFTGDT 186 Query: 735 MSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILL 914 SDF++D NAD LKAK+LVMESTFLDDSVS+EHAR+YGHIH+ EI N ++KFEN+AILL Sbjct: 187 TSDFVVDETNADALKAKVLVMESTFLDDSVSVEHARDYGHIHISEIVNHAEKFENKAILL 246 Query: 915 IHFSARYTTEEIDAGISRLPPSFLSRVYALKEG 1013 IHFSARYT +EI+ +S LPP RV+AL +G Sbjct: 247 IHFSARYTVKEIEDAVSALPPPLEGRVFALTQG 279
>P60193:RNZN_WHEAT Nuclear ribonuclease Z - Triticum aestivum (Wheat)| Length = 176 Score = 343 bits (879), Expect = 1e-93 Identities = 167/171 (97%), Positives = 170/171 (99%) Frame = +3 Query: 192 RLEIEGYPVEGISIGGHETCVIFPTLSLAFDIGRCPQRAVSQDFLFISHAHLDHIGGLPM 371 RLEIEGYPVEGISIGGHETCVIFPTLSLAFDIGRCPQRAV+QDFLFISHAHLDHIGGLPM Sbjct: 6 RLEIEGYPVEGISIGGHETCVIFPTLSLAFDIGRCPQRAVAQDFLFISHAHLDHIGGLPM 65 Query: 372 YVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLK 551 YVATRGLYRLRPPTIFVPKYL ELVERLFDVHRAMDQSELNHTL+PLD+GEEYELRRDLK Sbjct: 66 YVATRGLYRLRPPTIFVPKYLRELVERLFDVHRAMDQSELNHTLVPLDIGEEYELRRDLK 125 Query: 552 VRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLKLSGVEITNTVT 704 VRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLKLSGVEITNTVT Sbjct: 126 VRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLKLSGVEITNTVT 176
>Q8L633:RNZC_ARATH Ribonuclease Z, chloroplast precursor - Arabidopsis thaliana| (Mouse-ear cress) Length = 354 Score = 332 bits (852), Expect = 1e-90 Identities = 158/273 (57%), Positives = 203/273 (74%) Frame = +3 Query: 195 LEIEGYPVEGISIGGHETCVIFPTLSLAFDIGRCPQRAVSQDFLFISHAHLDHIGGLPMY 374 +E+E Y +EGIS+GGHETCVI P L FDIGRCP RA+ Q FLFI+HAHLDHIGGLPMY Sbjct: 76 VELESYAIEGISVGGHETCVIVPELKCVFDIGRCPSRAIQQKFLFITHAHLDHIGGLPMY 135 Query: 375 VATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKV 554 VA+RGLY L PP IFVP + E VE+L ++HR M Q ELN LIPL VGE YELR D+ V Sbjct: 136 VASRGLYNLEPPKIFVPPSIKEDVEKLLEIHRTMGQVELNVELIPLAVGETYELRNDIVV 195 Query: 555 RAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLKLSGVEITNTVTTPEVAFTGDT 734 R F T+H IPSQGYVIYSV++KL++ Y L G +I+++K SGVEIT+T+ +PE+AFTGDT Sbjct: 196 RPFATHHVIPSQGYVIYSVRKKLQKQYAHLKGKQIEKIKKSGVEITDTILSPEIAFTGDT 255 Query: 735 MSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILL 914 S+++LDP NAD L+AK+L+ E+TFLD+S S EHA+ GH H+ +I + ++ +LL Sbjct: 256 TSEYMLDPRNADALRAKVLITEATFLDESFSTEHAQALGHTHISQIIENAKWIRSKTVLL 315 Query: 915 IHFSARYTTEEIDAGISRLPPSFLSRVYALKEG 1013 HFS+RY EEI + +L ++V L EG Sbjct: 316 THFSSRYHVEEIREAVLKLQSKVSAKVIPLTEG 348
>Q973F1:RNZ_SULTO Ribonuclease Z - Sulfolobus tokodaii| Length = 293 Score = 78.2 bits (191), Expect = 6e-14 Identities = 64/221 (28%), Positives = 108/221 (48%), Gaps = 19/221 (8%) Frame = +3 Query: 330 ISHAHLDHIGGLPMYVATRGLYRLRPPTIFV-PKYLSELVERLFDVHRAMDQSELNHTLI 506 I+H H DH+ GLP + T G+Y + + + PK L E +E +F + + Sbjct: 58 ITHMHGDHVLGLPGMIETMGMYSRKESLLLMGPKELKEFLEDIF-------KKTYFYPNF 110 Query: 507 PLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLKL---- 674 + + ++YE ++K+ F+T HTI SQGY ++ K +LK D L IK ++ Sbjct: 111 EIQIIDKYE-DENIKISTFETCHTIESQGY-LFEEKDRLKIDIDKLRKEGIKDWRIIRML 168 Query: 675 ---SGVEITNTVTTPE----------VAFTGDT-MSDFILDPDNADVLKAKILVMESTFL 812 VEI V PE +A+TGDT + +++ V +L+ +STF+ Sbjct: 169 KEGKRVEINGKVLLPEDYLIVKKGIRIAYTGDTGPCEKVINA----VKDVDLLIHDSTFI 224 Query: 813 DDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARY 935 D+ + A +YGH + ++ A ++ K + + L H S RY Sbjct: 225 DE----KEAYKYGHSNSYDAAYVALKANVKRLALFHISPRY 261
>Q9HN60:RNZ_HALSA Ribonuclease Z - Halobacterium salinarium (Halobacterium halobium)| Length = 308 Score = 70.1 bits (170), Expect = 2e-11 Identities = 78/258 (30%), Positives = 115/258 (44%), Gaps = 29/258 (11%) Frame = +3 Query: 279 FDIGRCPQRAVSQ-------DFLFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYL 434 FD G QR + + +FI+H H DH+ GLP V T R P TI VP+ L Sbjct: 35 FDAGEATQRQMMRYKTGFGVSDVFITHGHGDHVFGLPGLVHTWDFNDRTDPLTIHVPRGL 94 Query: 435 SELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVK 614 +E L V A + G D +VRAF+T H+ S GY + Sbjct: 95 RGDIEDL--VFSAGGDVGYPVRITEATPGAVVRSHDDYEVRAFETAHSTASVGYALVEDD 152 Query: 615 Q-----KLKQDYLGLP-GSEIKRL-KLSGVEITN-TVTTPE-----------VAFTGDTM 737 + + + + LG+P G + L VE+ + TV +PE + +TGDT Sbjct: 153 RTGRFDRARAEELGVPVGPKFSTLHDGQPVELDDGTVVSPEQVVGDPRPGRTLVYTGDTR 212 Query: 738 SDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLI 917 DP + A +L+ ++TF +D + E A E GH E A+++ + +A+ L Sbjct: 213 PH---DPVVSAAEDADLLIHDATFAND--ASERAAETGHSTAGEAADVATEAGAKALALT 267 Query: 918 HFSARYT--TEEIDAGIS 965 H S+RY EI AG S Sbjct: 268 HVSSRYAGDASEISAGAS 285
>Q8Q032:RNZ_METMA Ribonuclease Z - Methanosarcina mazei (Methanosarcina frisia)| Length = 305 Score = 67.0 bits (162), Expect = 1e-10 Identities = 72/254 (28%), Positives = 114/254 (44%), Gaps = 30/254 (11%) Frame = +3 Query: 273 LAFDIGRCPQRAV--------SQDFLFISHAHLDHIGGLPMYVATRG-LYRLRPPTIFVP 425 L FD G Q+ + S +F+SH H DH G+P + T L R P TI+ P Sbjct: 32 LLFDCGEGTQQQMMRAKTGMMSLSSIFVSHFHADHFLGIPGLIQTMSFLGRKEPLTIYGP 91 Query: 426 KYLSELVERLFDVHRAMDQSELNHTL--IPLDVGEEYELRRDLKVRAFKTYHTIPSQGYV 599 + E E V + + L + + + L G+ E ++ VRA KT H+ PS GY Sbjct: 92 EGTKEFTE----VFKVLGYCNLKYEVRGVELSPGDIVE-GKNYVVRALKTEHSTPSLGYS 146 Query: 600 IYSVKQ-----KLKQDYLG-LPGSEIKRL-KLSGVEITNTVTTPE-----------VAFT 725 + + + K LG LPG +L K + VE+ + PE V ++ Sbjct: 147 LIENPRPGRFNREKAVELGVLPGPLFAKLQKGNPVEVNGKLVKPEEVVGAPRPGRTVVYS 206 Query: 726 GDTM-SDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENR 902 GDT + +L+ A +L+ + +F D+ A E H E+A+L+ + R Sbjct: 207 GDTRPCEAVLEASR----DADVLIHDGSFADEMAG--WAEESMHSTAGEVASLAKEAGVR 260 Query: 903 AILLIHFSARYTTE 944 ++L H S+RYT + Sbjct: 261 QLVLTHISSRYTDD 274
>Q4J9A4:RNZ_SULAC Ribonuclease Z - Sulfolobus acidocaldarius| Length = 292 Score = 66.2 bits (160), Expect = 2e-10 Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 22/228 (9%) Frame = +3 Query: 330 ISHAHLDHIGGLPMYVATRGLYRLRPPTIFV-PKYLSELVERLFDVHRAMDQSELNHTLI 506 ISH H DH+ GLP + T +Y + + + P L + ++ S HT Sbjct: 58 ISHLHGDHVLGLPGIIQTMAMYSRQQKLLLMGPTTLQDYLK-----------SSSKHTYF 106 Query: 507 P----LDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSV-KQKLKQDYLGLPGSE----I 659 + + YE ++L + F+T HTI S G++I K K+ + L G I Sbjct: 107 KPGFETEFIQSYE-DQNLTITTFRTCHTIESYGFLIKEKDKTKVDAERLKKEGITDWRII 165 Query: 660 KRLKLSG-VEITNTVTTPE----------VAFTGDTMS-DFILDPDNADVLKAKILVMES 803 ++LK VEI V PE +A+TGDT D +L+ + +L+ +S Sbjct: 166 RKLKEGKRVEIDTKVFLPEDYLYVKKGLSIAYTGDTAPCDSVLNA----IKGVDLLIHDS 221 Query: 804 TFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEE 947 TFL++ A +YGH + + A ++ K + + + L H S RY T E Sbjct: 222 TFLNE----REAHDYGHSNCTDAAEIASKADVKRLALYHISGRYQTTE 265
>Q8EQ58:RNZ_OCEIH Ribonuclease Z - Oceanobacillus iheyensis| Length = 306 Score = 66.2 bits (160), Expect = 2e-10 Identities = 71/257 (27%), Positives = 112/257 (43%), Gaps = 28/257 (10%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY--RLRPPTIFVPKYLSELVERLFDVHRAMDQSELNH 497 +FI+H H DHI GLP ++++R +P I+ P + E VE + Q+ L + Sbjct: 59 IFITHLHGDHIYGLPGFLSSRSFQSGENQPLCIYGPIGIKEFVESTL----RLSQTNLTY 114 Query: 498 TLIPLDVGEEYEL--RRDLKVRAFKTYHTIPSQGYVIYS-------VKQKLKQ------- 629 + ++ E+ L ++ V K H I S GY I + KLKQ Sbjct: 115 PITIKEITEDGNLFETNEMMVETKKLQHGIDSYGYRIKEKDKPGELLVDKLKQIGIAPGP 174 Query: 630 DYLGLPGSEIKRLKLSGVEITNTVTTPE-----VAFTGDTMSDFILDPDNADVLK-AKIL 791 Y + +EI L + N V P ++ GDT D+ +K + IL Sbjct: 175 IYQQIKENEITTLDNGSIIYRNDVLGPAKKGKVISILGDTRYSI----DHIPFIKFSDIL 230 Query: 792 VMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEIDAGISR- 968 V ESTF D + A EY H + A L+ + + L H S+RY E+ID+ I Sbjct: 231 VHESTFTQDKELL--AFEYNHSTNVQAAKLAKEANINKLYLTHVSSRYQAEDIDSIIEEA 288 Query: 969 ---LPPSFLSRVYALKE 1010 P ++L+ +++ E Sbjct: 289 RKIFPSTWLANDFSVYE 305
>Q97Z88:RNZ_SULSO Ribonuclease Z - Sulfolobus solfataricus| Length = 291 Score = 65.9 bits (159), Expect = 3e-10 Identities = 64/222 (28%), Positives = 106/222 (47%), Gaps = 20/222 (9%) Frame = +3 Query: 330 ISHAHLDHIGGLPMYVATRGLYRLRPPTIFV--PKYLSELVERLFDVHRAMDQSELNHTL 503 ISH H DH+ GL +A+ GL R T+++ P+ L + + + + + S+ N + Sbjct: 59 ISHMHGDHVFGLLGVIASMGLLD-RKETLYILGPRKLKDFL------YTSFEYSKFNPSF 111 Query: 504 IPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLKL--- 674 ++ + Y ++ + FKT HTI SQGY+I K ++K D L +I+ ++ Sbjct: 112 -KIEFIDNYN-DENITISTFKTCHTIESQGYLIME-KDRVKIDEEKLEKEKIRDWRVIRK 168 Query: 675 ----SGVEITNTVTTPE----------VAFTGDTM-SDFILDPDNADVLKAKILVMESTF 809 VE + PE VA+TGDTM ++D V IL+ +STF Sbjct: 169 LKEGKTVEYNGKLLKPEDYLVIKRGSKVAYTGDTMPCQSVVD----SVKGVDILIHDSTF 224 Query: 810 LDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARY 935 LD+ A YGH ++ + A ++ + + + L H S RY Sbjct: 225 LDE----PSAYTYGHSNVTDAAKIALEASVKLLALTHISPRY 262
>Q6LYT2:RNZ_METMP Ribonuclease Z - Methanococcus maripaludis| Length = 308 Score = 65.9 bits (159), Expect = 3e-10 Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 35/254 (13%) Frame = +3 Query: 279 FDIGRCPQRAV--------SQDFLFISHAHLDHIGGLP---MYVATRGLYRLRPPTIFVP 425 FD G QR + + +FI+H H DH+ GLP +A +G R +P I+ P Sbjct: 33 FDCGENTQRQIIFTDVSPMKINNIFITHLHGDHVLGLPGLLQSIAFQG--RKKPLNIYGP 90 Query: 426 KYLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIY 605 +++E + V +N I E + +V ++ H++P+ YV Sbjct: 91 AETVKMIEHILGVGYHSIDYPINVHEISSKTPERIIFTNNYEVFSYPVVHSVPALAYVFK 150 Query: 606 SVK------QKLKQDYLGLP-GSEIKRLK------LSGVEIT-NTVTTPE-----VAFTG 728 VK +K+K+ LG+ G ++KRLK L+G IT N VT P V ++G Sbjct: 151 QVKKPRMDLEKVKK--LGIEIGPDLKRLKDGFNVELNGEIITLNDVTLPPKKGICVGYSG 208 Query: 729 DTM-----SDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKF 893 DT+ ++F+ + LK L+ E+TF D +A+E H + N++ Sbjct: 209 DTIPLKEFAEFLKE------LKCNTLIHEATF--DKTMERNAKETLHSTATDALNIAKLS 260 Query: 894 ENRAILLIHFSARY 935 +LL H SARY Sbjct: 261 GVSTVLLTHISARY 274
>Q58897:RNZ_METJA Ribonuclease Z - Methanococcus jannaschii| Length = 317 Score = 65.5 bits (158), Expect = 4e-10 Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 26/234 (11%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERLFDVHRAMDQSELN-- 494 +FI+H H DHI G+P + + G + R + IF P+ E++E + + + Sbjct: 59 IFITHLHGDHILGIPGLLQSMGFFGREKELKIFGPEGTKEIIENSLKLGTHYIEFPIKVY 118 Query: 495 --HTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKL----KQDYLGLP-GS 653 +T P+ + +E + ++ A+ T H IPS Y+ +K+ K LG+ G Sbjct: 119 EIYTKEPITIYKE----ENYEIIAYPTEHGIPSYAYIFKEIKKPRLDIEKAKKLGVKIGP 174 Query: 654 EIKRLKLSGVEITNT---VTTPE-----------VAFTGDTM--SDFILDPDNADVLKAK 785 ++K+LK +G + N + PE +A++GDT+ DF L Sbjct: 175 DLKKLK-NGEAVKNIYGEIIKPEYVLLPPKKGFCLAYSGDTLPLEDF---GKYLKELGCD 230 Query: 786 ILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEE 947 +L+ E+TF DDS + A+E H + + N++ +A++L H SARY EE Sbjct: 231 VLIHEATF-DDSAK-DAAKENMHSTIGDAVNIAKLANVKALILTHISARYDKEE 282
>P60197:RNZ_STAAN Ribonuclease Z - Staphylococcus aureus (strain N315)| Length = 306 Score = 64.3 bits (155), Expect = 9e-10 Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 34/259 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQD--------FLFISHAHLDHIGGLPMYVATRGLY--RLRPPTIFVPK 428 FD+G Q + +FI+H H DHI GLP +++R +P T+ PK Sbjct: 36 FDVGEGTQHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPK 95 Query: 429 YLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD-LKVRAFKTYHTIPSQGYVIY 605 + VE + + +S LN+ + +++ + D V A H IPS GY + Sbjct: 96 GIKAYVEMSMN----LSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVM 151 Query: 606 SVK-------QKLKQDYLGL-PGSEIKRLKLSGVEITN------------TVTTPEVAFT 725 + + + LK +GL PG + + +K N + P VA Sbjct: 152 APETTGTINVEALKN--IGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIF 209 Query: 726 GDTM---SDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFE 896 GDT ++ ++ D A ++V E+T++D + A Y H H+ ++ L + Sbjct: 210 GDTKPCSNERVISRD------ADVMVHEATYIDGEKHL--ANNYHHSHIEDVFALIKEAN 261 Query: 897 NRAILLIHFSARYTTEEID 953 + L+ H S RY TE+I+ Sbjct: 262 VKRTLITHLSNRYNTEDIN 280
>P60196:RNZ_STAAM Ribonuclease Z - Staphylococcus aureus (strain Mu50 / ATCC 700699)| Length = 306 Score = 64.3 bits (155), Expect = 9e-10 Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 34/259 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQD--------FLFISHAHLDHIGGLPMYVATRGLY--RLRPPTIFVPK 428 FD+G Q + +FI+H H DHI GLP +++R +P T+ PK Sbjct: 36 FDVGEGTQHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPK 95 Query: 429 YLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD-LKVRAFKTYHTIPSQGYVIY 605 + VE + + +S LN+ + +++ + D V A H IPS GY + Sbjct: 96 GIKAYVEMSMN----LSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVM 151 Query: 606 SVK-------QKLKQDYLGL-PGSEIKRLKLSGVEITN------------TVTTPEVAFT 725 + + + LK +GL PG + + +K N + P VA Sbjct: 152 APETTGTINVEALKN--IGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIF 209 Query: 726 GDTM---SDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFE 896 GDT ++ ++ D A ++V E+T++D + A Y H H+ ++ L + Sbjct: 210 GDTKPCSNERVISRD------ADVMVHEATYIDGEKHL--ANNYHHSHIEDVFALIKEAN 261 Query: 897 NRAILLIHFSARYTTEEID 953 + L+ H S RY TE+I+ Sbjct: 262 VKRTLITHLSNRYNTEDIN 280
>Q5HFR8:RNZ_STAAC Ribonuclease Z - Staphylococcus aureus (strain COL)| Length = 306 Score = 64.3 bits (155), Expect = 9e-10 Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 34/259 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQD--------FLFISHAHLDHIGGLPMYVATRGLY--RLRPPTIFVPK 428 FD+G Q + +FI+H H DHI GLP +++R +P T+ PK Sbjct: 36 FDVGEGTQHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPK 95 Query: 429 YLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD-LKVRAFKTYHTIPSQGYVIY 605 + VE + + +S LN+ + +++ + D V A H IPS GY + Sbjct: 96 GIKAYVEMSMN----LSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVM 151 Query: 606 SVK-------QKLKQDYLGL-PGSEIKRLKLSGVEITN------------TVTTPEVAFT 725 + + + LK +GL PG + + +K N + P VA Sbjct: 152 APETTGTINVEALKN--IGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIF 209 Query: 726 GDTM---SDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFE 896 GDT ++ ++ D A ++V E+T++D + A Y H H+ ++ L + Sbjct: 210 GDTKPCSNERVISRD------ADVMVHEATYIDGEKHL--ANNYHHSHIEDVFALIKEAN 261 Query: 897 NRAILLIHFSARYTTEEID 953 + L+ H S RY TE+I+ Sbjct: 262 VKRTLITHLSNRYNTEDIN 280
>Q8NWE6:RNZ_STAAW Ribonuclease Z - Staphylococcus aureus (strain MW2)| Length = 306 Score = 63.9 bits (154), Expect = 1e-09 Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 34/259 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQD--------FLFISHAHLDHIGGLPMYVATRGLY--RLRPPTIFVPK 428 FD+G Q + +FI+H H DHI GLP +++R +P T+ PK Sbjct: 36 FDVGEGTQHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPK 95 Query: 429 YLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD-LKVRAFKTYHTIPSQGYVIY 605 + VE + + +S LN+ + +++ + D V A H +PS GY + Sbjct: 96 GIKAYVEMSMN----LSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGVPSYGYRVM 151 Query: 606 SVK-------QKLKQDYLGL-PGSEIKRLKLSGVEITN------------TVTTPEVAFT 725 + + + LK +GL PG + + +K N + P VA Sbjct: 152 APETTGTINVEALKN--IGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIF 209 Query: 726 GDTM---SDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFE 896 GDT ++ ++ D A ++V E+T++D + A Y H H+ ++ L + Sbjct: 210 GDTKPCSNERVISRD------ADVMVHEATYIDGEKHL--ANNYHHSHIEDVFALIKEAN 261 Query: 897 NRAILLIHFSARYTTEEID 953 + L+ H S RY TE+I+ Sbjct: 262 VKRTLITHLSNRYNTEDIN 280
