ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf52b01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001054158.1| Oryza sativa (japonica cultivar-group) Os02g0656200 (Os02g0656200) mRNA, complete cds Length = 1962 Score = 777 bits (392), Expect = 0.0 Identities = 785/916 (85%) Strand = Plus / Plus Query: 713 atcaagtgcccttagtctccttcccaaatgattggtttaggcttggcataattccttctg 772 |||| ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 956 atcaggtgcctttagtctccttcccaaataattggtttaggcttggaataattccttctg 1015 Query: 773 gctcaacagatgctattgtactcagcacaactggggaacgagatgctgtgacttctgccc 832 ||||||| ||||||||||| ||||| ||||||||||| |||||| ||||||||||||| | Sbjct: 1016 gctcaacggatgctattgttctcagtacaactggggagcgagatcctgtgacttctgctc 1075 Query: 833 tgctaattatccttggtagaaggatgtcgcttgatatagctcaagtagtcaggtggaaga 892 |||| |||||||| || |||||||| || ||||||||||||||||| ||||| ||||| | Sbjct: 1076 tgcttattatcctcggcagaaggatatcacttgatatagctcaagttgtcagatggaaaa 1135 Query: 893 gtagcccatcagctgaggtcttacctaccgtacgctatgcggcttcatttgcaggatatg 952 ||||||||||||||||||| | ||| || || |||||||| ||||| ||||||||||||| Sbjct: 1136 gtagcccatcagctgaggtttcaccaactgtgcgctatgctgcttcgtttgcaggatatg 1195 Query: 953 gattttatggagaagtcataagggagagtgaaaactaccgatggatggggcccgcacgtt 1012 |||||||||||||||| ||||||||||||||||| ||| | |||||||| || || || | Sbjct: 1196 gattttatggagaagttataagggagagtgaaaagtacaggtggatgggtcctgcgcgat 1255 Query: 1013 atgatttttctggaactatggtctttctgaagcacagatcttatgatgcaaaagtggcct 1072 |||| || |||||||| ||||| ||| ||||||||||||||||||| ||||||||||| | Sbjct: 1256 atgacttctctggaacaatggtatttttgaagcacagatcttatgaggcaaaagtggctt 1315 Query: 1073 ttcttgagaatgagaactctctttcacttgctgcatcagcagagaatgttgcagatgaag 1132 ||||||| |||| ||| ||| ||||||| | ||||| ||||||||| |||| ||| || Sbjct: 1316 ttcttgaaaatggaaacactcattcacttacagcatcggcagagaataatgcaaatggag 1375 Query: 1133 tacaaccactacaatcacgtagaaaaagacctcgtaaaacaatttgccgagcaaattgtt 1192 | ||| |||| |||| | | ||| |||| ||| ||||| || |||||| ||||||||| Sbjct: 1376 tccaaacactgcaataccatcaaaatagacatcggaaaaccatctgccgaacaaattgtt 1435 Query: 1193 ctgtatgcaaagaaaattcaatgcccgaacaaaattcagaagatgagattccaaacagct 1252 ||||||||| || ||||| | ||||| |||||||||||||| | |||| |||| | Sbjct: 1436 taatatgcaaaggaacttcaacatctgaacagaattcagaagatgaaaatccagacagtt 1495 Query: 1253 cccaaactatttatgacaacccaaaatgggtctggtccgaggggcgttttctcagtgtcg 1312 || ||| || ||| | ||||||||||||||||||| |||| |||||||||||||| | Sbjct: 1496 ccagaacagcttgtgagaccccaaaatgggtctggtccaagggtcgttttctcagtgttg 1555 Query: 1313 gtgcagctgtcatttcatgtcgcaatgaaagagcccctgatggcctagtggctgaagcac 1372 |||||||||||||||||||||| || ||||||||||||||||| ||||| ||||| |||| Sbjct: 1556 gtgcagctgtcatttcatgtcgtaacgaaagagcccctgatggtctagtagctgacgcac 1615 Query: 1373 acctctcagatggttttcttcatcttctgctcattagagattgccctcttccgttatact 1432 |||| || |||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct: 1616 acctatctgatggttttcttcatcttctgctcattagagattgccctcttcccttttact 1675 Query: 1433 tatggcatctgacacaatttactaagaagggatcggaccccctaaccttcaactttgttg 1492 |||||||||| ||||||||||| |||||||| || || || || | |||||| ||||| | Sbjct: 1676 tatggcatctaacacaatttaccaagaagggctcagatcctctgagcttcaagtttgtcg 1735 Query: 1493 aacatcataagacgcgagcatttaccttcatttcatcacacaacgaaagtgtatggaact 1552 ||||||||||||| | ||||||||| || || || ||||| |||||||||| ||||||| Sbjct: 1736 aacatcataagacacaagcatttacttttatatcgtcacatgacgaaagtgtctggaact 1795 Query: 1553 tggatggcgagctttttcaggcctgcgaagtgtctgttcaagcttgccgcggccttgttt 1612 |||| || || ||| |||||||||| || || ||||||||||||| ||| |||||||| Sbjct: 1796 tggacggagaacttcttcaggcctgtgaggtatctgttcaagctttccgaggccttgtca 1855 Query: 1613 acctcttcgcgtcagg 1628 ||||||| |||||||| Sbjct: 1856 acctctttgcgtcagg 1871 Score = 305 bits (154), Expect = 3e-79 Identities = 418/506 (82%) Strand = Plus / Plus Query: 158 gttcttcatgttggtcatctatcggactactaccaaaattggagaacaaaatcaagtttt 217 ||||||||||||||||||||||| | | | ||| || || |||| ||| | ||||||| Sbjct: 164 gttcttcatgttggtcatctatcataatgcaacctaagttagagagcaagcttaagtttt 223 Query: 218 tggatgtttatgctgtggagcttcttgatgaaggtcctgtatgtggaccttggaatacaa 277 ||||| |||||||| ||||||||||| | ||||||||||||| |||||||||| ||| Sbjct: 224 cagatgtctatgctgtagagcttcttgaggtgggtcctgtatgtgaaccttggaatgcaa 283 Query: 278 gaattgtcgtccaaggcaagaaaaatactgagatgcaccggtttgccgtacatgtaatca 337 || | ||| |||||||||| ||||||||||||| |||| |||| | |||| ||| Sbjct: 284 gagctaccgttcaaggcaagataaatactgagatgaaccgatttgtcatacacacggtca 343 Query: 338 ccaggtcaagaaaacacccttctcagtgggtaccttgtgaatatctttttggacacaaag 397 | || |||||||| || |||| |||||||||||||||||| ||||||| || |||| Sbjct: 344 caagaccaagaaaaagaccatctccatgggtaccttgtgaatatatttttggtcataaag 403 Query: 398 acccggagacctgcaaaagctgggctgagcatctcagtgcatgcataaataatgaacagg 457 ||| | | |||||||||| |||| |||||| | | | ||||||||||| ||||||| Sbjct: 404 accagcaaacctgcaaaacttgggtggagcatataaagacgtgcataaataaggaacagg 463 Query: 458 acaggccaaagaacctgatggtatttgtccatccactgtgtggaaaaggtagaggttgca 517 | ||||| |||| ||| |||||||||||||||||| ||||||||||||||||||| || | Sbjct: 464 ataggcccaagagcctcatggtatttgtccatccattgtgtggaaaaggtagagggtgta 523 Query: 518 aaaattgggaaatggtagctccgttatttgaccaggcgaaagtaaatacaaaggtgataa 577 | |||||||||| |||||||| |||||||| | ||| |||||||| || ||||||||| Sbjct: 524 agaattgggaaacagtagctccattatttgagcgggcaaaagtaaaaacgaaggtgatag 583 Query: 578 tcaccgagggagcaggacatgcatatgacaccttagcatcaatatcagataaagagctca 637 |||| || ||||||||||||||||||| || |||||||| ||||||||||||| |||| Sbjct: 584 tcacacagcgagcaggacatgcatatgatactttagcatctttatcagataaagatctca 643 Query: 638 agaaatttgatggtgttgttgcagtg 663 ||||||||||||||||| |||||||| Sbjct: 644 agaaatttgatggtgttattgcagtg 669 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 66 cggcgaggtgctgttcctgggcggcgtcggagaggtcaccgtcaccctcggccacgacgg 125 |||||||| ||| ||||||| ||||||||| |||||||| || || ||||| ||||||| Sbjct: 12 cggcgaggcgctcttcctggacggcgtcggggaggtcacggtggccgtcggcgacgacgg 71 Query: 126 cctctccttcc 136 ||||||||||| Sbjct: 72 cctctccttcc 82
>dbj|AK241507.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065168E20, full insert sequence Length = 2706 Score = 523 bits (264), Expect = e-145 Identities = 588/696 (84%) Strand = Plus / Plus Query: 947 gatatggattttatggagaagtcataagggagagtgaaaactaccgatggatggggcccg 1006 |||||||||||||||||||||| ||||||||||||||||| ||| | |||||||| || | Sbjct: 1836 gatatggattttatggagaagttataagggagagtgaaaagtacaggtggatgggtcctg 1895 Query: 1007 cacgttatgatttttctggaactatggtctttctgaagcacagatcttatgatgcaaaag 1066 | || ||||| || |||||||| ||||| ||| ||||||||||||||||||| ||||||| Sbjct: 1896 cgcgatatgacttctctggaacaatggtatttttgaagcacagatcttatgaggcaaaag 1955 Query: 1067 tggcctttcttgagaatgagaactctctttcacttgctgcatcagcagagaatgttgcag 1126 |||| |||||||| |||| ||| ||| ||||||| | ||||| ||||||||| |||| Sbjct: 1956 tggcttttcttgaaaatggaaacactcattcacttacagcatcggcagagaataatgcaa 2015 Query: 1127 atgaagtacaaccactacaatcacgtagaaaaagacctcgtaaaacaatttgccgagcaa 1186 ||| ||| ||| |||| |||| | | ||| |||| ||| ||||| || |||||| ||| Sbjct: 2016 atggagtccaaacactgcaataccatcaaaatagacatcggaaaaccatctgccgaacaa 2075 Query: 1187 attgttctgtatgcaaagaaaattcaatgcccgaacaaaattcagaagatgagattccaa 1246 |||||| ||||||||| || ||||| | ||||| |||||||||||||| | |||| Sbjct: 2076 attgtttaatatgcaaaggaacttcaacatctgaacagaattcagaagatgaaaatccag 2135 Query: 1247 acagctcccaaactatttatgacaacccaaaatgggtctggtccgaggggcgttttctca 1306 |||| ||| ||| || ||| | ||||||||||||||||||| |||| |||||||||| Sbjct: 2136 acagttccagaacagcttgtgagaccccaaaatgggtctggtccaagggtcgttttctca 2195 Query: 1307 gtgtcggtgcagctgtcatttcatgtcgcaatgaaagagcccctgatggcctagtggctg 1366 |||| ||||||||||||||||||||||| || ||||||||||||||||| ||||| |||| Sbjct: 2196 gtgttggtgcagctgtcatttcatgtcgtaacgaaagagcccctgatggtctagtagctg 2255 Query: 1367 aagcacacctctcagatggttttcttcatcttctgctcattagagattgccctcttccgt 1426 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2256 acgcacacctatctgatggttttcttcatcttctgctcattagagattgccctcttccct 2315 Query: 1427 tatacttatggcatctgacacaatttactaagaagggatcggaccccctaaccttcaact 1486 | |||||||||||||| ||||||||||| |||||||| || || || || | |||||| | Sbjct: 2316 tttacttatggcatctaacacaatttaccaagaagggctcagatcctctgagcttcaagt 2375 Query: 1487 ttgttgaacatcataagacgcgagcatttaccttcatttcatcacacaacgaaagtgtat 1546 |||| |||||||||||||| | ||||||||| || || || ||||| |||||||||| | Sbjct: 2376 ttgtcgaacatcataagacacaagcatttacttttatatcgtcacatgacgaaagtgtct 2435 Query: 1547 ggaacttggatggcgagctttttcaggcctgcgaagtgtctgttcaagcttgccgcggcc 1606 |||||||||| || || ||| |||||||||| || || ||||||||||||| ||| |||| Sbjct: 2436 ggaacttggacggagaacttcttcaggcctgtgaggtatctgttcaagctttccgaggcc 2495 Query: 1607 ttgtttacctcttcgcgtcagggccagaggtgtagc 1642 |||| ||||||| |||||||| || |||||||||| Sbjct: 2496 ttgtcaacctctttgcgtcaggaccggaggtgtagc 2531 Score = 361 bits (182), Expect = 7e-96 Identities = 494/598 (82%) Strand = Plus / Plus Query: 66 cggcgaggtgctgttcctgggcggcgtcggagaggtcaccgtcaccctcggccacgacgg 125 |||||||| ||| ||||||| ||||||||| |||||||| || || ||||| ||||||| Sbjct: 96 cggcgaggcgctcttcctggacggcgtcggggaggtcacggtggccgtcggcgacgacgg 155 Query: 126 cctctccttcctccctctccacccggaattgggttcttcatgttggtcatctatcggact 185 ||||||||||| || || |||| |||| || ||||||||||||||||||||||| | | Sbjct: 156 cctctccttccagccccttcaccaggaagtgagttcttcatgttggtcatctatcataat 215 Query: 186 actaccaaaattggagaacaaaatcaagtttttggatgtttatgctgtggagcttcttga 245 | ||| || || |||| ||| | ||||||| ||||| |||||||| ||||||||||| Sbjct: 216 gcaacctaagttagagagcaagcttaagttttcagatgtctatgctgtagagcttcttga 275 Query: 246 