ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf49g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AF479052.1| Triticum aestivum p60 katanin mRNA, partial cds 597 e-167
2ref|NM_001063735.1| Oryza sativa (japonica cultivar-group) Os06g... 486 e-133
3dbj|AK058549.1| Oryza sativa (japonica cultivar-group) cDNA clon... 486 e-133
4dbj|AK242209.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 448 e-122
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 198 5e-47
6dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic D... 198 5e-47
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 184 7e-43
8dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic D... 184 7e-43
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 115 5e-22
10dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic D... 115 5e-22
11ref|NM_001066128.1| Oryza sativa (japonica cultivar-group) Os07g... 113 2e-21
12dbj|AK072236.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 2e-21
13gb|AY104527.1| Zea mays PCO064500 mRNA sequence 90 3e-14
14ref|NM_001064265.1| Oryza sativa (japonica cultivar-group) Os06g... 88 1e-13
15dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic D... 88 1e-13
16dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic D... 88 1e-13
17dbj|AK100292.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 1e-13
18dbj|AK072143.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 1e-13
19ref|NM_112864.3| Arabidopsis thaliana ATP binding / ATPase/ nucl... 86 5e-13
20gb|BT014736.1| Arabidopsis thaliana At3g19740.1 mRNA sequence 86 5e-13
21ref|NM_103899.3| Arabidopsis thaliana ATP binding / ATPase/ nucl... 80 3e-11
22gb|AC015445.3|F2J10 Sequence of BAC F2J10 from Arabidopsis thali... 74 2e-09
23dbj|AP000417.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 72 7e-09
24emb|CT986058.1| partial cDNA sequence from a Lambda ZAP II norma... 70 3e-08
25gb|AY112377.1| Zea mays CL24781_1 mRNA sequence 64 2e-06
26ref|XM_001081230.1| PREDICTED: Rattus norvegicus procollagen, ty... 48 0.11
27ref|XM_213440.4| PREDICTED: Rattus norvegicus procollagen, type ... 48 0.11
28emb|Z78279.1|RNCA1T1 R.norvegicus mRNA for collagen alpha1 type I 48 0.11
29gb|AC185362.2| Populus trichocarpa clone Pop1-56N11, complete se... 46 0.42
30ref|XR_012775.1| PREDICTED: Macaca mulatta similar to pleckstrin... 46 0.42
31dbj|AP004958.1| Lotus japonicus genomic DNA, chromosome 3, clone... 46 0.42
32gb|AC189237.1| Brassica rapa subsp. pekinensis clone KBrB014O06,... 44 1.7
33emb|BX936392.23| Zebrafish DNA sequence from clone CH211-197O16 ... 44 1.7
34emb|CR847788.7| Zebrafish DNA sequence from clone CH211-249H16 i... 44 1.7
35ref|NM_199530.1| Danio rerio sec31p homolog (yeast) (sec31p), mR... 44 1.7
36gb|AC122355.4| Mus musculus BAC clone RP23-401L7 from chromosome... 44 1.7
37gb|AC124454.4| Mus musculus BAC clone RP24-228I9 from chromosome... 44 1.7
38emb|CR352251.11| Zebrafish DNA sequence from clone CH211-138M21 ... 44 1.7
39dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 1.7
40ref|XM_696951.1| PREDICTED: Danio rerio hypothetical protein LOC... 44 1.7
41emb|BX321865.1| Nitrosomonas europaea ATCC 19718, complete genom... 44 1.7
42emb|BX957309.6| Zebrafish DNA sequence from clone CH211-113P19 i... 44 1.7
43emb|AL929219.16| Mouse DNA sequence from clone RP23-53I18 on chr... 44 1.7
44emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4,... 44 1.7
45gb|AC122878.4| Mus musculus BAC clone RP23-116F15 from chromosom... 42 6.6
46gb|AC100491.9| Mus musculus chromosome 9, clone RP23-142M14, com... 42 6.6
47dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 6.6
48gb|AC053527.8| Homo sapiens BAC clone RP11-692D12 from 4, comple... 42 6.6
49emb|AL136441.16| Human DNA sequence from clone RP11-19D22 on chr... 42 6.6
50dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 42 6.6
51dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 42 6.6
52gb|AC123682.13| Mus musculus chromosome 15, clone RP23-288J22, c... 42 6.6
53gb|AC144430.14| Medicago truncatula clone mth2-16j2, complete se... 42 6.6
54gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 42 6.6
55emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa... 42 6.6
56emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chro... 42 6.6

>gb|AF479052.1| Triticum aestivum p60 katanin mRNA, partial cds
          Length = 405
 Score =  597 bits (301), Expect = e-167
 Identities = 380/405 (93%), Gaps = 1/405 (0%)
 Strand = Plus / Plus

                                                                        
Query: 936  tacggcgttttcctaggaggatatacgtcgaccttccgg-atgcgcagaataggatgaaa 994
            |||| ||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 1    tacgtcgtttgcctaggaggatatacgtggaccttccggnatgcgcagaataggatgaaa 60

                                                                        
Query: 995  attctcaagattttacttgccaaagaaaacctagaatctgaatttggattcgacgaacta 1054
            ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61   attctcaagatattacttgccaaagaaaacatagaatctgaatttggattcgacgaacta 120

                                                                        
Query: 1055 gccaatgcaacagaaggttactctgggagtgatttgaagaacctatgtgtagctgcagcg 1114
            ||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| 
Sbjct: 121  gccgatgcaacagaaggttactctgggagtgacttgaagaacctatgcgtagctgcagca 180

                                                                        
Query: 1115 tacaggccagttcatgaactgctagaagaagaaaagaaggggtctgcgggcagtacgaaa 1174
            |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 181  tacaggccagttcatgaactgctagaagaagaaaagaagggggctgtgggcagtacgaaa 240

                                                                        
Query: 1175 acttctttaaggtccttaaagctggatgactttgtccaagcgaaagccaaggtgagcccg 1234
            |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| 
Sbjct: 241  acttctttgaggtccttaaagttggatgactttgtccaagcgaaagccaaggtgagccca 300

                                                                        
Query: 1235 tccgttgctttcgacgccacgagcatgaacgagctaagaaaatggaacgaacagtacggc 1294
            || ||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||| 
Sbjct: 301  tctgttgccttcgatgccacaagcatgaacgagctaagaaaatggaacgagcagtacgga 360

                                                         
Query: 1295 gaaggcggcagcatgagcaagtcgccgttcgggttcggcacctaa 1339
            ||||||||||||| |||||| ||||| ||||||||||||| ||||
Sbjct: 361  gaaggcggcagcaggagcaaatcgccattcgggttcggcagctaa 405



to top

>ref|NM_001063735.1| Oryza sativa (japonica cultivar-group) Os06g0225900 (Os06g0225900)
            mRNA, partial cds
          Length = 1466

 Score =  486 bits (245), Expect = e-133
 Identities = 410/465 (88%)
 Strand = Plus / Plus

                                                                        
Query: 686  tggtttggagacgctgagaagctcaccaaagcccttttctcgtttgcaagtcggctagct 745
            |||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||| 
Sbjct: 455  tggtttggagacgctgagaagctcactaaggcccttttctcctttgctagtcggctagca 514

                                                                        
Query: 746  cctgttatcatatttgtggatgaggttgacagcttacttggtgcaaggggtggtgcaatg 805
            |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| | 
Sbjct: 515  cctgttatcatatttgtggacgaggttgatagcttacttggtgcaagaggtggtgcattt 574

                                                                        
Query: 806  gaacatgaagcaacgagaaggatgcgcaatgaatttatggcagcttgggatggtctaagg 865
            ||||| |||||||| ||||| ||||| |||||||| |||||||||||||||||| |||| 
Sbjct: 575  gaacacgaagcaacaagaagaatgcggaatgaattcatggcagcttgggatggtttaaga 634