>Q6G960:RNZ_STAAS Ribonuclease Z - Staphylococcus aureus (strain MSSA476)| Length = 306 Score = 63.9 bits (154), Expect = 1e-09 Identities = 65/259 (25%), Positives = 112/259 (43%), Gaps = 34/259 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQD--------FLFISHAHLDHIGGLPMYVATRGLY--RLRPPTIFVPK 428 FD+G Q + +FI+H H DHI GLP +++R +P T+ PK Sbjct: 36 FDVGEGTQHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPK 95 Query: 429 YLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD-LKVRAFKTYHTIPSQGYVIY 605 + VE + + +S LN+ + +++ + D V A H +PS GY + Sbjct: 96 GIKAYVEMSMN----LSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGVPSYGYRVM 151 Query: 606 SVK-------QKLKQDYLGL-PGSEIKRLKLSGVEITN------------TVTTPEVAFT 725 + + + LK +GL PG + + +K N + P VA Sbjct: 152 APETTGTINVEALKN--IGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIF 209 Query: 726 GDTM---SDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFE 896 GDT ++ ++ D A ++V E+T++D + A Y H H+ ++ L + Sbjct: 210 GDTKPCSNERVISRD------ADVMVHEATYIDGEKHL--ANNYHHSHIEDVFALIKEAN 261 Query: 897 NRAILLIHFSARYTTEEID 953 + L+ H S RY TE+I+ Sbjct: 262 VKRTLITHLSNRYNTEDIN 280
>Q6GGJ4:RNZ_STAAR Ribonuclease Z - Staphylococcus aureus (strain MRSA252)| Length = 306 Score = 63.9 bits (154), Expect = 1e-09 Identities = 66/259 (25%), Positives = 112/259 (43%), Gaps = 34/259 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQD--------FLFISHAHLDHIGGLPMYVATRGLY--RLRPPTIFVPK 428 FD+G Q + +FI+H H DHI GLP +++R +P T+ PK Sbjct: 36 FDVGEGTQHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPK 95 Query: 429 YLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD-LKVRAFKTYHTIPSQGYVIY 605 + VE + + +S LN+ + +++ + D V A H IPS GY + Sbjct: 96 GIKAYVEMSMN----LSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVM 151 Query: 606 SVK-------QKLKQDYLGL-PGSEIKRLKLSGVEITN------------TVTTPEVAFT 725 + + + LK +GL PG + + +K N + P VA Sbjct: 152 APETTGTINVEALKN--IGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPIVAIF 209 Query: 726 GDTM---SDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFE 896 GDT ++ ++ D A ++V E+T++D + A Y H H+ ++ L + Sbjct: 210 GDTKPCSNERVISRD------ADVMVHEATYIDGEKHL--ANNYHHSHIEDVFALIKEAN 261 Query: 897 NRAILLIHFSARYTTEEID 953 + L+ H S RY TE+I+ Sbjct: 262 VKRTLITHLSNRYNTEDIN 280
>O07896:RNZ_TREPA Ribonuclease Z - Treponema pallidum| Length = 310 Score = 58.5 bits (140), Expect = 5e-08 Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 26/235 (11%) Frame = +3 Query: 324 LFISHAHLDHIGGLP-MYVATRGLYRLRPPTIFVPKYLSELVE---RLFDVHRAMDQSEL 491 +FISH H DHI GLP + + + + R P I P +E VE R+ D++ + Sbjct: 60 IFISHTHADHITGLPGLLMLSSQVARSEPLYIIGPPRTAEYVETSRRILDMY-------I 112 Query: 492 NHTLIPLDVGEEYELRR--DLKVRAFKTYHTIPSQGYVIY------SVKQKLKQDYLGLP 647 N+ +I +V E + R D +VR F HT P GY + S + QD L +P Sbjct: 113 NYEIIVKEVIEPQVVYRGKDFQVRCFCLDHTKPCMGYTLEEQDRPGSFDPRAAQD-LHVP 171 Query: 648 GSEIKRLKLSGVEITN---TVTTPE-----------VAFTGDTMSDFILDPDNADVLKAK 785 + SGV + + PE V+F DT L A+V + Sbjct: 172 CGALWSQLQSGVAVQSAQGVTVYPEQVMGPARPGRKVSFVTDTK---YLQSIAAEVRNSD 228 Query: 786 ILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEI 950 V E F + + A E H+ + A ++ R + LIH+S RYT E+ Sbjct: 229 FFVCEGMF--EKGMEKDAAEKKHMTCVQAATIARDARVRLMALIHYSPRYTDHEL 281
>Q8CSG7:RNZ_STAES Ribonuclease Z - Staphylococcus epidermidis (strain ATCC 12228)| Length = 306 Score = 58.5 bits (140), Expect = 5e-08 Identities = 60/253 (23%), Positives = 109/253 (43%), Gaps = 29/253 (11%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLY--RLRPPTIFVPK 428 FD+G Q + + D +FI+H H DHI GLP + +R +P TI PK Sbjct: 36 FDVGEGTQHQILRHSIKLGKIDHIFITHMHGDHIFGLPGLLTSRSFQGGENKPLTIIGPK 95 Query: 429 YLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD-LKVRAFKTYHTIPSQGYVIY 605 + +E + +S LN+ + +++ ++ + V+A H IPS GY I Sbjct: 96 GIQNYIETSLQ----LSESHLNYPITYIEINQQLAYHHNGFTVQAEMLNHGIPSFGYRIE 151 Query: 606 S--VKQKLKQDYL---GL-PGSEIKRLKLSGV-EITNTVTT-----------PEVAFTGD 731 + + + + L GL PG + + +KL E + P ++ GD Sbjct: 152 APIMPGTINVEALRGIGLEPGPKYQEVKLQETFEYKGLIYNSDDFKGKAKPGPIISIFGD 211 Query: 732 TMSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAIL 911 T + + + +++ E+T+++ + A Y H H+ ++ NL + L Sbjct: 212 TKP---CENEYELAKNSDLMIHEATYIEGDKKL--ANNYHHSHIDDVFNLIKQANVNKSL 266 Query: 912 LIHFSARYTTEEI 950 + H S RY +E+ Sbjct: 267 ITHISNRYNIDEV 279
>Q5HP47:RNZ_STAEQ Ribonuclease Z - Staphylococcus epidermidis (strain ATCC 35984 /| RP62A) Length = 306 Score = 58.2 bits (139), Expect = 7e-08 Identities = 60/253 (23%), Positives = 108/253 (42%), Gaps = 29/253 (11%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLY--RLRPPTIFVPK 428 FD+G Q + + D +FI+H H DHI GLP + +R +P TI PK Sbjct: 36 FDVGEGTQHQILRHSIKLGKIDHIFITHMHGDHIFGLPGLLTSRSFQGGENKPLTIIGPK 95 Query: 429 YLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD-LKVRAFKTYHTIPSQGYVIY 605 + +E + +S LN+ + +++ ++ + V+A H IPS GY I Sbjct: 96 GIQNYIETSLQ----LSESHLNYPITYIEINQQLAYHHNGFTVQAEMLNHGIPSFGYRIE 151 Query: 606 S--VKQKLKQDYL---GL-PGSEIKRLKLSGV-EITNTVTT-----------PEVAFTGD 731 + + + L GL PG + + +KL E + P ++ GD Sbjct: 152 APITPGTINVEALRGIGLEPGPKYQEVKLQETFEYKGLIYNSDDFKGKAKPGPIISIFGD 211 Query: 732 TMSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAIL 911 T + + + +++ E+T+++ + A Y H H+ ++ NL + L Sbjct: 212 TKP---CENEYELAKNSDLMIHEATYIEGDKKL--ANNYHHSHIDDVFNLIKQANVNKSL 266 Query: 912 LIHFSARYTTEEI 950 + H S RY +E+ Sbjct: 267 ITHISNRYNIDEV 279
>Q8TLK5:RNZ_METAC Ribonuclease Z - Methanosarcina acetivorans| Length = 305 Score = 57.8 bits (138), Expect = 9e-08 Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 22/234 (9%) Frame = +3 Query: 309 VSQDFLFISHAHLDHIGGLPMYVATRG-LYRLRPPTIFVPKYLSELVERLFDVHRAMDQS 485 +S +F+SH H DH G+P + T + R P I+ P E E + +A+ Sbjct: 52 MSLSSIFVSHFHADHFLGIPGLIQTMSFMGRKDPLMIYGPAGTREFTE----LFKALGYF 107 Query: 486 ELNHTL--IPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQ-----KLKQDYLGL 644 L + + + L G+ E VRA +T H+ PS GY + + + K LG+ Sbjct: 108 NLKYEIHGMELKPGDVVE-GEGYVVRALETEHSTPSLGYALIENPRPGRFNREKAVALGV 166 Query: 645 PGSEI--KRLKLSGVEITNTVTTPE-----------VAFTGDTM-SDFILDPDNADVLKA 782 P + K K + VE V PE + ++GDT + +L+ A Sbjct: 167 PPGPLFSKLQKGNPVEAGGKVVRPEEVMGTPRPGRTIVYSGDTRPCEAVLEASR----DA 222 Query: 783 KILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTE 944 +L+ + +F D+ E A E H E+A L+ + R ++L H S+RYT + Sbjct: 223 DLLIHDGSFADEMA--EWAEESMHSTAGEVAALAKEAGVRKLVLTHISSRYTDD 274
>O29323:RNZ_ARCFU Ribonuclease Z - Archaeoglobus fulgidus| Length = 306 Score = 57.4 bits (137), Expect = 1e-07 Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 32/256 (12%) Frame = +3 Query: 273 LAFDIGRCPQRAV--------SQDFLFISHAHLDHIGGLPMYVATRGL-YRLRPPTIFVP 425 + FD G QR + + D +FI+H H DH GL + T L R R ++ P Sbjct: 33 MLFDCGEGTQRQMMIAKTGFRNLDNIFITHLHTDHFIGLFGLIETMSLNERSRELNVYSP 92 Query: 426 KYLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD-LKVRAFKTYHTIPSQGYVI 602 + +E++ LF+ A +LN+ + ++ + E++ D KV AF+T H + S GY I Sbjct: 93 R--AEVLRALFE---AFGYDQLNYDIRVRELKDGEEVKFDGFKVVAFRTEHIVKSVGYAI 147 Query: 603 YSVKQKLK------QDYLGLPGSEIKRLKLSGVEIT---NTVTTP----------EVAFT 725 ++ K + LG+P + G I T+T +V +T Sbjct: 148 IENDRRGKFNREKAEKELGIPPGPLYAKLARGESIVWKGRTITPDMVLGEKRRGRKVVYT 207 Query: 726 GDTMSDFILDPDNADV---LKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFE 896 GD+ P V A IL+ +++F ++ + A E GH E A ++ + Sbjct: 208 GDSR------PTKRTVEIARNADILIHDASFKEELK--DWAIESGHSTAKEAAEVAREAN 259 Query: 897 NRAILLIHFSARYTTE 944 + ++L H S RY+ + Sbjct: 260 VKKLILTHISTRYSKD 275
>Q88FQ4:RNZ_PSEPK Ribonuclease Z - Pseudomonas putida (strain KT2440)| Length = 319 Score = 57.0 bits (136), Expect = 1e-07 Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 21/228 (9%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHT 500 +FI+H H DH GLP +A+ G+ R +P + +P L + V + EL Sbjct: 58 IFITHVHGDHCFGLPGLLASAGMSGRTQPLEVILPAVLHDWVRQGLVASDTFLPFELR-- 115 Query: 501 LIPLDVGEEYELRRD-LKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLKLS 677 L+P++ E R + L+V + H +PS G+V + + + D L I R L Sbjct: 116 LLPVE--ELIAWRSETLQVTTVQLSHRVPSVGFVFTEINPEPRLDIQRLDAEGITRGPLW 173 Query: 678 GVEITNTVTTPEVAFTGDTM--SDFIL------------DPDNADVLK-----AKILVME 800 G E+ +T V + G + +D++ D D ++L A +LV E Sbjct: 174 G-ELAKGLT---VTYDGQLLNGNDYLRPSRPPRRVIVCGDNDKPELLAAVARGADVLVHE 229 Query: 801 STFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTE 944 +TF +V +GH E+A ++ R ++L HFSARY + Sbjct: 230 ATF-TQAVVERTGGTFGHSTAAEVARFAEAAGVRNLVLTHFSARYQND 276
>Q89NF8:RNZ_BRAJA Ribonuclease Z - Bradyrhizobium japonicum| Length = 301 Score = 56.2 bits (134), Expect = 3e-07 Identities = 69/245 (28%), Positives = 108/245 (44%), Gaps = 17/245 (6%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVATRGLYRLRPP-TIFVPKYLSELVERLFDVHRAMDQSELN 494 D + ++HAHLDH+ G+P +T GL + TI ++V R+ ++ + Sbjct: 55 DRILLTHAHLDHVLGIPGLFSTLGLRQSSDVMTIHGGPGTLDIVIRMLAGLWGAGRAPIP 114 Query: 495 HTLIPLDVGEEYELRRDLKVRAFKTYHT-IPSQGYVIYS-VKQKLKQDYL---GLPGSEI 659 L G+ + + F H S G+V S ++ L D L G+P + Sbjct: 115 VEFAALSEGQVIDAG-GFTIDCFPVRHRDTDSFGFVFQSPARRHLLPDRLASLGVPDGPL 173 Query: 660 KRLKLSG----VEITNTVTTPEVA--FTGDTMSDFILDPDNAD-----VLKAKILVMEST 806 + G +E T+ +V TG I D + + V A +LV+E+T Sbjct: 174 RGELAQGRPVVIEDGRTIDPEDVLGPATGGRKLVVIGDTETTEGLSQYVADADMLVIEAT 233 Query: 807 FLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEIDAGISRLPPSFL 986 FLD SI AR+YGH+ E A + ++L H S RY EEI A +R+ P+ Sbjct: 234 FLDRDASI--ARDYGHLTAAEAAAFAAANNVGQLVLTHMSGRYEDEEILAEAARIFPN-- 289 Query: 987 SRVYA 1001 SR+ A Sbjct: 290 SRIAA 294
>O58883:RNZ_PYRHO Ribonuclease Z - Pyrococcus horikoshii| Length = 307 Score = 55.1 bits (131), Expect = 6e-07 Identities = 67/258 (25%), Positives = 118/258 (45%), Gaps = 35/258 (13%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPT-IFVPKYLSELVERLFD-----------VH 467 +FI+H H DH GLP + T L++ + P I+ P+ S ++ L + VH Sbjct: 57 VFITHFHGDHYLGLPALIQTMSLWKRKDPLHIYGPEGSSTFLQNLLNSGYFAPSFDILVH 116 Query: 468 RAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVI--------YSVKQKL 623 +S L +EYE V AF+ H +P+ GYV +++K K+ Sbjct: 117 EISGKSRLKF--------KEYE------VWAFEVSHGVPALGYVFKEKDKRGNFNLK-KI 161 Query: 624 KQDYLGL-PGSEIKRLKLSGVEITN-------TVTTP-----EVAFTGDT-MSDFILDPD 761 K+ LGL PG +K L+ + N VT P +V ++GDT D +++ Sbjct: 162 KE--LGLEPGPWMKELERQKIIEINGKIVRLLEVTGPKKRGAKVVYSGDTEPCDEVIEFS 219 Query: 762 NADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTT 941 + +L+ E+T++++ E ++ H + E + K + R ++L H S RY+ Sbjct: 220 R----RGTLLIHEATYVNE----EDRKDSYHTTIEEACEIWKKSKARKLVLFHRSPRYSF 271 Query: 942 EEI-DAGISRLPPSFLSR 992 +E + +S P + + R Sbjct: 272 KEYKEKALSICPQAIIPR 289
>Q9UZP4:RNZ_PYRAB Ribonuclease Z - Pyrococcus abyssi| Length = 307 Score = 54.7 bits (130), Expect = 7e-07 Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 22/240 (9%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPT-IFVPKYLSELVERLFDVHRAMDQSELNHT 500 +FI+H H DH GLP + T L++ + P I+ P+ E ++ L + ++ Sbjct: 57 IFITHFHGDHYLGLPALIQTMNLWKRKEPLHIYGPENSIEFIKNLLNSGYFAPSFDVTVH 116 Query: 501 LIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDY-----LGL-PGSEIK 662 +P ++E +V AF+ H +P+ GYV ++ D LGL PG +K Sbjct: 117 ELPGKARLQFE---KYEVWAFEVSHGVPALGYVFKEKDRRGSFDLEKIKNLGLEPGPWMK 173 Query: 663 RLK------LSGVEI-TNTVTTP-----EVAFTGDTMSDFILDPDNADV---LKAKILVM 797 L+ + G I + VT P ++ +TGDT +P + +A +L+ Sbjct: 174 ELEEKKVINIGGRTIRLSEVTGPKKRGAKIVYTGDT------EPCENVIQFSRRANLLIH 227 Query: 798 ESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEIDAGISRLPP 977 E+T+L+ E E H + E + K + + L H RY+ +E G ++L P Sbjct: 228 EATYLNS----EDRGESYHTTVEEACEIWKKSKAFNLALFHRGPRYSFKEYKEGATKLCP 283
>Q5JE70:RNZ_PYRKO Ribonuclease Z - Pyrococcus kodakaraensis (Thermococcus| kodakaraensis) Length = 314 Score = 54.3 bits (129), Expect = 1e-06 Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 32/242 (13%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERL---------FDVH 467 D +FI+H H DH G+P + T L+ R +P I+ PKY + V+ L FD+H Sbjct: 55 DKIFITHFHGDHYLGIPALIQTMNLWDRQKPLHIYGPKYTFQFVQNLLNSGFFRPGFDIH 114 Query: 468 RAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYS-------VKQKLK 626 EL T + D ++ +FK H IP+ GYV +K+KL+ Sbjct: 115 ----VHELGETRLKFG---------DYEIWSFKVEHGIPALGYVFKEKDRRGKFLKEKLR 161 Query: 627 QDYLGLPGSEIKRLKLSG-------VEITNTVTTP-----EVAFTGDTMSDFILDPDNAD 770 +Y G + +L+ G + VT P ++ +TGDT +P Sbjct: 162 -EYGLEEGPILGKLEREGKIEWNGRIIRLEDVTGPRRKGLKIVYTGDT------EPCERV 214 Query: 771 VL---KAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTT 941 L +A +L+ E+T+L+ + Y H + E + + + + + + L H + RY+ Sbjct: 215 KLFSERADLLIHEATYLNPG---DRGDSY-HSTVEEACDTARRAKVKLLALFHRAFRYSY 270 Query: 942 EE 947 E+ Sbjct: 271 ED 272
>Q834G2:RNZ_ENTFA Ribonuclease Z - Enterococcus faecalis (Streptococcus faecalis)| Length = 313 Score = 54.3 bits (129), Expect = 1e-06 Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 24/232 (10%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHT 500 +FI+H H DHI GLP +++R P I+ P +++ V+ V QS L++ Sbjct: 59 IFITHLHGDHIFGLPGLLSSRSFQGGTEPLEIYGPVGIADFVKTSLRV----SQSRLSYP 114 Query: 501 LIPLDVGEEYEL---RRDLKVRAFKTYHTIPSQGYVIYSVK-----QKLKQDYLGLPG-- 650 L +++ +E ++ + VR H I S GY I Q K LG+P Sbjct: 115 LKFIELTKENDVIFKDKQFTVRCNILDHGITSFGYRIEEAAHEGELQVEKLQALGIPSGP 174 Query: 651 --SEIKR---LKLSGVEITNTVTTPE------VAFTGDTMSDFILDPDNADVL--KAKIL 791 ++KR + G EI E V GDT N+ L +A +L Sbjct: 175 LYGKLKRGETIVFDGQEINGQAFVGERKPGRIVTILGDTRK-----TKNSVTLARRADVL 229 Query: 792 VMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEE 947 V ESTF + + A+ Y H + A ++ + + + ++L H SARY T+E Sbjct: 230 VHESTF--NKHEAKMAKAYFHSTSQQAAEVAKEAQVKQLILTHISARYLTKE 279
>Q8ZTJ7:RNZ_PYRAE Ribonuclease Z - Pyrobaculum aerophilum| Length = 287 Score = 53.5 bits (127), Expect = 2e-06 Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 22/247 (8%) Frame = +3 Query: 312 SQDFLFISHAHLDHIGGLPMYVATRGLY--RLRPPTIFVPKYLSELVERLFDVHRAMDQS 485 S + ++H H DHI GLP V T RL+ + PK +H A+ + Sbjct: 56 SLTLIAVTHMHEDHILGLPGLVITSKFLGGRLK---VLAPK----------SMHGALSK- 101 Query: 486 ELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVI-YSVKQKLKQDYL-GLPGSEI 659 + ++V + YE R K++ + HT+ + G++I + V KL GLP + Sbjct: 102 ------LGVEVADSYEEER-FKIKCVEVCHTVDACGWLIQWDVGYKLDLSKTSGLPKWAL 154 Query: 660 KRL-KLSGVEITNTVTTPE------------VAFTGDTMSDFILDPDN-ADVLKAKILVM 797 L K V+I + + TPE + +TGDT P+ V +L+ Sbjct: 155 TELIKGKPVKIGDRIITPEEVADPAHKRFKYLLYTGDTAPC----PEMWKKVGSVDVLIH 210 Query: 798 ESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTE----EIDAGIS 965 E+TF DD VS A E GH + + + + ++L H SARY + E+ + IS Sbjct: 211 EATFADD-VSPSKAHEEGHSTVADAIEAARALNAQVLILTHVSARYPDKSRHRELASRIS 269 Query: 966 RLPPSFL 986 PP ++ Sbjct: 270 --PPPYI 274
>Q5UZJ9:RNZ_HALMA Ribonuclease Z - Haloarcula marismortui (Halobacterium marismortui)| Length = 311 Score = 53.5 bits (127), Expect = 2e-06 Identities = 64/275 (23%), Positives = 112/275 (40%), Gaps = 27/275 (9%) Frame = +3 Query: 273 LAFDIGRCPQRAVSQ-------DFLFISHAHLDHIGGLPMYVATRGL-YRLRPPTIFVPK 428 L FD G QR + + D LF++H H DH+ G+P + T R R I P Sbjct: 33 LLFDCGEGTQRQMMRYGTGFAIDHLFVTHLHGDHVLGIPGLLQTWDFNERERAIAIHTPA 92 Query: 429 YLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYS 608 +++L + + + + G+ R + ++RA +T H S GYV+ Sbjct: 93 GTRGNIKQLIQANGTTPSFPVR--INEVSAGDVVLDRSEYEIRAIETAHRCASVGYVLDE 150 Query: 609 -------VKQKLKQDYLGLPGSEIKRL-KLSGVEITNTVTTPEV-----------AFTGD 731 ++K ++++ PG + +L + VE PE +TGD Sbjct: 151 DDRKGKFDREKAEEEFGIPPGPKYSKLHRGEAVEHEGETIQPEAVVGPARPGRRFVYTGD 210 Query: 732 TMSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAIL 911 T+ + + D A +LV ++TF +D E A+ H E A+++ + + Sbjct: 211 TLPTESVIEASED---ADLLVHDATFAEDRK--ERAKATAHSTAREAADVARQAGASTLA 265 Query: 912 LIHFSARYTTEEIDAGISRLPPSFLSRVYALKEGI 1016 L H S RY D + +F V ++G+ Sbjct: 266 LTHISTRYAA-SADELVDEARDAFDGEVVLAEDGM 299