tgaaggtcctgtatgtggaccttggaatacaagaattgtcgtccaaggcaagaaaaatac 305 | ||||||||||||| |||||||||| ||||| | ||| |||||||||| |||||| Sbjct: 276 ggtgggtcctgtatgtgaaccttggaatgcaagagctaccgttcaaggcaagataaatac 335 Query: 306 tgagatgcaccggtttgccgtacatgtaatcaccaggtcaagaaaacacccttctcagtg 365 ||||||| |||| |||| | |||| |||| || |||||||| || |||| || Sbjct: 336 tgagatgaaccgatttgtcatacacacggtcacaagaccaagaaaaagaccatctccatg 395 Query: 366 ggtaccttgtgaatatctttttggacacaaagacccggagacctgcaaaagctgggctga 425 |||||||||||||||| ||||||| || ||||||| | | |||||||||| |||| || Sbjct: 396 ggtaccttgtgaatatatttttggtcataaagaccagcaaacctgcaaaacttgggtgga 455 Query: 426 gcatctcagtgcatgcataaataatgaacaggacaggccaaagaacctgatggtatttgt 485 |||| | | | ||||||||||| |||||||| ||||| |||| ||| ||||||||||| Sbjct: 456 gcatataaagacgtgcataaataaggaacaggataggcccaagagcctcatggtatttgt 515 Query: 486 ccatccactgtgtggaaaaggtagaggttgcaaaaattgggaaatggtagctccgttatt 545 ||||||| ||||||||||||||||||| || || |||||||||| |||||||| ||||| Sbjct: 516 ccatccattgtgtggaaaaggtagagggtgtaagaattgggaaacagtagctccattatt 575 Query: 546 tgaccaggcgaaagtaaatacaaaggtgataatcaccgagggagcaggacatgcatatga 605 ||| | ||| |||||||| || ||||||||| |||| || ||||||||||||||||||| Sbjct: 576 tgagcgggcaaaagtaaaaacgaaggtgatagtcacacagcgagcaggacatgcatatga 635 Query: 606 caccttagcatcaatatcagataaagagctcaagaaatttgatggtgttgttgcagtg 663 || |||||||| ||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 636 tactttagcatctttatcagataaagatctcaagaaatttgatggtgttattgcagtg 693 Score = 270 bits (136), Expect = 2e-68 Identities = 214/240 (89%) Strand = Plus / Plus Query: 713 atcaagtgcccttagtctccttcccaaatgattggtttaggcttggcataattccttctg 772 |||| ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 980 atcaggtgcctttagtctccttcccaaataattggtttaggcttggaataattccttctg 1039 Query: 773 gctcaacagatgctattgtactcagcacaactggggaacgagatgctgtgacttctgccc 832 ||||||| ||||||||||| ||||| ||||||||||| |||||| ||||||||||||| | Sbjct: 1040 gctcaacggatgctattgttctcagtacaactggggagcgagatcctgtgacttctgctc 1099 Query: 833 tgctaattatccttggtagaaggatgtcgcttgatatagctcaagtagtcaggtggaaga 892 |||| |||||||| || |||||||| || ||||||||||||||||| ||||| ||||| | Sbjct: 1100 tgcttattatcctcggcagaaggatatcacttgatatagctcaagttgtcagatggaaaa 1159 Query: 893 gtagcccatcagctgaggtcttacctaccgtacgctatgcggcttcatttgcaggatatg 952 ||||||||||||||||||| | ||| || || |||||||| ||||| |||||||| |||| Sbjct: 1160 gtagcccatcagctgaggtttcaccaactgtgcgctatgctgcttcgtttgcagggtatg 1219
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 283 bits (143), Expect = 1e-72 Identities = 329/391 (84%) Strand = Plus / Minus Query: 1047 cagatcttatgatgcaaaagtggcctttcttgagaatgagaactctctttcacttgctgc 1106 |||||||||||| ||||||||||| |||||||| |||| ||| ||| ||||||| | || Sbjct: 26524189 cagatcttatgaggcaaaagtggcttttcttgaaaatggaaacactcattcacttacagc 26524130 Query: 1107 atcagcagagaatgttgcagatgaagtacaaccactacaatcacgtagaaaaagacctcg 1166 ||| ||||||||| |||| ||| ||| ||| |||| |||| | | ||| |||| ||| Sbjct: 26524129 atcggcagagaataatgcaaatggagtccaaacactgcaataccatcaaaatagacatcg 26524070 Query: 1167 taaaacaatttgccgagcaaattgttctgtatgcaaagaaaattcaatgcccgaacaaaa 1226 ||||| || |||||| ||||||||| ||||||||| || ||||| | ||||| || Sbjct: 26524069 gaaaaccatctgccgaacaaattgtttaatatgcaaaggaacttcaacatctgaacagaa 26524010 Query: 1227 ttcagaagatgagattccaaacagctcccaaactatttatgacaacccaaaatgggtctg 1286 |||||||||||| | |||| |||| ||| ||| || ||| | ||||||||||||||| Sbjct: 26524009 ttcagaagatgaaaatccagacagttccagaacagcttgtgagaccccaaaatgggtctg 26523950 Query: 1287 gtccgaggggcgttttctcagtgtcggtgcagctgtcatttcatgtcgcaatgaaagagc 1346 |||| |||| |||||||||||||| ||||||||||||||||||||||| || |||||||| Sbjct: 26523949 gtccaagggtcgttttctcagtgttggtgcagctgtcatttcatgtcgtaacgaaagagc 26523890 Query: 1347 ccctgatggcctagtggctgaagcacacctctcagatggttttcttcatcttctgctcat 1406 ||||||||| ||||| ||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 26523889 ccctgatggtctagtagctgacgcacacctatctgatggttttcttcatcttctgctcat 26523830 Query: 1407 tagagattgccctcttccgttatacttatgg 1437 |||||||||||||||||| || ||||||||| Sbjct: 26523829 tagagattgccctcttcccttttacttatgg 26523799 Score = 155 bits (78), Expect = 8e-34 Identities = 135/154 (87%) Strand = Plus / Minus Query: 799 acaactggggaacgagatgctgtgacttctgccctgctaattatccttggtagaaggatg 858 ||||||||||| |||||| ||||||||||||| ||||| |||||||| || |||||||| Sbjct: 26525131 acaactggggagcgagatcctgtgacttctgctctgcttattatcctcggcagaaggata 26525072 Query: 859 tcgcttgatatagctcaagtagtcaggtggaagagtagcccatcagctgaggtcttacct 918 || ||||||||||||||||| ||||| ||||| |||||||||||||||||||| | ||| Sbjct: 26525071 tcacttgatatagctcaagttgtcagatggaaaagtagcccatcagctgaggtttcacca 26525012 Query: 919 accgtacgctatgcggcttcatttgcaggatatg 952 || || |||||||| ||||| |||||||| |||| Sbjct: 26525011 