| Clone Name | FLbaf52d09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001056704.1| Oryza sativa (japonica cultivar-group) Os03g0363900 (Os03g0363900) mRNA, complete cds Length = 1615 Score = 904 bits (456), Expect = 0.0 Identities = 828/952 (86%) Strand = Plus / Plus Query: 56 gggatggacgtgccgtggctgctggtggcgcacggggcggtgacggcgctggtggttgtg 115 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 167 gggatggacgtgccgtggctgctggtggcgcacgggtcggtgacggcgctggtggtggtg 226 Query: 116 tcgtttctctgcgggcagtggcccatcttcgagggcaccttcgttcagagcatcaaccac 175 || || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 227 tccttcctctgcgggcagtggcccatcttcgagggcaccttcgtgcagcgcatcaaccac 286 Query: 176 ttcctcacctccggcgcttaccgccactttctgcggctcgtgcaggcggcgtgcggtacc 235 |||||||||| |||||| |||| |||| | ||||||||||| || ||||||||||| | Sbjct: 287 ttcctcaccttcggcgcctaccaccacctcctgcggctcgtccacgcggcgtgcggcaat 346 Query: 236 ggagccagggatctcgtgctcggcgtcgagcagtactgctgcgaccgccctaaccctatc 295 || |||||||||||||| |||||||||||| |||||||||||||| || ||||| ||| Sbjct: 347 ggggccagggatctcgtcctcggcgtcgagagctactgctgcgaccggcccaacccgatc 406 Query: 296 ctgcaggttttttatgttgccataattggtggaacatattctataatagtgcagtcatct 355 |||||| ||||||| ||||||||||| || | |||||||| |||||| || ||| ||||| Sbjct: 407 ctgcagattttttacgttgccataataggggtaacatattttataatcgtccagacatct 466 Query: 356 ttcaagtacattcctgggtattacgtgagtgtattgcacaggtacctgagcattgtggtt 415 ||| |||||||||||||||| || ||||||| | ||||||| |||||||| || |||| | Sbjct: 467 ttccagtacattcctgggtactatgtgagtggactgcacagatacctgagtatcgtggct 526 Query: 416 gtttctattggtgctatactctttgtcctcactagcttttctgatcctgggactgttact 475 ||| ||||||||||| ||||||| || || |||||||||||||||||||| ||||| ||| Sbjct: 527 gttgctattggtgctttactcttcgtgctgactagcttttctgatcctggaactgtcact 586 Query: 476 tctgagaatgtgtctcattatgtatctgcctatccttttgacaacattatttatgtagag 535 |||||||||| ||||| ||| ||||||||||||| | ||| ||| |||| || ||| Sbjct: 587 gctgagaatgtttctcaatatctatctgcctatccatatgatggcatcatttttgaggag 646 Query: 536 aaagaatgttcaacatgcaagattaccagaccagctagggcaaagcattgcagaatatgt 595 ||||| ||||| || ||||||||| |||| ||||| ||||||||||| || ||||||||| Sbjct: 647 aaagagtgttctacctgcaagattgccaggccagccagggcaaagcactgtagaatatgt 706 Query: 596 gatagatgtgtagctcgatttgatcaccactgtggatggatgaataattgcattggggag 655 |||| |||||| || || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 707 gataaatgtgttgcacggtttgatcaccactgtggatggatgaataactgcattggggag 766 Query: 656 aagaatactcgctattttgtggcatttttagtttggcattttcttttatgtctgtatgga 715 || |||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||| Sbjct: 767 aaaaatactcgctattttgtggcctttttagtttggcatttccttatatgtctgtacgga 826 Query: 716 gcaattatacttggcttcattgttgctggtgaattaaaagacaagaaagttgtctacata 775 || |||| ||||| |||||| ||||||||||||||||||| | |||||||||||||||| Sbjct: 827 gcggttattcttggtttcattcttgctggtgaattaaaagaaaggaaagttgtctacata 886 Query: 776 ctgacagtttattacggcattgataattcattctctggcctgtttccccatgttgcacag 835 ||||||||||||| ||||| || |||||||||||||| || ||||| |||||||||||| Sbjct: 887 ttgacagtttattatggcatcgacaattcattctctgggctatttccacatgttgcacag 946 Query: 836 tggttgcttgctgtccataacacacagatacttttggctgtatttttgggtataatagca 895 ||| |||||||||| ||||||||||||||||| || || || ||||||| |||||| ||| Sbjct: 947 tggctgcttgctgtgcataacacacagatactcttagcggtctttttggctataattgca 1006 Query: 896 ttgcttcttgggggtttttgtgcgtatcatgtacatctttgcttatccaacacgactaca 955 ||||| ||||| || |||||||| || || ||||||||||||| | || || || || Sbjct: 1007 ttgctccttggtgggttttgtgcttaccacacacatctttgcttaacaaatacaacaacg 1066 Query: 956 aacgagacattcaaatggcaagattacgttttctggatgaaaaaggagaacg 1007 || |||||||||||||||||||| || || | |||| |||||||| ||||| Sbjct: 1067 aatgagacattcaaatggcaagactatattatgtggaggaaaaaggtgaacg 1118 Score = 46.1 bits (23), Expect = 0.35 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1070 aaatcaccaccaagcaaatggaagacgttcttctc 1104 ||||| |||||||||||||||||| |||| ||||| Sbjct: 1151 aaatcgccaccaagcaaatggaaggcgtttttctc 1185
