ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf49j04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AJ251050.1|AFA251050 Avena fatua mRNA for VIP1 protein (vip1... 264 3e-67
2ref|NM_001050507.1| Oryza sativa (japonica cultivar-group) Os01g... 100 9e-18
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 100 9e-18
4dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic D... 100 9e-18
5dbj|AK104701.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 9e-18
6dbj|AK067215.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 9e-18
7gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genom... 66 1e-07
8gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genom... 66 1e-07
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
11dbj|AP005566.3| Oryza sativa (japonica cultivar-group) genomic D... 60 8e-06
12ref|NM_001062759.1| Oryza sativa (japonica cultivar-group) Os05g... 46 0.11
13gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
14dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
15emb|AL136143.9| Human DNA sequence from clone RP3-399C22 on chro... 46 0.11
16dbj|AK100682.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
17dbj|AK060333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
18gb|AC152970.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.11
19gb|AC016525.11| Homo sapiens chromosome 15 clone RP11-358M11 map... 42 1.8
20gb|AC008131.25| Homo sapiens chromosome 15 clone ctd-2265b18 map... 42 1.8
21emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster 42 1.8
22emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 7.0
23gb|AC107241.4| Homo sapiens chromosome 15, clone CTD-2501E16, co... 40 7.0
24gb|AC026789.5| Homo sapiens chromosome 5 clone CTD-2219P2, compl... 40 7.0
25gb|AC026727.6| Homo sapiens chromosome 5 clone CTD-2258D6, compl... 40 7.0
26gb|AC027273.5| Homo sapiens BAC clone RP11-764F10 from 4, comple... 40 7.0
27emb|CR391992.5| Human DNA sequence from clone RP1-308E4 on chrom... 40 7.0
28emb|AL031727.43|HS1056L3 Human DNA sequence from clone RP5-1056L... 40 7.0
29emb|AL031668.23|HS64K7 Human DNA sequence from clone RP1-64K7 on... 40 7.0
30gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.0
31gb|AC008549.6|AC008549 Homo sapiens chromosome 5 clone CTC-505O3... 40 7.0
32ref|XM_557830.1| Anopheles gambiae str. PEST ENSANGP00000026826 ... 40 7.0
33ref|XM_310857.2| Anopheles gambiae str. PEST ENSANGP00000012466 ... 40 7.0

>emb|AJ251050.1|AFA251050 Avena fatua mRNA for VIP1 protein (vip1 gene)
          Length = 1061
 Score =  264 bits (133), Expect = 3e-67
 Identities = 300/350 (85%), Gaps = 13/350 (3%)
 Strand = Plus / Plus

                                                                       
Query: 68  gctgccataacggctgccgtcgttctgatctacctccgcttcaagaggtaatctggtgct 127
           |||||| | ||||| |||||||| ||||||||||||||| ||||||||||||||||| ||
Sbjct: 637 gctgccgtcacggccgccgtcgtgctgatctacctccgcctcaagaggtaatctggtact 696

                                                                       
Query: 128 ttgatccgcaggaagttttgctctgctgccacagcttatggaagatttgacgagt--gtc 185
             ||| ||||||||||||||||||||||| |||||||||||||||||||| ||||  |||
Sbjct: 697 cggatgcgcaggaagttttgctctgctgctacagcttatggaagatttgatgagtttgtc 756

                                                                       
Query: 186 atggtgttgctgttagtacccaactgagag--taata------tgtcttctatcagttag 237
            ||||| ||||| ||||||   ||||||||  |||||      || ||||||| ||||||
Sbjct: 757 gtggtgatgctggtagtacggtactgagagagtaatactatgatgacttctatgagttag 816

                                                                       
Query: 238 ttgcttaatagactacaaaaacttagggtatctggagaatggttacgtttcatcgctgtt 297
           ||||||||||| ||||| |||| |||| |||||||| |  ||||| ||||||||| ||||
Sbjct: 817 ttgcttaatagcctacagaaacatagg-tatctggatatcggttatgtttcatcgatgtt 875

                                                                       
Query: 298 tttccttaatcatcc-acgggcttttggtggtgacagtgaatgtgtacacactttgtcaa 356
           || |||| ||||  | ||| |||||||||||||||  ||||| |  | ||||||||||||
Sbjct: 876 tt-cctttatcacgctacgtgcttttggtggtgacgatgaatctcaagacactttgtcaa 934

