| Clone Name | FLbaf49j04 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK103240:Os04g0690400 | 31 | 0.36 | 2 | AK102981:Os04g0690400 | 31 | 0.36 | 3 | AK109983:Os07g0676700 | 30 | 1.0 | 4 | AK063396:Os04g0395100 | 30 | 1.0 | 5 | AK105531:Os06g0704500 | 29 | 1.8 | 6 | Os09g0413300:Os09g0413300 | 28 | 3.0 | 7 | Os04g0376400:Os04g0376400 | 28 | 3.0 | 8 | Os08g0163600:Os08g0163600 | 27 | 6.7 | 9 | AK106615:Os04g0674700 | 27 | 6.7 |
|---|
>AK103240:Os04g0690400 | Length = 742 Score = 31.2 bits (69), Expect = 0.36 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = -2 Query: 164 KLWQQSKTSCGSKHQITS*SGGRSERRQPL-WQHHR-PPLLQSPARRRTPPSGPQR 3 ++ QS++ + + SGGR RR P +HHR PP +P R R P P+R Sbjct: 2 QMQMQSRSRIRGRDPPPASSGGRYRRRSPSPRRHHRAPPSNPNPHRDRRTPDRPRR 57
>AK102981:Os04g0690400 | Length = 742 Score = 31.2 bits (69), Expect = 0.36 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = -2 Query: 164 KLWQQSKTSCGSKHQITS*SGGRSERRQPL-WQHHR-PPLLQSPARRRTPPSGPQR 3 ++ QS++ + + SGGR RR P +HHR PP +P R R P P+R Sbjct: 2 QMQMQSRSRIRGRDPPPASSGGRYRRRSPSPRRHHRAPPSNPNPHRDRRTPDRPRR 57
>AK109983:Os07g0676700 | Length = 270 Score = 29.6 bits (65), Expect = 1.0 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = -2 Query: 194 QHHDTRQIFHKLWQQSKTSCGSKHQITS*SGGRSERRQPLWQHHRPPLLQSPARRR 27 Q H R+ H+L + +H++ RR PL +H PP Q P RRR Sbjct: 29 QLHPRRRHHHRLHNHGRRRRCHRHRL---------RRPPLRRHPPPPRSQHPPRRR 75
>AK063396:Os04g0395100 | Length = 325 Score = 29.6 bits (65), Expect = 1.0 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = -2 Query: 101 GRSERRQPLWQHHRPPLLQSPARRRTPPSGP 9 G + RR+ LWQ H PLL+ RR+ P GP Sbjct: 24 GGAARRRRLWQRHLLPLLR---RRQHPGGGP 51
>AK105531:Os06g0704500 | Length = 409 Score = 28.9 bits (63), Expect = 1.8 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = -2 Query: 149 SKTSCGSKHQITS*SGGRSE---RRQPLWQHHRPPLLQSPARRRTPPSGP 9 SK C + T GGR+ R PL HH PP RRTPP+ P Sbjct: 229 SKAQCQATPPTTRRPGGRTPLAPHRSPL-PHHMPP-------RRTPPTPP 270
>Os09g0413300:Os09g0413300 | Length = 810 Score = 28.1 bits (61), Expect = 3.0 Identities = 9/43 (20%), Positives = 23/43 (53%) Frame = +2 Query: 146 CSAATAYGRFDECHGVAVSTQLRVICLLSVSCLIDYKNLGYLE 274 C+ + + HG+ + T++ + C++ + + Y N G++E Sbjct: 281 CAQMSMVREASQIHGMVLKTEMYLDCVVKEALISTYTNFGFIE 323
>Os04g0376400:Os04g0376400 | Length = 479 Score = 28.1 bits (61), Expect = 3.0 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = -2 Query: 164 KLWQQSKTSCGSKHQITS*SGGRSERRQPLWQHHRPPLLQSPARRRTPPS 15 ++W Q+K S K+ +GG + + P+ RPP LQSPA P S Sbjct: 401 QVWTQTKISPEFKNV----TGGARQTQAPV---QRPPALQSPAPTTAPMS 443
>Os08g0163600:Os08g0163600 | Length = 289 Score = 26.9 bits (58), Expect = 6.7 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = -2 Query: 104 GGRSERRQPLWQHHRPPLLQSPARRRTPPSGP 9 G + ++QP WQ R + P RR SGP Sbjct: 69 GEEARQQQPSWQPPRDQVTHHPRGRRAHRSGP 100
>AK106615:Os04g0674700 | Length = 558 Score = 26.9 bits (58), Expect = 6.7 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 6/42 (14%) Frame = -3 Query: 166 ISCGSRAKLPADQSTRLPLEAEVDQNDGS------RYGSTTG 59 + RA+L A Q R P AEVD DG R GST G Sbjct: 349 LPASERARLKARQGVRTPGMAEVDVVDGETGRSVPRDGSTMG 390 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 13,239,863 Number of extensions: 285835 Number of successful extensions: 1001 Number of sequences better than 10.0: 9 Number of HSP's gapped: 995 Number of HSP's successfully gapped: 9 Length of query: 160 Length of database: 15,399,855 Length adjustment: 92 Effective length of query: 68 Effective length of database: 11,716,083 Effective search space: 796693644 Effective search space used: 796693644 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)