                                                                        
Query: 866  tccaaagatagtcaaaggatccttattcttggtgcaacaaatcgtctgttcgatctagat 925
            |||||||| |  ||||||||||||||||||||||||||||| ||||  || |||||||||
Sbjct: 635  tccaaagagaaccaaaggatccttattcttggtgcaacaaaccgtccatttgatctagat 694

                                                                        
Query: 926  gacgctgtcatacggcgttttcctaggaggatatacgtcgaccttccggatgcgcagaat 985
            || || || || |||||||| |||||| |||||||||| |||||||||||  | ||||||
Sbjct: 695  gatgcagtaattcggcgtttacctaggcggatatacgttgaccttccggactcacagaat 754

                                                                        
Query: 986  aggatgaaaattctcaagattttacttgccaaagaaaacctagaatctgaatttggattc 1045
             | ||||||||||| |||||||||||||| ||||||||||| |||||||| ||  |||| 
Sbjct: 755  cgaatgaaaattctgaagattttacttgcaaaagaaaacctggaatctgatttcagattt 814

                                                                        
Query: 1046 gacgaactagccaatgcaacagaaggttactctgggagtgatttgaagaacctatgtgta 1105
            |||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||  | 
Sbjct: 815  gacgaactagccaatgcaactgagggttactctggtagtgacttgaagaacctatgcatc 874

                                                         
Query: 1106 gctgcagcgtacaggccagttcatgaactgctagaagaagaaaag 1150
            || || |||||||| ||||||||||| || |||||||||||||||
Sbjct: 875  gcagctgcgtacagaccagttcatgagcttctagaagaagaaaag 919



 Score =  121 bits (61), Expect = 9e-24
 Identities = 139/165 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1178 tctttaaggtccttaaagctggatgactttgtccaagcgaaagccaaggtgagcccgtcc 1237
            ||||| ||| |||||||| |||| || ||||| ||||| ||||| ||||| || || |||
Sbjct: 944  tctttgaggcccttaaagttggaggattttgtgcaagcaaaagcaaaggtaagtccatcc 1003

                                                                        
Query: 1238 gttgctttcgacgccacgagcatgaacgagctaagaaaatggaacgaacagtacggcgaa 1297
            || ||||| ||||||||||||||||||||| || ||||||||||||| |||||||| |||
Sbjct: 1004 gtcgcttttgacgccacgagcatgaacgagttacgaaaatggaacgagcagtacggggaa 1063

                                                         
Query: 1298 ggcggcagcatgagcaagtcgccgttcgggttcggcacctaacat 1342
            || || |||| ||| || || || || |||||||||| |||||||
Sbjct: 1064 ggtggaagcaggagtaaatcaccatttgggttcggcagctaacat 1108



to top

>dbj|AK058549.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-C07, full
            insert sequence
          Length = 1466

 Score =  486 bits (245), Expect = e-133
 Identities = 410/465 (88%)
 Strand = Plus / Plus

                                                                        
Query: 686  tggtttggagacgctgagaagctcaccaaagcccttttctcgtttgcaagtcggctagct 745
            |||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||| 
Sbjct: 455  tggtttggagacgctgagaagctcactaaggcccttttctcctttgctagtcggctagca 514

                                                                        
Query: 746  cctgttatcatatttgtggatgaggttgacagcttacttggtgcaaggggtggtgcaatg 805
            |||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||| | 
Sbjct: 515  cctgttatcatatttgtggacgaggttgatagcttacttggtgcaagaggtggtgcattt 574

                                                                        
Query: 806  gaacatgaagcaacgagaaggatgcgcaatgaatttatggcagcttgggatggtctaagg 865
            ||||| |||||||| ||||| ||||| |||||||| |||||||||||||||||| |||| 
Sbjct: 575  gaacacgaagcaacaagaagaatgcggaatgaattcatggcagcttgggatggtttaaga 634

                                                                        
Query: 866  tccaaagatagtcaaaggatccttattcttggtgcaacaaatcgtctgttcgatctagat 925
            |||||||| |  ||||||||||||||||||||||||||||| ||||  || |||||||||
Sbjct: 635  tccaaagagaaccaaaggatccttattcttggtgcaacaaaccgtccatttgatctagat 694

                                                                        
Query: 926  gacgctgtcatacggcgttttcctaggaggatatacgtcgaccttccggatgcgcagaat 985
            || || || || |||||||| |||||| |||||||||| |||||||||||  | ||||||
Sbjct: 695  gatgcagtaattcggcgtttacctaggcggatatacgttgaccttccggactcacagaat 754

                                                                        
Query: 986  aggatgaaaattctcaagattttacttgccaaagaaaacctagaatctgaatttggattc 1045
             | ||||||||||| |||||||||||||| ||||||||||| |||||||| ||  |||| 
Sbjct: 755  cgaatgaaaattctgaagattttacttgcaaaagaaaacctggaatctgatttcagattt 814

                                                                        
Query: 1046 gacgaactagccaatgcaacagaaggttactctgggagtgatttgaagaacctatgtgta 1105
            |||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||  | 
Sbjct: 815  gacgaactagccaatgcaactgagggttactctggtagtgacttgaagaacctatgcatc 874

                                                         
Query: 1106 gctgcagcgtacaggccagttcatgaactgctagaagaagaaaag 1150
            || || |||||||| ||||||||||| || |||||||||||||||
Sbjct: 875  gcagctgcgtacagaccagttcatgagcttctagaagaagaaaag 919



 Score =  121 bits (61), Expect = 9e-24
 Identities = 139/165 (84%)
 Strand = Plus / Plus

                                                                        
Query: 1178 tctttaaggtccttaaagctggatgactttgtccaagcgaaagccaaggtgagcccgtcc 1237
            ||||| ||| |||||||| |||| || ||||| ||||| ||||| ||||| || || |||
Sbjct: 944  tctttgaggcccttaaagttggaggattttgtgcaagcaaaagcaaaggtaagtccatcc 1003

                                                                        
Query: 1238 gttgctttcgacgccacgagcatgaacgagctaagaaaatggaacgaacagtacggcgaa 1297
            || ||||| ||||||||||||||||||||| || ||||||||||||| |||||||| |||
Sbjct: 1004 gtcgcttttgacgccacgagcatgaacgagttacgaaaatggaacgagcagtacggggaa 1063

                                                         
Query: 1298 ggcggcagcatgagcaagtcgccgttcgggttcggcacctaacat 1342
            || || |||| ||| || || || || |||||||||| |||||||
Sbjct: 1064 ggtggaagcaggagtaaatcaccatttgggttcggcagctaacat 1108



to top

>dbj|AK242209.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075170J12, full
            insert sequence
          Length = 1498

 Score =  448 bits (226), Expect = e-122
 Identities = 409/470 (87%)
 Strand = Plus / Plus

                                                                        
Query: 686  tggtttggagacgctgagaagctcaccaaagcccttttctcgtttgcaagtcggctagct 745
            ||||||||||| ||||||||| | || || ||||||||||| ||||| || ||  |||||
Sbjct: 671  tggtttggagatgctgagaagttgacaaaggcccttttctcctttgctagccgattagct 730

                                                                        
Query: 746  cctgttatcatatttgtggatgaggttgacagcttacttggtgcaaggggtggtgcaatg 805
            || ||||||||||||||||||||||||||||||||| | |||||||| ||||||||| | 
Sbjct: 731  cccgttatcatatttgtggatgaggttgacagcttattaggtgcaagaggtggtgcattt 790

                                                                        
Query: 806  gaacatgaagcaacgagaaggatgcgcaatgaatttatggcagcttgggatggtctaagg 865
            || ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 791  gagcatgaagcaacaagaaggatgcggaacgaatttatggcagcttgggatggtctaagg 850