>Q9KC61:RNZ_BACHD Ribonuclease Z - Bacillus halodurans| Length = 309 Score = 53.5 bits (127), Expect = 2e-06 Identities = 63/244 (25%), Positives = 95/244 (38%), Gaps = 25/244 (10%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLYRLRPPT-IFVPKY 431 FD G Q + + + +FI+H H DHI GLP + +R P ++ PK Sbjct: 36 FDCGEATQHQILRSSIALGKIERIFITHLHGDHIFGLPGLLGSRSFQGGENPLFLYGPKG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSV 611 + VE V + EL T+ KV H +P + + Sbjct: 96 IRSFVETALQVSNTHVKYEL--TIEEFSEPGLLFHEEGFKVETILLDHVMPCYAFKVTED 153 Query: 612 KQ--KLKQDYL---GLPGSEIKRLKLSG--VEITNTVTTPEVAFTGDTMS--DFILDPDN 764 + +L D L G+P + R G VE+ AF G F+L D Sbjct: 154 DRPGELLVDRLKAKGVPPGPLYRKIQQGETVELPTGERLEANAFLGPPKRGRSFVLAGDT 213 Query: 765 ADVLK-------AKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHF 923 V + +L+ E+TFLDD HA EYGH + + L+ + ++L H Sbjct: 214 RPVKELIPFAKNVNVLIHEATFLDDKKG--HAHEYGHSTMADAIQLAKQANVDHLILTHI 271 Query: 924 SARY 935 S+RY Sbjct: 272 SSRY 275
>Q65HN6:RNZ_BACLD Ribonuclease Z - Bacillus licheniformis (strain DSM 13 / ATCC| 14580) Length = 307 Score = 53.1 bits (126), Expect = 2e-06 Identities = 67/256 (26%), Positives = 107/256 (41%), Gaps = 32/256 (12%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLYRLRPP-TIFVPKY 431 FD G Q + + +FI+H H DH+ GLP V++R P T++ P+ Sbjct: 36 FDCGEATQHQILHTSIKPRKIEKIFITHLHGDHVYGLPGLVSSRSFQGGEGPLTVYGPQG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD-LKVRAFKTYHTIPSQGYVIYS 608 + +E DV + + + L+ ++GE D V A H IP+ GY + Sbjct: 96 IKTFLETALDV----SGTHVTYPLVIKEIGEGTVFEDDQFIVTARSVSHGIPAFGYRVQE 151 Query: 609 VKQKLKQDYLGL------PGSEIKRLKLSGVEIT----------NTVTTPE----VAFTG 728 D L PG ++LK +G +T + + P+ VAF+G Sbjct: 152 KDVPGALDAEALKEIGVSPGPVYQKLK-NGETVTLEDGRTIHGADFIGPPKKGRIVAFSG 210 Query: 729 DTMSDFILDPDNADVL--KAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENR 902 DT +N L KA +L+ E+TF E A +Y H + A + + + Sbjct: 211 DTR-----PCENVKRLAEKADVLIHEATFAKG--DRELAGDYYHSTSEQAAETAREACAK 263 Query: 903 AILLIHFSARYTTEEI 950 ++L H SARY E + Sbjct: 264 KLILTHISARYQGENV 279
>Q5YQ00:RNZ_NOCFA Ribonuclease Z - Nocardia farcinica| Length = 305 Score = 52.8 bits (125), Expect = 3e-06 Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 17/221 (7%) Frame = +3 Query: 330 ISHAHLDHIGGLPMYVATRGLYRLRPPT-IFVPKYLSELVERLFDVHRAMDQSELNHTLI 506 ++H H DH GLP V L R+ P + P E +RL + +L I Sbjct: 61 LTHFHGDHCLGLPGIVQRINLDRVAHPVDAYYPASGQEYFDRLCSASSFYRRVDLRTHPI 120 Query: 507 ----PLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYS-VKQKLKQDYL---GLPGSEIK 662 PLD + + A H + + GY + ++ D L G+ G I Sbjct: 121 AGPGPLDAPDA-----PFTIEAVALSHPVEAFGYRLTEPAGVRMLPDRLAALGIHGPRIG 175 Query: 663 RLKLSGVEITN--TVTTPEVAFTGDTMS-DFILD----PDNADVLKA-KILVMESTFLDD 818 L+ +G + + TVT EV+ S F++D P A++ +LV+E+TFLD Sbjct: 176 ELQRAGSLLVDGRTVTVAEVSEPRPGQSFAFVMDTRLCPGVAELAAGVDMLVIEATFLDA 235 Query: 819 SVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTT 941 + A EYGH+ + A ++ + R ++L HFS RY T Sbjct: 236 DAHL--AEEYGHLTAGQAARVAADADVRTLVLTHFSQRYRT 274
>Q64XI2:RNZ_BACFR Ribonuclease Z - Bacteroides fragilis| Length = 304 Score = 52.0 bits (123), Expect = 5e-06 Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 29/238 (12%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHT 500 +FISH H DH GL ++T GL R I PK L EL+ + + HT Sbjct: 59 IFISHLHGDHCFGLMGLISTFGLLGRTAELHIHSPKGLEELLTPMLNF--------FCHT 110 Query: 501 LIPLDVGEEYELR--------RDLKVRAFKTYHTIPSQGYVIYSVKQKLKQ------DYL 638 L + E++ R R + V H IP G+ +++ K + D+ Sbjct: 111 LAYKVIFHEFDTRQTSVVYEDRSMTVTTIPLQHRIPCCGF-LFAEKARPNHIIRDMVDFY 169 Query: 639 GLPGSEIKRLK-------LSGVEITNT-VTTP-----EVAFTGDTMSDFILDPDNADVLK 779 +P E+ R+K G I NT +T P + A+ DT I P+ + L Sbjct: 170 KVPVYELNRIKNGSDYVTPEGEVIANTRLTRPSDPPRKYAYCSDT----IFRPEIVEQLS 225 Query: 780 -AKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEI 950 +L E+TF + ++ A+E H + A ++ + R +++ HFSARY E I Sbjct: 226 GVDLLFHEATFAESELA--RAKETYHTTAAQAARIALEAGVRQLVIGHFSARYEDESI 281
>Q5LGN7:RNZ_BACFN Ribonuclease Z - Bacteroides fragilis (strain ATCC 25285 / NCTC| 9343) Length = 304 Score = 50.8 bits (120), Expect = 1e-05 Identities = 65/238 (27%), Positives = 101/238 (42%), Gaps = 29/238 (12%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHT 500 +FISH H DH GL ++T GL R I PK L EL+ + + HT Sbjct: 59 IFISHLHGDHCFGLMGLISTFGLLGRTAELHIHSPKGLEELLTPMLNF--------FCHT 110 Query: 501 LIPLDVGEEYELR--------RDLKVRAFKTYHTIPSQGYVIYSVKQKLKQ------DYL 638 L + E++ R R + V H IP G+ +++ K + D+ Sbjct: 111 LAYKVIFHEFDTRQTSVVYEDRSMTVTTIPLQHRIPCCGF-LFAEKARPNHIIRDMVDFY 169 Query: 639 GLPGSEIKRLK-------LSGVEITNT-VTTP-----EVAFTGDTMSDFILDPDNADVLK 779 +P E+ R+K G I NT +T P + A+ DT I P+ L Sbjct: 170 KVPVYELNRIKNGSDYVTPEGEVIANTRLTRPSDPPRKYAYCSDT----IFRPEIVKQLS 225 Query: 780 -AKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEI 950 +L E+TF + ++ A+E H + A ++ + R +++ HFSARY E I Sbjct: 226 GVDLLFHEATFAESELA--RAKETYHTTAAQAARIALEAGVRQLVIGHFSARYEDESI 281
>Q51834:RNZ_PORGI Ribonuclease Z - Porphyromonas gingivalis (Bacteroides gingivalis)| Length = 304 Score = 50.1 bits (118), Expect = 2e-05 Identities = 58/230 (25%), Positives = 103/230 (44%), Gaps = 26/230 (11%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFV------PKYLSELVERLFDVHRAMDQS 485 +FISH H DH GLP +++T GL R T+ V ++LS ++E+ HR Q Sbjct: 59 IFISHLHGDHCFGLPGFISTLGLLG-RTGTLHVHGPEGIERFLSPILEQF--CHRMPYQV 115 Query: 486 ELNHTLIPLDVGEEYELRRD--LKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEI 659 E+ HT +D + D +KV + H IP+ GY+ ++K + +L +E Sbjct: 116 EI-HT---IDASRHALVHEDKSVKVYSIPLSHRIPAVGYLF---EEKCRARHLNKAAAEF 168 Query: 660 KRLKLSGVEIT---NTVTTPEVAFTGDT--------------MSDFILDPDNADVLK-AK 785 + L+ + + TTP+ + SD P +++ Sbjct: 169 YNIPLAEYPLIIEGSDYTTPDGRIIPNRHLTTPGTPPRRYAYCSDTEFCPSIVPIIQGVD 228 Query: 786 ILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARY 935 +L E+TF+++ + A+E H E A ++ + + +L+ H+S RY Sbjct: 229 LLYHEATFMEEDRA--RAKETFHSTAKEAAEIARQAGAKRLLIGHYSGRY 276
>Q6KZJ4:RNZ_PICTO Ribonuclease Z - Picrophilus torridus| Length = 309 Score = 50.1 bits (118), Expect = 2e-05 Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 24/228 (10%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHT 500 +FISH H DH GLP ++T R+ IF P + ++++ ++ ++ + Sbjct: 60 IFISHFHGDHFFGLPGLLSTFSFNGRIDDLNIFGPPGTIDEIKKVL----SLIDFKITYN 115 Query: 501 LIPLDVGEEYELRRDL-KVRAFKTYHTIPSQGYVIYSVKQK-------LKQDYLGLPGSE 656 + ++ E + DL V A K HT GY Y +K+K K D +G P ++ Sbjct: 116 IKIAEMEENKKYDFDLFDVYAIKNDHT--KYGYS-YKLKEKDLIKINREKADSIGFPKNK 172 Query: 657 IKRLKLSGV-----------EITNTVTTPE-VAFTGDT--MSDFILDPDNADVLKAKILV 794 ++ L+ +G ++ + + + ++GDT +D + N DVL + Sbjct: 173 LELLRNNGEYYYMGKRYSIWDVADGIKPGRSIVYSGDTRPFNDMLKFASNCDVL-----I 227 Query: 795 MESTFLDDSVSIEH-AREYGHIHLFEIANLSDKFENRAILLIHFSARY 935 +ST SIE+ A EYGH + A ++ K + + L H+S+RY Sbjct: 228 HDSTM---DASIENLANEYGHSTARQAAEIALKANVKRLFLFHYSSRY 272
>Q5KXG8:RNZ_GEOKA Ribonuclease Z - Geobacillus kaustophilus| Length = 307 Score = 50.1 bits (118), Expect = 2e-05 Identities = 62/252 (24%), Positives = 104/252 (41%), Gaps = 30/252 (11%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLYRLRPP-TIFVPKY 431 FD G Q + + +FI+H H DH+ GLP + +R P T+F PK Sbjct: 36 FDCGEATQHQILHTAIRPRRIEHIFITHLHGDHLFGLPGLLGSRSFQSGETPLTVFGPKG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSV 611 + VE V + ELN ++ +D G ++ R V A + H +PS G+ + V Sbjct: 96 IRSFVETALAVSGTKLRYELN--IVEIDEGVIFDDER-FSVIAKRLDHGMPSYGFRV--V 150 Query: 612 KQKL-------KQDYLGL-PGSEIKRLKLSGVEITNTVTTPE-------------VAFTG 728 ++ L + LG+ PG + +K + + T + VA G Sbjct: 151 EKDLPGPLLVERLQALGVRPGPIYQEIKQGKTVVLDDGTVIDGREFVGPPQKGRIVAVLG 210 Query: 729 DTMSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAI 908 DT + A ++V E+TF + H +Y H + A ++ + + + Sbjct: 211 DTR---FCEAAIELARDADVVVHEATFAAAEQRLAH--DYFHSTTTDAAEVARRAGAKRL 265 Query: 909 LLIHFSARYTTE 944 +L H S+RY E Sbjct: 266 ILTHISSRYQGE 277
>Q92A38:RNZ_LISIN Ribonuclease Z - Listeria innocua| Length = 306 Score = 49.7 bits (117), Expect = 2e-05 Identities = 66/252 (26%), Positives = 100/252 (39%), Gaps = 33/252 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQDFL--------FISHAHLDHIGGLPMYVATRGLYRLRPP-TIFVPKY 431 FD G Q V + + FI+H H DHI GLP +++R TI+ P Sbjct: 36 FDCGEATQHQVLRSHIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSDLTIYGPAG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSV 611 ++E VE + ++N I V E E+ V A H + S G Y + Sbjct: 96 IAEYVETSLRLSGTRLTYKINFEEIEPGVIFEDEM---FLVTADDLDHGVRSFG---YRI 149 Query: 612 KQKLKQDYLGLPGSEIKRLKLSGVE---ITNTVTTPEVAFTGDTM----SDFILDPDNAD 770 +K KQ L ++LK GVE + + E+ D ++I +P Sbjct: 150 VEKDKQGAL-----NAEKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGK 204 Query: 771 V-----------------LKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFEN 899 + + A ILV E+TF D + A EY H + ANL+ Sbjct: 205 IISIFGDTKETVSELELAMNADILVHEATFEGDKAKM--AGEYMHSTTLQAANLAKAANV 262 Query: 900 RAILLIHFSARY 935 + ++L H S+RY Sbjct: 263 KKLILTHISSRY 274
>Q9PK48:RNZ_CHLMU Ribonuclease Z - Chlamydia muridarum| Length = 304 Score = 49.3 bits (116), Expect = 3e-05 Identities = 59/227 (25%), Positives = 105/227 (46%), Gaps = 19/227 (8%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 +FISH H DH GL + L ++ P + Y ++ FD R S + H Sbjct: 59 IFISHFHGDHCLGLGSMLMRLNLDKVSHP---IHCYYPASGKKYFDRLR---YSTIYHET 112 Query: 504 I-----PLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYS------VKQKLKQDYLGLPG 650 I P+ E + ++ A + H + + G+ I + +K+K GL G Sbjct: 113 IKVVEHPISSEGIVEDFGNFRIEARQLDHLVDTLGWRITEPDTTKFISEKIKA--AGLKG 170 Query: 651 SEIKRLKLSGVEITNT--VTTPEVAFT--GDTMS---DFILDPDNADVLK-AKILVMEST 806 ++ L G+ N + +V++T GD+++ D + D+ K A+IL+ EST Sbjct: 171 PIMQELINKGIIKVNNNIIRLEDVSYTRKGDSIAVVADSLPCQAIVDLAKNARILLCEST 230 Query: 807 FLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEE 947 +L++ + A+ + H+ + A + + E + ++L HFSARY T E Sbjct: 231 YLEEHAHL--AKNHYHMTAKQAAEQAKRAEAQQLILTHFSARYNTTE 275
>Q74MH2:RNZ_NANEQ Ribonuclease Z - Nanoarchaeum equitans| Length = 316 Score = 48.9 bits (115), Expect = 4e-05 Identities = 59/246 (23%), Positives = 101/246 (41%), Gaps = 25/246 (10%) Frame = +3 Query: 273 LAFDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLP-MYVATRGLYRLRPPTIFVP 425 + FD G QR + D++F++H H DHI GLP + ++ R TIF P Sbjct: 30 ILFDAGENTQRQMRLLNLSPTQIDYIFLTHIHGDHILGLPGILLSLSNQDYNRELTIFGP 89 Query: 426 KYLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIY 605 K + E++E++ D S + PL + E E + D ++ + I + Y Sbjct: 90 KGIKEVIEKIID-------SFAININFPLKIKEIGETKIDFGPFYIESIYGIHQVPVLAY 142 Query: 606 SVKQKLK--------QDYLGLPGSEIKRLKLSGVEITNTVTTPEVAFT-------GDTMS 740 S K+K K Y ++ +LK N +T FT ++ Sbjct: 143 SFKEKDKIKINKEKLAKYNIRSNPKLAKLKEGKSVTINGITLDPKEFTYIQKGLKFTLIT 202 Query: 741 DFILDPDNADVLK-AKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLI 917 D + D + + I+ E FLD + A E+ H + + + D+ ++ ++ I Sbjct: 203 DTLFREQFIDFARDSDIIFHELAFLDKDK--DKAIEHYHSTISDAFRIRDESNSKLLVFI 260 Query: 918 HFSARY 935 H S RY Sbjct: 261 HVSPRY 266
>Q8TWK0:RNZ_METKA Ribonuclease Z - Methanopyrus kandleri| Length = 279 Score = 48.9 bits (115), Expect = 4e-05 Identities = 66/247 (26%), Positives = 106/247 (42%), Gaps = 14/247 (5%) Frame = +3 Query: 252 VIFPTLSLAFDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLYRLRP 407 V F L D G QR + D + ++H H+DH+ GL T L R Sbjct: 28 VEFSGTKLLIDCGEGTQRRAMEQGVTIHDVDAVLLTHHHVDHVAGLLPLATTVDLLHGRR 87 Query: 408 PTIFVPKYLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPS 587 ++ P SE + D+ ++ E+N G+E E+ DL+V +++ H +P+ Sbjct: 88 LKVYGPTAGSESALDISDL-EVIEYREVN-------PGDEVEI-GDLRVLVYESEHGVPT 138 Query: 588 QGYVIYSVKQKLKQD--YL-GLPGSEIKRLKLSGVEITNTVTTP---EVAFTGDTMSDFI 749 Y I + K K D Y+ +P S+ + + L G E ++T P V GD Sbjct: 139 VDYRIETPKIPGKADPKYIRRVPPSKRREVLLRG-ERPYSLTKPGKISVYVKGDGRP--- 194 Query: 750 LDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSA 929 DP+N V ++LV E+ F D E A Y H E A ++ + ++L H S Sbjct: 195 ADPEN--VRGCQVLVHEACFEDH----EEAVRYLHSTHLEAAEVAREAGVDLLVLTHLST 248 Query: 930 RYTTEEI 950 + E + Sbjct: 249 KVDPERM 255
>Q71Y44:RNZ_LISMF Ribonuclease Z - Listeria monocytogenes serotype 4b (strain F2365)| Length = 306 Score = 48.9 bits (115), Expect = 4e-05 Identities = 65/252 (25%), Positives = 101/252 (40%), Gaps = 33/252 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLYRLRPP-TIFVPKY 431 FD G Q + + + +FI+H H DHI GLP +++R TI+ P Sbjct: 36 FDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSV 611 ++E VE + ++N I + E E+ V A H + S G Y + Sbjct: 96 IAEYVETSLRLSGTRLTYKINFEEIEPGLIFEDEM---FLVTADDLDHGVRSFG---YRI 149 Query: 612 KQKLKQDYLGLPGSEIKRLKLSGVE---ITNTVTTPEVAFTGDTM----SDFILDPDNAD 770 +K KQ L ++LK GVE + + E+ D ++I +P Sbjct: 150 VEKDKQGAL-----NAEKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGK 204 Query: 771 V-----------------LKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFEN 899 + L A ILV E+TF D + A EY H + ANL+ Sbjct: 205 IISIFGDTKETANELELALNADILVHEATFEGDKAKM--AGEYMHSTTLQAANLAKTANV 262 Query: 900 RAILLIHFSARY 935 + ++L H S+RY Sbjct: 263 KKLILTHISSRY 274
>Q5FKH3:RNZ_LACAC Ribonuclease Z - Lactobacillus acidophilus| Length = 312 Score = 48.9 bits (115), Expect = 4e-05 Identities = 67/252 (26%), Positives = 105/252 (41%), Gaps = 33/252 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQDFL--------FISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKY 431 FD+G Q + + + FISH H DHI GLP ++TR + P TI+ P Sbjct: 36 FDVGEATQHQILRTNIRLRKVTKIFISHNHGDHIFGLPGLLSTRSFQGDVGPLTIYGPAG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTY-----HTIPSQGY 596 + + V+ V R +++++ + +++ E + D R FK Y H IPS G+ Sbjct: 96 IEDFVKISLKVSR----TKISYPIHYVELSEPGLICED---RGFKVYTDRLDHRIPSFGF 148 Query: 597 VIY--SVKQKLKQDYL---GLPGSEIKRLKLSGVEITNTVTT---------PE-----VA 719 + S +L D L +P I +G ++ T PE + Sbjct: 149 RVVEDSHPGELLIDKLAEYNIPNGPILGKLKNGEQVALADGTILDGKDFLGPEKPGRIIT 208 Query: 720 FTGDTMSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFEN 899 DT S + D A +LV ESTF D + H Y H + A ++ + Sbjct: 209 IIYDTRSTSSIAHLAKD---ADVLVHESTFAGDESKMAH--NYYHSTSVQAAKIARQENV 263 Query: 900 RAILLIHFSARY 935 + + L H SARY Sbjct: 264 KQLCLNHISARY 275
>O84350:RNZ_CHLTR Ribonuclease Z - Chlamydia trachomatis| Length = 304 Score = 48.5 bits (114), Expect = 5e-05 Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 19/227 (8%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 +FISH H DH GL + L R+ P + Y ++ FD R S + H Sbjct: 59 IFISHFHGDHCLGLGSMLMRLNLDRVLHP---IHCYYPASGKKYFDRLR---YSTIYHET 112 Query: 504 I-----PLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYS------VKQKLKQDYLGLPG 650 I P+D E + ++ + + H + + G+ I + +K+K GL G Sbjct: 113 IKVIEHPIDREGIVEDFGNFRIESRQLDHLVDTLGWRITEPDTTKFIPEKIKA--AGLKG 170 Query: 651 SEIKRLKLSG-VEITNTVT-TPEVAFT--GDTMS---DFILDPDNADVLK-AKILVMEST 806 ++ L G V++ +T+ +V++T GD+++ D + D+ + A+IL+ EST Sbjct: 171 PIMQELINKGQVKVNDTIVHLDDVSYTRKGDSIAVVADSLPCQAIVDLARNARILLCEST 230 Query: 807 FLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEE 947 +L++ + A+ + H+ + A + + E + ++L HFSARY T E Sbjct: 231 YLEEHSHL--AKSHYHMTAKQAAEQAKRAEVQQLILTHFSARYNTTE 275
>Q29RY4:RNZ1_BOVIN Zinc phosphodiesterase ELAC protein 1 - Bos taurus (Bovine)| Length = 363 Score = 48.5 bits (114), Expect = 5e-05 Identities = 68/266 (25%), Positives = 104/266 (39%), Gaps = 62/266 (23%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYR-----LRPPTIFVPKYLSELVERLFDV-HRAMDQS 485 +FI+H H DH GLP + T L +P I+ P L + + R ++ H + Sbjct: 58 IFITHLHGDHFFGLPGLLCTISLQSGSMVTKQPIEIYGPVGLRDFIWRTMELSHTELVFP 117 Query: 486 ELNHTLIP--------------------------------LDVGEEYELRRD---LKVRA 560 + H L+P LD E L D V+A Sbjct: 118 YVVHELVPTADQCPTEELQESVQVDKTDNPPKEGEGRTILLDSEENSYLLVDDEQFVVKA 177 Query: 561 FKTYHTIPSQGYVIYSVK-------QKLKQDYLGLP-GSEIKRLKLS-GVEITNTVTTP- 710 F+ +H IPS G+ + K QKLK LG+P G +LK V + N VT Sbjct: 178 FRLFHRIPSFGFSVVEKKRPGKLNAQKLKD--LGVPPGPAYGKLKNGISVVLENGVTISP 235 Query: 711 -----------EVAFTGDTMSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHI 857 ++ GD S + D +A +L+ E+T D ++ A+E+GH Sbjct: 236 QDVLKKPIVGRKICILGDC-SGVVDDAGVKLCFEADLLIHEATL--DDTQMDKAKEHGHS 292 Query: 858 HLFEIANLSDKFENRAILLIHFSARY 935 A + + + ++L HFS RY Sbjct: 293 TPQMAATFAKLCQAKRLVLTHFSQRY 318
