ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf49j04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK103240:Os04g0690400 31 0.36
2AK102981:Os04g0690400 31 0.36
3AK109983:Os07g0676700 30 1.0
4AK063396:Os04g0395100 30 1.0
5AK105531:Os06g0704500 29 1.8
6Os09g0413300:Os09g0413300 28 3.0
7Os04g0376400:Os04g0376400 28 3.0
8Os08g0163600:Os08g0163600 27 6.7
9AK106615:Os04g0674700 27 6.7

>AK103240:Os04g0690400 |
          Length = 742
 Score = 31.2 bits (69), Expect = 0.36
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = -2

Query: 164 KLWQQSKTSCGSKHQITS*SGGRSERRQPL-WQHHR-PPLLQSPARRRTPPSGPQR 3
           ++  QS++    +    + SGGR  RR P   +HHR PP   +P R R  P  P+R
Sbjct: 2   QMQMQSRSRIRGRDPPPASSGGRYRRRSPSPRRHHRAPPSNPNPHRDRRTPDRPRR 57



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>AK102981:Os04g0690400 |
          Length = 742

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = -2

Query: 164 KLWQQSKTSCGSKHQITS*SGGRSERRQPL-WQHHR-PPLLQSPARRRTPPSGPQR 3
           ++  QS++    +    + SGGR  RR P   +HHR PP   +P R R  P  P+R
Sbjct: 2   QMQMQSRSRIRGRDPPPASSGGRYRRRSPSPRRHHRAPPSNPNPHRDRRTPDRPRR 57



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>AK109983:Os07g0676700 |
          Length = 270

 Score = 29.6 bits (65), Expect = 1.0
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = -2

Query: 194 QHHDTRQIFHKLWQQSKTSCGSKHQITS*SGGRSERRQPLWQHHRPPLLQSPARRR 27
           Q H  R+  H+L    +     +H++         RR PL +H  PP  Q P RRR
Sbjct: 29  QLHPRRRHHHRLHNHGRRRRCHRHRL---------RRPPLRRHPPPPRSQHPPRRR 75



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>AK063396:Os04g0395100 |
          Length = 325

 Score = 29.6 bits (65), Expect = 1.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 101 GRSERRQPLWQHHRPPLLQSPARRRTPPSGP 9
           G + RR+ LWQ H  PLL+   RR+ P  GP
Sbjct: 24  GGAARRRRLWQRHLLPLLR---RRQHPGGGP 51



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>AK105531:Os06g0704500 |
          Length = 409

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = -2

Query: 149 SKTSCGSKHQITS*SGGRSE---RRQPLWQHHRPPLLQSPARRRTPPSGP 9
           SK  C +    T   GGR+     R PL  HH PP       RRTPP+ P
Sbjct: 229 SKAQCQATPPTTRRPGGRTPLAPHRSPL-PHHMPP-------RRTPPTPP 270



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>Os09g0413300:Os09g0413300 |
          Length = 810

 Score = 28.1 bits (61), Expect = 3.0
 Identities = 9/43 (20%), Positives = 23/43 (53%)
 Frame = +2

Query: 146 CSAATAYGRFDECHGVAVSTQLRVICLLSVSCLIDYKNLGYLE 274
           C+  +      + HG+ + T++ + C++  + +  Y N G++E
Sbjct: 281 CAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIE 323



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>Os04g0376400:Os04g0376400 |
          Length = 479

 Score = 28.1 bits (61), Expect = 3.0
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = -2

Query: 164 KLWQQSKTSCGSKHQITS*SGGRSERRQPLWQHHRPPLLQSPARRRTPPS 15
           ++W Q+K S   K+     +GG  + + P+    RPP LQSPA    P S
Sbjct: 401 QVWTQTKISPEFKNV----TGGARQTQAPV---QRPPALQSPAPTTAPMS 443



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>Os08g0163600:Os08g0163600 |
          Length = 289

 Score = 26.9 bits (58), Expect = 6.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 104 GGRSERRQPLWQHHRPPLLQSPARRRTPPSGP 9
           G  + ++QP WQ  R  +   P  RR   SGP
Sbjct: 69  GEEARQQQPSWQPPRDQVTHHPRGRRAHRSGP 100



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>AK106615:Os04g0674700 |
          Length = 558

 Score = 26.9 bits (58), Expect = 6.7
 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
 Frame = -3

Query: 166 ISCGSRAKLPADQSTRLPLEAEVDQNDGS------RYGSTTG 59
           +    RA+L A Q  R P  AEVD  DG       R GST G
Sbjct: 349 LPASERARLKARQGVRTPGMAEVDVVDGETGRSVPRDGSTMG 390


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 13,239,863
Number of extensions: 285835
Number of successful extensions: 1001
Number of sequences better than 10.0: 9
Number of HSP's gapped: 995
Number of HSP's successfully gapped: 9
Length of query: 160
Length of database: 15,399,855
Length adjustment: 92
Effective length of query: 68
Effective length of database: 11,716,083
Effective search space: 796693644
Effective search space used: 796693644
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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