                                                                        
Query: 866  tccaaagatagtcaaaggatccttattcttggtgcaacaaatcgtctgttcgatctagat 925
            |||||||| || ||  | ||||||||||||||||| ||||||||||  || |||||||||
Sbjct: 851  tccaaagagagccagcgaatccttattcttggtgcgacaaatcgtccatttgatctagat 910

                                                                        
Query: 926  gacgctgtcatacggcgttttcctaggaggatatacgtcgaccttccggatgcgcagaat 985
            || ||||| ||||||||||| |||||  |||||||||| |||||||| ||||| ||||| 
Sbjct: 911  gatgctgtaatacggcgtttacctagacggatatacgtggaccttccagatgcacagaac 970

                                                                        
Query: 986  aggatgaaaattctcaagattttacttgccaaagaaaacctagaatctgaatttggattc 1045
             | |||||||||||||||||||||||||| ||||||||| | |||||||| ||  |||| 
Sbjct: 971  cgaatgaaaattctcaagattttacttgctaaagaaaacttggaatctgatttcagattt 1030

                                                                        
Query: 1046 gacgaactagccaatgcaacagaaggttactctgggagtgatttgaagaacctatgtgta 1105
            || ||||| |||||| | || |||||||| || || ||||||||||||||||||||| ||
Sbjct: 1031 gatgaacttgccaattccactgaaggttattcaggaagtgatttgaagaacctatgtata 1090

                                                              
Query: 1106 gctgcagcgtacaggccagttcatgaactgctagaagaagaaaagaaggg 1155
            ||| |||| || |||||||||||||||||  |||||||||||||||||||
Sbjct: 1091 gcttcagcatataggccagttcatgaacttttagaagaagaaaagaaggg 1140



 Score = 81.8 bits (41), Expect = 8e-12
 Identities = 83/97 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1211 caagcgaaagccaaggtgagcccgtccgttgctttcgacgccacgagcatgaacgagcta 1270
            ||||| ||||||||||| |||||||| ||| | |  || || ||||||||||||||  ||
Sbjct: 1196 caagcaaaagccaaggtaagcccgtctgtttcgtatgatgcgacgagcatgaacgaatta 1255

                                                 
Query: 1271 agaaaatggaacgaacagtacggcgaaggcggcagca 1307
            |||||||||||||||||||| || ||||| |||||||
Sbjct: 1256 agaaaatggaacgaacagtatggtgaaggtggcagca 1292



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score =  198 bits (100), Expect = 5e-47
 Identities = 163/184 (88%)
 Strand = Plus / Plus

                                                                            
Query: 768      aggttgacagcttacttggtgcaaggggtggtgcaatggaacatgaagcaacgagaagga 827
                |||||||||||||| | |||||||| ||||||||| | || ||||||||||| |||||||
Sbjct: 31500316 aggttgacagcttattaggtgcaagaggtggtgcatttgagcatgaagcaacaagaagga 31500375

                                                                            
Query: 828      tgcgcaatgaatttatggcagcttgggatggtctaaggtccaaagatagtcaaaggatcc 887
                |||| || |||||||||||||||||||||||||||||||||||||| || ||  | ||||
Sbjct: 31500376 tgcggaacgaatttatggcagcttgggatggtctaaggtccaaagagagccagcgaatcc 31500435

                                                                            
Query: 888      ttattcttggtgcaacaaatcgtctgttcgatctagatgacgctgtcatacggcgttttc 947
                ||||||||||||| ||||||||||  || ||||||||||| ||||| ||||||||||| |
Sbjct: 31500436 ttattcttggtgcgacaaatcgtccatttgatctagatgatgctgtaatacggcgtttac 31500495

                    
Query: 948      ctag 951
                ||||
Sbjct: 31500496 ctag 31500499



 Score =  113 bits (57), Expect = 2e-21
 Identities = 120/141 (85%)
 Strand = Plus / Plus

                                                                            
Query: 953      aggatatacgtcgaccttccggatgcgcagaataggatgaaaattctcaagattttactt 1012
                ||||||||||| |||||||| ||||| |||||  | ||||||||||||||||||||||||
Sbjct: 31500590 aggatatacgtggaccttccagatgcacagaaccgaatgaaaattctcaagattttactt 31500649

                                                                            
Query: 1013     gccaaagaaaacctagaatctgaatttggattcgacgaactagccaatgcaacagaaggt 1072
                || ||||||||| | |||||||| ||  |||| || ||||| |||||| | || ||||||
Sbjct: 31500650 gctaaagaaaacttggaatctgatttcagatttgatgaacttgccaattccactgaaggt 31500709

                                     
Query: 1073     tactctgggagtgatttgaag 1093
                || || || ||||||||||||
Sbjct: 31500710 tattcaggaagtgatttgaag 31500730



 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                            
Query: 672      ttttctgtcaacaatggtttggagacgctgagaagctcaccaaagcccttttctcgtttg 731
                |||||| | |||| ||||||||||| ||||||||| | || || ||||||||||| ||||
Sbjct: 31500129 ttttctttgaacagtggtttggagatgctgagaagttgacaaaggcccttttctcctttg 31500188

                                                        
Query: 732      caagtcggctagctcctgttatcatatttgtggatgaggt 771
                | || ||  ||||||| |||||||||||||||||||||||
Sbjct: 31500189 ctagccgattagctcccgttatcatatttgtggatgaggt 31500228



 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                            
Query: 1092     agaacctatgtgtagctgcagcgtacaggccagttcatgaactgctagaagaagaaaaga 1151
                ||||||||||| ||||| |||| || |||||||||||||||||  |||||||||||||||
Sbjct: 31500839 agaacctatgtatagcttcagcatataggccagttcatgaacttttagaagaagaaaaga 31500898

                   
Query: 1152     agg 1154
                |||
Sbjct: 31500899 agg 31500901



 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1253     acgagcatgaacgagctaagaaaatggaacgaacagtacggcgaaggcggcagca 1307
                ||||||||||||||  |||||||||||||||||||||| || ||||| |||||||
Sbjct: 31501163 acgagcatgaacgaattaagaaaatggaacgaacagtatggtgaaggtggcagca 31501217



 Score = 42.1 bits (21), Expect = 6.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 558      ctgtctgctgctgctttacat 578
                |||||||||||||||||||||
Sbjct: 35234377 ctgtctgctgctgctttacat 35234357



to top

>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0078N11
          Length = 155168

 Score =  198 bits (100), Expect = 5e-47
 Identities = 163/184 (88%)
 Strand = Plus / Plus

                                                                          
Query: 768    aggttgacagcttacttggtgcaaggggtggtgcaatggaacatgaagcaacgagaagga 827
              |||||||||||||| | |||||||| ||||||||| | || ||||||||||| |||||||
Sbjct: 135713 aggttgacagcttattaggtgcaagaggtggtgcatttgagcatgaagcaacaagaagga 135772

                                                                          
Query: 828    tgcgcaatgaatttatggcagcttgggatggtctaaggtccaaagatagtcaaaggatcc 887
              |||| || |||||||||||||||||||||||||||||||||||||| || ||  | ||||
Sbjct: 135773 tgcggaacgaatttatggcagcttgggatggtctaaggtccaaagagagccagcgaatcc 135832

                                                                          
Query: 888    ttattcttggtgcaacaaatcgtctgttcgatctagatgacgctgtcatacggcgttttc 947
              ||||||||||||| ||||||||||  || ||||||||||| ||||| ||||||||||| |
Sbjct: 135833 ttattcttggtgcgacaaatcgtccatttgatctagatgatgctgtaatacggcgtttac 135892

                  
Query: 948    ctag 951
              ||||
Sbjct: 135893 ctag 135896



 Score =  113 bits (57), Expect = 2e-21
 Identities = 120/141 (85%)
 Strand = Plus / Plus