>Q8U182:RNZ_PYRFU Ribonuclease Z - Pyrococcus furiosus| Length = 307 Score = 48.1 bits (113), Expect = 7e-05 Identities = 66/250 (26%), Positives = 102/250 (40%), Gaps = 32/250 (12%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPT-IFVPKYLSELVERL---------FDV--H 467 +FI+H H DH GL + T L+ R I+ P+ E + FDV H Sbjct: 57 IFITHFHGDHYLGLAAIIQTMNLWDRRETLHIYGPENSGEFISNFLKSGYFAPGFDVVVH 116 Query: 468 RAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDY---- 635 ++ L E YE + F+ H IP+ GYV ++ D Sbjct: 117 EITGKARLQF--------ENYE------IWTFEVSHGIPALGYVFKEKDRRGNFDLEKIK 162 Query: 636 -LGL-PGSEIKRL-KLSGVEI------TNTVTTPE-----VAFTGDT--MSDFILDPDNA 767 LGL PG +K L K ++I + VT P+ V +TGDT + D + A Sbjct: 163 SLGLTPGPWMKELEKRKIIKIGERVIRLSEVTGPKKRGAKVVYTGDTEPIDDIVEFSKRA 222 Query: 768 DVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEE 947 D +L+ E+T+ +S EH ++ H + E + + R + L H + RY+ +E Sbjct: 223 D-----LLIHEATY----ISSEHRKDSYHTTIEEAYEMFKSSKARHLALFHRAPRYSYQE 273 Query: 948 IDAGISRLPP 977 L P Sbjct: 274 YAVAAKELCP 283
>Q731F6:RNZ_BACC1 Ribonuclease Z - Bacillus cereus (strain ATCC 10987)| Length = 307 Score = 48.1 bits (113), Expect = 7e-05 Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 27/246 (10%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKY 431 FD G Q + + +FI+H H DHI GLP + +R P T++ PK Sbjct: 36 FDCGEATQHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD--LKVRAFKTYHTIPSQGYVIY 605 + + +E V ++ + + + L +++ EE + D V + H I GY I Sbjct: 96 IKQFIE----VALSVSTTHVKYPLEIVEITEEGTVFEDNEFHVETKRLSHGIECFGYRII 151 Query: 606 --SVKQKLKQDYL---GL-PGSEIKRLKLSG-VEITNTVTTPEVAFTGDTMSDFIL---- 752 ++ L D L G+ PG KRLK VE+ N F G I+ Sbjct: 152 EKDIQGALLVDKLLEMGVKPGPLFKRLKDGEVVELENGTILNGQDFIGPPQKGRIITILG 211 Query: 753 -----DPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLI 917 + A +LV E+TF + + A +Y H + A+++ + + ++L Sbjct: 212 DTRFCEASRELAQDADVLVHEATFAAEDE--QQAYDYFHSTSKQAASIALQANAKRLILT 269 Query: 918 HFSARY 935 H S+RY Sbjct: 270 HISSRY 275
>Q635E2:RNZ_BACCZ Ribonuclease Z - Bacillus cereus (strain ZK / E33L)| Length = 307 Score = 47.8 bits (112), Expect = 9e-05 Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 27/246 (10%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKY 431 FD G Q + + +FI+H H DHI GLP + +R P T++ PK Sbjct: 36 FDCGEATQHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD--LKVRAFKTYHTIPSQGYVIY 605 + + +E V ++ + + + L +++ EE + D V + H I GY I Sbjct: 96 IKQFIE----VALSVSTTHVKYPLEIVEITEEGTVFEDNEFHVETKRLSHGIECFGYRII 151 Query: 606 --SVKQKLKQDYL---GL-PGSEIKRLKLSG-VEITNTVTTPEVAFTGDTMSDFIL---- 752 ++ L D L G+ PG KRLK VE+ N F G ++ Sbjct: 152 EKDIQGALLVDKLLEMGVKPGPLFKRLKDGEVVELENGTILNGKDFIGPPQKGRVITILG 211 Query: 753 -----DPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLI 917 + A +LV E+TF + + A +Y H + A+++ + + ++L Sbjct: 212 DTRYCEASRELAQDADVLVHEATFAAEDE--QQAYDYFHSTSKQAASIALQANAKRLILT 269 Query: 918 HFSARY 935 H S+RY Sbjct: 270 HISSRY 275
>Q8VEB6:RNZ1_MOUSE Zinc phosphodiesterase ELAC protein 1 - Mus musculus (Mouse)| Length = 362 Score = 47.8 bits (112), Expect = 9e-05 Identities = 73/265 (27%), Positives = 108/265 (40%), Gaps = 61/265 (23%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYR-----LRPPTIFVPKYLSELVERLFDV-HRAMDQS 485 +FI+H H DH GLP + T L +P I+ P L + + R ++ H + Sbjct: 58 IFITHLHGDHFFGLPGLLCTISLQSGSVVARQPIEIYGPVGLRDFIWRTMELSHTELVFP 117 Query: 486 ELNHTLIP-------------------------------LDVGEE-YELRRDLK--VRAF 563 + H L+P LD E Y L D + V+AF Sbjct: 118 YVVHELVPTADQCPVEELREFAHMDETDSSPKGQGRTILLDAEENSYCLVDDEQFVVKAF 177 Query: 564 KTYHTIPSQGYVIYSVK-------QKLKQDYLGL-PGSEIKRLKLS-GVEITNTVTTP-- 710 + +H IPS G+ + K QKL+ LG+ PG +LK V + N VT Sbjct: 178 RLFHRIPSFGFSVVEKKRAGKLNAQKLRD--LGVPPGPAYGKLKNGISVVLDNGVTISPQ 235 Query: 711 ----------EVAFTGDTMSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIH 860 +V GD S + D +A +L+ E+T LDDS ++ ARE+GH Sbjct: 236 DVLKKPMVGRKVCILGD-CSGVVGDGGVKLCFEADLLIHEAT-LDDS-QMDKAREHGHST 292 Query: 861 LFEIANLSDKFENRAILLIHFSARY 935 A + + ++L HFS RY Sbjct: 293 PQMAAAFAKLCRAKRLVLTHFSQRY 317
>Q73LB4:RNZ_TREDE Ribonuclease Z - Treponema denticola| Length = 308 Score = 47.4 bits (111), Expect = 1e-04 Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 22/231 (9%) Frame = +3 Query: 324 LFISHAHLDHIGGLP-MYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHT 500 +FISH H DHI GLP + + + + R P I P ++E VE R + +N+ Sbjct: 58 IFISHTHADHITGLPGLLMLSSQVDREEPLYIIGPPKVAEYVE----TSRKVLDMYINYE 113 Query: 501 LIPLDVGEEYEL--RRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQD-----YLGLPGSEI 659 +I ++ E + + +VR+F HT P GY ++ + + L +P + Sbjct: 114 IIVKEIREPGVVYSTEEFQVRSFWLDHTKPCMGYTFEEFERPGEFNPEAARALNVPCGPL 173 Query: 660 KRLKLSGVEITN----TVTTPEV----------AFTGDTMSDFILDPDNADVLKAKILVM 797 G E+ + T+ +V +F DT L +V + V Sbjct: 174 WSKLQGGNEVVSADGKTIRPQDVMGPKRKGRKFSFVTDTK---YLPSIAQEVKYSDFFVC 230 Query: 798 ESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEI 950 E F + + A E H+ + A ++ E + + LIH+S RYT E+ Sbjct: 231 EGMF--EKGMEKDAAEKKHMTCTQAAQIAKDAEVKKMALIHYSPRYTDNEL 279
>Q6HE20:RNZ_BACHK Ribonuclease Z - Bacillus thuringiensis subsp. konkukian| Length = 307 Score = 47.4 bits (111), Expect = 1e-04 Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 27/246 (10%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKY 431 FD G Q + + +FI+H H DHI GLP + +R P T++ PK Sbjct: 36 FDCGEATQHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD--LKVRAFKTYHTIPSQGYVIY 605 + + +E V ++ + + + L +++ EE + D V + H I GY I Sbjct: 96 IKQFIE----VALSVSTTHVKYPLEIVEITEEGTVFEDNEFHVETKRLSHGIECFGYRII 151 Query: 606 --SVKQKLKQDYL---GL-PGSEIKRLKLSG-VEITNTVTTPEVAFTGDTMSDFIL---- 752 ++ L D L G+ PG KRLK VE+ N F G ++ Sbjct: 152 EKDIQGALLVDKLLEMGVKPGPLFKRLKDGEVVELENGTILNGNDFIGPPQKGRVITILG 211 Query: 753 -----DPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLI 917 + A +LV E+TF + + A +Y H + A+++ + + ++L Sbjct: 212 DTRYCEASRELAQDADVLVHEATFAAEDE--QQAYDYFHSTSKQAASIALQANAKRLILT 269 Query: 918 HFSARY 935 H S+RY Sbjct: 270 HISSRY 275
>Q81M88:RNZ_BACAN Ribonuclease Z - Bacillus anthracis| Length = 307 Score = 47.4 bits (111), Expect = 1e-04 Identities = 61/246 (24%), Positives = 103/246 (41%), Gaps = 27/246 (10%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKY 431 FD G Q + + +FI+H H DHI GLP + +R P T++ PK Sbjct: 36 FDCGEATQHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD--LKVRAFKTYHTIPSQGYVIY 605 + + +E V ++ + + + L +++ EE + D V + H I GY I Sbjct: 96 IKQFIE----VALSVSTTHVKYPLEIVEITEEGTVFEDNEFHVETKRLSHGIECFGYRII 151 Query: 606 --SVKQKLKQDYL---GL-PGSEIKRLKLSG-VEITNTVTTPEVAFTGDTMSDFIL---- 752 ++ L D L G+ PG KRLK VE+ N F G ++ Sbjct: 152 EKDIQGALLVDKLLEIGVKPGPLFKRLKDGEVVELENGTILNGNDFIGPPQKGRVITILG 211 Query: 753 -----DPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLI 917 + A +LV E+TF + + A +Y H + A+++ + + ++L Sbjct: 212 DTRYCEASRELAQDADVLVHEATFAAEDE--QQAYDYFHSTSKQAASIALQANAKRLILT 269 Query: 918 HFSARY 935 H S+RY Sbjct: 270 HISSRY 275
>Q9H777:RNZ1_HUMAN Zinc phosphodiesterase ELAC protein 1 - Homo sapiens (Human)| Length = 363 Score = 47.4 bits (111), Expect = 1e-04 Identities = 68/266 (25%), Positives = 103/266 (38%), Gaps = 62/266 (23%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYR-----LRPPTIFVPKYLSELVERLFDV-HRAMDQS 485 +FI+H H DH GLP + T L +P I+ P L + + R ++ H + Sbjct: 58 IFITHLHGDHFFGLPGLLCTISLQSGSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVFH 117 Query: 486 ELNHTLIP--------------------------------LDVGEEYELRRD---LKVRA 560 + H L+P LD E L D V+A Sbjct: 118 YVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDSEENSYLLFDDEQFVVKA 177 Query: 561 FKTYHTIPSQGYVIYSVK-------QKLKQDYLGLP-GSEIKRLKLS-GVEITNTVTTP- 710 F+ +H IPS G+ + K QKLK LG+P G +LK V + N VT Sbjct: 178 FRLFHRIPSFGFSVVEKKRPGKLNAQKLKD--LGVPPGPAYGKLKNGISVVLENGVTISP 235 Query: 711 -----------EVAFTGDTMSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHI 857 ++ GD S + D +A +L+ E+T D ++ A+E+GH Sbjct: 236 QDVLKKPIVGRKICILGDC-SGVVGDGGVKLCFEADLLIHEATL--DDAQMDKAKEHGHS 292 Query: 858 HLFEIANLSDKFENRAILLIHFSARY 935 A + + ++L HFS RY Sbjct: 293 TPQMAATFAKLCRAKRLVLTHFSQRY 318
>Q89ZN1:RNZ_BACTN Ribonuclease Z - Bacteroides thetaiotaomicron| Length = 316 Score = 46.2 bits (108), Expect = 3e-04 Identities = 60/227 (26%), Positives = 93/227 (40%), Gaps = 18/227 (7%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERLFDVH-RAMDQSELNH 497 +FISH H DH GL ++T GL R I PK L EL L + + H Sbjct: 59 IFISHLHGDHCFGLLGLISTFGLLGRTADLHIHSPKGLEELFAPLLSFFCKTLAYKVFFH 118 Query: 498 TLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQ------DYLGLPGSEI 659 + Y+ R + V H IP G+ ++ KQ+ D+ +P E+ Sbjct: 119 EFETKEPTLIYD-DRSVAVTTIPLRHRIPCCGF-LFEEKQRPNHIIRDMVDFYKVPVYEL 176 Query: 660 KRLKLSGVEIT--------NTVTTPEV-AFTGDTMSDFILDPDNADVLKA-KILVMESTF 809 R+K +T + +T P A SD I P+ + +K +L E+TF Sbjct: 177 NRIKNGADFVTPEGEVIPNHRLTRPSAPARKYAYCSDTIYRPEIVEQIKGIDLLFHEATF 236 Query: 810 LDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEI 950 A+E H + A ++ E + +++ HFSARY E + Sbjct: 237 A--QTEQVRAKETHHTTAAQAAQIALNAEVKQLVIGHFSARYEDESV 281
>Q818V3:RNZ_BACCR Ribonuclease Z - Bacillus cereus (strain ATCC 14579 / DSM 31)| Length = 307 Score = 46.2 bits (108), Expect = 3e-04 Identities = 63/252 (25%), Positives = 106/252 (42%), Gaps = 33/252 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKY 431 FD G Q + + +FI+H H DHI GLP + +R P T++ PK Sbjct: 36 FDCGEATQHQILHTSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGTTPLTVYGPKG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD--LKVRAFKTYHTIPSQGYVIY 605 + + +E V ++ + + + L +++ EE + D V + H I GY I Sbjct: 96 IKQFIE----VALSVSTTHVKYPLEVVEITEEGTVFEDNEFYVETKRLSHGIECFGYRIV 151 Query: 606 --SVKQKLKQDYL---GL-PGSEIKRLK------------LSGVEITNTVTTPE----VA 719 ++ L D L G+ PG KRLK L+G E + P+ + Sbjct: 152 EKDIQGALLVDKLLEMGVKPGPIFKRLKDGEVVELEDGTILNGNEF---IGPPQKGRIIT 208 Query: 720 FTGDTMSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFEN 899 GDT + A +LV E+TF + + A +Y H + A+++ + Sbjct: 209 ILGDTR---YCEASRELAQDADVLVHEATFAAEDE--QQAYDYFHSTSKQAASIALQANA 263 Query: 900 RAILLIHFSARY 935 + ++L H S+RY Sbjct: 264 KRLILTHISSRY 275
>Q8Y5S8:RNZ_LISMO Ribonuclease Z - Listeria monocytogenes| Length = 306 Score = 45.8 bits (107), Expect = 3e-04 Identities = 64/252 (25%), Positives = 100/252 (39%), Gaps = 33/252 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLYRLRPP-TIFVPKY 431 FD G Q + + + +FI+H H DHI GLP +++R TI+ P Sbjct: 36 FDCGEATQHQIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSV 611 ++E VE + ++N I V E ++ V A H + S G Y + Sbjct: 96 IAEYVETSLRLSGTRLTYKINFEEIEPGVIFEDKM---FIVTADDLDHGVRSFG---YRI 149 Query: 612 KQKLKQDYLGLPGSEIKRLKLSGVE---ITNTVTTPEVAFTGDTM----SDFILDPDNAD 770 +K KQ L ++LK GVE + + E+ D ++I +P Sbjct: 150 VEKDKQGAL-----NAEKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGK 204 Query: 771 V-----------------LKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFEN 899 + L A ILV E+TF D + A EY H + A L+ Sbjct: 205 IISIFGDTRETSSELELALNADILVHEATFEGDKAKM--AGEYMHSTTLQAAKLAKTANV 262 Query: 900 RAILLIHFSARY 935 + ++L H S+RY Sbjct: 263 KKLILTHISSRY 274
>Q58271:Y861_METJA UPF0036 protein MJ0861 - Methanococcus jannaschii| Length = 448 Score = 45.4 bits (106), Expect = 5e-04 Identities = 59/240 (24%), Positives = 98/240 (40%), Gaps = 15/240 (6%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 + +SH HLDHIG +P +R P I P Y ELV+R + D + + L Sbjct: 77 IVLSHGHLDHIGAVPKLA-----HRYNAPIIGTP-YTIELVKREILSEKKFD---VRNPL 127 Query: 504 IPLDVGEEYELRRDLKVRAFKTYHTIPSQ---------GYVIYSVKQKLKQDYLGLPGSE 656 I L+ GE +L ++ + + H+IP G ++Y K D + G Sbjct: 128 IVLNAGESIDLTPNITLEFIRITHSIPDSVLPVLHTPYGSIVYG--NDFKFDNFPVVGER 185 Query: 657 -----IKRLKLSGVEITNTVTTPEVAFTGDTMSDFILDPDNADVLKAKILVMESTFLDDS 821 IK++ +GV + TT + G T + I + +LK +L + +D Sbjct: 186 PDYRAIKKVGKNGVLCFISETT-RINHEGKTPPEIIA----SGLLKNDLLAAD----NDK 236 Query: 822 VSIEHAREYGHI-HLFEIANLSDKFENRAILLIHFSARYTTEEIDAGISRLPPSFLSRVY 998 I HI + I ++++K +LL R+ D G+ + P R+Y Sbjct: 237 HGIIVTTFSSHIARIKSITDIAEKMGRTPVLLGRSMMRFCGIAQDIGLVKFPEDL--RIY 294
>Q88VG6:RNZ_LACPL Ribonuclease Z - Lactobacillus plantarum| Length = 311 Score = 45.4 bits (106), Expect = 5e-04 Identities = 62/250 (24%), Positives = 95/250 (38%), Gaps = 30/250 (12%) Frame = +3 Query: 279 FDIGRCPQRAVSQDFL--------FISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKY 431 FD+G Q + + L FI+H H DHI GLP +++R P TI+ P Sbjct: 36 FDVGEGTQHQILRTTLKPRKIAKIFITHLHGDHIFGLPGLLSSRSFQGGDEPLTIYGPVG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTY-----HTIPSQGY 596 + + V+ V H PL E + + FK H I GY Sbjct: 96 VRDFVQTALRVSG-------THLSYPLKFHEITKAETVFEDATFKVSCEPLDHRIACFGY 148 Query: 597 VIYSVKQ--KLKQD---YLGLPGSEIKRLKLSGVEIT----------NTVTTPEVAFTGD 731 + +L+ D L +P + +G +T + + P+ T Sbjct: 149 RVEEADHPGELQADRLKALNIPSGPVYGQLKAGKTVTLPDGRTINGQDYIAAPQKGRTVT 208 Query: 732 TMSDFILDPDNADVLK-AKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAI 908 + D P + + A LV ESTF D + H Y H + A ++ + + + Sbjct: 209 ILGDTRRTPHAVSLAQDADALVHESTFGKDEGKLAH--NYYHSTSTQAAQVAQQAGVKQL 266 Query: 909 LLIHFSARYT 938 LL H SARYT Sbjct: 267 LLTHISARYT 276
>P54548:RNZ_BACSU Ribonuclease Z - Bacillus subtilis| Length = 307 Score = 45.4 bits (106), Expect = 5e-04 Identities = 59/248 (23%), Positives = 96/248 (38%), Gaps = 29/248 (11%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGLYRLRPP-TIFVPKY 431 FD G Q + + +FI+H H DH+ GLP + +R T++ PK Sbjct: 36 FDCGEATQHQILHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVYGPKG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRD-LKVRAFKTYHTIPSQGYVIY- 605 + +E A+ ++ L + L ++ E D V A H + + GY + Sbjct: 96 IKAFIE----TSLAVTKTHLTYPLAIQEIEEGIVFEDDQFIVTAVSVIHGVEAFGYRVQE 151 Query: 606 -SVKQKLKQDYL---GLPGSEIKRLKLSGVEIT---------NTVTTP-----EVAFTGD 731 V LK D L +P + + G +T N P V F+GD Sbjct: 152 KDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGD 211 Query: 732 TMSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAIL 911 T + D +LV E+TF + + A +Y H + A + + + ++ Sbjct: 212 TR---VSDKLKELARDCDVLVHEATFAKEDRKL--AYDYYHSTTEQAAVTAKEARAKQLI 266 Query: 912 LIHFSARY 935 L H SARY Sbjct: 267 LTHISARY 274
>O27859:RNZ_METTH Ribonuclease Z - Methanobacterium thermoautotrophicum| Length = 307 Score = 45.1 bits (105), Expect = 6e-04 Identities = 61/232 (26%), Positives = 99/232 (42%), Gaps = 23/232 (9%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERLFDVHRAMDQSELN-H 497 +FI+H H DHI G+P + + G R P I+ P + EL E + + ++N H Sbjct: 57 IFITHLHGDHILGIPGMIQSMGFRGREEPLDIYGPPGIHELHECIMKMGYFTLDFDINVH 116 Query: 498 TLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQ----KLKQDYLGL-PGSEIK 662 + V EE D +V + H++ + Y K+ + K LGL PG Sbjct: 117 EVRGGTVVEE----DDYRVTSAPASHSVFNLAYCFEEKKRPRFLREKAIALGLKPGPAFG 172 Query: 663 RLKLS-GVEITNTVTTPE-----------VAFTGDTMSDFILDPDNADVLK----AKILV 794 +L V + + + PE V ++GDT V+K A++L+ Sbjct: 173 KLHRGIPVRVGDRIIMPEEVLGSPRKGVKVCYSGDTR-------PCESVIKLAEGAELLI 225 Query: 795 MESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEI 950 EST ++ S + A E GH E A ++ + ++L H S RY E+ Sbjct: 226 HESTL--EAGSEDKAAESGHSTAREAAEVARSAGVKRLILTHLSTRYKRTEV 275