>dbj|AK066313.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065E23, full insert sequence Length = 1616 Score = 896 bits (452), Expect = 0.0 Identities = 827/952 (86%) Strand = Plus / Plus Query: 56 gggatggacgtgccgtggctgctggtggcgcacggggcggtgacggcgctggtggttgtg 115 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 168 gggatggacgtgccgtggctgctggtggcgcacgggtcggtgacggcgctggtggtggtg 227 Query: 116 tcgtttctctgcgggcagtggcccatcttcgagggcaccttcgttcagagcatcaaccac 175 || || |||||||||||||||||||||||||||||||||||||| ||| || |||||||| Sbjct: 228 tccttcctctgcgggcagtggcccatcttcgagggcaccttcgtgcagcgcgtcaaccac 287 Query: 176 ttcctcacctccggcgcttaccgccactttctgcggctcgtgcaggcggcgtgcggtacc 235 |||||||||| |||||| |||| |||| | ||||||||||| || ||||||||||| | Sbjct: 288 ttcctcaccttcggcgcctaccaccacctcctgcggctcgtccacgcggcgtgcggcaat 347 Query: 236 ggagccagggatctcgtgctcggcgtcgagcagtactgctgcgaccgccctaaccctatc 295 || |||||||||||||| |||||||||||| |||||||||||||| || ||||| ||| Sbjct: 348 ggggccagggatctcgtcctcggcgtcgagagctactgctgcgaccggcccaacccgatc 407 Query: 296 ctgcaggttttttatgttgccataattggtggaacatattctataatagtgcagtcatct 355 |||||| ||||||| ||||||||||| || | |||||||| |||||| || ||| ||||| Sbjct: 408 ctgcagattttttacgttgccataataggggtaacatattttataatcgtccagacatct 467 Query: 356 ttcaagtacattcctgggtattacgtgagtgtattgcacaggtacctgagcattgtggtt 415 ||| |||||||||||||||| || ||||||| | ||||||| |||||||| || |||| | Sbjct: 468 ttccagtacattcctgggtactatgtgagtggactgcacagatacctgagtatcgtggct 527 Query: 416 gtttctattggtgctatactctttgtcctcactagcttttctgatcctgggactgttact 475 ||| ||||||||||| ||||||| || || |||||||||||||||||||| ||||| ||| Sbjct: 528 gttgctattggtgctttactcttcgtgctgactagcttttctgatcctggaactgtcact 587 Query: 476 tctgagaatgtgtctcattatgtatctgcctatccttttgacaacattatttatgtagag 535 |||||||||| ||||| ||| ||||||||||||| | ||| ||| |||| || ||| Sbjct: 588 gctgagaatgtttctcaatatctatctgcctatccatatgatggcatcatttttgaggag 647 Query: 536 aaagaatgttcaacatgcaagattaccagaccagctagggcaaagcattgcagaatatgt 595 ||||| ||||| || ||||||||| |||| ||||| ||||||||||| || ||||||||| Sbjct: 648 aaagagtgttctacctgcaagattgccaggccagccagggcaaagcactgtagaatatgt 707 Query: 596 gatagatgtgtagctcgatttgatcaccactgtggatggatgaataattgcattggggag 655 |||| |||||| || || ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 708 gataaatgtgttgcacggtttgatcaccactgtggatggatgaataactgcattggggag 767 Query: 656 aagaatactcgctattttgtggcatttttagtttggcattttcttttatgtctgtatgga 715 || |||||||||||||||||||| ||||||||||||||||| ||| |||||||||| ||| Sbjct: 768 aaaaatactcgctattttgtggcctttttagtttggcatttccttatatgtctgtacgga 827 Query: 716 gcaattatacttggcttcattgttgctggtgaattaaaagacaagaaagttgtctacata 775 || |||| ||||| |||||| ||||||||||||||||||| | |||||||||||||||| Sbjct: 828 gcggttattcttggtttcattcttgctggtgaattaaaagaaaggaaagttgtctacata 887 Query: 776 ctgacagtttattacggcattgataattcattctctggcctgtttccccatgttgcacag 835 ||||||||||||| ||||| || |||||||||||||| || ||||| |||||||||||| Sbjct: 888 ttgacagtttattatggcatcgacaattcattctctgggctatttccacatgttgcacag 947 Query: 836 tggttgcttgctgtccataacacacagatacttttggctgtatttttgggtataatagca 895 ||| |||||||||| ||||||||||||||||| || || || ||||||| |||||| ||| Sbjct: 948 tggctgcttgctgtgcataacacacagatactcttagcggtctttttggctataattgca 1007 Query: 896 ttgcttcttgggggtttttgtgcgtatcatgtacatctttgcttatccaacacgactaca 955 ||||| ||||| || |||||||| || || ||||||||||||| | || || || || Sbjct: 1008 ttgctccttggtgggttttgtgcttaccacacacatctttgcttaacaaatacaacaacg 1067 Query: 956 aacgagacattcaaatggcaagattacgttttctggatgaaaaaggagaacg 1007 || |||||||||||||||||||| || || | |||| |||||||| ||||| Sbjct: 1068 aatgagacattcaaatggcaagactatattatgtggaggaaaaaggtgaacg 1119 Score = 46.1 bits (23), Expect = 0.35 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1070 aaatcaccaccaagcaaatggaagacgttcttctc 1104 ||||| |||||||||||||||||| |||| ||||| Sbjct: 1152 aaatcgccaccaagcaaatggaaggcgtttttctc 1186
>dbj|AK066352.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063O03, full insert sequence Length = 1297 Score = 890 bits (449), Expect = 0.0 Identities = 828/953 (86%), Gaps = 1/953 (0%) Strand = Plus / Plus Query: 56 gggatggacgtgccgtggctgctggtggcgcacggggcggtgacggcgctggtggttgtg 115 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 122 gggatggacgtgccgtggctgctggtggcgcacgggtcggtgacggcgctggtggtggtg 181 Query: 116 tcgtttctctgcgggcagtggcccatcttcgagggcaccttcgttcagagcatcaaccac 175 || || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 182 tccttcctctgcgggcagtggcccatcttcgagggcaccttcgtgcagcgcatcaaccac 241 Query: 176 ttcctcacctccggcgcttaccgccactttctgcggctcgtgcaggcggcgtgcggtacc 235 |||||||||| |||||| |||| |||| | ||||||||||| || ||||||||||| | Sbjct: 242 ttcctcaccttcggcgcctaccaccacctcctgcggctcgtccacgcggcgtgcggcaat 301 Query: 236 ggagccagggatctcgtgctcggcgtcgagcagtactgctgcgaccgccctaaccctatc 