                                                                          
Query: 953    aggatatacgtcgaccttccggatgcgcagaataggatgaaaattctcaagattttactt 1012
              ||||||||||| |||||||| ||||| |||||  | ||||||||||||||||||||||||
Sbjct: 135987 aggatatacgtggaccttccagatgcacagaaccgaatgaaaattctcaagattttactt 136046

                                                                          
Query: 1013   gccaaagaaaacctagaatctgaatttggattcgacgaactagccaatgcaacagaaggt 1072
              || ||||||||| | |||||||| ||  |||| || ||||| |||||| | || ||||||
Sbjct: 136047 gctaaagaaaacttggaatctgatttcagatttgatgaacttgccaattccactgaaggt 136106

                                   
Query: 1073   tactctgggagtgatttgaag 1093
              || || || ||||||||||||
Sbjct: 136107 tattcaggaagtgatttgaag 136127



 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 86/100 (86%)
 Strand = Plus / Plus

                                                                          
Query: 672    ttttctgtcaacaatggtttggagacgctgagaagctcaccaaagcccttttctcgtttg 731
              |||||| | |||| ||||||||||| ||||||||| | || || ||||||||||| ||||
Sbjct: 135526 ttttctttgaacagtggtttggagatgctgagaagttgacaaaggcccttttctcctttg 135585

                                                      
Query: 732    caagtcggctagctcctgttatcatatttgtggatgaggt 771
              | || ||  ||||||| |||||||||||||||||||||||
Sbjct: 135586 ctagccgattagctcccgttatcatatttgtggatgaggt 135625



 Score = 77.8 bits (39), Expect = 1e-10
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                          
Query: 1092   agaacctatgtgtagctgcagcgtacaggccagttcatgaactgctagaagaagaaaaga 1151
              ||||||||||| ||||| |||| || |||||||||||||||||  |||||||||||||||
Sbjct: 136236 agaacctatgtatagcttcagcatataggccagttcatgaacttttagaagaagaaaaga 136295

                 
Query: 1152   agg 1154
              |||
Sbjct: 136296 agg 136298



 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 50/55 (90%)
 Strand = Plus / Plus

                                                                     
Query: 1253   acgagcatgaacgagctaagaaaatggaacgaacagtacggcgaaggcggcagca 1307
              ||||||||||||||  |||||||||||||||||||||| || ||||| |||||||
Sbjct: 136560 acgagcatgaacgaattaagaaaatggaacgaacagtatggtgaaggtggcagca 136614



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score =  184 bits (93), Expect = 7e-43
 Identities = 162/185 (87%)
 Strand = Plus / Minus

                                                                           
Query: 768     aggttgacagcttacttggtgcaaggggtggtgcaatggaacatgaagcaacgagaagga 827
               ||||||| ||||||||||||||||| ||||||||| | ||||| |||||||| ||||| |
Sbjct: 6515923 aggttgatagcttacttggtgcaagaggtggtgcatttgaacacgaagcaacaagaagaa 6515864

                                                                           
Query: 828     tgcgcaatgaatttatggcagcttgggatggtctaaggtccaaagatagtcaaaggatcc 887
               |||| |||||||| |||||||||||||||||| |||| |||||||| |  ||||||||||
Sbjct: 6515863 tgcggaatgaattcatggcagcttgggatggtttaagatccaaagagaaccaaaggatcc 6515804

                                                                           
Query: 888     ttattcttggtgcaacaaatcgtctgttcgatctagatgacgctgtcatacggcgttttc 947
               ||||||||||||||||||| ||||  || ||||||||||| || || || |||||||| |
Sbjct: 6515803 ttattcttggtgcaacaaaccgtccatttgatctagatgatgcagtaattcggcgtttac 6515744

                    
Query: 948     ctagg 952
               |||||
Sbjct: 6515743 ctagg 6515739



 Score =  145 bits (73), Expect = 6e-31
 Identities = 124/141 (87%)
 Strand = Plus / Minus

                                                                           
Query: 953     aggatatacgtcgaccttccggatgcgcagaataggatgaaaattctcaagattttactt 1012
               ||||||||||| |||||||||||  | |||||| | ||||||||||| ||||||||||||
Sbjct: 6515652 aggatatacgttgaccttccggactcacagaatcgaatgaaaattctgaagattttactt 6515593

                                                                           
Query: 1013    gccaaagaaaacctagaatctgaatttggattcgacgaactagccaatgcaacagaaggt 1072
               || ||||||||||| |||||||| ||  |||| |||||||||||||||||||| || |||
Sbjct: 6515592 gcaaaagaaaacctggaatctgatttcagatttgacgaactagccaatgcaactgagggt 6515533

                                    
Query: 1073    tactctgggagtgatttgaag 1093
               |||||||| ||||| ||||||
Sbjct: 6515532 tactctggtagtgacttgaag 6515512



 Score =  123 bits (62), Expect = 2e-24
 Identities = 80/86 (93%)
 Strand = Plus / Minus

                                                                           
Query: 686     tggtttggagacgctgagaagctcaccaaagcccttttctcgtttgcaagtcggctagct 745
               |||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||| 
Sbjct: 6516126 tggtttggagacgctgagaagctcactaaggcccttttctcctttgctagtcggctagca 6516067

                                         
Query: 746     cctgttatcatatttgtggatgaggt 771
               |||||||||||||||||||| |||||
Sbjct: 6516066 cctgttatcatatttgtggacgaggt 6516041



 Score = 95.6 bits (48), Expect = 5e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                           
Query: 1235    tccgttgctttcgacgccacgagcatgaacgagctaagaaaatggaacgaacagtacggc 1294
               ||||| ||||| ||||||||||||||||||||| || ||||||||||||| |||||||| 
Sbjct: 6515025 tccgtcgcttttgacgccacgagcatgaacgagttacgaaaatggaacgagcagtacggg 6514966

                                                               
Query: 1295    gaaggcggcagcatgagcaagtcgccgttcgggttcggcacctaacat 1342
               ||||| || |||| ||| || || || || |||||||||| |||||||
Sbjct: 6514965 gaaggtggaagcaggagtaaatcaccatttgggttcggcagctaacat 6514918



 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                            
Query: 672      ttttctgtcaacaatggtttggagacgctgagaagctcaccaaagcccttttctcgtttg 731
                |||||| | |||| ||||||||||| ||||||||| | || || ||||||||||| ||||
Sbjct: 17944120 ttttctttgaacagtggtttggagatgctgagaagttgacaaaggcccttttctcctttg 17944061

                                                        
Query: 732      caagtcggctagctcctgttatcatatttgtggatgaggt 771
                | || ||  ||||||| |||||||||||||||||||||||
Sbjct: 17944060 ctagccgattagctcccgttatcatatttgtggatgaggt 17944021



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                      
Query: 1112    gcgtacaggccagttcatgaactgctagaagaagaaaag 1150
               |||||||| ||||||||||| || |||||||||||||||
Sbjct: 6515382 gcgtacagaccagttcatgagcttctagaagaagaaaag 6515344



to top

>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0690H04
          Length = 137319

 Score =  184 bits (93), Expect = 7e-43
 Identities = 162/185 (87%)
 Strand = Plus / Minus

                                                                         
Query: 768   aggttgacagcttacttggtgcaaggggtggtgcaatggaacatgaagcaacgagaagga 827
             ||||||| ||||||||||||||||| ||||||||| | ||||| |||||||| ||||| |
Sbjct: 32299 aggttgatagcttacttggtgcaagaggtggtgcatttgaacacgaagcaacaagaagaa 32240

                                                                         
Query: 828   tgcgcaatgaatttatggcagcttgggatggtctaaggtccaaagatagtcaaaggatcc 887
             |||| |||||||| |||||||||||||||||| |||| |||||||| |  ||||||||||
Sbjct: 32239 tgcggaatgaattcatggcagcttgggatggtttaagatccaaagagaaccaaaggatcc 32180