>Q5WGC3:RNZ_BACSK Ribonuclease Z - Bacillus clausii (strain KSM-K16)| Length = 312 Score = 44.7 bits (104), Expect = 8e-04 Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 21/238 (8%) Frame = +3 Query: 297 PQRAVSQDFLFISHAHLDHIGGLPMYVATRGLYRLRPP-TIFVPKYLSELVERLFDVHRA 473 P + + +FI+H H DHI GLP +++R P I+ PK L V + + + Sbjct: 50 PLSLAAVEAIFITHLHGDHILGLPGLLSSRSFQGAETPLDIYGPKGLEAFVIQALETTKT 109 Query: 474 MDQSELN-HTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQD-----Y 635 + + H L + +E L V A H + S + I + D Sbjct: 110 KLRFPIRFHVLAEGRIRDE----EKLSVDALALDHPVESYAFRIKEQDKPGTLDAEALKA 165 Query: 636 LGLPGSEI-------KRLKLSGVEITNTVTTPEVAFTGDTMSDFILDPDNADVLK----- 779 +G+P + + +KL+ I N + + G T+ ++ D A V Sbjct: 166 MGVPPGPLYAQLKKGETVKLADGRIVNGSAFLDESIRGRTV---VIAGDTAPVKAMEAFA 222 Query: 780 --AKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEE 947 A +LV E+TF + H YGH + + L+ + ++L H S+RY E Sbjct: 223 SGADVLVHEATFASNKKDDAHL--YGHSTIADACALAKRAAVGQLILTHVSSRYARNE 278
>Q8DT90:RNZ_STRMU Ribonuclease Z - Streptococcus mutans| Length = 309 Score = 43.9 bits (102), Expect = 0.001 Identities = 64/257 (24%), Positives = 103/257 (40%), Gaps = 33/257 (12%) Frame = +3 Query: 279 FDIGRCPQRAVSQDFL--------FISHAHLDHIGGLPMYVATRGLYRLRPPT---IFVP 425 FD G QR + + + FI+H H DH+ GLP ++++R T I+ P Sbjct: 36 FDCGEGTQRQILETTIKPRKIRKIFITHLHGDHVFGLPGFLSSRAFQANDEQTDVDIYGP 95 Query: 426 KYLSELVERLFDVHRAMDQSELN-HTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVI 602 + LV A ++ H +G+ E + V A K HTI GY + Sbjct: 96 VGIKHLVMASIRTSGAHLPYHIHFHEFDAKHLGKILETDK-FMVYAEKLDHTIFCVGYRV 154 Query: 603 YSV-------KQKLKQDYLGLPGSEIKRLKLSGVEIT----------NTVTTPE----VA 719 +KLK GLP + +G ++ + ++ P+ + Sbjct: 155 VQKDLEGTLDAEKLKA--AGLPFGPLFGRVKNGQDVVLEDGTTIIAKDYISAPKKGKVIT 212 Query: 720 FTGDTMSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFEN 899 GDT D L A +LV EST+ ++ AR +GH E A ++ Sbjct: 213 ILGDTRK---TDASIRLALGADVLVHESTYSKGDENL--ARRHGHSTNTEAARVAKAASV 267 Query: 900 RAILLIHFSARYTTEEI 950 + +LL H SAR+ + +I Sbjct: 268 KKLLLNHISARFLSHDI 284
>Q9RDE4:RNZ_STRCO Ribonuclease Z - Streptomyces coelicolor| Length = 301 Score = 43.9 bits (102), Expect = 0.001 Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 16/222 (7%) Frame = +3 Query: 330 ISHAHLDHIGGLPMYVATRGLYRL-RPPTIFVPKYLSELVERLFDVHRAMDQSELNHTLI 506 ++H H DH GL + L R+ T P+ ERL + L + Sbjct: 61 VTHFHGDHSLGLAGVIQRINLDRVPHEITAHYPRSGQRFFERLRYATAYRETVALTEVPV 120 Query: 507 ----PLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVK-QKLKQDYL---GLPGSEIK 662 PL V Y L A + H + S GY + +++ + L G+ G ++ Sbjct: 121 AADGPLAVTPAYTLD------ARRLSHPVESYGYRLTEPDGRRMLPERLAAHGITGPDVG 174 Query: 663 RLK----LSGV---EITNTVTTPEVAFTGDTMSDFILDPDNADVLKAKILVMESTFLDDS 821 R++ L GV E++ AF DT + + +A + +LV+ESTFLD+ Sbjct: 175 RIQRDGSLGGVALDEVSEVRRGQRFAFVMDTR---LCEGVHALAEDSDLLVIESTFLDED 231 Query: 822 VSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEE 947 ++ A ++GH+ + A ++ R ++L HFS RY+ E Sbjct: 232 ETL--ATDHGHLTAGQAARVARDAGVRHLVLTHFSQRYSDPE 271
>Q6ME16:RNZ_PARUW Ribonuclease Z - Protochlamydia amoebophila (strain UWE25)| Length = 306 Score = 43.9 bits (102), Expect = 0.001 Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 17/221 (7%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 +FISH H DH GL + L ++R P + Y ++ FD R + H + Sbjct: 59 IFISHFHGDHCLGLGSILMRLNLDKVRHP---IHCYYPASGKKYFDRLR---YGTIYHEM 112 Query: 504 I-----PLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVK-QKLKQDYL---GLPGSE 656 I P+ E K+ A H I + G+ I +K L G+ GS Sbjct: 113 IHVVEHPVSKAGLVEDDGRFKIEAAFLQHGIENIGWRITEADTRKFDNQKLIDRGIRGSL 172 Query: 657 IKRLKLSGVEITN--TVTTPEVAFT--GDTMSDFI--LDPDNA-DVLK-AKILVMESTFL 812 +K L+ G + T+ +V++ GD S I L NA D+ + A +L+ EST+L Sbjct: 173 VKELQEKGQLNLDGQTIYLDDVSWIRKGDQFSVVIDTLPCQNAIDIARNATLLLCESTYL 232 Query: 813 DDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARY 935 ++ + AR + H+ + A ++ + + ++L HFSARY Sbjct: 233 EEHKEL--ARLHSHLTAKQAALIAKEANAKQLILTHFSARY 271
>Q8FFK8:RNZ_ECOL6 Ribonuclease Z - Escherichia coli O6| Length = 305 Score = 42.7 bits (99), Expect = 0.003 Identities = 59/231 (25%), Positives = 97/231 (41%), Gaps = 25/231 (10%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVATRGLYR-LRPPTIFVPKYLSELVERLFDVHRAMDQSELN 494 D +FISH H DH+ GLP + +R + ++P TI+ P + E VE + + L Sbjct: 58 DKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPHGIREFVETALRISGSWTDYPLE 117 Query: 495 HTLIPLDVGEEYE--LRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGL------PG 650 ++ + GE ++ LR KV A+ H + GY I + + L PG Sbjct: 118 --IVEIGAGEIFDDGLR---KVTAYPMEHPLECYGYRIEEHDKPGALNAQALKAAGVPPG 172 Query: 651 SEIKRLK------------LSGVE-ITNTVTTPEVAFTGDTMSDFILDPDNADVLKAK-- 785 + LK ++G + + V +A GDT P +A + AK Sbjct: 173 PLFQELKAGKTIMLDDGRQINGADYLAVPVPGKALAIFGDT------GPCDAALELAKGV 226 Query: 786 -ILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARY 935 ++V E+T D A GH + A L+ + +++ H S+RY Sbjct: 227 DVMVHEATL--DMAMEAKANSRGHSSTRQAAALAREAGVGKLIITHVSSRY 275
>P0A8V1:RNZ_SHIFL Ribonuclease Z - Shigella flexneri| Length = 305 Score = 42.4 bits (98), Expect = 0.004 Identities = 59/231 (25%), Positives = 97/231 (41%), Gaps = 25/231 (10%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVATRGLYR-LRPPTIFVPKYLSELVERLFDVHRAMDQSELN 494 D +FISH H DH+ GLP + +R + ++P TI+ P+ + E VE + + L Sbjct: 58 DKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLE 117 Query: 495 HTLIPLDVGEEYE--LRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGL------PG 650 ++ + GE + LR KV A+ H + GY I + + L PG Sbjct: 118 --IVEIGAGEILDDGLR---KVTAYPLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPG 172 Query: 651 SEIKRLK------------LSGVE-ITNTVTTPEVAFTGDTMSDFILDPDNADVLKAK-- 785 + LK ++G + + V +A GDT P +A + AK Sbjct: 173 PLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDT------GPCDAALDLAKGV 226 Query: 786 -ILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARY 935 ++V E+T D A GH + A L+ + +++ H S+RY Sbjct: 227 DVMVHEATL--DITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRY 275
>P0A8V0:RNZ_ECOLI Ribonuclease Z - Escherichia coli| Length = 305 Score = 42.4 bits (98), Expect = 0.004 Identities = 59/231 (25%), Positives = 97/231 (41%), Gaps = 25/231 (10%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVATRGLYR-LRPPTIFVPKYLSELVERLFDVHRAMDQSELN 494 D +FISH H DH+ GLP + +R + ++P TI+ P+ + E VE + + L Sbjct: 58 DKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLE 117 Query: 495 HTLIPLDVGEEYE--LRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGL------PG 650 ++ + GE + LR KV A+ H + GY I + + L PG Sbjct: 118 --IVEIGAGEILDDGLR---KVTAYPLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPG 172 Query: 651 SEIKRLK------------LSGVE-ITNTVTTPEVAFTGDTMSDFILDPDNADVLKAK-- 785 + LK ++G + + V +A GDT P +A + AK Sbjct: 173 PLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDT------GPCDAALDLAKGV 226 Query: 786 -ILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARY 935 ++V E+T D A GH + A L+ + +++ H S+RY Sbjct: 227 DVMVHEATL--DITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRY 275
>Q8XCZ0:RNZ_ECO57 Ribonuclease Z - Escherichia coli O157:H7| Length = 305 Score = 42.4 bits (98), Expect = 0.004 Identities = 63/233 (27%), Positives = 98/233 (42%), Gaps = 27/233 (11%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVATRGLYR-LRPPTIFVPKYLSELVERLFDVHRAMDQSELN 494 D +FISH H DH+ GLP + +R + ++P TI+ P+ + E VE + + L Sbjct: 58 DKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVETALRISGSWTDYPLE 117 Query: 495 HTLIPLDVGEEYE--LRRDLKVRAFKTYHTIPSQGYVIYS-------VKQKLKQDYLGLP 647 ++ + GE + LR KV A+ H + GY I Q LK G+P Sbjct: 118 --IVEIGAGEILDDGLR---KVTAYPMEHPLECYGYRIEEHDKPGALNAQALKA--AGVP 170 Query: 648 GS----EIKRLKLSGVE----------ITNTVTTPEVAFTGDTMSDFILDPDNADVLKAK 785 S E+K K +E + V +A GDT P +A + AK Sbjct: 171 PSPLFQELKAGKTIMLEDGRQINGADYLAAPVPGKALAIFGDT------GPCDAALDLAK 224 Query: 786 ---ILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARY 935 ++V E+T D A GH + A L+ + +++ H S+RY Sbjct: 225 GVDVMVHEATL--DITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRY 275
>P47385:Y139_MYCGE UPF0036 protein MG139 - Mycoplasma genitalium| Length = 569 Score = 41.6 bits (96), Expect = 0.007 Identities = 25/87 (28%), Positives = 47/87 (54%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L ++ P I+ P+ + L+ + + H+ ++LN + Sbjct: 77 LFITHGHEDHIGGVPYL-----LKQVDIPVIYAPRIAASLILKKVNEHK---DAKLN-KI 127 Query: 504 IPLDVGEEYELRRDLKVRAFKTYHTIP 584 + D E++ + K+ ++ H+IP Sbjct: 128 VTFDDFSEFQTKH-FKIDFYRVNHSIP 153
>Q8DZ99:RNZ_STRA5 Ribonuclease Z - Streptococcus agalactiae serotype V| Length = 309 Score = 41.6 bits (96), Expect = 0.007 Identities = 63/255 (24%), Positives = 101/255 (39%), Gaps = 36/255 (14%) Frame = +3 Query: 279 FDIGRCPQRAVSQDFL--------FISHAHLDHIGGLPMYVATRGLYRLRPPT---IFVP 425 FD G QR + + + FI+H H DH+ GLP ++++R T I+ P Sbjct: 36 FDCGEGTQRQILETTIKPRKVKKIFITHMHGDHVFGLPGFLSSRAFQANEEQTDLDIYGP 95 Query: 426 KYLSELVERLFDVHRAMDQSELN-HTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVI 602 + V + ++ H +G+ E + V A K HTI GY + Sbjct: 96 VGIKSFVMTALRTSGSRLPYRIHFHEFDESSLGKIMETDK-FTVYAEKLDHTIFCMGYRV 154 Query: 603 YSVKQKLKQDYLGLPGSEIKRLKLSGV---EITNTVTTPEVAFTGD----TMSDFILDPD 761 +++D G +E LKL+GV + V E D D+I +P Sbjct: 155 ------VQKDLEGTLDAE--ALKLAGVPFGPLFGKVKNGENVTLEDGREIIAKDYISEPK 206 Query: 762 NADV-----------------LKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDK 890 V L A +LV EST+ I A+ +GH + A+++ + Sbjct: 207 KGKVITILGDTRKTDASIRLALGADVLVHESTYGKGDERI--AKSHGHSTNMQAADIAKQ 264 Query: 891 FENRAILLIHFSARY 935 + +LL H SAR+ Sbjct: 265 ANAKRLLLNHVSARF 279
>Q74JN5:RNZ_LACJO Ribonuclease Z - Lactobacillus johnsonii| Length = 309 Score = 41.6 bits (96), Expect = 0.007 Identities = 64/257 (24%), Positives = 97/257 (37%), Gaps = 37/257 (14%) Frame = +3 Query: 279 FDIGRCPQRAVSQDFL--------FISHAHLDHIGGLPMYVATRGLYRLRPP-TIFVPKY 431 FD+G Q + + + FISH H DHI GLP ++++R P TI+ P Sbjct: 36 FDVGEATQHQILKTNIRPRKVTRIFISHTHGDHIFGLPGFLSSRSFQGDGGPLTIYGPAG 95 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVI--- 602 + + V+ V + + + ++ D G +E V + H +PS G+ + Sbjct: 96 IEQFVQTSLRVSKTRVSYPIKYVVLKED-GLIFE-NDIFAVYTARLDHRVPSFGFRVVEK 153 Query: 603 -------------YSVKQ-----KLK-------QDYLGLPGSEIKRLKLSGVEITNTVTT 707 Y+V +LK D L G + + G +T T Sbjct: 154 PRPGELLMDKVAEYNVPNGPLLGQLKAGKIITLSDGQKLDGRDFLGEERPGRIVTIIYDT 213 Query: 708 PEVAFTGDTMSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSD 887 G+ DNADV LV ESTF D + A Y H + A ++ Sbjct: 214 RPTKNIGEL-------ADNADV-----LVHESTF--DGGEEKMAHRYFHSTCLDAARVAR 259 Query: 888 KFENRAILLIHFSARYT 938 + L H SARYT Sbjct: 260 DHNVGELYLTHISARYT 276
>Q823T8:RNZ_CHLCV Ribonuclease Z - Chlamydophila caviae| Length = 306 Score = 41.6 bits (96), Expect = 0.007 Identities = 58/232 (25%), Positives = 108/232 (46%), Gaps = 20/232 (8%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHR--AMDQSELNH 497 +FISH H DH GL + L ++ P + Y ++ FD R + ++ Sbjct: 59 IFISHFHGDHCLGLGSMLMRLNLDKVTHP---IHCYYPASGKKYFDRLRYGTIYHETIHV 115 Query: 498 TLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGY------VIYSVKQKLKQDYLGLPGSEI 659 P+D E + ++ A K H + + G+ I + +K+K GL G + Sbjct: 116 VEHPVDKEGIVEDFGNFRIEARKLDHLVDTLGWRITEPDTIKFIPEKIKA--AGLRGPIM 173 Query: 660 KRLKLSGVEIT---NTVTTPEVAFT--GDT---MSDFILDPDNADVLK-AKILVMESTFL 812 + L L +T NT+ +V++ GD+ ++D + D+ K A+I++ EST+L Sbjct: 174 QDL-LRDDHVTVNGNTIYLKDVSYVRKGDSIAVIADTLPCQSVVDLAKDARIMLCESTYL 232 Query: 813 DDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTE---EIDAG 959 ++ + + A+ + H+ + A + + ++L HFSARY E++AG Sbjct: 233 EEHLHL--AKSHYHMTAKQAATQALAAGAQQLVLTHFSARYLNSKEFELEAG 282
>Q979A8:RNZ_THEVO Ribonuclease Z - Thermoplasma volcanium| Length = 304 Score = 41.2 bits (95), Expect = 0.009 Identities = 58/252 (23%), Positives = 105/252 (41%), Gaps = 32/252 (12%) Frame = +3 Query: 279 FDIGRCPQRAV--------SQDFLFISHAHLDHIGGLPMYVATRGL-YRLRPPTIFVPKY 431 FD G Q+ + S D +FI+H H DH GL V + R + IF P+ Sbjct: 37 FDCGEGTQKQIMKSKWSFMSIDNIFITHFHGDHFLGLIGLVQSMSFNNRTKDLNIFGPRG 96 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGY----- 596 ++ ++ + +N + L+ + Y+L + L ++ H +P+ Y Sbjct: 97 AIGIISNAINIGYYTLRFRIN--VYELEPDKTYDLGKFL-LKTTLNDHPVPALSYTIEEK 153 Query: 597 -VIYSVKQKLKQDYLGLPGSEIKRLKLSGV-----------EITNTVTT-PEVAFTGDT- 734 +I QK K+ LG+P I++++ +G EI+ + ++ +TGDT Sbjct: 154 DIIRVDPQKAKE--LGIPSKIIEKIRDNGTYEYRGRKYSIDEISGGIRKGRKIVYTGDTK 211 Query: 735 ----MSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENR 902 M+DF D +L+ ++T DS ++GH + A ++ Sbjct: 212 PMQKMADFAKHAD--------VLIHDTT--TDSSFEPAVNQFGHSSAKQAARIARDAGVS 261 Query: 903 AILLIHFSARYT 938 + L H+S R T Sbjct: 262 RLFLYHYSPRIT 273
>Q5L6G2:RNZ_CHLAB Ribonuclease Z - Chlamydophila abortus| Length = 306 Score = 41.2 bits (95), Expect = 0.009 Identities = 56/238 (23%), Positives = 97/238 (40%), Gaps = 26/238 (10%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 +FISH H DH GL + L ++ P + Y ++ FD + + H Sbjct: 59 IFISHFHGDHCLGLGSMLMRLNLDKVTHP---IHCYYPASGKKYFD---RLRYGTIYHET 112 Query: 504 I-----PLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRL 668 I P+D E + ++ A K H + + G+ I + D + +IK Sbjct: 113 IRVIEHPIDKEGIVEDFGNFRIEARKLNHLVDTLGWRI------TEPDTIKFIPEKIKAA 166 Query: 669 KLSGVEITNTVTTPEVAFTGDTM-----------------SDFILDPDNADVLK-AKILV 794 L G + + + V G T+ +D + P D+ K A+I++ Sbjct: 167 GLRGPIMQDLLRNEHVTVNGKTLYLKDLSYIRKGDSIAVIADTLPCPSIVDLAKNARIML 226 Query: 795 MESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTE---EIDAG 959 EST+L++ + A + H+ + A + + ++L HFSARY EI+AG Sbjct: 227 CESTYLEEHSHL--AESHYHMTAKQAATQALAAGAQQLVLTHFSARYLNSKEFEIEAG 282
>P75497:Y280_MYCPN UPF0036 protein MG139 homolog - Mycoplasma pneumoniae| Length = 569 Score = 40.8 bits (94), Expect = 0.011 Identities = 25/87 (28%), Positives = 46/87 (52%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L ++ P I+ P+ + L+ + + H+ ++LN + Sbjct: 77 LFITHGHEDHIGGVPYL-----LKQVDVPVIYAPRIAASLILKKVNEHK---DAKLNKVV 128 Query: 504 IPLDVGEEYELRRDLKVRAFKTYHTIP 584 + D +E + K+ ++ H+IP Sbjct: 129 V-YDDFSNFETKH-FKIDFYRVNHSIP 153
>P60195:RNZ_SALTY Ribonuclease Z - Salmonella typhimurium| Length = 305 Score = 40.8 bits (94), Expect = 0.011 Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 23/239 (9%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHT 500 +FISH H DH+ GLP + +R + P T++ P+ + E + + + L Sbjct: 60 IFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIATTLRLSGSWTDFPLQIE 119 Query: 501 LIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGL------PGSEIK 662 I + LR KV AF+ H + GY + + + L PG + Sbjct: 120 EISAGDILDDGLR---KVTAFRLEHPLECYGYRVVEHDKPGALNARALKAAGVTPGPLFQ 176 Query: 663 RLK------------LSGVE-ITNTVTTPEVAFTGDTMSDFILDPDNADVLKAK---ILV 794 LK ++G + + V VA GDT P A + A+ ++V Sbjct: 177 ALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGDTA------PCEAALALAQGVDVMV 230 Query: 795 MESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEIDAGISRL 971 E+T LD S+ E A GH + A L+ + +++ H S+RY D G RL Sbjct: 231 HETT-LDASME-EKANARGHSSTRQTATLAREAAVGRLIMTHISSRYD----DKGCQRL 283
>P60194:RNZ_SALTI Ribonuclease Z - Salmonella typhi| Length = 305 Score = 40.8 bits (94), Expect = 0.011 Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 23/239 (9%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHT 500 +FISH H DH+ GLP + +R + P T++ P+ + E + + + L Sbjct: 60 IFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIATTLRLSGSWTDFPLQIE 119 Query: 501 LIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGL------PGSEIK 662 I + LR KV AF+ H + GY + + + L PG + Sbjct: 120 EISAGDILDDGLR---KVTAFRLEHPLECYGYRVVEHDKPGALNARALKAAGVTPGPLFQ 176 Query: 663 RLK------------LSGVE-ITNTVTTPEVAFTGDTMSDFILDPDNADVLKAK---ILV 794 LK ++G + + V VA GDT P A + A+ ++V Sbjct: 177 ALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGDTA------PCEAALALAQGVDVMV 230 Query: 795 MESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEIDAGISRL 971 E+T LD S+ E A GH + A L+ + +++ H S+RY D G RL Sbjct: 231 HETT-LDASME-EKANARGHSSTRQTATLAREAAVGRLIMTHISSRYD----DKGCQRL 283