295 || |||||||||||||| |||||||||||| |||||||||||||| || ||||| ||| Sbjct: 302 ggggccagggatctcgtcctcggcgtcgagagctactgctgcgaccggcccaacccgatc 361 Query: 296 ctgcaggttttttatgttgccataattggtggaacatattctataatagtgcagtcatct 355 |||||| ||||||| ||||||||||| || | |||||||| |||||| || ||| ||||| Sbjct: 362 ctgcagattttttacgttgccataataggggtaacatattttataatcgtccagacatct 421 Query: 356 ttcaagtacattcctgggtattacgtgagtgtattgcacaggtacctgagcattgtggtt 415 ||| |||||||||||||||| || ||||||| | ||||||| |||||||| || |||| | Sbjct: 422 ttccagtacattcctgggtactatgtgagtggactgcacagatacctgagtatcgtggct 481 Query: 416 gtttctattggtgctatactctttgtcctcactagcttttctgatcctgggactgttact 475 ||| ||||||||||| ||||||| || || |||||||||||||||||||| ||||| ||| Sbjct: 482 gttgctattggtgctttactcttcgtgctgactagcttttctgatcctggaactgtcact 541 Query: 476 tctgagaatg-tgtctcattatgtatctgcctatccttttgacaacattatttatgtaga 534 ||||||||| | ||||| ||| ||||||||||||| | ||| ||| |||| || || Sbjct: 542 gctgagaatgttttctcaatatctatctgcctatccatatgatggcatcatttttgagga 601 Query: 535 gaaagaatgttcaacatgcaagattaccagaccagctagggcaaagcattgcagaatatg 594 |||||| ||||| || ||||||||| |||| ||||| ||||||||||| || |||||||| Sbjct: 602 gaaagagtgttctacctgcaagattgccaggccagccagggcaaagcactgtagaatatg 661 Query: 595 tgatagatgtgtagctcgatttgatcaccactgtggatggatgaataattgcattgggga 654 ||||| |||||| || || ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 662 tgataaatgtgttgcacggtttgatcaccactgtggatggatgaataactgcattgggga 721 Query: 655 gaagaatactcgctattttgtggcatttttagtttggcattttcttttatgtctgtatgg 714 ||| |||||||||||||||||||| ||||||||||||||||| ||| |||||||||| || Sbjct: 722 gaaaaatactcgctattttgtggcctttttagtttggcatttccttatatgtctgtacgg 781 Query: 715 agcaattatacttggcttcattgttgctggtgaattaaaagacaagaaagttgtctacat 774 ||| |||| ||||| |||||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 782 agcggttattcttggtttcattcttgctggtgaattaaaagaaaggaaagttgtctacat 841 Query: 775 actgacagtttattacggcattgataattcattctctggcctgtttccccatgttgcaca 834 | ||||||||||||| ||||| || |||||||||||||| || ||||| ||||||||||| Sbjct: 842 attgacagtttattatggcatcgacaattcattctctgggctatttccacatgttgcaca 901 Query: 835 gtggttgcttgctgtccataacacacagatacttttggctgtatttttgggtataatagc 894 |||| |||||||||| ||||||||||||||||| || || || ||||||| |||||| || Sbjct: 902 gtggctgcttgctgtgcataacacacagatactcttagcggtctttttggctataattgc 961 Query: 895 attgcttcttgggggtttttgtgcgtatcatgtacatctttgcttatccaacacgactac 954 |||||| ||||| || |||||||| || || ||||||||||||| | || || || || Sbjct: 962 attgctccttggtgggttttgtgcttaccacacacatctttgcttaacaaatacaacaac 1021 Query: 955 aaacgagacattcaaatggcaagattacgttttctggatgaaaaaggagaacg 1007 || |||||||||||||||||||| || || | |||| |||||||| ||||| Sbjct: 1022 gaatgagacattcaaatggcaagactatattatgtggaggaaaaaggtgaacg 1074 Score = 46.1 bits (23), Expect = 0.35 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1070 aaatcaccaccaagcaaatggaagacgttcttctc 1104 ||||| |||||||||||||||||| |||| ||||| Sbjct: 1107 aaatcgccaccaagcaaatggaaggcgtttttctc 1141
>gb|AC137597.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0022F22, from chromosome 3, complete sequence Length = 144268 Score = 220 bits (111), Expect = 1e-53 Identities = 138/147 (93%) Strand = Plus / Plus Query: 56 gggatggacgtgccgtggctgctggtggcgcacggggcggtgacggcgctggtggttgtg 115 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 31659 gggatggacgtgccgtggctgctggtggcgcacgggtcggtgacggcgctggtggtggtg 31718 Query: 116 tcgtttctctgcgggcagtggcccatcttcgagggcaccttcgttcagagcatcaaccac 175 || || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 31719 tccttcctctgcgggcagtggcccatcttcgagggcaccttcgtgcagcgcatcaaccac 31778 Query: 176 ttcctcacctccggcgcttaccgccac 202 |||||||||| |||||| |||| |||| Sbjct: 31779 ttcctcaccttcggcgcctaccaccac 31805 Score = 117 bits (59), Expect = 1e-22 Identities = 140/167 (83%) Strand = Plus / Plus Query: 398 tacctgagcattgtggttgtttctattggtgctatactctttgtcctcactagcttttct 457 |||||||| || |||| |||| ||||||||||| ||||||| || || |||||||||||| Sbjct: 33363 tacctgagtatcgtggctgttgctattggtgctttactcttcgtgctgactagcttttct 33422 Query: 458 gatcctgggactgttacttctgagaatgtgtctcattatgtatctgcctatccttttgac 517 |||||||| ||||| ||| |||||||||| ||||| ||| ||||||||||||| | ||| Sbjct: 33423 gatcctggaactgtcactgctgagaatgtttctcaatatctatctgcctatccatatgat 33482 Query: 518 aacattatttatgtagagaaagaatgttcaacatgcaagattaccag 564 ||| |||| || |||||||| ||||| || ||||||||| |||| Sbjct: 