                                                                         
Query: 888   ttattcttggtgcaacaaatcgtctgttcgatctagatgacgctgtcatacggcgttttc 947
             ||||||||||||||||||| ||||  || ||||||||||| || || || |||||||| |
Sbjct: 32179 ttattcttggtgcaacaaaccgtccatttgatctagatgatgcagtaattcggcgtttac 32120

                  
Query: 948   ctagg 952
             |||||
Sbjct: 32119 ctagg 32115



 Score =  145 bits (73), Expect = 6e-31
 Identities = 124/141 (87%)
 Strand = Plus / Minus

                                                                         
Query: 953   aggatatacgtcgaccttccggatgcgcagaataggatgaaaattctcaagattttactt 1012
             ||||||||||| |||||||||||  | |||||| | ||||||||||| ||||||||||||
Sbjct: 32028 aggatatacgttgaccttccggactcacagaatcgaatgaaaattctgaagattttactt 31969

                                                                         
Query: 1013  gccaaagaaaacctagaatctgaatttggattcgacgaactagccaatgcaacagaaggt 1072
             || ||||||||||| |||||||| ||  |||| |||||||||||||||||||| || |||
Sbjct: 31968 gcaaaagaaaacctggaatctgatttcagatttgacgaactagccaatgcaactgagggt 31909

                                  
Query: 1073  tactctgggagtgatttgaag 1093
             |||||||| ||||| ||||||
Sbjct: 31908 tactctggtagtgacttgaag 31888



 Score =  123 bits (62), Expect = 2e-24
 Identities = 80/86 (93%)
 Strand = Plus / Minus

                                                                         
Query: 686   tggtttggagacgctgagaagctcaccaaagcccttttctcgtttgcaagtcggctagct 745
             |||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||| 
Sbjct: 32502 tggtttggagacgctgagaagctcactaaggcccttttctcctttgctagtcggctagca 32443

                                       
Query: 746   cctgttatcatatttgtggatgaggt 771
             |||||||||||||||||||| |||||
Sbjct: 32442 cctgttatcatatttgtggacgaggt 32417



 Score = 95.6 bits (48), Expect = 5e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                         
Query: 1235  tccgttgctttcgacgccacgagcatgaacgagctaagaaaatggaacgaacagtacggc 1294
             ||||| ||||| ||||||||||||||||||||| || ||||||||||||| |||||||| 
Sbjct: 31401 tccgtcgcttttgacgccacgagcatgaacgagttacgaaaatggaacgagcagtacggg 31342

                                                             
Query: 1295  gaaggcggcagcatgagcaagtcgccgttcgggttcggcacctaacat 1342
             ||||| || |||| ||| || || || || |||||||||| |||||||
Sbjct: 31341 gaaggtggaagcaggagtaaatcaccatttgggttcggcagctaacat 31294



 Score = 54.0 bits (27), Expect = 0.002
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 1112  gcgtacaggccagttcatgaactgctagaagaagaaaag 1150
             |||||||| ||||||||||| || |||||||||||||||
Sbjct: 31758 gcgtacagaccagttcatgagcttctagaagaagaaaag 31720



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  115 bits (58), Expect = 5e-22
 Identities = 100/114 (87%)
 Strand = Plus / Plus

                                                                            
Query: 298      agggttcttctttcttctgcagcttataatgatgctatggtgctactttatggttgtttt 357
                |||| |||| |||||||||||||||  ||||||  ||||||||||||| |||||||||||
Sbjct: 16599041 agggatcttgtttcttctgcagcttgcaatgattatatggtgctacttgatggttgtttt 16599100

                                                                      
Query: 358      tacgaatcctggagctgtaccaggaaactggagacatgctgctgaagaggatgg 411
                 ||  ||||||| |||||||| | |||||||||||||||| |||||||||||||
Sbjct: 16599101 caccgatcctggtgctgtacctgaaaactggagacatgcttctgaagaggatgg 16599154



to top

>dbj|AP005180.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0003B09
          Length = 161813

 Score =  115 bits (58), Expect = 5e-22
 Identities = 100/114 (87%)
 Strand = Plus / Plus

                                                                         
Query: 298   agggttcttctttcttctgcagcttataatgatgctatggtgctactttatggttgtttt 357
             |||| |||| |||||||||||||||  ||||||  ||||||||||||| |||||||||||
Sbjct: 89661 agggatcttgtttcttctgcagcttgcaatgattatatggtgctacttgatggttgtttt 89720

                                                                   
Query: 358   tacgaatcctggagctgtaccaggaaactggagacatgctgctgaagaggatgg 411
              ||  ||||||| |||||||| | |||||||||||||||| |||||||||||||
Sbjct: 89721 caccgatcctggtgctgtacctgaaaactggagacatgcttctgaagaggatgg 89774



to top

>ref|NM_001066128.1| Oryza sativa (japonica cultivar-group) Os07g0467800 (Os07g0467800)
           mRNA, partial cds
          Length = 2327

 Score =  113 bits (57), Expect = 2e-21
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                       
Query: 303 tcttctttcttctgcagcttataatgatgctatggtgctactttatggttgtttttacga 362
           |||| |||||||||||||||  ||||||  ||||||||||||| ||||||||||| ||  
Sbjct: 310 tcttgtttcttctgcagcttgcaatgattatatggtgctacttgatggttgttttcaccg 369

                                                            
Query: 363 atcctggagctgtaccaggaaactggagacatgctgctgaagaggatgg 411
           ||||||| |||||||| | |||||||||||||||| |||||||||||||
Sbjct: 370 atcctggtgctgtacctgaaaactggagacatgcttctgaagaggatgg 418



to top

>dbj|AK072236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003N03, full
           insert sequence
          Length = 2328

 Score =  113 bits (57), Expect = 2e-21
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                       
Query: 303 tcttctttcttctgcagcttataatgatgctatggtgctactttatggttgtttttacga 362
           |||| |||||||||||||||  ||||||  ||||||||||||| ||||||||||| ||  
Sbjct: 311 tcttgtttcttctgcagcttgcaatgattatatggtgctacttgatggttgttttcaccg 370

                                                            
Query: 363 atcctggagctgtaccaggaaactggagacatgctgctgaagaggatgg 411
           ||||||| |||||||| | |||||||||||||||| |||||||||||||
Sbjct: 371 atcctggtgctgtacctgaaaactggagacatgcttctgaagaggatgg 419



to top

>gb|AY104527.1| Zea mays PCO064500 mRNA sequence
          Length = 596

 Score = 89.7 bits (45), Expect = 3e-14
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                       
Query: 686 tggtttggagacgctgagaagctcaccaaagcccttttctcgtttgcaagtcggctagct 745
           |||||||||||||| ||||||||||| || ||||||||||| ||||| | ||| ||||||
Sbjct: 524 tggtttggagacgcagagaagctcacaaaggcccttttctcctttgcgactcgactagct 583

                        
Query: 746 cctgttatcatat 758
           |||||||||||||
Sbjct: 584 cctgttatcatat 596



to top

>ref|NM_001064265.1| Oryza sativa (japonica cultivar-group) Os06g0509100 (Os06g0509100)
            mRNA, partial cds
          Length = 3265

 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                        
Query: 686  tggtttggagacgctgagaagctcaccaaagcccttttctcgtttgcaagtcggctagct 745
            ||||||||||| ||||||||| | || || ||||||||||| ||||| || ||  |||||
Sbjct: 1356 tggtttggagatgctgagaagttgacaaaggcccttttctcctttgctagccgattagct 1415

                                        
Query: 746  cctgttatcatatttgtggatgaggttg 773
            || |||||||||||||||||||||||||
Sbjct: 1416 cccgttatcatatttgtggatgaggttg 1443



to top

>dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0071G09
          Length = 169148