                                                             
Query: 357 ccgagcaaggctgtatgcttggttatgttatcgttatggttgctggctta 406
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 ccgagcaaggctgtatgcttggttatgttatcgttatggttgctggctta 984



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>ref|NM_001050507.1| Oryza sativa (japonica cultivar-group) Os01g0698000 (Os01g0698000)
            mRNA, complete cds
          Length = 1440

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                        
Query: 93   tgatctacctccgcttcaagaggtaatctggtgctttgatccgcaggaagttttgctctg 152
            |||||| ||||||| ||||||||||| |||||| | |||| | |||||||||||||||||
Sbjct: 1114 tgatcttcctccgcctcaagaggtaaactggtgatctgatgcacaggaagttttgctctg 1173

                                          
Query: 153  ctgccacagcttatggaagatttgacgagt 182
            |||| ||||| |||||||||||||| ||||
Sbjct: 1174 ctgcgacagcctatggaagatttgatgagt 1203



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 210  tgagagtaatatgtcttctatcagttagttgcttaatagactacaaaaacttaggg 265
            ||||| || |||| ||||||| || |||||||||||||| ||||| |||| |||||
Sbjct: 1243 tgagaatagtatgacttctatgagctagttgcttaatagcctacagaaacataggg 1298



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                            
Query: 93       tgatctacctccgcttcaagaggtaatctggtgctttgatccgcaggaagttttgctctg 152
                |||||| ||||||| ||||||||||| |||||| | |||| | |||||||||||||||||
Sbjct: 28875098 tgatcttcctccgcctcaagaggtaaactggtgatctgatgcacaggaagttttgctctg 28875039

                                              
Query: 153      ctgccacagcttatggaagatttgacgagt 182
                |||| ||||| |||||||||||||| ||||
Sbjct: 28875038 ctgcgacagcctatggaagatttgatgagt 28875009



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 210      tgagagtaatatgtcttctatcagttagttgcttaatagactacaaaaacttaggg 265
                ||||| || |||| ||||||| || |||||||||||||| ||||| |||| |||||
Sbjct: 28874969 tgagaatagtatgacttctatgagctagttgcttaatagcctacagaaacataggg 28874914



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>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1116_H09
          Length = 110086

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                         
Query: 93    tgatctacctccgcttcaagaggtaatctggtgctttgatccgcaggaagttttgctctg 152
             |||||| ||||||| ||||||||||| |||||| | |||| | |||||||||||||||||
Sbjct: 93141 tgatcttcctccgcctcaagaggtaaactggtgatctgatgcacaggaagttttgctctg 93082

                                           
Query: 153   ctgccacagcttatggaagatttgacgagt 182
             |||| ||||| |||||||||||||| ||||
Sbjct: 93081 ctgcgacagcctatggaagatttgatgagt 93052



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 210   tgagagtaatatgtcttctatcagttagttgcttaatagactacaaaaacttaggg 265
             ||||| || |||| ||||||| || |||||||||||||| ||||| |||| |||||
Sbjct: 93012 tgagaatagtatgacttctatgagctagttgcttaatagcctacagaaacataggg 92957



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>dbj|AK104701.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-C09, full
            insert sequence
          Length = 1361

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                        
Query: 93   tgatctacctccgcttcaagaggtaatctggtgctttgatccgcaggaagttttgctctg 152
            |||||| ||||||| ||||||||||| |||||| | |||| | |||||||||||||||||
Sbjct: 1114 tgatcttcctccgcctcaagaggtaaactggtgatctgatgcacaggaagttttgctctg 1173

                                          
Query: 153  ctgccacagcttatggaagatttgacgagt 182
            |||| ||||| |||||||||||||| ||||
Sbjct: 1174 ctgcgacagcctatggaagatttgatgagt 1203



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>dbj|AK067215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098I22, full
            insert sequence
          Length = 1441

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 80/90 (88%)
 Strand = Plus / Plus

                                                                        
Query: 93   tgatctacctccgcttcaagaggtaatctggtgctttgatccgcaggaagttttgctctg 152
            |||||| ||||||| ||||||||||| |||||| | |||| | |||||||||||||||||
Sbjct: 1115 tgatcttcctccgcctcaagaggtaaactggtgatctgatgcacaggaagttttgctctg 1174