>Q5PN69:RNZ_SALPA Ribonuclease Z - Salmonella paratyphi-a| Length = 305 Score = 40.8 bits (94), Expect = 0.011 Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 23/239 (9%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHT 500 +FISH H DH+ GLP + +R + P T++ P+ + E + + + L Sbjct: 60 IFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIATTLRLSGSWTDFPLQIE 119 Query: 501 LIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGL------PGSEIK 662 I + LR KV AF+ H + GY + + + L PG + Sbjct: 120 EISAGDILDDGLR---KVTAFRLEHPLECYGYRVVEHDKPGALNARALKAAGVTPGPLFQ 176 Query: 663 RLK------------LSGVE-ITNTVTTPEVAFTGDTMSDFILDPDNADVLKAK---ILV 794 LK ++G + + V VA GDT P A + A+ ++V Sbjct: 177 ALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGDTA------PCEAALALAQGVDVMV 230 Query: 795 MESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEIDAGISRL 971 E+T LD S+ E A GH + A L+ + +++ H S+RY D G RL Sbjct: 231 HETT-LDASME-EKANARGHSSTRQTATLAREAAVGRLIMTHISSRYD----DKGCQRL 283
>Q57M43:RNZ_SALCH Ribonuclease Z - Salmonella choleraesuis| Length = 305 Score = 40.8 bits (94), Expect = 0.011 Identities = 61/239 (25%), Positives = 97/239 (40%), Gaps = 23/239 (9%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHT 500 +FISH H DH+ GLP + +R + P T++ P+ + E + + + L Sbjct: 60 IFISHLHGDHLFGLPGLLCSRSMAGNPHPLTVYGPQGVREFIATTLRLSGSWTDFPLQIE 119 Query: 501 LIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGL------PGSEIK 662 I + LR KV AF+ H + GY + + + L PG + Sbjct: 120 EISAGDILDDGLR---KVTAFRLEHPLECYGYRVVEHDKPGALNARALKAAGVTPGPLFQ 176 Query: 663 RLK------------LSGVE-ITNTVTTPEVAFTGDTMSDFILDPDNADVLKAK---ILV 794 LK ++G + + V VA GDT P A + A+ ++V Sbjct: 177 ALKAGKTVTLADGRQINGADYLAPAVAGKSVAIFGDTA------PCEAALALAQGVDVMV 230 Query: 795 MESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEIDAGISRL 971 E+T LD S+ E A GH + A L+ + +++ H S+RY D G RL Sbjct: 231 HETT-LDASME-EKANARGHSSTRQTATLAREAAVGRLIMTHISSRYD----DKGCQRL 283
>Q57626:Y162_METJA Uncharacterized protein MJ0162 - Methanococcus jannaschii| Length = 421 Score = 40.4 bits (93), Expect = 0.015 Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 2/225 (0%) Frame = +3 Query: 282 DIGRCPQRAVSQDFLFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFD 461 +I + +AV D + +SHAHLDH G +P Y + +Y P + + Sbjct: 39 EIPKVDDKAV--DAVIVSHAHLDHCGAIPFY-KFKKIYCTHP----TADLMFITWRDTLN 91 Query: 462 VHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLG 641 + +A + ++ H + ++ YE R+ + FK Y+ G+++ S YL Sbjct: 92 LTKAYKEEDIQHAMENIECLNYYEERQITENIKFKFYNA----GHILGSA-----SIYLE 142 Query: 642 LPGSEIKRLKLSGVEITNTVTTPEVAFTGDTMSDF--ILDPDNADVLKAKILVMESTFLD 815 + G +I +TGD L P + D+ + +L++EST+ Sbjct: 143 VDGKKI-------------------LYTGDINEGVSRTLLPADTDIDEIDVLIIESTY-G 182 Query: 816 DSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEI 950 + I+ AR+ L E +S+ EN ++I A +EI Sbjct: 183 SPLDIKPARKTLERQLIE--EISETIENGGKVIIPVFAIGRAQEI 225
>Q8E4W1:RNZ_STRA3 Ribonuclease Z - Streptococcus agalactiae serotype III| Length = 309 Score = 40.4 bits (93), Expect = 0.015 Identities = 63/255 (24%), Positives = 101/255 (39%), Gaps = 36/255 (14%) Frame = +3 Query: 279 FDIGRCPQRAVSQDFL--------FISHAHLDHIGGLPMYVATRGLYRLRPPT---IFVP 425 FD G QR + + + FI+H H DH+ GLP ++++R T I+ P Sbjct: 36 FDCGEGTQRQILETTIKPRKVKKIFITHMHGDHVFGLPGFLSSRAFQANEEQTDLDIYGP 95 Query: 426 KYLSELVERLFDVHRAMDQSELN-HTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVI 602 + V + ++ H +G+ E + V A K HTI GY + Sbjct: 96 VGIKSFVMTGLRTSGSRLPYRIHFHEFDESSLGKIMETDK-FTVYAEKLDHTIFCMGYRV 154 Query: 603 YSVKQKLKQDYLGLPGSEIKRLKLSGV---EITNTVTTPEVAFTGD----TMSDFILDPD 761 +++D G +E LKL+GV + V E D D+I +P Sbjct: 155 ------VQKDLEGTLDAE--ALKLAGVPFGPLFGKVKNGENVTLEDGREIIAKDYISEPK 206 Query: 762 NADV-----------------LKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDK 890 V L A +LV EST+ I A+ +GH + A+++ + Sbjct: 207 KGKVITILGDTRKTDASIRLALGADVLVHESTYGKGDERI--AKSHGHSTNMQAADIAKQ 264 Query: 891 FENRAILLIHFSARY 935 + +LL H SAR+ Sbjct: 265 ANAKRLLLNHVSARF 279
>Q5M3Y3:RNZ_STRT2 Ribonuclease Z - Streptococcus thermophilus (strain ATCC BAA-250 /| LMG 18311) Length = 309 Score = 39.7 bits (91), Expect = 0.025 Identities = 65/261 (24%), Positives = 101/261 (38%), Gaps = 37/261 (14%) Frame = +3 Query: 279 FDIGRCPQRAVSQDFL--------FISHAHLDHIGGLPMYVATRGLYRLRPPT---IFVP 425 FD G QR + + + FI+H H DHI GLP ++A+R T ++ P Sbjct: 36 FDCGEGTQRQILETTIKPRKVKKIFITHMHGDHIFGLPGFLASRSFQSSEEQTDLEVYGP 95 Query: 426 KYLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLK--VRAFKTYHTIPSQGYV 599 + + V + + + + + +D + D K V A K HTI GY Sbjct: 96 VGIKQYV--MTSIRTSGTRLSYHVHFKEIDENSLGLVMEDDKFAVYADKLDHTIFCVGYR 153 Query: 600 IYSVKQKLKQDYLGLPGSEIKRLKLSGV-------EITNTVTTPEVAFTGDTMSDFILDP 758 + +++D G +E LK +GV +I N T DFI P Sbjct: 154 V------VQKDLEGTLDAE--ALKAAGVPFGPLFGQIKNGQDVVLEDGTKIIAKDFISAP 205 Query: 759 DNADV-----------------LKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSD 887 V L A +LV EST+ I A+ +GH + A ++ Sbjct: 206 KKGKVITILGDTRKTNASVRLGLGADVLVHESTYGKGDEKI--AKSHGHSTNMQAAQVAR 263 Query: 888 KFENRAILLIHFSARYTTEEI 950 + +LL H SAR+ +I Sbjct: 264 DASAKRLLLNHVSARFLGRDI 284
>Q5LZD1:RNZ_STRT1 Ribonuclease Z - Streptococcus thermophilus (strain CNRZ 1066)| Length = 309 Score = 39.7 bits (91), Expect = 0.025 Identities = 65/261 (24%), Positives = 101/261 (38%), Gaps = 37/261 (14%) Frame = +3 Query: 279 FDIGRCPQRAVSQDFL--------FISHAHLDHIGGLPMYVATRGLYRLRPPT---IFVP 425 FD G QR + + + FI+H H DHI GLP ++A+R T ++ P Sbjct: 36 FDCGEGTQRQILETTIKPRKVKKIFITHMHGDHIFGLPGFLASRSFQSSEEQTDLEVYGP 95 Query: 426 KYLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLK--VRAFKTYHTIPSQGYV 599 + + V + + + + + +D + D K V A K HTI GY Sbjct: 96 VGIKQYV--MTSIRTSGTRLSYHVHFKEIDENSLGLVMEDDKFAVYADKLDHTIFCVGYR 153 Query: 600 IYSVKQKLKQDYLGLPGSEIKRLKLSGV-------EITNTVTTPEVAFTGDTMSDFILDP 758 + +++D G +E LK +GV +I N T DFI P Sbjct: 154 V------VQKDLEGTLDAE--ALKAAGVPFGPLFGQIKNGQDVVLEDGTKIIAKDFISAP 205 Query: 759 DNADV-----------------LKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSD 887 V L A +LV EST+ I A+ +GH + A ++ Sbjct: 206 KKGKVITILGDTRKTNASVRLGLGADVLVHESTYGKGDEKI--AKSHGHSTNMQAAQVAR 263 Query: 888 KFENRAILLIHFSARYTTEEI 950 + +LL H SAR+ +I Sbjct: 264 DASAKRLLLNHVSARFLGRDI 284
>P60198:RNZ_STRP3 Ribonuclease Z - Streptococcus pyogenes serotype M3| Length = 309 Score = 39.7 bits (91), Expect = 0.025 Identities = 63/253 (24%), Positives = 102/253 (40%), Gaps = 34/253 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQDFL--------FISHAHLDHIGGLPMYVATRGLYRLRPPT---IFVP 425 FD G QR + + + FI+H H DHI GLP ++++R T I+ P Sbjct: 36 FDCGEGTQRQILETTIKPRKIRKIFITHLHGDHIFGLPGFLSSRSFQASEEQTDLDIYGP 95 Query: 426 KYLSELVERLFDVHRAMDQSELN-HTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVI 602 + V V A +++ H +G+ E + +V A + HTI GY + Sbjct: 96 IGIKTYVLTSLKVSGARVPYQIHFHEFDDKSLGKIMETDK-FEVYAERLAHTIFCMGYRV 154 Query: 603 YSVKQKLKQDYLGLPGSEIKRLKLSG-------VEI--------TNTVTTPE----VAFT 725 + D L + + L G VE+ + ++ P+ + Sbjct: 155 VQKDLEGTLDAEALKAAGVPFGPLFGKIKNGQDVELEDGRLICAKDYISAPKKGKIITII 214 Query: 726 GDTMSDFILDPDNADVLKAK---ILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFE 896 GDT +A V AK +LV EST+ I AR +GH + A ++ + Sbjct: 215 GDTRK------TSASVKLAKDADVLVHESTYGKGDERI--ARNHGHSTNMQAAQIAHEAG 266 Query: 897 NRAILLIHFSARY 935 + +LL H SAR+ Sbjct: 267 AKRLLLNHVSARF 279
>P60199:RNZ_STRP1 Ribonuclease Z - Streptococcus pyogenes serotype M1| Length = 309 Score = 39.7 bits (91), Expect = 0.025 Identities = 63/253 (24%), Positives = 102/253 (40%), Gaps = 34/253 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQDFL--------FISHAHLDHIGGLPMYVATRGLYRLRPPT---IFVP 425 FD G QR + + + FI+H H DHI GLP ++++R T I+ P Sbjct: 36 FDCGEGTQRQILETTIKPRKIRKIFITHLHGDHIFGLPGFLSSRSFQASEEQTDLDIYGP 95 Query: 426 KYLSELVERLFDVHRAMDQSELN-HTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVI 602 + V V A +++ H +G+ E + +V A + HTI GY + Sbjct: 96 IGIKTYVLTSLKVSGARVPYQIHFHEFDDKSLGKIMETDK-FEVYAERLAHTIFCMGYRV 154 Query: 603 YSVKQKLKQDYLGLPGSEIKRLKLSG-------VEI--------TNTVTTPE----VAFT 725 + D L + + L G VE+ + ++ P+ + Sbjct: 155 VQKDLEGTLDAEALKAAGVPFGPLFGKIKNGQDVELEDGRLICAKDYISAPKKGKIITII 214 Query: 726 GDTMSDFILDPDNADVLKAK---ILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFE 896 GDT +A V AK +LV EST+ I AR +GH + A ++ + Sbjct: 215 GDTRK------TSASVKLAKDADVLVHESTYGKGDERI--ARNHGHSTNMQAAQIAHEAG 266 Query: 897 NRAILLIHFSARY 935 + +LL H SAR+ Sbjct: 267 AKRLLLNHVSARF 279
>Q45493:YKQC_BACSU UPF0036 protein ykqC - Bacillus subtilis| Length = 555 Score = 39.3 bits (90), Expect = 0.032 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 4/97 (4%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTI--FVPKYLSELVERLFDVHRAMDQSELNH 497 LFI+H H DHIGG+P Y LR I + K L+ + H + Q++LN Sbjct: 70 LFITHGHEDHIGGIP--------YLLRQVNIPVYGGKLAIGLLRNKLEEHGLLRQTKLN- 120 Query: 498 TLIPLDVGEEYELR-RDLKVRAFKTYHTIP-SQGYVI 602 +GE+ ++ R V F+T H+IP S G V+ Sbjct: 121 -----IIGEDDIVKFRKTAVSFFRTTHSIPDSYGIVV 152
>P81414:Y020_PYRFU UPF0173 protein PF0020 - Pyrococcus furiosus| Length = 210 Score = 39.3 bits (90), Expect = 0.032 Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 2/102 (1%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNH 497 D++ ++H H+DH G P+ + P T+ YL + + L V Sbjct: 37 DYILVTHEHMDHYGKTPLIAKLSDAEVIGPKTV----YLMAISDGLTKVRE--------- 83 Query: 498 TLIPLDVGEEYELRRDLKVRAFKTYHTIPSQ--GYVIYSVKQ 617 ++VG+E EL D++VRAF T H GY+I K+ Sbjct: 84 ----IEVGQEIEL-GDIRVRAFFTEHPTSQYPLGYLIEGSKR 120
>Q8DQN1:RNZ_STRR6 Ribonuclease Z - Streptococcus pneumoniae (strain ATCC BAA-255 /| R6) Length = 309 Score = 39.3 bits (90), Expect = 0.032 Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 28/237 (11%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPT---IFVPKYLSELVERLFDVHRAMDQSELN 494 +FI+H H DHI GLP ++++R T I+ P+ + V V + ++ Sbjct: 59 IFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFVLTSLRVSGSRLPYRIH 118 Query: 495 -HTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLK 671 H +G+ E + V A + HTI GY + +++D G +E +LK Sbjct: 119 FHEFDQDSLGKILETDK-FTVYAEELDHTIFCVGYRV------MQKDLEGTLDAE--KLK 169 Query: 672 LSGV-------EITNTVTTPEVAFTGDTMSDFILDPDNADVL-----------------K 779 +GV +I N T +D+I P ++ Sbjct: 170 AAGVPFGPLFGKIKNGQDLVLEDGTEIKAADYISAPRPGKIITILGDTRKTGASVRLAVN 229 Query: 780 AKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEI 950 A +LV EST+ I AR +GH + A ++ + + +LL H SAR+ +++I Sbjct: 230 ADVLVHESTYGKGDEKI--ARNHGHSTNMQAAQVAVEAGAKRLLLNHISARFLSKDI 284
>Q97RW2:RNZ_STRPN Ribonuclease Z - Streptococcus pneumoniae| Length = 309 Score = 39.3 bits (90), Expect = 0.032 Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 28/237 (11%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPT---IFVPKYLSELVERLFDVHRAMDQSELN 494 +FI+H H DHI GLP ++++R T I+ P+ + V V + ++ Sbjct: 59 IFITHLHGDHIFGLPGFLSSRAFQANEEQTDLEIYGPQGIKSFVLTSLRVSGSRLPYRIH 118 Query: 495 -HTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIKRLK 671 H +G+ E + V A + HTI GY + +++D G +E +LK Sbjct: 119 FHEFDQDSLGKILETDK-FTVYAEELDHTIFCVGYRV------MQKDLEGTLDAE--KLK 169 Query: 672 LSGV-------EITNTVTTPEVAFTGDTMSDFILDPDNADVL-----------------K 779 +GV +I N T +D+I P ++ Sbjct: 170 AAGVPFGPLFGKIKNGQDLVLEDGTEIKAADYISAPRPGKIITILGDTRKTGASVRLAVN 229 Query: 780 AKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEEI 950 A +LV EST+ I AR +GH + A ++ + + +LL H SAR+ +++I Sbjct: 230 ADVLVHESTYGKGDEKI--ARNHGHSTNMQAAQVAVEAGAKRLLLNHISARFLSKDI 284
>Q660C0:RNZ_BORGA Ribonuclease Z - Borrelia garinii| Length = 319 Score = 39.3 bits (90), Expect = 0.032 Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 26/229 (11%) Frame = +3 Query: 330 ISHAHLDHIGGL---PMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHT 500 I+H H DHI GL M ++ G R P I P + + D+ + E+ + Sbjct: 60 ITHLHADHITGLLGIVMLMSQSGETRKEPLIIAGPVGIKNYTKTNIDILKIYKNYEIIYK 119 Query: 501 LIPLDVGEE--YELRRDLKVRAFKTYHTIPSQGYVIYSVKQK------LKQDYLGLPGSE 656 I +D E+ YE + K+ + H+I GY ++ K K K + L +P Sbjct: 120 EIIIDKTEKIIYE-DKTKKIEYTRLKHSIECVGY-LFIEKDKPGKFNTEKAEELNIPKGP 177 Query: 657 IKRLKLSGVE--ITNTVTTP-----------EVAFTGDT--MSDFILDPDNADVLKAKIL 791 I++ G E I + P +VA+ DT + I N + ++ Sbjct: 178 IRKTLQDGKEILIDGKIIKPSEILGESKKGLKVAYITDTGYFKELIQQIKNFN-----LV 232 Query: 792 VMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYT 938 ++ESTF ++ + A + H+ AN+ + + LIHFS RYT Sbjct: 233 IIESTFKNELK--KEADKKLHLTAGGAANIVKQAKVLKTGLIHFSERYT 279
>Q8XKN1:RNZ_CLOPE Ribonuclease Z - Clostridium perfringens| Length = 316 Score = 38.9 bits (89), Expect = 0.042 Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 34/239 (14%) Frame = +3 Query: 312 SQDFLFISHAHLDHIGGLPMYVATRG-LYRLRPPTIFVPKYLSELVERL--------FDV 464 S D + ISH H DHI GLP ++T G R+ I P + E++E + + Sbjct: 53 SIDIICISHLHGDHIYGLPGLLSTIGNSGRVEDIYIIGPNGIKEVIEGFLITLPYLPYKL 112 Query: 465 HRAMDQSELNHTLIPLDVGEEYELRR----DLKVRAFKTYHTIPSQGYVI-------YSV 611 + D S L ++ + E EL DL + H+ P GY ++V Sbjct: 113 NILEDASNLEF-MVKKEKIELVELNEKISSDLTIETLGLDHSSPCLGYSFNIRRGRKFNV 171 Query: 612 KQKLKQDYLGLPGSEIKR---LKLSGVEITNTVTTPE------VAFTGDT-----MSDFI 749 ++ L S+++R + L+GV+ + + + +++T DT + FI Sbjct: 172 EKALMNKVPKELWSKLQRNEEVSLNGVKYYSYMVLGDERKGIKLSYTTDTRPTEDIPGFI 231 Query: 750 LDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFS 926 + D + + E T+ + + A + H+ E ANL+ K + + +LL HFS Sbjct: 232 KESD--------LYICEGTYGSEE-DMHKAIKNKHMTFKEAANLAKKGQVKELLLTHFS 281
>O44476:RNZ_CAEEL Ribonuclease Z - Caenorhabditis elegans| Length = 833 Score = 38.9 bits (89), Expect = 0.042 Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 13/227 (5%) Frame = +3 Query: 294 CPQRAVSQDFLFISHAHLDHIGGLPMYVATR--GLYRLRPPTIFVPKYLSELVERLFDVH 467 C Q V+ + + I+HAH DH+ GL +A R L P + + V + + Sbjct: 544 CKQLLVNLNCVLITHAHQDHMNGLYTIIARRKEAFESLGAPYRPLVLVCNRNVLKPMKTY 603 Query: 468 RAMDQSELNHTLIPLDVGEEYELRRDL-------KVRAFKTYHTIPSQGYVIYSVKQKLK 626 ++ + H L +D+ Y L K + H PS+ V+ + Sbjct: 604 SICFEN-IEHLLEIVDISR-YPLTPPGSPGGPPGKRPRLPSPHLPPSRD-VLQDMSSSFD 660 Query: 627 QDYLGLPGSEIKRLKLSGVEITN----TVTTPEVAFTGDTMSDFILDPDNADVLKAKILV 794 + L E+K +++ + N V + F+GDT +L + D A +LV Sbjct: 661 KKAWKL--DELKAVQVHHTRMANGFVMRVAGKRIVFSGDTKPCDLLVEEGKD---ADVLV 715 Query: 795 MESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARY 935 ESTF D + A H + + ++ + + I+L HFSARY Sbjct: 716 HESTFEDGHEA--DAMRKRHSTMGQAVDVGKRMNAKHIILTHFSARY 760
>Q8P1A6:RNZ_STRP8 Ribonuclease Z - Streptococcus pyogenes serotype M18| Length = 309 Score = 38.5 bits (88), Expect = 0.055 Identities = 63/253 (24%), Positives = 101/253 (39%), Gaps = 34/253 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQDFL--------FISHAHLDHIGGLPMYVATRGLYRLRPPT---IFVP 425 FD G QR + + + FI+H H DHI GLP ++++R T I+ P Sbjct: 36 FDCGEGTQRQILETTIKPRKIRKIFITHLHGDHIFGLPGFLSSRSFQASEEQTDLDIYGP 95 Query: 426 KYLSELVERLFDVHRAMDQSELN-HTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVI 602 + V V A +++ H +G+ E + V A + HTI GY + Sbjct: 96 IGIKTYVLTSLKVSGARVPYQIHFHEFDDKSLGKIMETDK-FVVYAERLAHTIFCMGYRV 154 Query: 603 YSVKQKLKQDYLGLPGSEIKRLKLSG-------VEI--------TNTVTTPE----VAFT 725 + D L + + L G VE+ + ++ P+ + Sbjct: 155 VQKDLEGTLDAEALKAAGVPFGPLFGKIKNGQDVELEDGRLICAKDYISAPKKGKIITII 214 Query: 726 GDTMSDFILDPDNADVLKAK---ILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFE 896 GDT +A V AK +LV EST+ I AR +GH + A ++ + Sbjct: 215 GDTRK------TSASVKLAKDADVLVHESTYGKGDERI--ARNHGHSTNMQAAQIAHEAG 266 Query: 897 NRAILLIHFSARY 935 + +LL H SAR+ Sbjct: 267 AKRLLLNHVSARF 279