 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                         
Query: 672   ttttctgtcaacaatggtttggagacgctgagaagctcaccaaagcccttttctcgtttg 731
             |||||| | |||| ||||||||||| ||||||||| | || || ||||||||||| ||||
Sbjct: 10426 ttttctttgaacagtggtttggagatgctgagaagttgacaaaggcccttttctcctttg 10367

                                                     
Query: 732   caagtcggctagctcctgttatcatatttgtggatgaggt 771
             | || ||  ||||||| |||||||||||||||||||||||
Sbjct: 10366 ctagccgattagctcccgttatcatatttgtggatgaggt 10327



to top

>dbj|AP003618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0561B08
          Length = 161083

 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                          
Query: 672    ttttctgtcaacaatggtttggagacgctgagaagctcaccaaagcccttttctcgtttg 731
              |||||| | |||| ||||||||||| ||||||||| | || || ||||||||||| ||||
Sbjct: 149309 ttttctttgaacagtggtttggagatgctgagaagttgacaaaggcccttttctcctttg 149250

                                                      
Query: 732    caagtcggctagctcctgttatcatatttgtggatgaggt 771
              | || ||  ||||||| |||||||||||||||||||||||
Sbjct: 149249 ctagccgattagctcccgttatcatatttgtggatgaggt 149210



to top

>dbj|AK100292.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075L12, full
           insert sequence
          Length = 2886

 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                       
Query: 686 tggtttggagacgctgagaagctcaccaaagcccttttctcgtttgcaagtcggctagct 745
           ||||||||||| ||||||||| | || || ||||||||||| ||||| || ||  |||||
Sbjct: 890 tggtttggagatgctgagaagttgacaaaggcccttttctcctttgctagccgattagct 949

                                       
Query: 746 cctgttatcatatttgtggatgaggttg 773
           || |||||||||||||||||||||||||
Sbjct: 950 cccgttatcatatttgtggatgaggttg 977



to top

>dbj|AK072143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129F03, full
            insert sequence
          Length = 3267

 Score = 87.7 bits (44), Expect = 1e-13
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                        
Query: 686  tggtttggagacgctgagaagctcaccaaagcccttttctcgtttgcaagtcggctagct 745
            ||||||||||| ||||||||| | || || ||||||||||| ||||| || ||  |||||
Sbjct: 1357 tggtttggagatgctgagaagttgacaaaggcccttttctcctttgctagccgattagct 1416

                                        
Query: 746  cctgttatcatatttgtggatgaggttg 773
            || |||||||||||||||||||||||||
Sbjct: 1417 cccgttatcatatttgtggatgaggttg 1444



to top

>ref|NM_112864.3| Arabidopsis thaliana ATP binding / ATPase/
           nucleoside-triphosphatase/ nucleotide binding
           (AT3G19740) mRNA, complete cds
          Length = 1406

 Score = 85.7 bits (43), Expect = 5e-13
 Identities = 199/251 (79%)
 Strand = Plus / Plus

                                                                       
Query: 686 tggtttggagacgctgagaagctcaccaaagcccttttctcgtttgcaagtcggctagct 745
           ||||||||||| || ||||||||||| || ||  | ||||| ||||||||    ||||| 
Sbjct: 652 tggtttggagatgcagagaagctcacgaaggctttgttctcttttgcaagcaaactagcc 711

                                                                       
Query: 746 cctgttatcatatttgtggatgaggttgacagcttacttggtgcaaggggtggtgcaatg 805
           || || || |||||||| |||||||||||||| ||  | |||||  | ||||||||  | 
Sbjct: 712 cccgtcattatatttgttgatgaggttgacagtttgttgggtgctcgtggtggtgctttt 771

                                                                       
Query: 806 gaacatgaagcaacgagaaggatgcgcaatgaatttatggcagcttgggatggtctaagg 865
           || || || |||||  |||| ||| | ||||| |||||||||||||||||||| || || 
Sbjct: 772 gagcacgaggcaacacgaagaatgagaaatgagtttatggcagcttgggatggactcaga 831

                                                                       
Query: 866 tccaaagatagtcaaaggatccttattcttggtgcaacaaatcgtctgttcgatctagat 925
           || |||||||| |||||||| || ||||| ||||| || || || |  || ||||| |||
Sbjct: 832 tcaaaagatagccaaaggattctcattctcggtgccaccaaccgaccttttgatcttgat 891

                      
Query: 926 gacgctgtcat 936
           |||||||||||
Sbjct: 892 gacgctgtcat 902



to top

>gb|BT014736.1| Arabidopsis thaliana At3g19740.1 mRNA sequence
          Length = 1299

 Score = 85.7 bits (43), Expect = 5e-13
 Identities = 199/251 (79%)
 Strand = Plus / Plus

                                                                       
Query: 686 tggtttggagacgctgagaagctcaccaaagcccttttctcgtttgcaagtcggctagct 745
           ||||||||||| || ||||||||||| || ||  | ||||| ||||||||    ||||| 
Sbjct: 652 tggtttggagatgcagagaagctcacgaaggctttgttctcttttgcaagcaaactagcc 711

                                                                       
Query: 746 cctgttatcatatttgtggatgaggttgacagcttacttggtgcaaggggtggtgcaatg 805
           || || || |||||||| |||||||||||||| ||  | |||||  | ||||||||  | 
Sbjct: 712 cccgtcattatatttgttgatgaggttgacagtttgttgggtgctcgtggtggtgctttt 771

                                                                       
Query: 806 gaacatgaagcaacgagaaggatgcgcaatgaatttatggcagcttgggatggtctaagg 865
           || || || |||||  |||| ||| | ||||| |||||||||||||||||||| || || 
Sbjct: 772 gagcacgaggcaacacgaagaatgagaaatgagtttatggcagcttgggatggactcaga 831

                                                                       
Query: 866 tccaaagatagtcaaaggatccttattcttggtgcaacaaatcgtctgttcgatctagat 925
           || |||||||| |||||||| || ||||| ||||| || || || |  || ||||| |||
Sbjct: 832 tcaaaagatagccaaaggattctcattctcggtgccaccaaccgaccttttgatcttgat 891

                      
Query: 926 gacgctgtcat 936
           |||||||||||
Sbjct: 892 gacgctgtcat 902



to top

>ref|NM_103899.3| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding (AT1G50140) mRNA, complete cds
          Length = 2063

 Score = 79.8 bits (40), Expect = 3e-11
 Identities = 127/156 (81%)
 Strand = Plus / Plus

                                                                        
Query: 812  gaagcaacgagaaggatgcgcaatgaatttatggcagcttgggatggtctaaggtccaaa 871
            ||||| || ||||| ||| | ||||| || |||||||||||||| || || ||||| |||
Sbjct: 1402 gaagctaccagaagaatgagaaatgagttcatggcagcttgggacgggctcaggtcaaaa 1461

                                                                        
Query: 872  gatagtcaaaggatccttattcttggtgcaacaaatcgtctgttcgatctagatgacgct 931
            || || ||||||||||| ||||||||||| || || ||||  || ||||| ||||| |||
Sbjct: 1462 gacagccaaaggatcctcattcttggtgccaccaaccgtccctttgatcttgatgatgct 1521

                                                
Query: 932  gtcatacggcgttttcctaggaggatatacgtcgac 967
            ||||| || ||| | || ||| ||||||| ||||||
Sbjct: 1522 gtcattcgtcgtctaccaaggcggatatatgtcgac 1557



 Score = 50.1 bits (25), Expect = 0.027
 Identities = 67/81 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1067 gaaggttactctgggagtgatttgaagaacctatgtgtagctgcagcgtacaggccagtt 1126
            |||||||| || || || ||| ||||||| |||||  | ||||| ||||||||||| |||
Sbjct: 1657 gaaggttattccggtagcgatctgaagaatctatgcattgctgctgcgtacaggcctgtt 1716