                                          
Query: 153  ctgccacagcttatggaagatttgacgagt 182
            |||| ||||| |||||||||||||| ||||
Sbjct: 1175 ctgcgacagcctatggaagatttgatgagt 1204



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 210  tgagagtaatatgtcttctatcagttagttgcttaatagactacaaaaacttaggg 265
            ||||| || |||| ||||||| || |||||||||||||| ||||| |||| |||||
Sbjct: 1244 tgagaatagtatgacttctatgagctagttgcttaatagcctacagaaacataggg 1299



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>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete
             sequence
          Length = 141582

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                         
Query: 102   tccgcttcaagaggtaatctggtgctttgatccgcaggaagttttgctctgctgccacag 161
             ||||| ||||||||||| | ||||   |||| | |||||||||||||||||| || ||||
Sbjct: 26712 tccgcctcaagaggtaaaccggtgagctgatgcacaggaagttttgctctgccgcgacag 26653

                                  
Query: 162   cttatggaagatttgacgagt 182
             | |||||||||||||| ||||
Sbjct: 26652 cctatggaagatttgatgagt 26632



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 210   tgagagtaatatgtcttctatcagttagttgcttaatagactacaaaaacttaggg 265
             ||||| || |||| ||||||| || |||||||||||||| ||||| |||| |||||
Sbjct: 26592 tgagaatagtatgacttctatgagctagttgcttaatagcctacagaaacataggg 26537



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>gb|AC093713.6| Oryza sativa chromosome 3 BAC OSJNBa0094F01 genomic sequence, complete
              sequence
          Length = 151479

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Minus

                                                                          
Query: 102    tccgcttcaagaggtaatctggtgctttgatccgcaggaagttttgctctgctgccacag 161
              ||||| ||||||||||| | ||||   |||| | |||||||||||||||||| || ||||
Sbjct: 137346 tccgcctcaagaggtaaaccggtgagctgatgcacaggaagttttgctctgccgcgacag 137287

                                   
Query: 162    cttatggaagatttgacgagt 182
              | |||||||||||||| ||||
Sbjct: 137286 cctatggaagatttgatgagt 137266



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                      
Query: 210    tgagagtaatatgtcttctatcagttagttgcttaatagactacaaaaacttaggg 265
              ||||| || |||| ||||||| || |||||||||||||| ||||| |||| |||||
Sbjct: 137226 tgagaatagtatgacttctatgagctagttgcttaatagcctacagaaacataggg 137171



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                            
Query: 102      tccgcttcaagaggtaatctggtgctttgatccgcaggaagttttgctctgctgccacag 161
                ||||| ||||||||||| | ||||   |||| | |||||||||||||||||| || ||||
Sbjct: 32943339 tccgcctcaagaggtaaaccggtgagctgatgcacaggaagttttgctctgccgcgacag 32943398

                                     
Query: 162      cttatggaagatttgacgagt 182
                | |||||||||||||| ||||
Sbjct: 32943399 cctatggaagatttgatgagt 32943419



 Score = 48.1 bits (24), Expect = 0.029
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                        
Query: 210      tgagagtaatatgtcttctatcagttagttgcttaatagactacaaaaacttaggg 265
                ||||| || |||| ||||||| || |||||||||||||| ||||| |||| |||||
Sbjct: 32943459 tgagaatagtatgacttctatgagctagttgcttaatagcctacagaaacataggg 32943514



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                          
Query: 136      caggaagttttgctctgctgccacagcttatggaagatttga 177
                ||||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 10181111 caggaagttttgctctgctgcgacagcctatgaaagatttga 10181070



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                                
Query: 218      atatgtcttctatcagttagttgcttaatagactacaaaaacttaggg 265
                ||||| ||||||| || |||||||||||||  ||||| |||| |||||
Sbjct: 10181019 atatgacttctatgagctagttgcttaataacctacagaaacataggg 10180972



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>dbj|AP005566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1253_E02
          Length = 166645