actgtgcgctatgctgcttcgtttgcagggtatg 26524978 Score = 121 bits (61), Expect = 1e-23 Identities = 79/85 (92%) Strand = Plus / Minus Query: 713 atcaagtgcccttagtctccttcccaaatgattggtttaggcttggcataattccttctg 772 |||| ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 26525636 atcaggtgcctttagtctccttcccaaataattggtttaggcttggaataattccttctg 26525577 Query: 773 gctcaacagatgctattgtactcag 797 ||||||| ||||||||||| ||||| Sbjct: 26525576 gctcaacggatgctattgttctcag 26525552 Score = 109 bits (55), Expect = 4e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 569 aggtgataatcaccgagggagcaggacatgcatatgacaccttagcatcaatatcagata 628 |||||||| |||| || ||||||||||||||||||| || |||||||| ||||||||| Sbjct: 26526753 aggtgatagtcacacagcgagcaggacatgcatatgatactttagcatctttatcagata 26526694 Query: 629 aagagctcaagaaatttgatggtgttgttgcagtg 663 |||| ||||||||||||||||||||| |||||||| Sbjct: 26526693 aagatctcaagaaatttgatggtgttattgcagtg 26526659 Score = 101 bits (51), Expect = 1e-17 Identities = 90/103 (87%) Strand = Plus / Minus Query: 947 gatatggattttatggagaagtcataagggagagtgaaaactaccgatggatggggcccg 1006 |||||||||||||||||||||| ||||||||||||||||| ||| | |||||||| || | Sbjct: 26524361 gatatggattttatggagaagttataagggagagtgaaaagtacaggtggatgggtcctg 26524302 Query: 1007 cacgttatgatttttctggaactatggtctttctgaagcacag 1049 | || ||||| || |||||||| ||||| ||| |||||||||| Sbjct: 26524301 cgcgatatgacttctctggaacaatggtatttttgaagcacag 26524259 Score = 99.6 bits (50), Expect = 4e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 1509 agcatttaccttcatttcatcacacaacgaaagtgtatggaacttggatggcgagctttt 1568 ||||||||| || || || ||||| |||||||||| ||||||||||| || || ||| | Sbjct: 26523179 agcatttacttttatatcgtcacatgacgaaagtgtctggaacttggacggagaacttct 26523120 Query: 1569 tcaggcctgcgaagtgtctgttcaagcttgccgcggccttgtttacctcttcgcgtcagg 1628 ||||||||| || || ||||||||||||| ||| |||||||| ||||||| |||||||| Sbjct: 26523119 tcaggcctgtgaggtatctgttcaagctttccgaggccttgtcaacctctttgcgtcagg 26523060 Query: 1629 gccagaggtgtagc 1642 || |||||||||| Sbjct: 26523059 accggaggtgtagc 26523046 Score = 95.6 bits (48), Expect = 6e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 477 ggtatttgtccatccactgtgtggaaaaggtagaggttgcaaaaattgggaaatggtagc 536 |||||||||||||||| ||||||||||||||||||| || || |||||||||| ||||| Sbjct: 26527014 ggtatttgtccatccattgtgtggaaaaggtagagggtgtaagaattgggaaacagtagc 26526955 Query: 537 tccgttatttgaccaggcgaaagtaaatacaaaggt 572 ||| |||||||| | ||| |||||||| || ||||| Sbjct: 26526954 tccattatttgagcgggcaaaagtaaaaacgaaggt 26526919 Score = 87.7 bits (44), Expect = 2e-13 Identities = 125/152 (82%) Strand = Plus / Minus Query: 158 gttcttcatgttggtcatctatcggactactaccaaaattggagaacaaaatcaagtttt 217 ||||||||||||||||||||||| | | | ||| || || |||| ||| | ||||||| Sbjct: 26527587 gttcttcatgttggtcatctatcataatgcaacctaagttagagagcaagcttaagtttt 26527528 Query: 218 tggatgtttatgctgtggagcttcttgatgaaggtcctgtatgtggaccttggaatacaa 277 ||||| |||||||| ||||||||||| | ||||||||||||| |||||||||| ||| Sbjct: 26527527 cagatgtctatgctgtagagcttcttgaggtgggtcctgtatgtgaaccttggaatgcaa 26527468 Query: 278 gaattgtcgtccaaggcaagaaaaatactgag 309 || | ||| |||||||||| |||||||||| Sbjct: 26527467 gagctaccgttcaaggcaagataaatactgag 26527436 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 66 cggcgaggtgctgttcctgggcggcgtcggagaggtcaccgtcaccctcggccacgacgg 125 |||||||| ||| ||||||| ||||||||| |||||||| || || ||||| ||||||| Sbjct: 26528476 cggcgaggcgctcttcctggacggcgtcggggaggtcacggtggccgtcggcgacgacgg 26528417 Query: 126 cctctccttcc 136 ||||||||||| Sbjct: 26528416 cctctccttcc 26528406 Score = 65.9 bits (33), Expect = 6e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 364 tgggtaccttgtgaatatctttttggacacaaagacccggagacctgcaaaagctgggct 423 |||||||||||||||||| ||||||| || ||||||| | | |||||||||| |||| Sbjct: 26527235 tgggtaccttgtgaatatatttttggtcataaagaccagcaaacctgcaaaacttgggtg 26527176 Query: 424 gagcatctcagtgcatgcataaataatgaacaggacaggccaaagaacctgatggta 480 |||||| | | | ||||||||||| |||||||| ||||| |||| ||| |||||| Sbjct: 26527175 gagcatataaagacgtgcataaataaggaacaggataggcccaagagcctcatggta 26527119 Score = 56.0 bits (28), Expect = 5e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 1436 ggcatctgacacaatttactaagaagggatcggaccccctaaccttcaactttgttgaac 1495 ||||||| ||||||||||| |||||||| || || || || | |||||| ||||| |||| Sbjct: 26523330 ggcatctaacacaatttaccaagaagggctcagatcctctgagcttcaagtttgtcgaac 26523271 Query: 1496 atcataag 1503 |||||||| Sbjct: 26523270 atcataag 26523263