                                 
Query: 1127 catgaactgctagaagaagaa 1147
            || |||||| || ||||||||
Sbjct: 1717 caagaactgttacaagaagaa 1737



 Score = 42.1 bits (21), Expect = 6.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 1259 atgaacgagctaagaaaatggaacgaacagtacggcgaaggcggcagca 1307
            ||||| ||||| |||||||||||||| || || || ||||| |||||||
Sbjct: 1849 atgaatgagctgagaaaatggaacgagcaatatggtgaaggaggcagca 1897



to top

>gb|AC015445.3|F2J10 Sequence of BAC F2J10 from Arabidopsis thaliana chromosome 1,
            complete sequence
          Length = 91720

 Score = 73.8 bits (37), Expect = 2e-09
 Identities = 103/125 (82%)
 Strand = Plus / Plus

                                                                        
Query: 812  gaagcaacgagaaggatgcgcaatgaatttatggcagcttgggatggtctaaggtccaaa 871
            ||||| || ||||| ||| | ||||| || |||||||||||||| || || ||||| |||
Sbjct: 5235 gaagctaccagaagaatgagaaatgagttcatggcagcttgggacgggctcaggtcaaaa 5294

                                                                        
Query: 872  gatagtcaaaggatccttattcttggtgcaacaaatcgtctgttcgatctagatgacgct 931
            || || ||||||||||| ||||||||||| || || ||||  || ||||| ||||| |||
Sbjct: 5295 gacagccaaaggatcctcattcttggtgccaccaaccgtccctttgatcttgatgatgct 5354

                 
Query: 932  gtcat 936
            |||||
Sbjct: 5355 gtcat 5359



 Score = 44.1 bits (22), Expect = 1.7
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 1106 gctgcagcgtacaggccagttcatgaactgctagaagaagaa 1147
            ||||| ||||||||||| ||||| |||||| || ||||||||
Sbjct: 5711 gctgctgcgtacaggcctgttcaagaactgttacaagaagaa 5752



 Score = 42.1 bits (21), Expect = 6.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 1259 atgaacgagctaagaaaatggaacgaacagtacggcgaaggcggcagca 1307
            ||||| ||||| |||||||||||||| || || || ||||| |||||||
Sbjct: 6085 atgaatgagctgagaaaatggaacgagcaatatggtgaaggaggcagca 6133



to top

>dbj|AP000417.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MMB12
          Length = 73977

 Score = 71.9 bits (36), Expect = 7e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                         
Query: 833   aatgaatttatggcagcttgggatggtctaaggtccaaagatagtcaaaggatccttatt 892
             ||||| |||||||||||||||||||| || || || |||||||| |||||||| || |||
Sbjct: 63555 aatgagtttatggcagcttgggatggactcagatcaaaagatagccaaaggattctcatt 63496

                                                         
Query: 893   cttggtgcaacaaatcgtctgttcgatctagatgacgctgtcat 936
             || ||||| || || || |  || ||||| ||||||||||||||
Sbjct: 63495 ctcggtgccaccaaccgaccttttgatcttgatgacgctgtcat 63452



to top

>emb|CT986058.1| partial cDNA sequence from a Lambda ZAP II normalized full-length
            cDNA library of differentiating xylem from Eucalyptus
            gunnii
          Length = 835

 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 71/83 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1073 tactctgggagtgatttgaagaacctatgtgtagctgcagcgtacaggccagttcatgaa 1132
            ||||||||||||||||| |||||||| ||| | ||||| || || ||||| || || |||
Sbjct: 232  tactctgggagtgatttaaagaacctttgtattgctgctgcctataggcctgtccaagaa 291

                                   
Query: 1133 ctgctagaagaagaaaagaaggg 1155
            || ||||| ||||||||||||||
Sbjct: 292  cttctagaggaagaaaagaaggg 314



 Score = 60.0 bits (30), Expect = 3e-05
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                          
Query: 1254 cgagcatgaacgagctaagaaaatggaacgaacagtacggcgaagg 1299
            |||||||||||||||| ||||| ||||| ||||||||||| |||||
Sbjct: 410  cgagcatgaacgagctcagaaagtggaatgaacagtacggagaagg 455



to top

>gb|AY112377.1| Zea mays CL24781_1 mRNA sequence
          Length = 720

 Score = 63.9 bits (32), Expect = 2e-06
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                        
Query: 1091 aagaacctatgtgtagctgcagcgtacaggccagttcatgaact 1134
            ||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 693  aagaacctatgtgtagctgcagcatataggccagtccatgaact 650



 Score = 46.1 bits (23), Expect = 0.42
 Identities = 89/111 (80%)
 Strand = Plus / Minus

                                                                        
Query: 1197 tggatgactttgtccaagcgaaagccaaggtgagcccgtccgttgctttcgacgccacga 1256
            ||||||| ||| ||||||| ||||| ||||| ||| |||| ||| |||  || || || |
Sbjct: 587  tggatgattttatccaagcaaaagctaaggttagctcgtctgtttcttatgatgcaacaa 528

                                                               
Query: 1257 gcatgaacgagctaagaaaatggaacgaacagtacggcgaaggcggcagca 1307
            | ||||| ||  | |||||||||||||| ||||| || ||||| |||||||
Sbjct: 527  gtatgaatgaattgagaaaatggaacgagcagtatggggaaggtggcagca 477



to top

>ref|XM_001081230.1| PREDICTED: Rattus norvegicus procollagen, type 1, alpha 1 (Col1a1),
            mRNA
          Length = 5862

 Score = 48.1 bits (24), Expect = 0.11
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 607  cttgtgtgaattttcttttcctga 630
            ||||||||||||||||||||||||
Sbjct: 5507 cttgtgtgaattttcttttcctga 5530



to top

>ref|XM_213440.4| PREDICTED: Rattus norvegicus procollagen, type 1, alpha 1 (Col1a1),
            mRNA
          Length = 5862

 Score = 48.1 bits (24), Expect = 0.11
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 607  cttgtgtgaattttcttttcctga 630
            ||||||||||||||||||||||||
Sbjct: 5507 cttgtgtgaattttcttttcctga 5530



to top

>emb|Z78279.1|RNCA1T1 R.norvegicus mRNA for collagen alpha1 type I
          Length = 5721

 Score = 48.1 bits (24), Expect = 0.11
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 607  cttgtgtgaattttcttttcctga 630
            ||||||||||||||||||||||||
Sbjct: 5363 cttgtgtgaattttcttttcctga 5386



to top

>gb|AC185362.2| Populus trichocarpa clone Pop1-56N11, complete sequence
          Length = 101630

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 1138  agaagaagaaaagaaggggtctg 1160
             |||||||||||||||||||||||
Sbjct: 74447 agaagaagaaaagaaggggtctg 74469



to top

>ref|XR_012775.1| PREDICTED: Macaca mulatta similar to pleckstrin homology domain
            containing, family G, member 3 (LOC708025), mRNA
          Length = 8561

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 583  gaagccaaatatcgaagctcatctctt 609
            ||||||||||||||||||||| |||||
Sbjct: 4070 gaagccaaatatcgaagctcacctctt 4096



to top

>dbj|AP004958.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT20B10, TM0135,
             complete sequence
          Length = 96988

 Score = 46.1 bits (23), Expect = 0.42
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                         
Query: 686   tggtttggagacgctgagaagctcaccaaagcccttttctcgtttgcaagtcggctagct 745
             ||||||||||| ||||| ||  | |||||||| |||||||| ||||| ||   ||| |||
Sbjct: 69279 tggtttggagatgctgaaaaattaaccaaagcacttttctcatttgccagcaagcttgct 69220

                                    
Query: 746   cctgttatcatatttgtggatga 768
             ||||| || |||||||| |||||
Sbjct: 69219 cctgtcattatatttgttgatga 69197



to top

>gb|AC189237.1| Brassica rapa subsp. pekinensis clone KBrB014O06, complete sequence
          Length = 105067