33483 ggcatcatttttgaggagaaagagtgttctacctgcaagattgccag 33529 Score = 97.6 bits (49), Expect = 1e-16 Identities = 82/93 (88%) Strand = Plus / Plus Query: 690 ggcattttcttttatgtctgtatggagcaattatacttggcttcattgttgctggtgaat 749 ||||||| ||| |||||||||| ||||| |||| ||||| |||||| |||||||||||| Sbjct: 34423 ggcatttccttatatgtctgtacggagcggttattcttggtttcattcttgctggtgaat 34482 Query: 750 taaaagacaagaaagttgtctacatactgacag 782 ||||||| | |||||||||||||||| |||||| Sbjct: 34483 taaaagaaaggaaagttgtctacatattgacag 34515 Score = 89.7 bits (45), Expect = 3e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 303 ttttttatgttgccataattggtggaacatattctataatagtgcagtcatctttcaagt 362 ||||||| ||||||||||| || | |||||||| |||||| || ||| |||||||| ||| Sbjct: 33193 ttttttacgttgccataataggggtaacatattttataatcgtccagacatctttccagt 33252 Query: 363 acattcctgggtattacgtgagtgtattgcacaggta 399 ||||||||||||| || ||||||| | |||||||||| Sbjct: 33253 acattcctgggtactatgtgagtggactgcacaggta 33289 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 208 gcggctcgtgcaggcggcgtgcggtaccggagccagggatctcgtgctcggcgtcgagca 267 ||||||||| || ||||||||||| | || |||||||||||||| |||||||||||| Sbjct: 31902 gcggctcgtccacgcggcgtgcggcaatggggccagggatctcgtcctcggcgtcgagag 31961 Query: 268 gtactgctgcgaccgccctaaccctatcctgcaggt 303 |||||||||||||| || ||||| ||||||||||| Sbjct: 31962 ctactgctgcgaccggcccaacccgatcctgcaggt 31997 Score = 87.7 bits (44), Expect = 1e-13 Identities = 65/72 (90%) Strand = Plus / Plus Query: 566 ccagctagggcaaagcattgcagaatatgtgatagatgtgtagctcgatttgatcaccac 625 ||||| ||||||||||| || ||||||||||||| |||||| || || |||||||||||| Sbjct: 33796 ccagccagggcaaagcactgtagaatatgtgataaatgtgttgcacggtttgatcaccac 33855 Query: 626 tgtggatggatg 637 |||||||||||| Sbjct: 33856 tgtggatggatg 33867 Score = 87.7 bits (44), Expect = 1e-13 Identities = 92/108 (85%) Strand = Plus / Plus Query: 833 cagtggttgcttgctgtccataacacacagatacttttggctgtatttttgggtataata 892 |||||| |||||||||| ||||||||||||||||| || || || ||||||| |||||| Sbjct: 34973 cagtggctgcttgctgtgcataacacacagatactcttagcggtctttttggctataatt 35032 Query: 893 gcattgcttcttgggggtttttgtgcgtatcatgtacatctttgctta 940 |||||||| ||||| || |||||||| || || ||||||||||||| Sbjct: 35033 gcattgctccttggtgggttttgtgcttaccacacacatctttgctta 35080 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 637 gaataattgcattggggagaagaatactcgctattttgtggcatttttagtttgg 691 |||||| |||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 33939 gaataactgcattggggagaaaaatactcgctattttgtggcctttttagtttgg 33993 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 777 tgacagtttattacggcattgataattcattctctggcctgtttccccatgttgcacag 835 ||||||||||||| ||||| || |||||||||||||| || ||||| |||||||||||| Sbjct: 34839 tgacagtttattatggcatcgacaattcattctctgggctatttccacatgttgcacag 34897 Score = 46.1 bits (23), Expect = 0.35 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1070 aaatcaccaccaagcaaatggaagacgttcttctc 1104 ||||| |||||||||||||||||| |||| ||||| Sbjct: 35492 aaatcgccaccaagcaaatggaaggcgtttttctc 35526
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 220 bits (111), Expect = 1e-53 Identities = 138/147 (93%) Strand = Plus / Plus Query: 56 gggatggacgtgccgtggctgctggtggcgcacggggcggtgacggcgctggtggttgtg 115 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct: 14016955 gggatggacgtgccgtggctgctggtggcgcacgggtcggtgacggcgctggtggtggtg 14017014 Query: 116 tcgtttctctgcgggcagtggcccatcttcgagggcaccttcgttcagagcatcaaccac 175 || || |||||||||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 14017015 tccttcctctgcgggcagtggcccatcttcgagggcaccttcgtgcagcgcatcaaccac 14017074 Query: 176 ttcctcacctccggcgcttaccgccac 202 |||||||||| |||||| |||| |||| Sbjct: 14017075 ttcctcaccttcggcgcctaccaccac 14017101 Score = 117 bits (59), Expect = 1e-22 Identities = 140/167 (83%) Strand = Plus / Plus Query: 398 tacctgagcattgtggttgtttctattggtgctatactctttgtcctcactagcttttct 457 |||||||| || |||| |||| ||||||||||| ||||||| || || |||||||||||| Sbjct: 14018659 tacctgagtatcgtggctgttgctattggtgctttactcttcgtgctgactagcttttct 14018718 Query: 458 gatcctgggactgttacttctgagaatgtgtctcattatgtatctgcctatccttttgac 517 |||||||| ||||| ||| |||||||||| ||||| ||| ||||||||||||| | ||| Sbjct: 14018719 gatcctggaactgtcactgctgagaatgtttctcaatatctatctgcctatccatatgat 14018778 Query: 518 aacattatttatgtagagaaagaatgttcaacatgcaagattaccag 564 ||| |||| || |||||||| ||||| || ||||||||| |||| Sbjct: 14018779 ggcatcatttttgaggagaaagagtgttctacctgcaagattgccag 14018825 Score = 97.6 bits (49), Expect = 1e-16 Identities = 82/93 (88%) Strand = Plus / Plus Query: 690 ggcattttcttttatgtctgtatggagcaattatacttggcttcattgttgctggtgaat 749 ||||||| ||| |||||||||| ||||| |||| ||||| |||||| |||||||||||| Sbjct: 14019719 ggcatttccttatatgtctgtacggagcggttattcttggtttcattcttgctggtgaat 14019778 Query: 750 taaaagacaagaaagttgtctacatactgacag 782 ||||||| | |||||||||||||||| |||||| Sbjct: 14019779 taaaagaaaggaaagttgtctacatattgacag 14019811 Score = 89.7 bits (45), Expect = 3e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 303 ttttttatgttgccataattggtggaacatattctataatagtgcagtcatctttcaagt 362 ||||||| ||||||||||| || | |||||||| |||||| || ||| |||||||| ||| Sbjct: 14018489 ttttttacgttgccataataggggtaacatattttataatcgtccagacatctttccagt 14018548 Query: 363 acattcctgggtattacgtgagtgtattgcacaggta 399 ||||||||||||| || ||||||| | |||||||||| Sbjct: 14018549 acattcctgggtactatgtgagtggactgcacaggta 14018585 Score = 87.7 bits (44), Expect = 1e-13 Identities = 83/96 (86%) Strand = Plus / Plus Query: 208 gcggctcgtgcaggcggcgtgcggtaccggagccagggatctcgtgctcggcgtcgagca 267 ||||||||| || ||||||||||| | || |||||||||||||| |||||||||||| Sbjct: 14017198 gcggctcgtccacgcggcgtgcggcaatggggccagggatctcgtcctcggcgtcgagag 14017257 Query: 268 gtactgctgcgaccgccctaaccctatcctgcaggt 303 |||||||||||||| || ||||| ||||||||||| Sbjct: 14017258 ctactgctgcgaccggcccaacccgatcctgcaggt 14017293 Score = 87.7 bits (44), Expect = 1e-13 Identities = 65/72 (90%) Strand = Plus / Plus Query: 566 ccagctagggcaaagcattgcagaatatgtgatagatgtgtagctcgatttgatcaccac 625 ||||| ||||||||||| || ||||||||||||| |||||| || || |||||||||||| Sbjct: 14019092 ccagccagggcaaagcactgtagaatatgtgataaatgtgttgcacggtttgatcaccac 14019151 Query: 626 tgtggatggatg 637 |||||||||||| Sbjct: 14019152 tgtggatggatg 14019163 Score = 87.7 bits (44), Expect = 1e-13 Identities = 92/108 (85%) Strand = Plus / Plus Query: 833 cagtggttgcttgctgtccataacacacagatacttttggctgtatttttgggtataata 892 |||||| |||||||||| ||||||||||||||||| || || || ||||||| |||||| Sbjct: 14020269 cagtggctgcttgctgtgcataacacacagatactcttagcggtctttttggctataatt 14020328 Query: 893 gcattgcttcttgggggtttttgtgcgtatcatgtacatctttgctta 940 |||||||| ||||| || |||||||| || || ||||||||||||| Sbjct: 14020329 gcattgctccttggtgggttttgtgcttaccacacacatctttgctta 14020376 Score = 85.7 bits (43), Expect = 4e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 637 gaataattgcattggggagaagaatactcgctattttgtggcatttttagtttgg 691 |||||| |||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 14019235 gaataactgcattggggagaaaaatactcgctattttgtggcctttttagtttgg 14019289 Score = 69.9 bits (35), Expect = 2e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 777 tgacagtttattacggcattgataattcattctctggcctgtttccccatgttgcacag 835 ||||||||||||| ||||| || |||||||||||||| || ||||| |||||||||||| Sbjct: 14020135 tgacagtttattatggcatcgacaattcattctctgggctatttccacatgttgcacag 14020193 Score = 46.1 bits (23), Expect = 0.35 Identities = 32/35 (91%) Strand = Plus / Plus Query: 1070 aaatcaccaccaagcaaatggaagacgttcttctc 1104 ||||| |||||||||||||||||| |||| ||||| Sbjct: 14020788 aaatcgccaccaagcaaatggaaggcgtttttctc 14020822
>gb|AY107958.1| Zea mays PCO078702 mRNA sequence Length = 436 Score = 85.7 bits (43), Expect = 4e-13 Identities = 118/143 (82%) Strand = Plus / Plus Query: 860 cagatacttttggctgtatttttgggtataatagcattgcttcttgggggtttttgtgcg 919 |||||||| ||| ||||||||||| |||| ||||| |||| ||||| || |||||||| Sbjct: 14 cagatactcttgagtgtatttttggctatattagcactgctccttggtggcttttgtgct 73 Query: 920 tatcatgtacatctttgcttatccaacacgactacaaacgagacattcaaatggcaagat 979 || |||| ||||||||| || | || || || || ||||||||||||||||||||||| Sbjct: 74 taccatgcacatctttgtttgacaaatacaacaaccaacgagacattcaaatggcaagac 133 Query: 980 tacgttttctggatgaaaaagga 1002 ||| | | |||||||||||||| Sbjct: 134 tacatcatgtggatgaaaaagga 156
>gb|AC155882.2| Medicago truncatula chromosome 7 BAC clone mte1-6p16, complete sequence Length = 113536 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Minus Query: 562 cagaccagctagggcaaagcattgcagaatatgtgatagatgtgtagctcgatttgatca 621 |||||| ||||| |||||||||| || || |||||| ||||||| || |||||||| || Sbjct: 71090 cagacctgctagatcaaagcattgtagcatttgtgatcgatgtgttgcacgatttgacca 71031 Query: 622 ccactgtggatggatg 637 ||||||||||||||| Sbjct: 71030 tcactgtggatggatg 71015