>Q5XCH7:RNZ_STRP6 Ribonuclease Z - Streptococcus pyogenes serotype M6| Length = 309 Score = 38.5 bits (88), Expect = 0.055 Identities = 63/253 (24%), Positives = 101/253 (39%), Gaps = 34/253 (13%) Frame = +3 Query: 279 FDIGRCPQRAVSQDFL--------FISHAHLDHIGGLPMYVATRGLYRLRPPT---IFVP 425 FD G QR + + + FI+H H DHI GLP ++++R T I+ P Sbjct: 36 FDCGEGTQRQILETTIKPRKIRKIFITHLHGDHIFGLPGFLSSRSFQASEEQTDLDIYGP 95 Query: 426 KYLSELVERLFDVHRAMDQSELN-HTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVI 602 + V V A +++ H +G+ E + V A + HTI GY + Sbjct: 96 IGIKTYVLTSLKVSGARVPYQIHFHEFDDKSLGKIMETDK-FVVYAERLAHTIFCMGYRV 154 Query: 603 YSVKQKLKQDYLGLPGSEIKRLKLSG-------VEI--------TNTVTTPE----VAFT 725 + D L + + L G VE+ + ++ P+ + Sbjct: 155 VQKDLEGTLDAEALKAAGVPFGPLFGKIKNGQDVELEDGRLICAKDYISAPKKGKIITII 214 Query: 726 GDTMSDFILDPDNADVLKAK---ILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFE 896 GDT +A V AK +LV EST+ I AR +GH + A ++ + Sbjct: 215 GDTRK------TSASVKLAKDADVLVHESTYGKGDERI--ARNHGHSTNMQAAQIAHEAG 266 Query: 897 NRAILLIHFSARY 935 + +LL H SAR+ Sbjct: 267 AKRLLLNHVSARF 279
>Q9Z9F6:RNZ_CHLPN Ribonuclease Z - Chlamydia pneumoniae (Chlamydophila pneumoniae)| Length = 307 Score = 38.5 bits (88), Expect = 0.055 Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 28/249 (11%) Frame = +3 Query: 273 LAFDIGRCPQRA--------VSQDFLFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPK 428 L FD G QR + + +F+SH H DH GL + L ++ P + Sbjct: 34 LLFDPGEGTQRQFIFANIAPTTVNRIFVSHFHGDHCLGLGSMLMRLNLDKVSHP---IHC 90 Query: 429 YLSELVERLFDVHRAMDQSELNHTLIPLDVGEE--YELRRDLKVRAFKTYHTIPSQGYVI 602 Y ++ FD R ++ + EE E ++ A + H + + G+ I Sbjct: 91 YYPASGKKYFDRLRYGTIYHETIQVVEHPISEEGIVEDFGSFRIEAQRLQHQVDTLGWRI 150 Query: 603 YSVKQKLKQDYLGLPGSEIKRLKLSGVEITNTVTTPEVAFTGDT--MSD--FILDPDN-- 764 + D + E++ + G+ I + + E++ G T +SD ++ D+ Sbjct: 151 ------TEPDTIKFLPKELESRGIRGLIIQDLIRDQEISIGGSTVYLSDVSYVRKGDSIA 204 Query: 765 --ADVLKAK----------ILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAI 908 AD L + +++ EST+L+ + A + H+ + A L+ + + + Sbjct: 205 IIADTLPCQAAIDLAKNSCMMLCESTYLEQHRHL--AESHFHMTAKQAATLAKRAATQKL 262 Query: 909 LLIHFSARY 935 +L HFSARY Sbjct: 263 ILTHFSARY 271
>O51696:RNZ_BORBU Ribonuclease Z - Borrelia burgdorferi (Lyme disease spirochete)| Length = 319 Score = 38.5 bits (88), Expect = 0.055 Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 26/229 (11%) Frame = +3 Query: 330 ISHAHLDHIGGL---PMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHT 500 I+H H DHI GL M ++ G R P I P + + ++ + E+ + Sbjct: 60 ITHLHADHITGLLGIVMLMSQSGETRKEPLIIAGPVGIKNYTQANINMLKIYKNYEIIYK 119 Query: 501 LIPLDVGEE--YELRRDLKVRAFKTYHTIPSQGYVIYSVKQK------LKQDYLGLPGSE 656 I +D E+ YE + K+ K H+I GY ++ K K K + L +P Sbjct: 120 EIIIDKTEKIIYE-DKTKKIEYTKLKHSIECVGY-LFIEKDKPGKFNTEKAEELNIPKGP 177 Query: 657 IKRLKLSGVEI--TNTVTTP-----------EVAFTGDT--MSDFILDPDNADVLKAKIL 791 I++ G EI + P +VA+ DT + I N + ++ Sbjct: 178 IRKALQDGKEILVNGKIIKPSEILGKSKKGLKVAYITDTGYFKELIQQIKNFN-----LV 232 Query: 792 VMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYT 938 ++ESTF ++ + A + H+ AN+ + + LIHFS RYT Sbjct: 233 IIESTFKNELK--KEADKKLHLTAGGAANIVKQAKVLQTGLIHFSERYT 279
>Q7V5W1:RNZ_PROMM Ribonuclease Z - Prochlorococcus marinus (strain MIT 9313)| Length = 318 Score = 38.1 bits (87), Expect = 0.072 Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 12/119 (10%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRG---------LYRLRPPTIFVPKYLSELVERL---FDVH 467 +F+SH H DH+ GLP +A+ G LY P ++ L R+ VH Sbjct: 58 VFVSHMHGDHVFGLPGLLASLGLSGNSNGVDLYGPDPLESYLQGVLRNSSTRIGYPLKVH 117 Query: 468 RAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGL 644 R D +E N L V E+ +D+ VR H +P+ Y V+QK K + L Sbjct: 118 RVRDAAEQN-----LIVFED----KDILVRCTPLTHRVPAYA---YRVEQKPKPGHFNL 164
>Q892B5:RNZ_CLOTE Ribonuclease Z - Clostridium tetani| Length = 312 Score = 38.1 bits (87), Expect = 0.072 Identities = 52/228 (22%), Positives = 98/228 (42%), Gaps = 25/228 (10%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVATRG-LYRLRPPTIFVPKYLSELVERLF----DVHRAMDQ 482 D + I+H H DHI GLP +AT G R P TI P + E+++ L + ++ Sbjct: 55 DIICITHWHGDHIVGLPGLLATMGNSGRKEPLTIIGPVGIGEIIKGLTVIVPYIPYELNV 114 Query: 483 SELNHTLIPLDVGEEYEL---RRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGS 653 E + + +E L + ++ + + H+ P Y + VK+K K + + Sbjct: 115 IEATKESLCFTINKENLLLSSKGEIIINTLEVEHSSPCIAY-RFDVKRKPKFNLEKALDN 173 Query: 654 EIKRL------KLSGVEITNTVTTPEV-----------AFTGDTMSDFILDPDNADVLKA 782 ++ ++ + VE + + +F DT+ L P V K+ Sbjct: 174 KVPKVIWNLLQRGGNVEFEGNLYESSMVLGEERKGIKFSFVTDTLPIPELIP---FVKKS 230 Query: 783 KILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFS 926 +L+ ES + DS ++ A + H+ + A ++ E + ++L HFS Sbjct: 231 DLLICESNYGQDS-DVDKAIKNKHMTFSQAAQIAKSGEVKELILTHFS 277
>Q49WL3:Y1701_STAS1 UPF0036 protein SSP1701 - Staphylococcus saprophyticus subsp.| saprophyticus (strain ATCC 15305 / DSM 20229) Length = 620 Score = 37.7 bits (86), Expect = 0.094 Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 16/208 (7%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P Y L+ I VP Y L L + +++ L T Sbjct: 70 LFITHGHEDHIGGVP--------YLLK--QINVPIYGGPLALGL--IRNKLEEHHLLRTT 117 Query: 504 IPLDVGEEYELR-RDLKVRAFKTYHTIPS---------QGYVIYSVKQKLKQDYLGLPGS 653 +++ E ++ + +V + T H+IP +G ++++ K +G P + Sbjct: 118 ELIEIDESSVIKSKHFEVSFYLTTHSIPEAYGVIVNTPEGNIVHTGDFKFDFTPVGEPAN 177 Query: 654 EIKRLKLSGVEITNTVTTPEVAFTGDTMSDFILDPDNADVLKAKIL------VMESTFLD 815 K KL + ++ T + DF L KI ++ +TF Sbjct: 178 IAKMAKLGEEGVLCLLSDS----TNSLVPDFTLSEREVGQNVEKIFRNCSGRIIFATFAS 233 Query: 816 DSVSIEHAREYGHIHLFEIANLSDKFEN 899 + ++ A E H +I EN Sbjct: 234 NIYRVQQAVEAAIKHNRKIVTFGRSMEN 261
>Q7NDW3:RNZ_GLOVI Ribonuclease Z - Gloeobacter violaceus| Length = 317 Score = 37.4 bits (85), Expect = 0.12 Identities = 62/249 (24%), Positives = 101/249 (40%), Gaps = 22/249 (8%) Frame = +3 Query: 291 RCPQRAVSQDFLFISHAHLDHIGGLPMYVATR--GLYRLRPPTIFVPKYLSELVE---RL 455 R P R + +F +H H DH+ GL +A+R G P ++ P L E V R Sbjct: 47 RTPLRLSQLEKVFFTHLHGDHLFGLVGLLASRALGSAGTTPVKLYGPPGLQEYVRATLRY 106 Query: 456 FDVHRAMDQSELNHTLIPLDVGEEYELRRD-LKVRAFKTYHTIPSQGYVIYSVKQKLKQD 632 D H +N+ + V L + V A H I + GY + Q + D Sbjct: 107 SDTH-------INYPIHFQTVEPGLVLSEEGFTVLANALKHRISAFGYSVIEHDQPGRFD 159 Query: 633 -----YLGLPGSEIKRLKLSGVEIT---------NTVTTPEVAFTGDT-MSDFILDPDNA 767 LG+P + +G + T+ PE T SD I P Sbjct: 160 AERAAQLGIPFGPLYGQLKAGRTVALPDGRTVDGRTLVGPERKGRKLTYCSDTIYTPSAI 219 Query: 768 DV-LKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTE 944 ++ L A +L+ E+T+ + +++ A H A ++ + + R ++L HFS RY Sbjct: 220 ELALGADVLIHEATYCEADLNL--AERGLHSTAAMAARVAREAKVRQLILTHFSPRY--- 274 Query: 945 EIDAGISRL 971 +AG++ L Sbjct: 275 --EAGLAAL 281
>Q2YX35:Y955_STAAB UPF0036 protein SAB0955c - Staphylococcus aureus (strain bovine| RF122) Length = 565 Score = 37.0 bits (84), Expect = 0.16 Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 10/127 (7%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L +L P P L L+ + H + ++LN Sbjct: 70 LFITHGHEDHIGGVPFL-----LKQLNIPIYGGPLALG-LIRNKLEEHHLLRTAKLN--- 120 Query: 504 IPLDVGEEYELR-RDLKVRAFKTYHTIPS---------QGYVIYSVKQKLKQDYLGLPGS 653 ++ E+ ++ + L + + T H+IP +G V+++ K +G P + Sbjct: 121 ---EINEDSVIKSKHLTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPAN 177 Query: 654 EIKRLKL 674 K +L Sbjct: 178 IAKMAQL 184
>Q9V2F5:Y119_PYRAB UPF0173 protein PYRAB01190 - Pyrococcus abyssi| Length = 210 Score = 36.2 bits (82), Expect = 0.27 Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 6/133 (4%) Frame = +3 Query: 237 GHETCVIFPTLSLAFDIGRCPQ----RAVSQDFLFISHAHLDHIGGLPMYVATRGLYRLR 404 GH C + T ++ I P R D++ I+H H+DH G P+ + Sbjct: 7 GH-ACFLIKTKGVSILIDPYPDVDEDRMEKVDYILITHEHMDHYGKTPLIAKLNDAEVIG 65 Query: 405 PPTIFVPKYLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIP 584 P T+ YL + + L V ++ G+E +L D+ V+AF T H Sbjct: 66 PKTV----YLMAISDGLTKVRE-------------IEAGQEIQL-GDVTVKAFYTEHPTS 107 Query: 585 SQ--GYVIYSVKQ 617 GY+I K+ Sbjct: 108 QYPLGYLIIGDKR 120
>Q4L5A3:Y1863_STAHJ UPF0036 protein SH1863 - Staphylococcus haemolyticus (strain| JCSC1435) Length = 559 Score = 35.8 bits (81), Expect = 0.36 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 2/102 (1%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L ++ P P L L+ D H + + LN Sbjct: 70 LFITHGHEDHIGGVPYL-----LKQINVPIYGGPLALG-LIRNKLDEHNLLRNASLN--- 120 Query: 504 IPLDVGEEYELR-RDLKVRAFKTYHTIP-SQGYVIYSVKQKL 623 ++ E+ ++ + ++ + T H+IP + G +I + + K+ Sbjct: 121 ---EITEDSVIKSKHFEISFYLTTHSIPEAYGVIIDTPEGKI 159
>Q9YAV8:RNZ_AERPE Ribonuclease Z - Aeropyrum pernix| Length = 310 Score = 35.8 bits (81), Expect = 0.36 Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 32/244 (13%) Frame = +3 Query: 312 SQDFLFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVP-----KYLSELVERL-----FD 461 S D L I+H H DHI G+ + T L R P + +++SE +E F+ Sbjct: 56 SIDVLAITHPHGDHINGVAGLLMTMSLQSRRKPLTIISTSESLEFISETLEATRENLGFE 115 Query: 462 VHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGY-VIYSVKQKLKQDYL 638 V +D E LDVG R L + + H I S + ++++++ ++ L Sbjct: 116 V-MLVDARESG----VLDVGRPSGDR--LTIEWERACHNIESLAFKLVWTLRPRIDARIL 168 Query: 639 G----LPGSEIKRLKLSG-VEITNTVTTPE-----------VAFTGDT-----MSDFILD 755 G I+ L G + + T + VA+TGDT ++ F+ Sbjct: 169 ERLDLKAGPWIRELIEKGRAHVEGRIVTLKDISASGERKYSVAYTGDTSPCTRVAKFLHG 228 Query: 756 PDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARY 935 D IL+ +ST LD S++ E A E GH + A + + ++L H S+RY Sbjct: 229 SD--------ILIHDST-LDSSLARE-AAERGHSTSLDAARNALTSGAKLLILFHVSSRY 278 Query: 936 TTEE 947 + E Sbjct: 279 SGYE 282
>Q6PF24:PREP_XENLA Presequence protease, mitochondrial precursor - Xenopus laevis| (African clawed frog) Length = 1027 Score = 35.8 bits (81), Expect = 0.36 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 3/120 (2%) Frame = +3 Query: 423 PKYLSELVERLFDV--HRAM-DQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQG 593 PK+L + V++ F V HR M S + EE +L + +K + + I +G Sbjct: 476 PKFLQDKVKQYFQVNQHRMMLSMSPDEQHYDKEEQLEEEKLTQKVKALSEEERKQIYEKG 535 Query: 594 YVIYSVKQKLKQDYLGLPGSEIKRLKLSGVEITNTVTTPEVAFTGDTMSDFILDPDNADV 773 + S++ K QD+ LP LK+S +E +T E+A+ GD + P N V Sbjct: 536 LELISLQSK-PQDFSCLPA-----LKVSDIEPQIPLTDLEIAYAGDVPVQYCTQPTNGMV 589
>Q2FHZ1:Y989_STAA3 UPF0036 protein SAUSA300_0989 - Staphylococcus aureus (strain| USA300) Length = 565 Score = 35.4 bits (80), Expect = 0.47 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 10/127 (7%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L +L P P L L+ + H + ++LN Sbjct: 70 LFITHGHEDHIGGVPFL-----LKQLNIPIYGGPLALG-LIRNKLEEHHLLRTAKLN--- 120 Query: 504 IPLDVGEEYELR-RDLKVRAFKTYHTIPS---------QGYVIYSVKQKLKQDYLGLPGS 653 ++ E+ ++ + + + T H+IP +G V+++ K +G P + Sbjct: 121 ---EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPAN 177 Query: 654 EIKRLKL 674 K +L Sbjct: 178 IAKMAQL 184
>Q7A171:Y972_STAAW UPF0036 protein MW0972 - Staphylococcus aureus (strain MW2)| Length = 565 Score = 35.4 bits (80), Expect = 0.47 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 10/127 (7%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L +L P P L L+ + H + ++LN Sbjct: 70 LFITHGHEDHIGGVPFL-----LKQLNIPIYGGPLALG-LIRNKLEEHHLLRTAKLN--- 120 Query: 504 IPLDVGEEYELR-RDLKVRAFKTYHTIPS---------QGYVIYSVKQKLKQDYLGLPGS 653 ++ E+ ++ + + + T H+IP +G V+++ K +G P + Sbjct: 121 ---EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPAN 177 Query: 654 EIKRLKL 674 K +L Sbjct: 178 IAKMAQL 184
>Q7A682:Y940_STAAN UPF0036 protein SA0940 - Staphylococcus aureus (strain N315)| Length = 565 Score = 35.4 bits (80), Expect = 0.47 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 10/127 (7%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L +L P P L L+ + H + ++LN Sbjct: 70 LFITHGHEDHIGGVPFL-----LKQLNIPIYGGPLALG-LIRNKLEEHHLLRTAKLN--- 120 Query: 504 IPLDVGEEYELR-RDLKVRAFKTYHTIPS---------QGYVIYSVKQKLKQDYLGLPGS 653 ++ E+ ++ + + + T H+IP +G V+++ K +G P + Sbjct: 121 ---EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPAN 177 Query: 654 EIKRLKL 674 K +L Sbjct: 178 IAKMAQL 184
>Q5HGZ5:Y1098_STAAC UPF0036 protein SACOL1098 - Staphylococcus aureus (strain COL)| Length = 565 Score = 35.4 bits (80), Expect = 0.47 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 10/127 (7%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L +L P P L L+ + H + ++LN Sbjct: 70 LFITHGHEDHIGGVPFL-----LKQLNIPIYGGPLALG-LIRNKLEEHHLLRTAKLN--- 120 Query: 504 IPLDVGEEYELR-RDLKVRAFKTYHTIPS---------QGYVIYSVKQKLKQDYLGLPGS 653 ++ E+ ++ + + + T H+IP +G V+++ K +G P + Sbjct: 121 ---EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPAN 177 Query: 654 EIKRLKL 674 K +L Sbjct: 178 IAKMAQL 184
>Q99V09:Y1089_STAAM UPF0036 protein SAV1089 - Staphylococcus aureus (strain Mu50 / ATCC| 700699) Length = 565 Score = 35.4 bits (80), Expect = 0.47 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 10/127 (7%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L +L P P L L+ + H + ++LN Sbjct: 70 LFITHGHEDHIGGVPFL-----LKQLNIPIYGGPLALG-LIRNKLEEHHLLRTAKLN--- 120 Query: 504 IPLDVGEEYELR-RDLKVRAFKTYHTIPS---------QGYVIYSVKQKLKQDYLGLPGS 653 ++ E+ ++ + + + T H+IP +G V+++ K +G P + Sbjct: 121 ---EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPAN 177 Query: 654 EIKRLKL 674 K +L Sbjct: 178 IAKMAQL 184
>Q6GHZ6:Y1063_STAAR UPF0036 protein SAR1063 - Staphylococcus aureus (strain MRSA252)| Length = 565 Score = 35.4 bits (80), Expect = 0.47 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 10/127 (7%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L +L P P L L+ + H + ++LN Sbjct: 70 LFITHGHEDHIGGVPFL-----LKQLNIPIYGGPLALG-LIRNKLEEHHLLRTAKLN--- 120 Query: 504 IPLDVGEEYELR-RDLKVRAFKTYHTIPS---------QGYVIYSVKQKLKQDYLGLPGS 653 ++ E+ ++ + + + T H+IP +G V+++ K +G P + Sbjct: 121 ---EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPAN 177 Query: 654 EIKRLKL 674 K +L Sbjct: 178 IAKMAQL 184
>Q2FZG9:Y1035_STAA8 UPF0036 protein SAOUHSC_01035 - Staphylococcus aureus (strain NCTC| 8325) Length = 565 Score = 35.4 bits (80), Expect = 0.47 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 10/127 (7%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L +L P P L L+ + H + ++LN Sbjct: 70 LFITHGHEDHIGGVPFL-----LKQLNIPIYGGPLALG-LIRNKLEEHHLLRTAKLN--- 120 Query: 504 IPLDVGEEYELR-RDLKVRAFKTYHTIPS---------QGYVIYSVKQKLKQDYLGLPGS 653 ++ E+ ++ + + + T H+IP +G V+++ K +G P + Sbjct: 121 ---EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPAN 177 Query: 654 EIKRLKL 674 K +L Sbjct: 178 IAKMAQL 184
>Q6GAC5:Y1024_STAAS UPF0036 protein SAS1024 - Staphylococcus aureus (strain MSSA476)| Length = 565 Score = 35.4 bits (80), Expect = 0.47 Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 10/127 (7%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L +L P P L L+ + H + ++LN Sbjct: 70 LFITHGHEDHIGGVPFL-----LKQLNIPIYGGPLALG-LIRNKLEEHHLLRTAKLN--- 120 Query: 504 IPLDVGEEYELR-RDLKVRAFKTYHTIPS---------QGYVIYSVKQKLKQDYLGLPGS 653 ++ E+ ++ + + + T H+IP +G V+++ K +G P + Sbjct: 121 ---EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPAN 177 Query: 654 EIKRLKL 674 K +L Sbjct: 178 IAKMAQL 184
>Q9HJ19:RNZ_THEAC Ribonuclease Z - Thermoplasma acidophilum| Length = 307 Score = 35.0 bits (79), Expect = 0.61 Identities = 59/254 (23%), Positives = 100/254 (39%), Gaps = 30/254 (11%) Frame = +3 Query: 279 FDIGRCPQRAVSQ--------DFLFISHAHLDHIGGLPMYVATRGL-YRLRPPTIFVPKY 431 FD G Q+ + + D +FI+H H DH GL V + R + IF P Sbjct: 37 FDCGEGTQKQIMKSSTSFMDIDNIFITHFHGDHFLGLLGLVQSMSFNNRTKQLNIFGPHG 96 Query: 432 LSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSV 611 +++ +V L + L+ Y+L + L +R H +P+ + YS+ Sbjct: 97 AIKILSNALNVGYYTLHFPLK--IYELEPDRTYDLGKFL-IRTMLNDHPVPA---LSYSI 150 Query: 612 KQK-------LKQDYLGLPGSEIKRLKLSG--VEITNTVTTPEVA----------FTGDT 734 +++ K +P I++++ +G V N ++A +TGDT Sbjct: 151 EERDLVRIDPEKAREKNIPSRIIEKIRENGSYVYKGNEYRIDDIAGGVRKGRRIVYTGDT 210 Query: 735 --MSDFILDPDNADVLKAKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAI 908 M I NADVL + T D S E+GH + A ++ + + Sbjct: 211 RPMDRMIEFARNADVL------IHDTTTDSSFE-PMVNEFGHSSSRQAARIARQARVGRL 263 Query: 909 LLIHFSARYTTEEI 950 L H+S R T + Sbjct: 264 YLYHYSPRITDTSV 277