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                        
Query: 136    caggaagttttgctctgctgccacagcttatggaagatttga 177
              ||||||||||||||||||||| ||||| |||| |||||||||
Sbjct: 140789 caggaagttttgctctgctgcgacagcctatgaaagatttga 140748



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                              
Query: 218    atatgtcttctatcagttagttgcttaatagactacaaaaacttaggg 265
              ||||| ||||||| || |||||||||||||  ||||| |||| |||||
Sbjct: 140697 atatgacttctatgagctagttgcttaataacctacagaaacataggg 140650



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>ref|NM_001062759.1| Oryza sativa (japonica cultivar-group) Os05g0548100 (Os05g0548100)
           mRNA, complete cds
          Length = 1040

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 110 aagaggtaatctggtgctttgatccgcaggaagttttgctctgctgc 156
           |||||||||||||||||| |||  || | ||||||||| ||||||||
Sbjct: 684 aagaggtaatctggtgctgtgacgcgtaagaagttttggtctgctgc 730



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>gb|AC136492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0554F08,
            complete sequence
          Length = 166218

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 110  aagaggtaatctggtgctttgatccgcaggaagttttgctctgctgc 156
            |||||||||||||||||| |||  || | ||||||||| ||||||||
Sbjct: 9797 aagaggtaatctggtgctgtgacgcgtaagaagttttggtctgctgc 9843



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 110      aagaggtaatctggtgctttgatccgcaggaagttttgctctgctgc 156
                |||||||||||||||||| |||  || | ||||||||| ||||||||
Sbjct: 26977374 aagaggtaatctggtgctgtgacgcgtaagaagttttggtctgctgc 26977420



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>emb|AL136143.9| Human DNA sequence from clone RP3-399C22 on chromosome 20 Contains a
             putative novel gene, complete sequence
          Length = 87157

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 420   gcacttaatttctgtttctgata 442
             |||||||||||||||||||||||
Sbjct: 24041 gcacttaatttctgtttctgata 24019



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>dbj|AK100682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113L22, full
           insert sequence
          Length = 975

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 110 aagaggtaatctggtgctttgatccgcaggaagttttgctctgctgc 156
           |||||||||||||||||| |||  || | ||||||||| ||||||||
Sbjct: 685 aagaggtaatctggtgctgtgacgcgtaagaagttttggtctgctgc 731



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>dbj|AK060333.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-B08, full
           insert sequence
          Length = 1040

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 110 aagaggtaatctggtgctttgatccgcaggaagttttgctctgctgc 156
           |||||||||||||||||| |||  || | ||||||||| ||||||||
Sbjct: 684 aagaggtaatctggtgctgtgacgcgtaagaagttttggtctgctgc 730



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>gb|AC152970.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNOa0014E02, complete sequence
          Length = 33084

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 110   aagaggtaatctggtgctttgatccgcaggaagttttgctctgctgc 156
             |||||||||||||||||| |||  || | ||||||||| ||||||||
Sbjct: 23768 aagaggtaatctggtgctgtgacgcgtaagaagttttggtctgctgc 23814



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>gb|AC016525.11| Homo sapiens chromosome 15 clone RP11-358M11 map 15q21.3, complete
              sequence
          Length = 256019

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 137    aggaagttttgctctgctgcc 157
              |||||||||||||||||||||
Sbjct: 156913 aggaagttttgctctgctgcc 156893



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>gb|AC008131.25| Homo sapiens chromosome 15 clone ctd-2265b18 map 15q21, complete
             sequence
          Length = 131891

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 137   aggaagttttgctctgctgcc 157
             |||||||||||||||||||||
Sbjct: 30279 aggaagttttgctctgctgcc 30299



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>emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster
          Length = 64650

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 51    caggggcggccggtggtgctg 71
             |||||||||||||||||||||
Sbjct: 19512 caggggcggccggtggtgctg 19532



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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 52      aggggcggccggtggtgctg 71
               ||||||||||||||||||||
Sbjct: 1483526 aggggcggccggtggtgctg 1483545



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>gb|AC107241.4| Homo sapiens chromosome 15, clone CTD-2501E16, complete sequence
          Length = 105583

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 142   gttttgctctgctgccacagctta 165
             ||||||||||| ||||||||||||
Sbjct: 31983 gttttgctctgttgccacagctta 32006