>ref|XM_634243.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0185344) mRNA, complete cds Length = 1341 Score = 50.1 bits (25), Expect = 0.022 Identities = 55/65 (84%) Strand = Plus / Plus Query: 581 cattgcagaatatgtgatagatgtgtagctcgatttgatcaccactgtggatggatgaat 640 ||||| ||||| |||||||||||||| | | |||||||||| || ||| |||||| ||| Sbjct: 526 cattgtagaatttgtgatagatgtgttggtagatttgatcatcattgtccatggattaat 585 Query: 641 aattg 645 ||||| Sbjct: 586 aattg 590
>gb|AC158179.2| Selaginella moellendorffii clone JGIASXY-5A11, complete sequence Length = 40733 Score = 48.1 bits (24), Expect = 0.089 Identities = 24/24 (100%) Strand = Plus / Minus Query: 614 tttgatcaccactgtggatggatg 637 |||||||||||||||||||||||| Sbjct: 29264 tttgatcaccactgtggatggatg 29241
>gb|AC186392.3| Pan troglodytes BAC clone CH251-425I12 from chromosome 16, complete sequence Length = 165044 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Minus Query: 292 tatcctgcaggttttttatgttg 314 ||||||||||||||||||||||| Sbjct: 138318 tatcctgcaggttttttatgttg 138296
>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16 Length = 227214 Score = 46.1 bits (23), Expect = 0.35 Identities = 26/27 (96%) Strand = Plus / Plus Query: 53 gacgggatggacgtgccgtggctgctg 79 ||||| ||||||||||||||||||||| Sbjct: 220014 gacggaatggacgtgccgtggctgctg 220040
>emb|AL117693.5|CNS01DRO Human chromosome 14 DNA sequence BAC R-562L8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 179598 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1405 ttgaatactttattatctgggca 1427 ||||||||||||||||||||||| Sbjct: 41989 ttgaatactttattatctgggca 42011
>emb|Z54144.2|BTIFNGGN Bos taurus IFNG gene for interferon-gamma prepeptide Length = 10193 Score = 46.1 bits (23), Expect = 0.35 Identities = 23/23 (100%) Strand = Plus / Plus Query: 714 gagcaattatacttggcttcatt 736 ||||||||||||||||||||||| Sbjct: 8425 gagcaattatacttggcttcatt 8447
>ref|XM_508005.2| PREDICTED: Pan troglodytes ADP-ribosylation factor-like 3 (ARL3), mRNA Length = 3753 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 808 ctctggcctgtttccccatgtt 829 |||||||||||||||||||||| Sbjct: 1918 ctctggcctgtttccccatgtt 1897
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 cggggcggtgacggcgctggtg 109 |||||||||||||||||||||| Sbjct: 907317 cggggcggtgacggcgctggtg 907338
>ref|NM_004311.2| Homo sapiens ADP-ribosylation factor-like 3 (ARL3), mRNA Length = 3891 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 808 ctctggcctgtttccccatgtt 829 |||||||||||||||||||||| Sbjct: 2042 ctctggcctgtttccccatgtt 2021
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 89 ggggcggtgacggcgctggtgg 110 |||||||||||||||||||||| Sbjct: 6487850 ggggcggtgacggcgctggtgg 6487829
>emb|AL391121.29| Human DNA sequence from clone RP11-47A8 on chromosome 10 Contains the 3' end of the SUFU gene for suppressor of fused homolog (Drosophila), the TRIM8 gene for tripartite motif-containing 8, the ARL3 gene for ADP-ribosylation factor-like 3, the SFXN2 gene for sideroflexin 2 and three CpG islands, complete sequence Length = 166600 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 808 ctctggcctgtttccccatgtt 829 |||||||||||||||||||||| Sbjct: 84909 ctctggcctgtttccccatgtt 84930
>gb|AC164112.2| Mus musculus BAC clone RP23-266E12 from chromosome 16, complete sequence Length = 171693 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 875 gtatttttgggtataatagcat 896 |||||||||||||||||||||| Sbjct: 119577 gtatttttgggtataatagcat 119556
>emb|AJ748323.1| Sulfolobus islandicus plasmid pARN4 Length = 26476 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 521 attatttatgtagagaaagaat 542 |||||||||||||||||||||| Sbjct: 13773 attatttatgtagagaaagaat 13752
>emb|BX085194.14| Zebrafish DNA sequence from clone DKEY-242M13, complete sequence Length = 169865 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1209 ggtcgttctcttccaagaagtc 1230 |||||||||||||||||||||| Sbjct: 20837 ggtcgttctcttccaagaagtc 20858
>emb|AJ604530.1| Enterobacteria phage BF23 tRNA gene region Length = 14504 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1242 aaatgctgttgcaactgttgta 1263 |||||||||||||||||||||| Sbjct: 11959 aaatgctgttgcaactgttgta 11938
>emb|BX000537.11| Mouse DNA sequence from clone RP24-392J24 on chromosome X, complete sequence Length = 162188 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 861 agatacttttggctgtattttt 882 |||||||||||||||||||||| Sbjct: 151896 agatacttttggctgtattttt 151917