>Q82BX8:RNZ_STRAW Ribonuclease Z - Streptomyces avermitilis| Length = 301 Score = 34.7 bits (78), Expect = 0.80 Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 7/107 (6%) Frame = +3 Query: 639 GLPGSEIKRLKLSGV-------EITNTVTTPEVAFTGDTMSDFILDPDNADVLKAKILVM 797 G+ G ++ R++ G +++ AF DT + + +A +LV+ Sbjct: 167 GIKGPDVGRIQREGAIGGVSLEDVSEVRHGQRFAFVMDTR---LCEGVHALAEGCDMLVI 223 Query: 798 ESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYT 938 ESTFLD + A ++GH+ + ++ R ++L HFS RY+ Sbjct: 224 ESTFLDGDHQL--AEDHGHLTAGQAGRVAKDAGVRHLVLTHFSQRYS 268
>Q97IQ6:RNZ_CLOAB Ribonuclease Z - Clostridium acetobutylicum| Length = 309 Score = 34.3 bits (77), Expect = 1.0 Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 23/233 (9%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLP---MYVATRGLYRLRPPTIFVPKYLSELVERLFDV----HRAM 476 D + +H H DH+ GL + +A G R+ P TI P+ L E+V+ L V + Sbjct: 55 DVICFTHYHADHVMGLTGLLLTIANSG--RIDPLTIIGPEGLREVVKGLTVVAPFFPYEI 112 Query: 477 DQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSE 656 + EL+ + + +++ D+++ A H+I Y + V +K K D +E Sbjct: 113 ELIELDSKCSDNFLDKVFKI-EDVEIFALPVDHSIECLSYSV-RVNRKRKFDVNKAKANE 170 Query: 657 IKRLKL-----SGVEIT--NTVTTPEVAFTGDTMS----DFILDPDNADVL-----KAKI 788 + LK+ G EIT N + P++ G++ + D D L K+ + Sbjct: 171 VP-LKIWNELQRGKEITYENKLYVPDMVL-GESRKGIKITYCTDTRPVDSLHKFAYKSDL 228 Query: 789 LVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYTTEE 947 V E + ++ E A + H+ E A ++ E + + L HFS + E Sbjct: 229 FVCEGMYGEEEKK-EKAVDKKHMIFSEAAGIAKAAEVKELWLTHFSPALSEPE 280
>P28607:ARS_ALTCA Arylsulfatase precursor - Alteromonas carrageenovora| (Pseudoalteromonas carrageenovora) Length = 328 Score = 34.3 bits (77), Expect = 1.0 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVATRGLYRLRPP-TIFVPKYLSELVERLFDVHRAMDQSELN 494 D +F+SH H DH GGLP ++ R R ++ P + V+ +F+ M L Sbjct: 84 DAVFLSHLHFDHTGGLPAILSLRWQTSARNELVVYGPPGTQQTVDGIFEY---MTYGTLG 140 Query: 495 HTLIP 509 H +P Sbjct: 141 HYGVP 145
>Q6CUI5:YSH1_KLULA Endoribonuclease YSH1 - Kluyveromyces lactis (Yeast) (Candida| sphaerica) Length = 764 Score = 33.9 bits (76), Expect = 1.4 Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 8/172 (4%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVATRGLYR----LRPPTIFVPKYLSELVERLFDVHRAMDQS 485 D L ISH HLDH LP YV R +R + PT + ++L ++ + + Q Sbjct: 67 DLLLISHFHLDHAASLP-YVMQRTNFRGRVFMTHPTKAIYRWLLNDFVKVTSIGDSPGQD 125 Query: 486 ELNHTLI-PLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLG-LPGSEI 659 N L D+ E ++ ++ + T+ G K + G + G+ + Sbjct: 126 SSNDNLYSDEDLAESFD-----RIETIDYHSTMEVNGI-------KFTAFHAGHVLGAAM 173 Query: 660 KRLKLSGVEITNTVTTPEVAFTGDTMSDFILDPDNADV--LKAKILVMESTF 809 +++++GV V FTGD + ++A+V + ++++ESTF Sbjct: 174 FQIEIAGV---------RVLFTGDYSREVDRHLNSAEVPPQSSDVIIVESTF 216
>Q6FUA5:YSH1_CANGA Endoribonuclease YSH1 - Candida glabrata (Yeast) (Torulopsis| glabrata) Length = 771 Score = 33.9 bits (76), Expect = 1.4 Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 6/170 (3%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVAT---RGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSE 488 D L ISH HLDH LP + +G + PT + ++L R+ + +E Sbjct: 63 DVLLISHFHLDHAASLPYVMQKTNFKGRVFMTHPTKAIYRWLLRDFVRVTSIGSQSSNAE 122 Query: 489 LNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLG-LPGSEIKR 665 ++ D+ E ++ K+ + I G K + G + G+ + + Sbjct: 123 DDNLYSNEDLIESFD-----KIETIDYHSMIDVNGI-------KFTAFHAGHVLGAAMFQ 170 Query: 666 LKLSGVEITNTVTTPEVAFTGDTMSDFILDPDNADV--LKAKILVMESTF 809 ++++G+ V FTGD + ++A+V L + IL++ESTF Sbjct: 171 IEIAGL---------RVLFTGDYSREIDRHLNSAEVPPLPSDILIVESTF 211
>Q503E1:INT11_DANRE Integrator complex subunit 11 - Danio rerio (Zebrafish)| (Brachydanio rerio) Length = 598 Score = 33.9 bits (76), Expect = 1.4 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 10/118 (8%) Frame = +3 Query: 258 FPTLSLAFDIGRCPQRAVSQDFLFISHAHLDHIGGLPMYVATRG----LYRLRPPTIFVP 425 FP S GR + D + ISH HLDH G LP G +Y P P Sbjct: 45 FPDFSYITQNGRLTEFL---DCVIISHFHLDHCGALPYMSEMVGYDGPIYMTHPTKAICP 101 Query: 426 KYLSEL----VERLFDVHRAMDQ--SELNHTLIPLDVGEEYELRRDLKVRAFKTYHTI 581 L + V++ + + Q + ++PL++ + ++ +L+++A+ H + Sbjct: 102 ILLEDFRKITVDKKGETNFFTSQMIKDCMKKVVPLNLHQTVQVDDELEIKAYYAGHVL 159
>Q8CT16:Y787_STAES UPF0036 protein SE_0787 - Staphylococcus epidermidis (strain ATCC| 12228) Length = 560 Score = 33.5 bits (75), Expect = 1.8 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L ++ P P L L+ + H + +EL+ Sbjct: 70 LFITHGHEDHIGGVPFL-----LKQINVPIYGGPLALG-LIRNKLEEHHLLRTTELH--- 120 Query: 504 IPLDVGEEYELR-RDLKVRAFKTYHTIPSQGYVI 602 ++ E ++ + ++ + T H+IP VI Sbjct: 121 ---EIDESSVIKSKHFEISFYLTTHSIPEAYGVI 151
>Q5HQ80:Y676_STAEQ UPF0036 protein SERP0676 - Staphylococcus epidermidis (strain ATCC| 35984 / RP62A) Length = 560 Score = 33.5 bits (75), Expect = 1.8 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 1/94 (1%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSELNHTL 503 LFI+H H DHIGG+P L ++ P P L L+ + H + +EL+ Sbjct: 70 LFITHGHEDHIGGVPFL-----LKQINVPIYGGPLALG-LIRNKLEEHHLLRTTELH--- 120 Query: 504 IPLDVGEEYELR-RDLKVRAFKTYHTIPSQGYVI 602 ++ E ++ + ++ + T H+IP VI Sbjct: 121 ---EIDESSVIKSKHFEISFYLTTHSIPEAYGVI 151
>Q55132:RNZ_SYNY3 Ribonuclease Z - Synechocystis sp. (strain PCC 6803)| Length = 326 Score = 33.5 bits (75), Expect = 1.8 Identities = 55/228 (24%), Positives = 100/228 (43%), Gaps = 24/228 (10%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLYRL-RPPTIFVPKYLSELVE---RLFDVHRAMDQSEL 491 +FI+H H DHI GL +A+ GL + I+ P+ L + +E R H + + Sbjct: 58 IFITHLHGDHIFGLMGLLASSGLAGSGQGIEIYGPEGLGDYLEACCRFSSTH--LGKRLK 115 Query: 492 NHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVI--------YSVKQKLKQDYLGLP 647 HT+ + G YE +D +V H IP+ GY + ++V+Q + LG+P Sbjct: 116 VHTV--RENGLIYE-DKDFQVHCGLLKHRIPAYGYRVEEKQRPGRFNVEQ---AEALGIP 169 Query: 648 ----GSEIKRLKLSGVEITNTVTTPEVAFTGDTMSDFILDPDN-------ADVLKAKILV 794 ++K+ K +E + ++ + F+ D A +A +LV Sbjct: 170 FGPIYGQLKQGKTVTLEDGRRIRGQDLCEPPEPGRKFVYCTDTVFCEEAIALAQEADLLV 229 Query: 795 MESTFLDDSVSIEHAREYGHIHL-FEIANLSDKFENRAILLIHFSARY 935 E+TF + R + + ++A L++ + +++ HFS RY Sbjct: 230 HEATFAHQDAQLAFDRLHSTSTMAAQVALLANV---KQLIMTHFSPRY 274
>O57860:Y120_PYRHO UPF0173 protein PH0120 - Pyrococcus horikoshii| Length = 211 Score = 33.1 bits (74), Expect = 2.3 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 6/133 (4%) Frame = +3 Query: 237 GHETCVIFPTLSLAFDIGRCPQ----RAVSQDFLFISHAHLDHIGGLPMYVATRGLYRLR 404 GH C + T ++ I P R D++ I+H H+DH G P+ + Sbjct: 7 GH-ACFLVKTKGVSILIDPYPDVDEDRMEKVDYILITHEHMDHYGKTPLIAKLNDAEVIG 65 Query: 405 PPTIFVPKYLSELVERLFDVHRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIP 584 P T+ YL + + L V ++ +E++L D+ V+ F T H Sbjct: 66 PKTV----YLMAISDGLTKVRE-------------VEADQEFQL-GDVTVKTFYTEHPTS 107 Query: 585 SQ--GYVIYSVKQ 617 GY+I K+ Sbjct: 108 QYPLGYLILGEKR 120
>Q7V0B9:RNZ_PROMP Ribonuclease Z - Prochlorococcus marinus subsp. pastoris (strain| CCMP 1378 / MED4) Length = 312 Score = 33.1 bits (74), Expect = 2.3 Identities = 57/236 (24%), Positives = 85/236 (36%), Gaps = 31/236 (13%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRGLY-RLRPPTIFVPKYLSELVERLFD-----------VH 467 +FI+H H DHI GLP +AT GL I+ P L V + Sbjct: 58 IFITHMHGDHIYGLPGLLATLGLSGNSNGIEIYGPSELKSFVTSALESSFCKLSFPLRFR 117 Query: 468 RAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLP 647 D + LN L D LKV H +P+ G Y V +K K + Sbjct: 118 AVEDFASLNKILFEND---------KLKVHCACLKHRLPAYG---YRVSEKDKPGVFDIK 165 Query: 648 GSEIKRLK----LSGVEITNTVTTPE-VAFTGDTM-------------SDFILDPDNADV 773 +E + S ++ TV + +F G +D + ++ Sbjct: 166 KAEDSNIPPGPIYSELQAGKTVQLKDGRSFNGQDFCGPPRKGESFVYCTDTVFSKSAVNL 225 Query: 774 LK-AKILVMESTFLDDSVSIEHAREYGHIHLFEIANLSDKFENRAILLIHFSARYT 938 K A +LV ESTF + + A E H A + + +++ H S RYT Sbjct: 226 SKNADLLVHESTFSKEDEKM--AYEKLHSTTIMAAKTALLSNVKKLIITHLSPRYT 279
>Q60355:Y047_METJA Uncharacterized protein MJ0047 - Methanococcus jannaschii| Length = 428 Score = 32.7 bits (73), Expect = 3.0 Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 17/183 (9%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVATRGLYRLRPPTIFVPKYLSELVERLFDV----------- 464 D +FISHAHLDH G LP+ + + VP +EL ++L V Sbjct: 51 DKVFISHAHLDHSGALPVLFHRK---------MDVPVITTELSKKLIKVLLKDMVKIAET 101 Query: 465 ------HRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLK 626 + D E IPL+ ++ + +D F H IP ++ + + Sbjct: 102 ENKKIPYNNHDVKEAIRHTIPLNYNDK-KYYKDFSYELFSAGH-IPGSASILLNYQNNKT 159 Query: 627 QDYLGLPGSEIKRLKLSGVEITNTVTTPEVAFTGDTMSDFILDPDNADVLKAKILVMEST 806 Y G +KL +T ++++T D + I++ + + +E + Sbjct: 160 ILYTG-------DVKLRDTRLTKGA---DLSYTKDDIDILIIESTYGNSIHPDRKAVELS 209 Query: 807 FLD 815 F++ Sbjct: 210 FIE 212
>O13794:YSH1_SCHPO Endoribonuclease ysh1 - Schizosaccharomyces pombe (Fission yeast)| Length = 775 Score = 32.3 bits (72), Expect = 3.9 Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 5/104 (4%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVAT---RGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSE 488 D L ISH HLDH+ LP + RG + PT V K+L ++ +V + Sbjct: 90 DVLLISHFHLDHVASLPYVMQKTNFRGRVFMTHPTKAVCKWLLSDYVKVSNVGMEDQLYD 149 Query: 489 LNHTLIPLDVGEEYELRRDLKVRA--FKTYHTIPSQGYVIYSVK 614 L D E + ++V F YH G +Y V+ Sbjct: 150 EKDLLAAFDRIEAVDYHSTIEVEGIKFTPYHAGHVLGACMYFVE 193
>Q8WZS6:YSH1_NEUCR Endoribonuclease ysh-1 - Neurospora crassa| Length = 850 Score = 31.6 bits (70), Expect = 6.7 Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 8/172 (4%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYVAT---RGLYRLRPPTIFVPKYLSELVERLFDVHRAMDQSE 488 D L ISH H+DH LP +A RG + T + K+L + R+ + + QS Sbjct: 77 DVLLISHFHIDHAASLPYVLAKTNFRGRVFMTHATKAIYKWLIQDSVRVGNT-SSNPQSS 135 Query: 489 LNHTLIPLDVGEEYELRRDLKVRA--FKTYHTIPSQGYVIYSVKQKLKQDYLGLPGSEIK 662 L +T EE L+ + A + T HTI S Y L G+ + Sbjct: 136 LVYT-------EEDHLKTFPMIEAIDYNTTHTISSIRITPYPAGHVL--------GAAMF 180 Query: 663 RLKLSGVEITNTVTTPEVAFTGDTMSD---FILDPDNADVLKAKILVMESTF 809 ++++G++I FTGD + ++ +K +L+ EST+ Sbjct: 181 LIEIAGLKI---------FFTGDYSREEDRHLISAKVPKGVKIDVLITESTY 223
>Q58633:Y1236_METJA Uncharacterized protein MJ1236 - Methanococcus jannaschii| Length = 634 Score = 31.6 bits (70), Expect = 6.7 Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 8/172 (4%) Frame = +3 Query: 318 DFLFISHAHLDHIG---GLPMYVATRGLYRLRPP----TIFVPKYLSELVERLFDV-HRA 473 D + ++HAHLDH G GL Y +Y RP T+ YL + +V + + Sbjct: 234 DAVIVTHAHLDHCGFIPGLFRYGYDGPVYCTRPTRDLMTLLQKDYLEIAKKEGKEVPYTS 293 Query: 474 MDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGYVIYSVKQKLKQDYLGLPGS 653 D IP+D G ++ +K+ T+ + G+V+ GS Sbjct: 294 KDIKTCVKHTIPIDYGVTTDISPTIKL-------TLHNAGHVL---------------GS 331 Query: 654 EIKRLKLSGVEITNTVTTPEVAFTGDTMSDFILDPDNADVLKAKILVMESTF 809 I L + G + N T ++ F + +L+P + + L++EST+ Sbjct: 332 AIAHLHI-GEGLYNLAYTGDIKFE----TSRLLEPAVCQFPRLETLIIESTY 378
>P07601:TRPA_BACSU Tryptophan synthase alpha chain - Bacillus subtilis| Length = 267 Score = 31.6 bits (70), Expect = 6.7 Identities = 24/75 (32%), Positives = 39/75 (52%) Frame = -2 Query: 1034 YLSLISDALFQRIDSA*ERRRQSTYPCINFLCRITSRKVN**NGSVFKLIREIRNLKQVY 855 Y+SL++ R+ + E+ Y C++ L R N N SV+ IR ++NL V Sbjct: 144 YISLVAPTSESRLKTIIEQAEGFVY-CVSSLGVTGVR--NEFNSSVYPFIRTVKNLSTVP 200 Query: 854 VPIFSCMLNRDRVIK 810 V + + NR++VIK Sbjct: 201 VAVGFGISNREQVIK 215
>Q8KZ93:TRPA_BACNA Tryptophan synthase alpha chain - Bacillus subtilis subsp. natto| Length = 267 Score = 31.6 bits (70), Expect = 6.7 Identities = 24/75 (32%), Positives = 39/75 (52%) Frame = -2 Query: 1034 YLSLISDALFQRIDSA*ERRRQSTYPCINFLCRITSRKVN**NGSVFKLIREIRNLKQVY 855 Y+SL++ R+ + E+ Y C++ L R N N SV+ IR ++NL V Sbjct: 144 YISLVAPTSESRLKTIIEQAEGFVY-CVSSLGVTGVR--NEFNSSVYPFIRTVKNLSTVP 200 Query: 854 VPIFSCMLNRDRVIK 810 V + + NR++VIK Sbjct: 201 VAVGFGISNREQVIK 215
>Q7U8S4:RNZ_SYNPX Ribonuclease Z - Synechococcus sp. (strain WH8102)| Length = 319 Score = 31.6 bits (70), Expect = 6.7 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 13/104 (12%) Frame = +3 Query: 324 LFISHAHLDHIGGLPMYVATRG----------LYRLRPPTIFVPKYLSELVERL---FDV 464 +F++H H DH+ GLP +A+ G LY P F+ L+ R+ V Sbjct: 58 VFVTHMHGDHVFGLPGLLASLGLSGSCQDGVDLYGPDPLESFLKGALNTSSTRIGYPLQV 117 Query: 465 HRAMDQSELNHTLIPLDVGEEYELRRDLKVRAFKTYHTIPSQGY 596 HR+ +E L D +L VR H +P+ Y Sbjct: 118 HRSRPAAEQGTLLFEDD---------ELTVRCTPLTHRVPAYAY 152
>Q5SW25:PO122_MOUSE POM121-like protein 2 - Mus musculus (Mouse)| Length = 972 Score = 31.6 bits (70), Expect = 6.7 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = +2 Query: 140 GPSSSRPLPSRKAQGEAPAGNRGVPRGGHLHRRARDVRHLPDAEPRLRHRP 292 G S P R GE PA R +HR V+H+ A+P RHRP Sbjct: 9 GSSPRSPAQGRADSGEKPASRRPARPLYQVHR----VQHVHRAQPARRHRP 55
>Q9QXK7:CPSF3_MOUSE Cleavage and polyadenylation specificity factor subunit 3 - Mus| musculus (Mouse) Length = 684 Score = 31.6 bits (70), Expect = 6.7 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 13/40 (32%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYV-------------ATRGLYR 398 D L ISH HLDH G LP ++ AT+ +YR Sbjct: 65 DLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYR 104
>Q9UKF6:CPSF3_HUMAN Cleavage and polyadenylation specificity factor subunit 3 - Homo| sapiens (Human) Length = 684 Score = 31.6 bits (70), Expect = 6.7 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 13/40 (32%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYV-------------ATRGLYR 398 D L ISH HLDH G LP ++ AT+ +YR Sbjct: 65 DLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYR 104
>P79101:CPSF3_BOVIN Cleavage and polyadenylation specificity factor subunit 3 - Bos| taurus (Bovine) Length = 684 Score = 31.6 bits (70), Expect = 6.7 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 13/40 (32%) Frame = +3 Query: 318 DFLFISHAHLDHIGGLPMYV-------------ATRGLYR 398 D L ISH HLDH G LP ++ AT+ +YR Sbjct: 65 DLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYR 104
>P61702:SYA_LACJO Alanyl-tRNA synthetase - Lactobacillus johnsonii| Length = 882 Score = 31.2 bits (69), Expect = 8.8 Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +3 Query: 438 ELVERLFDVHRAMDQSELNHT--LIPLDVGEEYELRRDLK-VRAFKTYHT 578 ELV R+ DV A + L+ ++PL+ G+EY L+ D K R K HT Sbjct: 520 ELVARVTDVQHAPNDQNLHFVDVILPLEKGQEYVLKVDQKRRRGLKHNHT 569
>Q65S49:PROA_MANSM Gamma-glutamyl phosphate reductase - Mannheimia succiniciproducens| (strain MBEL55E) Length = 419 Score = 31.2 bits (69), Expect = 8.8 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 10/94 (10%) Frame = +3 Query: 684 EITNTVTTPEVAFTGDTMSDFILDPDNADVLKAKILVMESTFLDDSVSI----------E 833 ++ + T EV F D+ + IL +ADV + + +L +++ E Sbjct: 274 KLARRLKTKEVKFHADSTALSILQGVSADVKPVTEQQLRNEWLTYDLNVVIVKGIEEAVE 333 Query: 834 HAREYGHIHLFEIANLSDKFENRAILLIHFSARY 935 H REYG H I S K N+ + + +A Y Sbjct: 334 HIREYGSEHSESILTESQKLANQFVAQVDAAAVY 367 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 181,701,955 Number of extensions: 3831725 Number of successful extensions: 11253 Number of sequences better than 10.0: 139 Number of HSP's gapped: 11167 Number of HSP's successfully gapped: 140 Length of query: 396 Length of database: 100,686,439 Length adjustment: 115 Effective length of query: 281 Effective length of database: 69,142,514 Effective search space: 19429046434 Effective search space used: 19429046434 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