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_B06 Length = 131956 Score = 283 bits (143), Expect = 1e-72 Identities = 329/391 (84%) Strand = Plus / Minus Query: 1047 cagatcttatgatgcaaaagtggcctttcttgagaatgagaactctctttcacttgctgc 1106 |||||||||||| ||||||||||| |||||||| |||| ||| ||| ||||||| | || Sbjct: 124105 cagatcttatgaggcaaaagtggcttttcttgaaaatggaaacactcattcacttacagc 124046 Query: 1107 atcagcagagaatgttgcagatgaagtacaaccactacaatcacgtagaaaaagacctcg 1166 ||| ||||||||| |||| ||| ||| ||| |||| |||| | | ||| |||| ||| Sbjct: 124045 atcggcagagaataatgcaaatggagtccaaacactgcaataccatcaaaatagacatcg 123986 Query: 1167 taaaacaatttgccgagcaaattgttctgtatgcaaagaaaattcaatgcccgaacaaaa 1226 ||||| || |||||| ||||||||| ||||||||| || ||||| | ||||| || Sbjct: 123985 gaaaaccatctgccgaacaaattgtttaatatgcaaaggaacttcaacatctgaacagaa 123926 Query: 1227 ttcagaagatgagattccaaacagctcccaaactatttatgacaacccaaaatgggtctg 1286 |||||||||||| | |||| |||| ||| ||| || ||| | ||||||||||||||| Sbjct: 123925 ttcagaagatgaaaatccagacagttccagaacagcttgtgagaccccaaaatgggtctg 123866 Query: 1287 gtccgaggggcgttttctcagtgtcggtgcagctgtcatttcatgtcgcaatgaaagagc 1346 |||| |||| |||||||||||||| ||||||||||||||||||||||| || |||||||| Sbjct: 123865 gtccaagggtcgttttctcagtgttggtgcagctgtcatttcatgtcgtaacgaaagagc 123806 Query: 1347 ccctgatggcctagtggctgaagcacacctctcagatggttttcttcatcttctgctcat 1406 ||||||||| ||||| ||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 123805 ccctgatggtctagtagctgacgcacacctatctgatggttttcttcatcttctgctcat 123746 Query: 1407 tagagattgccctcttccgttatacttatgg 1437 |||||||||||||||||| || ||||||||| Sbjct: 123745 tagagattgccctcttcccttttacttatgg 123715 Score = 155 bits (78), Expect = 8e-34 Identities = 135/154 (87%) Strand = Plus / Minus Query: 799 acaactggggaacgagatgctgtgacttctgccctgctaattatccttggtagaaggatg 858 ||||||||||| |||||| ||||||||||||| ||||| |||||||| || |||||||| Sbjct: 125047 acaactggggagcgagatcctgtgacttctgctctgcttattatcctcggcagaaggata 124988 Query: 859 tcgcttgatatagctcaagtagtcaggtggaagagtagcccatcagctgaggtcttacct 918 || ||||||||||||||||| ||||| ||||| |||||||||||||||||||| | ||| Sbjct: 124987 tcacttgatatagctcaagttgtcagatggaaaagtagcccatcagctgaggtttcacca 124928 Query: 919 accgtacgctatgcggcttcatttgcaggatatg 952 || || |||||||| ||||| |||||||| |||| Sbjct: 124927 actgtgcgctatgctgcttcgtttgcagggtatg 124894 Score = 121 bits (61), Expect = 1e-23 Identities = 79/85 (92%) Strand = Plus / Minus Query: 713 atcaagtgcccttagtctccttcccaaatgattggtttaggcttggcataattccttctg 772 |||| ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 125552 atcaggtgcctttagtctccttcccaaataattggtttaggcttggaataattccttctg 125493 Query: 773 gctcaacagatgctattgtactcag 797 ||||||| ||||||||||| ||||| Sbjct: 125492 gctcaacggatgctattgttctcag 125468 Score = 109 bits (55), Expect = 4e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 569 aggtgataatcaccgagggagcaggacatgcatatgacaccttagcatcaatatcagata 628 |||||||| |||| || ||||||||||||||||||| || |||||||| ||||||||| Sbjct: 126669 aggtgatagtcacacagcgagcaggacatgcatatgatactttagcatctttatcagata 126610 Query: 629 aagagctcaagaaatttgatggtgttgttgcagtg 663 |||| ||||||||||||||||||||| |||||||| Sbjct: 126609 aagatctcaagaaatttgatggtgttattgcagtg 126575 Score = 101 bits (51), Expect = 1e-17 Identities = 90/103 (87%) Strand = Plus / Minus Query: 947 gatatggattttatggagaagtcataagggagagtgaaaactaccgatggatggggcccg 1006 |||||||||||||||||||||| ||||||||||||||||| ||| | |||||||| || | Sbjct: 124277 gatatggattttatggagaagttataagggagagtgaaaagtacaggtggatgggtcctg 124218 Query: 1007 cacgttatgatttttctggaactatggtctttctgaagcacag 1049 | || ||||| || |||||||| ||||| ||| |||||||||| Sbjct: 124217 cgcgatatgacttctctggaacaatggtatttttgaagcacag 124175 Score = 99.6 bits (50), Expect = 4e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 1509 agcatttaccttcatttcatcacacaacgaaagtgtatggaacttggatggcgagctttt 1568 ||||||||| || || || ||||| |||||||||| ||||||||||| || || ||| | Sbjct: 123095 agcatttacttttatatcgtcacatgacgaaagtgtctggaacttggacggagaacttct 123036 Query: 1569 tcaggcctgcgaagtgtctgttcaagcttgccgcggccttgtttacctcttcgcgtcagg 1628 ||||||||| || || ||||||||||||| ||| |||||||| ||||||| |||||||| Sbjct: 123035 tcaggcctgtgaggtatctgttcaagctttccgaggccttgtcaacctctttgcgtcagg 122976 Query: 1629 gccagaggtgtagc 1642 || |||||||||| Sbjct: 122975 accggaggtgtagc 122962 Score = 95.6 bits (48), Expect = 6e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 477 ggtatttgtccatccactgtgtggaaaaggtagaggttgcaaaaattgggaaatggtagc 536 |||||||||||||||| ||||||||||||||||||| || || |||||||||| ||||| Sbjct: 126930 ggtatttgtccatccattgtgtggaaaaggtagagggtgtaagaattgggaaacagtagc 126871 Query: 537 tccgttatttgaccaggcgaaagtaaatacaaaggt 572 ||| |||||||| | ||| |||||||| || ||||| Sbjct: 126870 tccattatttgagcgggcaaaagtaaaaacgaaggt 126835 Score = 87.7 bits (44), Expect = 2e-13 Identities = 125/152 (82%) Strand = Plus / Minus Query: 158 gttcttcatgttggtcatctatcggactactaccaaaattggagaacaaaatcaagtttt 217 ||||||||||||||||||||||| | | | ||| || || |||| ||| | ||||||| Sbjct: 127503 