>ref|XM_393067.3| PREDICTED: Apis mellifera similar to Patsas CG6618-PB, isoform B, transcript variant 1 (LOC409559), mRNA Length = 2260 Score = 42.1 bits (21), Expect = 5.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 578 aagcattgcagaatatgtgatagatgtgt 606 |||||||||||||| ||| |||||||||| Sbjct: 1574 aagcattgcagaatttgtaatagatgtgt 1602
>dbj|AK229725.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-38-A16 Length = 588 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 880 tttgggtataatagcattgcttctt 904 ||||||||||||||||||| ||||| Sbjct: 432 tttgggtataatagcattgattctt 456
>dbj|AK228483.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL15-08-N24 Length = 1429 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 602 tgtgtagctcgatttgatcaccactgtggatggatgaataa 642 ||||| ||||| |||||||| || ||||| ||||||||||| Sbjct: 608 tgtgtggctcggtttgatcatcattgtgggtggatgaataa 648
>gb|AC186548.3| Gallus gallus BAC clone TAM33-7F21 from chromosome z, complete sequence Length = 150358 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1243 aatgctgttgcaactgttgta 1263 ||||||||||||||||||||| Sbjct: 27606 aatgctgttgcaactgttgta 27626
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 59 atggacgtgccgtggctgctg 79 ||||||||||||||||||||| Sbjct: 4886003 atggacgtgccgtggctgctg 4886023
>ref|NM_148720.2| Arabidopsis thaliana unknown protein (AT3G13275) mRNA, complete cds Length = 649 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 880 tttgggtataatagcattgcttctt 904 ||||||||||||||||||| ||||| Sbjct: 467 tttgggtataatagcattgattctt 491
>ref|NM_202495.1| Arabidopsis thaliana metal ion binding (AT3G04970) mRNA, complete cds Length = 1505 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 602 tgtgtagctcgatttgatcaccactgtggatggatgaataa 642 ||||| ||||| |||||||| || ||||| ||||||||||| Sbjct: 608 tgtgtggctcggtttgatcatcattgtgggtggatgaataa 648
>ref|NM_111369.3| Arabidopsis thaliana metal ion binding (AT3G04970) mRNA, complete cds Length = 1420 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 602 tgtgtagctcgatttgatcaccactgtggatggatgaataa 642 ||||| ||||| |||||||| || ||||| ||||||||||| Sbjct: 609 tgtgtggctcggtttgatcatcattgtgggtggatgaataa 649
>gb|AY208188.1| Arabidopsis thaliana unknown protein (At3g13275) mRNA, complete cds Length = 649 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 880 tttgggtataatagcattgcttctt 904 ||||||||||||||||||| ||||| Sbjct: 467 tttgggtataatagcattgattctt 491
>gb|AC132245.3| Mus musculus BAC clone RP24-420M8 from chromosome 13, complete sequence Length = 148654 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 684 tagtttggcattttcttttat 704 ||||||||||||||||||||| Sbjct: 129682 tagtttggcattttcttttat 129662
>gb|AC123063.4| Mus musculus BAC clone RP23-219I20 from 5, complete sequence Length = 204795 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 815 ctgtttccccatgttgcacag 835 ||||||||||||||||||||| Sbjct: 66082 ctgtttccccatgttgcacag 66102
>gb|AC123954.4| Mus musculus BAC clone RP23-249L6 from 13, complete sequence Length = 200727 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 684 tagtttggcattttcttttat 704 ||||||||||||||||||||| Sbjct: 162388 tagtttggcattttcttttat 162408
>gb|AC129292.4| Mus musculus chromosome 5 clone RP24-507A8, complete sequence Length = 186200 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 815 ctgtttccccatgttgcacag 835 ||||||||||||||||||||| Sbjct: 140975 ctgtttccccatgttgcacag 140995
>emb|AL160271.19| Human DNA sequence from clone RP11-323H21 on chromosome 9q34.1-34.3 Contains the 5' end of the GRF2 gene for guanine nucleotide releasing factor 2, the 3' end of the CRSP8 gene for subunit 8 of the cofactor required for Sp1 transcriptional activation, a novel gene, an eukaryotic translation initiation factor 4A isoform 1 (EIF4A1) pseudogene and two CpG islands, complete sequence Length = 180209 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1324 caaagcaattaactgtagatgacaa 1348 |||||||||||||||||||| |||| Sbjct: 7522 caaagcaattaactgtagataacaa 7498
>emb|BX323590.8| Zebrafish DNA sequence from clone CH211-42I9 in linkage group 1, complete sequence Length = 178876 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 623 cactgtggatggatgaataattgca 647 ||||||||||||| ||||||||||| Sbjct: 111792 cactgtggatggaagaataattgca 111816