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                       
Query: 746   cctgttatcatatttgtggatgaggttgacagcttacttggt 787
             |||| |||||| ||| | ||||||||||||||||| ||||||
Sbjct: 87838 cctgctatcatttttatcgatgaggttgacagctttcttggt 87879



to top

>emb|BX936392.23| Zebrafish DNA sequence from clone CH211-197O16 in linkage group 10,
              complete sequence
          Length = 180785

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 553    ctgttctgtctgctgctgcttt 574
              ||||||||||||||||||||||
Sbjct: 175882 ctgttctgtctgctgctgcttt 175861



to top

>emb|CR847788.7| Zebrafish DNA sequence from clone CH211-249H16 in linkage group 10,
              complete sequence
          Length = 176964

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 553    ctgttctgtctgctgctgcttt 574
              ||||||||||||||||||||||
Sbjct: 132885 ctgttctgtctgctgctgcttt 132864



to top

>ref|NM_199530.1| Danio rerio sec31p homolog (yeast) (sec31p), mRNA
 gb|BC054909.1| Danio rerio sec31p homolog (yeast), mRNA (cDNA clone MGC:63547
            IMAGE:3816412), complete cds
          Length = 4443

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 553  ctgttctgtctgctgctgcttt 574
            ||||||||||||||||||||||
Sbjct: 1131 ctgttctgtctgctgctgcttt 1152



to top

>gb|AC122355.4| Mus musculus BAC clone RP23-401L7 from chromosome 14, complete sequence
          Length = 198831

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 616    attttcttttcctgaaatgcat 637
              ||||||||||||||||||||||
Sbjct: 171172 attttcttttcctgaaatgcat 171193



to top

>gb|AC124454.4| Mus musculus BAC clone RP24-228I9 from chromosome 14, complete
            sequence
          Length = 155657

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 616  attttcttttcctgaaatgcat 637
            ||||||||||||||||||||||
Sbjct: 7561 attttcttttcctgaaatgcat 7582



to top

>emb|CR352251.11| Zebrafish DNA sequence from clone CH211-138M21 in linkage group 10,
              complete sequence
          Length = 175847

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 553    ctgttctgtctgctgctgcttt 574
              ||||||||||||||||||||||
Sbjct: 141221 ctgttctgtctgctgctgcttt 141200



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 70       aaatggtatatgttttcttcaa 91
                ||||||||||||||||||||||
Sbjct: 35371533 aaatggtatatgttttcttcaa 35371554



to top

>ref|XM_696951.1| PREDICTED: Danio rerio hypothetical protein LOC555087 (LOC555087),
            mRNA
          Length = 2188

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 553  ctgttctgtctgctgctgcttt 574
            ||||||||||||||||||||||
Sbjct: 1130 ctgttctgtctgctgctgcttt 1151



to top

>emb|BX321865.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 10/10
          Length = 66094

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 550   tcactgttctgtctgctgctgc 571
             ||||||||||||||||||||||
Sbjct: 65817 tcactgttctgtctgctgctgc 65796



to top

>emb|BX957309.6| Zebrafish DNA sequence from clone CH211-113P19 in linkage group 13,
             complete sequence
          Length = 169630

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 272   ttgttgcatctctgttctgctc 293
             ||||||||||||||||||||||
Sbjct: 94523 ttgttgcatctctgttctgctc 94544



to top

>emb|AL929219.16| Mouse DNA sequence from clone RP23-53I18 on chromosome 2, complete
              sequence
          Length = 164107

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 67     gacaaatggtatatgttttctt 88
              ||||||||||||||||||||||
Sbjct: 161127 gacaaatggtatatgttttctt 161148



to top

>emb|AL606637.3|OSJN00076 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039K24,
              complete sequence
          Length = 173770

 Score = 44.1 bits (22), Expect = 1.7
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 70     aaatggtatatgttttcttcaa 91
              ||||||||||||||||||||||
Sbjct: 167377 aaatggtatatgttttcttcaa 167398



to top

>gb|AC122878.4| Mus musculus BAC clone RP23-116F15 from chromosome 14, complete sequence
          Length = 226611

 Score = 42.1 bits (21), Expect = 6.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 639    cattatttcacaactttaatt 659
              |||||||||||||||||||||
Sbjct: 114510 cattatttcacaactttaatt 114530



to top

>gb|AC100491.9| Mus musculus chromosome 9, clone RP23-142M14, complete sequence
          Length = 222845

 Score = 42.1 bits (21), Expect = 6.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 266   cctgctttgttgcatctctgt 286
             |||||||||||||||||||||
Sbjct: 28081 cctgctttgttgcatctctgt 28061



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 42.1 bits (21), Expect = 6.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 128     caaaattgacaggtttttgcg 148
               |||||||||||||||||||||
Sbjct: 3366225 caaaattgacaggtttttgcg 3366245



to top

>gb|AC053527.8| Homo sapiens BAC clone RP11-692D12 from 4, complete sequence
          Length = 233250

 Score = 42.1 bits (21), Expect = 6.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 985    taggatgaaaattctcaagatttta 1009
              ||||||||||||||| |||||||||
Sbjct: 145146 taggatgaaaattcttaagatttta 145122



to top

>emb|AL136441.16| Human DNA sequence from clone RP11-19D22 on chromosome 13q22.1-22.3
             Contains a CpG island, complete sequence
          Length = 180992

 Score = 42.1 bits (21), Expect = 6.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 982   gaataggatgaaaattctcaagatt 1006
             ||||||||||||||||| |||||||
Sbjct: 52701 gaataggatgaaaattcacaagatt 52725



to top

>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0474F11
          Length = 139544

 Score = 42.1 bits (21), Expect = 6.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 558   ctgtctgctgctgctttacat 578
             |||||||||||||||||||||
Sbjct: 46427 ctgtctgctgctgctttacat 46407



to top

>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1202_E07
          Length = 145014

 Score = 42.1 bits (21), Expect = 6.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 558    ctgtctgctgctgctttacat 578
              |||||||||||||||||||||
Sbjct: 129733 ctgtctgctgctgctttacat 129713



to top

>gb|AC123682.13| Mus musculus chromosome 15, clone RP23-288J22, complete sequence
          Length = 170303

 Score = 42.1 bits (21), Expect = 6.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 97    acacatgagaaatcactgatg 117
             |||||||||||||||||||||
Sbjct: 88364 acacatgagaaatcactgatg 88384



to top

>gb|AC144430.14| Medicago truncatula clone mth2-16j2, complete sequence
          Length = 125368

 Score = 42.1 bits (21), Expect = 6.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 636   atccattatttcacaactttaattcactaccat 668
             |||||||||| ||||||||||||| | ||||||
Sbjct: 95847 atccattattgcacaactttaatttaataccat 95815



to top

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 42.1 bits (21), Expect = 6.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1289   tacggcgaaggcggcagcatg 1309
              |||||||||||||||||||||
Sbjct: 824684 tacggcgaaggcggcagcatg 824704



to top

>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137936

 Score = 42.1 bits (21), Expect = 6.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 128   caaaattgacaggtttttgcg 148
             |||||||||||||||||||||
Sbjct: 45278 caaaattgacaggtttttgcg 45298



to top

>emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chromosome 4, complete
             sequence
          Length = 202412

 Score = 42.1 bits (21), Expect = 6.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 659   tcactaccatcatttttctgt 679
             |||||||||||||||||||||
Sbjct: 68357 tcactaccatcatttttctgt 68337


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 312,372,879
Number of extensions: 16940082
Number of successful extensions: 337533
Number of sequences better than 10.0: 56
Number of HSP's gapped: 337526
Number of HSP's successfully gapped: 85
Length of query: 1723
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1700
Effective length of database: 18,503,978,556
Effective search space: 31456763545200
Effective search space used: 31456763545200
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top