gttcttcatgttggtcatctatcataatgcaacctaagttagagagcaagcttaagtttt 127444 Query: 218 tggatgtttatgctgtggagcttcttgatgaaggtcctgtatgtggaccttggaatacaa 277 ||||| |||||||| ||||||||||| | ||||||||||||| |||||||||| ||| Sbjct: 127443 cagatgtctatgctgtagagcttcttgaggtgggtcctgtatgtgaaccttggaatgcaa 127384 Query: 278 gaattgtcgtccaaggcaagaaaaatactgag 309 || | ||| |||||||||| |||||||||| Sbjct: 127383 gagctaccgttcaaggcaagataaatactgag 127352 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 66 cggcgaggtgctgttcctgggcggcgtcggagaggtcaccgtcaccctcggccacgacgg 125 |||||||| ||| ||||||| ||||||||| |||||||| || || ||||| ||||||| Sbjct: 128392 cggcgaggcgctcttcctggacggcgtcggggaggtcacggtggccgtcggcgacgacgg 128333 Query: 126 cctctccttcc 136 ||||||||||| Sbjct: 128332 cctctccttcc 128322 Score = 65.9 bits (33), Expect = 6e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 364 tgggtaccttgtgaatatctttttggacacaaagacccggagacctgcaaaagctgggct 423 |||||||||||||||||| ||||||| || ||||||| | | |||||||||| |||| Sbjct: 127151 tgggtaccttgtgaatatatttttggtcataaagaccagcaaacctgcaaaacttgggtg 127092 Query: 424 gagcatctcagtgcatgcataaataatgaacaggacaggccaaagaacctgatggta 480 |||||| | | | ||||||||||| |||||||| ||||| |||| ||| |||||| Sbjct: 127091 gagcatataaagacgtgcataaataaggaacaggataggcccaagagcctcatggta 127035 Score = 56.0 bits (28), Expect = 5e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 1436 ggcatctgacacaatttactaagaagggatcggaccccctaaccttcaactttgttgaac 1495 ||||||| ||||||||||| |||||||| || || || || | |||||| ||||| |||| Sbjct: 123246 ggcatctaacacaatttaccaagaagggctcagatcctctgagcttcaagtttgtcgaac 123187 Query: 1496 atcataag 1503 |||||||| Sbjct: 123186 atcataag 123179
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 283 bits (143), Expect = 1e-72 Identities = 329/391 (84%) Strand = Plus / Minus Query: 1047 cagatcttatgatgcaaaagtggcctttcttgagaatgagaactctctttcacttgctgc 1106 |||||||||||| ||||||||||| |||||||| |||| ||| ||| ||||||| | || Sbjct: 66570 cagatcttatgaggcaaaagtggcttttcttgaaaatggaaacactcattcacttacagc 66511 Query: 1107 atcagcagagaatgttgcagatgaagtacaaccactacaatcacgtagaaaaagacctcg 1166 ||| ||||||||| |||| ||| ||| ||| |||| |||| | | ||| |||| ||| Sbjct: 66510 atcggcagagaataatgcaaatggagtccaaacactgcaataccatcaaaatagacatcg 66451 Query: 1167 taaaacaatttgccgagcaaattgttctgtatgcaaagaaaattcaatgcccgaacaaaa 1226 ||||| || |||||| ||||||||| ||||||||| || ||||| | ||||| || Sbjct: 66450 gaaaaccatctgccgaacaaattgtttaatatgcaaaggaacttcaacatctgaacagaa 66391 Query: 1227 ttcagaagatgagattccaaacagctcccaaactatttatgacaacccaaaatgggtctg 1286 |||||||||||| | |||| |||| ||| ||| || ||| | ||||||||||||||| Sbjct: 66390 ttcagaagatgaaaatccagacagttccagaacagcttgtgagaccccaaaatgggtctg 66331 Query: 1287 gtccgaggggcgttttctcagtgtcggtgcagctgtcatttcatgtcgcaatgaaagagc 1346 |||| |||| |||||||||||||| ||||||||||||||||||||||| || |||||||| Sbjct: 66330 gtccaagggtcgttttctcagtgttggtgcagctgtcatttcatgtcgtaacgaaagagc 66271 Query: 1347 ccctgatggcctagtggctgaagcacacctctcagatggttttcttcatcttctgctcat 1406 ||||||||| ||||| ||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 66270 ccctgatggtctagtagctgacgcacacctatctgatggttttcttcatcttctgctcat 66211 Query: 1407 tagagattgccctcttccgttatacttatgg 1437 |||||||||||||||||| || ||||||||| Sbjct: 66210 tagagattgccctcttcccttttacttatgg 66180 Score = 155 bits (78), Expect = 8e-34 Identities = 135/154 (87%) Strand = Plus / Minus Query: 799 acaactggggaacgagatgctgtgacttctgccctgctaattatccttggtagaaggatg 858 ||||||||||| |||||| ||||||||||||| ||||| |||||||| || |||||||| Sbjct: 67512 acaactggggagcgagatcctgtgacttctgctctgcttattatcctcggcagaaggata 67453 Query: 859 tcgcttgatatagctcaagtagtcaggtggaagagtagcccatcagctgaggtcttacct 918 || ||||||||||||||||| ||||| ||||| |||||||||||||||||||| | ||| Sbjct: 67452 tcacttgatatagctcaagttgtcagatggaaaagtagcccatcagctgaggtttcacca 67393 Query: 919 accgtacgctatgcggcttcatttgcaggatatg 952 || || |||||||| ||||| |||||||| |||| Sbjct: 67392 actgtgcgctatgctgcttcgtttgcagggtatg 67359 Score = 121 bits (61), Expect = 1e-23 Identities = 79/85 (92%) Strand = Plus / Minus Query: 713 atcaagtgcccttagtctccttcccaaatgattggtttaggcttggcataattccttctg 772 |||| ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 68017 atcaggtgcctttagtctccttcccaaataattggtttaggcttggaataattccttctg 67958 Query: 773 gctcaacagatgctattgtactcag 797 ||||||| ||||||||||| ||||| Sbjct: 67957 gctcaacggatgctattgttctcag 67933 Score = 109 bits (55), Expect = 4e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 569 aggtgataatcaccgagggagcaggacatgcatatgacaccttagcatcaatatcagata 628 |||||||| |||| || ||||||||||||||||||| || |||||||| ||||||||| Sbjct: 69134 aggtgatagtcacacagcgagcaggacatgcatatgatactttagcatctttatcagata 69075 Query: 629 aagagctcaagaaatttgatggtgttgttgcagtg 663 |||| ||||||||||||||||||||| |||||||| Sbjct: 69074 aagatctcaagaaatttgatggtgttattgcagtg 69040 Score = 101 bits (51), Expect = 1e-17 Identities = 90/103 (87%) Strand = Plus / Minus Query: 947 gatatggattttatggagaagtcataagggagagtgaaaactaccgatggatggggcccg 1006 |||||||||||||||||||||| ||||||||||||||||| ||| | |||||||| || | Sbjct: 66742 gatatggattttatggagaagttataagggagagtgaaaagtacaggtggatgggtcctg 66683 Query: 1007 cacgttatgatttttctggaactatggtctttctgaagcacag 1049 | || ||||| || |||||||| ||||| ||| |||||||||| Sbjct: 66682 cgcgatatgacttctctggaacaatggtatttttgaagcacag 66640 Score = 99.6 bits (50), Expect = 4e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 1509 agcatttaccttcatttcatcacacaacgaaagtgtatggaacttggatggcgagctttt 1568 ||||||||| || || || ||||| |||||||||| ||||||||||| || || ||| | Sbjct: 65560 agcatttacttttatatcgtcacatgacgaaagtgtctggaacttggacggagaacttct 65501 Query: 1569 tcaggcctgcgaagtgtctgttcaagcttgccgcggccttgtttacctcttcgcgtcagg 1628 ||||||||| || || ||||||||||||| ||| |||||||| ||||||| |||||||| Sbjct: 65500 tcaggcctgtgaggtatctgttcaagctttccgaggccttgtcaacctctttgcgtcagg 65441 Query: 1629 gccagaggtgtagc 1642 || |||||||||| Sbjct: 65440 accggaggtgtagc 65427 Score = 95.6 bits (48), Expect = 6e-16 Identities = 84/96 (87%) Strand = Plus / Minus Query: 477 ggtatttgtccatccactgtgtggaaaaggtagaggttgcaaaaattgggaaatggtagc 536 |||||||||||||||| ||||||||||||||||||| || || |||||||||| ||||| Sbjct: 69395 ggtatttgtccatccattgtgtggaaaaggtagagggtgtaagaattgggaaacagtagc 69336 Query: 537 tccgttatttgaccaggcgaaagtaaatacaaaggt 572 ||| |||||||| | ||| |||||||| || ||||| Sbjct: 69335 tccattatttgagcgggcaaaagtaaaaacgaaggt 69300 Score = 87.7 bits (44), Expect = 2e-13 Identities = 125/152 (82%) Strand = Plus / Minus Query: 158 gttcttcatgttggtcatctatcggactactaccaaaattggagaacaaaatcaagtttt 217 ||||||||||||||||||||||| | | | ||| || || |||| ||| | ||||||| Sbjct: 69968 gttcttcatgttggtcatctatcataatgcaacctaagttagagagcaagcttaagtttt 69909 Query: 218 tggatgtttatgctgtggagcttcttgatgaaggtcctgtatgtggaccttggaatacaa 277 ||||| |||||||| ||||||||||| | ||||||||||||| |||||||||| ||| Sbjct: 69908 cagatgtctatgctgtagagcttcttgaggtgggtcctgtatgtgaaccttggaatgcaa 69849 Query: 278 gaattgtcgtccaaggcaagaaaaatactgag 309 || | ||| |||||||||| |||||||||| Sbjct: 69848 gagctaccgttcaaggcaagataaatactgag 69817 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 66 cggcgaggtgctgttcctgggcggcgtcggagaggtcaccgtcaccctcggccacgacgg 125 |||||||| ||| ||||||| ||||||||| |||||||| || || ||||| ||||||| Sbjct: 70857 cggcgaggcgctcttcctggacggcgtcggggaggtcacggtggccgtcggcgacgacgg 70798 Query: 126 cctctccttcc 136 ||||||||||| Sbjct: 70797 cctctccttcc 70787 Score = 65.9 bits (33), Expect = 6e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 364 tgggtaccttgtgaatatctttttggacacaaagacccggagacctgcaaaagctgggct 423 |||||||||||||||||| ||||||| || ||||||| | | |||||||||| |||| Sbjct: 69616 tgggtaccttgtgaatatatttttggtcataaagaccagcaaacctgcaaaacttgggtg 69557 Query: 424 gagcatctcagtgcatgcataaataatgaacaggacaggccaaagaacctgatggta 480 |||||| | | | ||||||||||| |||||||| ||||| |||| ||| |||||| Sbjct: 69556 gagcatataaagacgtgcataaataaggaacaggataggcccaagagcctcatggta 69500 Score = 56.0 bits (28), Expect = 5e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 1436 ggcatctgacacaatttactaagaagggatcggaccccctaaccttcaactttgttgaac 1495 ||||||| ||||||||||| |||||||| || || || || | |||||| ||||| |||| Sbjct: 65711 ggcatctaacacaatttaccaagaagggctcagatcctctgagcttcaagtttgtcgaac 65652 Query: 1496 atcataag 1503 |||||||| Sbjct: 65651 atcataag 65644
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 276 bits (139), Expect = 3e-70 Identities = 328/391 (83%) Strand = Plus / Minus Query: 1047 cagatcttatgatgcaaaagtggcctttcttgagaatgagaactctctttcacttgctgc 1106 |||||||||||| ||||||||||| |||||||| |||| ||| ||| ||||||| | || Sbjct: 229847 cagatcttatgaggcaaaagtggcttttcttgaaaatggaaacactcattcacttacagc 229788 Query: 1107 atcagcagagaatgttgcagatgaagtacaaccactacaatcacgtagaaaaagacctcg 1166 ||| ||||||||| |||| ||| ||| ||| |||| |||| | | ||| |||| ||| Sbjct: 229787 atcggcagagaataatgcaaatggagtccaaacactgcaataccatcaaaatagacatcg 229728 Query: 1167 taaaacaatttgccgagcaaattgttctgtatgcaaagaaaattcaatgcccgaacaaaa 1226 ||||| || |||||| ||||||||| ||||||||| || || || | ||||| || Sbjct: 229727 gaaaaccatctgccgaacaaattgtttaatatgcaaaggaactttaacatctgaacagaa 229668 Query: 1227 ttcagaagatgagattccaaacagctcccaaactatttatgacaacccaaaatgggtctg 1286 |||||||||||| | |||| |||| ||| ||| || ||| | ||||||||||||||| Sbjct: 229667 ttcagaagatgaaaatccagacagttccagaacagcttgtgagaccccaaaatgggtctg 229608 Query: 1287 gtccgaggggcgttttctcagtgtcggtgcagctgtcatttcatgtcgcaatgaaagagc 1346 |||| |||| |||||||||||||| ||||||||||||||||||||||| || |||||||| Sbjct: 229607 gtccaagggtcgttttctcagtgttggtgcagctgtcatttcatgtcgtaacgaaagagc 