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>gb|AC026789.5| Homo sapiens chromosome 5 clone CTD-2219P2, complete sequence
          Length = 176072

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 142   gttttgctctgctgccacagctta 165
             ||||||||||| ||||||||||||
Sbjct: 84917 gttttgctctgttgccacagctta 84894



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>gb|AC026727.6| Homo sapiens chromosome 5 clone CTD-2258D6, complete sequence
          Length = 176072

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 142   gttttgctctgctgccacagctta 165
             ||||||||||| ||||||||||||
Sbjct: 84917 gttttgctctgttgccacagctta 84894



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>gb|AC027273.5| Homo sapiens BAC clone RP11-764F10 from 4, complete sequence
          Length = 201621

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 202    tacccaactgagagtaatat 221
              ||||||||||||||||||||
Sbjct: 117974 tacccaactgagagtaatat 117993



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>emb|CR391992.5| Human DNA sequence from clone RP1-308E4 on chromosome 1 Contains a
             novel gene (FLJ13171) and a DnaJ (Hsp40) homolog subfamily
             C member 8 (DNAJC8) pseudogene, complete sequence
          Length = 32906

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   ggaagttttgctctgctgcc 157
             ||||||||||||||||||||
Sbjct: 15099 ggaagttttgctctgctgcc 15118



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>emb|AL031727.43|HS1056L3 Human DNA sequence from clone RP5-1056L3 on chromosome 1p35.1-36.13
              Contains a novel gene, the gene for a novel protein
              (LOC374960), a ribosomal protein S14 (RPS14) pseudogene,
              the NBL1 gene for neuroblastoma suppression of
              tumorigenicity 1, the HTR6 gene for 5-hydroxytryptamine
              (serotonin) receptor 6, the 3' end of the gene for a novel
              protein (LOC255104) (FLJ45636) and two CpG islands,
              complete sequence
          Length = 163848

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 218    atatgtcttctatcagttag 237
              ||||||||||||||||||||
Sbjct: 141173 atatgtcttctatcagttag 141192



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>emb|AL031668.23|HS64K7 Human DNA sequence from clone RP1-64K7 on chromosome 20q11.21-11.23
              Contains the EIF2S2 gene for eukaryotic translation
              initiation factor 2 subunit 2 (beta, 38kD), a novel gene,
              the 5' end of a novel gene, the 3' end of the RALY gene for
              RNA binding protein (autoantigenic, hnRNP-associated with
              lethal yellow), the RPS2P1 gene for ribosomal protein S2
              pseudogene 1 and two CpG islands, complete sequence
          Length = 139378

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    gactacaaaaacttagggta 267
              ||||||||||||||||||||
Sbjct: 130348 gactacaaaaacttagggta 130367



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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 17      aaggaggagtgcgtcgcctg 36
               ||||||||||||||||||||
Sbjct: 3486273 aaggaggagtgcgtcgcctg 3486254



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>gb|AC008549.6|AC008549 Homo sapiens chromosome 5 clone CTC-505O3, complete sequence
          Length = 205342

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 142   gttttgctctgctgccacagctta 165
             ||||||||||| ||||||||||||
Sbjct: 30762 gttttgctctgttgccacagctta 30739



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>ref|XM_557830.1| Anopheles gambiae str. PEST ENSANGP00000026826
           (ENSANGG00000022954), partial mRNA
          Length = 1428

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   ctggggtcccgaaggaggag 25
           ||||||||||||||||||||
Sbjct: 123 ctggggtcccgaaggaggag 142



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>ref|XM_310857.2| Anopheles gambiae str. PEST ENSANGP00000012466 (ENSANGG00000009977),
            partial mRNA
          Length = 1595

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   cgaaggaggagtgcgtcgcc 34
            ||||||||||||||||||||
Sbjct: 1465 cgaaggaggagtgcgtcgcc 1484


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 74,783,252
Number of extensions: 3832269
Number of successful extensions: 269815
Number of sequences better than 10.0: 33
Number of HSP's gapped: 269814
Number of HSP's successfully gapped: 43
Length of query: 480
Length of database: 18,610,659,111
Length adjustment: 22
Effective length of query: 458
Effective length of database: 18,508,616,841
Effective search space: 8476946513178
Effective search space used: 8476946513178
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 13 (26.3 bits)
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