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 ctggtggcgcacggggcggtgacgg 101 ||||||||| ||||||||||||||| Sbjct: 803237 ctggtggcggacggggcggtgacgg 803213
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 gatctcgtgctcggcgtcgag 265 ||||||||||||||||||||| Sbjct: 3120201 gatctcgtgctcggcgtcgag 3120221
>dbj|BS000216.1| Pan troglodytes chromosome 22 clone:RP43-057N15, map 22, complete sequences Length = 164711 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 959 gagacattcaaatggcaagat 979 ||||||||||||||||||||| Sbjct: 159401 gagacattcaaatggcaagat 159421
>dbj|AB024034.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MDC11 Length = 86233 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 880 tttgggtataatagcattgcttctt 904 ||||||||||||||||||| ||||| Sbjct: 29539 tttgggtataatagcattgattctt 29515
>emb|BX822230.1|CNS0A5XY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZC06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1283 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 602 tgtgtagctcgatttgatcaccactgtggatggatgaataa 642 ||||| ||||| |||||||| || ||||| ||||||||||| Sbjct: 584 tgtgtggctcggtttgatcatcattgtgggtggatgaataa 624
>emb|BX825599.1|CNS0A517 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL47ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1259 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 602 tgtgtagctcgatttgatcaccactgtggatggatgaataa 642 ||||| ||||| |||||||| || ||||| ||||||||||| Sbjct: 495 tgtgtggctcggtttgatcatcattgtgggtggatgaataa 535
>emb|BX823998.1|CNS0A4O7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH13ZA03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1385 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 602 tgtgtagctcgatttgatcaccactgtggatggatgaataa 642 ||||| ||||| |||||||| || ||||| ||||||||||| Sbjct: 609 tgtgtggctcggtttgatcatcattgtgggtggatgaataa 649
>emb|BX842108.1|CNS09YDI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB21ZD06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1099 Score = 42.1 bits (21), Expect = 5.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 602 tgtgtagctcgatttgatcaccactgtggatggatgaataa 642 ||||| ||||| |||||||| || ||||| ||||||||||| Sbjct: 584 tgtgtggctcggtttgatcatcattgtgggtggatgaataa 624
>emb|BX001036.12| Zebrafish DNA sequence from clone CH211-155G22 in linkage group 1, complete sequence Length = 178860 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 623 cactgtggatggatgaataattgca 647 ||||||||||||| ||||||||||| Sbjct: 111492 cactgtggatggaagaataattgca 111516
>dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, section 43/105 Length = 340000 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 959 gagacattcaaatggcaagat 979 ||||||||||||||||||||| Sbjct: 159600 gagacattcaaatggcaagat 159620
>emb|Z24160.1|HS295YG5 H. sapiens (D21S1258) DNA segment containing (CA) repeat; clone AFM295yg5; single read Length = 381 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 959 gagacattcaaatggcaagat 979 ||||||||||||||||||||| Sbjct: 327 gagacattcaaatggcaagat 307
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1382 aagcgatgaatagttttgacatttt 1406 ||||||||||||||||||| ||||| Sbjct: 1306930 aagcgatgaatagttttgatatttt 1306906
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 5.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 ctggtggcgcacggggcggtgacgg 101 ||||||||| ||||||||||||||| Sbjct: 474317 ctggtggcggacggggcggtgacgg 474293
>dbj|AP001605.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1987H1, APP-D21S292 region, complete sequence Length = 165942 Score = 42.1 bits (21), Expect = 5.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 959 gagacattcaaatggcaagat 979 ||||||||||||||||||||| Sbjct: 61622 gagacattcaaatggcaagat 61642 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 269,031,022 Number of extensions: 14763921 Number of successful extensions: 315256 Number of sequences better than 10.0: 52 Number of HSP's gapped: 315251 Number of HSP's successfully gapped: 73 Length of query: 1442 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1419 Effective length of database: 18,503,978,556 Effective search space: 26257145570964 Effective search space used: 26257145570964 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)