229548 Query: 1347 ccctgatggcctagtggctgaagcacacctctcagatggttttcttcatcttctgctcat 1406 ||||||||| ||||| ||||| |||||||| || |||||||||||||||||||||||||| Sbjct: 229547 ccctgatggtctagtagctgacgcacacctatctgatggttttcttcatcttctgctcat 229488 Query: 1407 tagagattgccctcttccgttatacttatgg 1437 |||||||||||||||||| || ||||||||| Sbjct: 229487 tagagattgccctcttcccttttacttatgg 229457 Score = 155 bits (78), Expect = 8e-34 Identities = 135/154 (87%) Strand = Plus / Minus Query: 799 acaactggggaacgagatgctgtgacttctgccctgctaattatccttggtagaaggatg 858 ||||||||||| |||||| ||||||||||||| ||||| |||||||| || |||||||| Sbjct: 230789 acaactggggagcgagatcctgtgacttctgctctgcttattatcctcggcagaaggata 230730 Query: 859 tcgcttgatatagctcaagtagtcaggtggaagagtagcccatcagctgaggtcttacct 918 || ||||||||||||||||| ||||| ||||| |||||||||||||||||||| | ||| Sbjct: 230729 tcacttgatatagctcaagttgtcagatggaaaagtagcccatcagctgaggtttcacca 230670 Query: 919 accgtacgctatgcggcttcatttgcaggatatg 952 || || |||||||| ||||| |||||||| |||| Sbjct: 230669 actgtgcgctatgctgcttcgtttgcagggtatg 230636 Score = 121 bits (61), Expect = 1e-23 Identities = 79/85 (92%) Strand = Plus / Minus Query: 713 atcaagtgcccttagtctccttcccaaatgattggtttaggcttggcataattccttctg 772 |||| ||||| |||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 231284 atcaggtgcctttagtctccttcccaaataattggtttaggcttggaataattccttctg 231225 Query: 773 gctcaacagatgctattgtactcag 797 ||||||| ||||||||||| ||||| Sbjct: 231224 gctcaacggatgctattgttctcag 231200 Score = 109 bits (55), Expect = 4e-20 Identities = 85/95 (89%) Strand = Plus / Minus Query: 569 aggtgataatcaccgagggagcaggacatgcatatgacaccttagcatcaatatcagata 628 |||||||| |||| || ||||||||||||||||||| || |||||||| ||||||||| Sbjct: 232401 aggtgatagtcacacagcgagcaggacatgcatatgatactttagcatctttatcagata 232342 Query: 629 aagagctcaagaaatttgatggtgttgttgcagtg 663 |||| ||||||||||||||||||||| |||||||| Sbjct: 232341 aagatctcaagaaatttgatggtgttattgcagtg 232307 Score = 99.6 bits (50), Expect = 4e-17 Identities = 113/134 (84%) Strand = Plus / Minus Query: 1509 agcatttaccttcatttcatcacacaacgaaagtgtatggaacttggatggcgagctttt 1568 ||||||||| || || || ||||| |||||||||| ||||||||||| || || ||| | Sbjct: 228837 agcatttacttttatatcgtcacatgacgaaagtgtctggaacttggacggagaacttct 228778 Query: 1569 tcaggcctgcgaagtgtctgttcaagcttgccgcggccttgtttacctcttcgcgtcagg 1628 ||||||||| || || ||||||||||||| ||| |||||||| ||||||| |||||||| Sbjct: 228777 tcaggcctgtgaggtatctgttcaagctttccgaggccttgtcaacctctttgcgtcagg 228718 Query: 1629 gccagaggtgtagc 1642 || |||||||||| Sbjct: 228717 accggaggtgtagc 228704 Score = 93.7 bits (47), Expect = 2e-15 Identities = 89/103 (86%) Strand = Plus / Minus Query: 947 gatatggattttatggagaagtcataagggagagtgaaaactaccgatggatggggcccg 1006 |||||||||||||||||||||| ||||||||||||||||| ||| | |||||||| || | Sbjct: 230019 gatatggattttatggagaagttataagggagagtgaaaagtacaggtggatgggtcctg 229960 Query: 1007 cacgttatgatttttctggaactatggtctttctgaagcacag 1049 | | ||||| || |||||||| ||||| ||| |||||||||| Sbjct: 229959 cgagatatgacttctctggaacaatggtatttttgaagcacag 229917 Score = 87.7 bits (44), Expect = 2e-13 Identities = 83/96 (86%) Strand = Plus / Minus Query: 477 ggtatttgtccatccactgtgtggaaaaggtagaggttgcaaaaattgggaaatggtagc 536 |||||||||||||||| | ||||||||||||||||| || || |||||||||| ||||| Sbjct: 232662 ggtatttgtccatccattatgtggaaaaggtagagggtgtaagaattgggaaacagtagc 232603 Query: 537 tccgttatttgaccaggcgaaagtaaatacaaaggt 572 ||| |||||||| | ||| |||||||| || ||||| Sbjct: 232602 tccattatttgagcgggcaaaagtaaaaacgaaggt 232567 Score = 87.7 bits (44), Expect = 2e-13 Identities = 125/152 (82%) Strand = Plus / Minus Query: 158 gttcttcatgttggtcatctatcggactactaccaaaattggagaacaaaatcaagtttt 217 ||||||||||||||||||||||| | | | ||| || || |||| ||| | ||||||| Sbjct: 233235 gttcttcatgttggtcatctatcataatgcaacctaagttagagagcaagcttaagtttt 233176 Query: 218 tggatgtttatgctgtggagcttcttgatgaaggtcctgtatgtggaccttggaatacaa 277 ||||| |||||||| ||||||||||| | ||||||||||||| |||||||||| ||| Sbjct: 233175 cagatgtctatgctgtagagcttcttgaggtgggtcctgtatgtgaaccttggaatgcaa 233116 Query: 278 gaattgtcgtccaaggcaagaaaaatactgag 309 || | ||| |||||||||| |||||||||| Sbjct: 233115 gagctaccgttcaaggcaagataaatactgag 233084 Score = 69.9 bits (35), Expect = 4e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 66 cggcgaggtgctgttcctgggcggcgtcggagaggtcaccgtcaccctcggccacgacgg 125 |||||||| ||| ||||||| ||||||||| |||||||| || || ||||| ||||||| Sbjct: 234123 cggcgaggcgctcttcctggacggcgtcggggaggtcacggtggccgtcggcgacgacgg 234064 Query: 126 cctctccttcc 136 ||||||||||| Sbjct: 234063 cctctccttcc 234053 Score = 65.9 bits (33), Expect = 6e-07 Identities = 96/117 (82%) Strand = Plus / Minus Query: 364 tgggtaccttgtgaatatctttttggacacaaagacccggagacctgcaaaagctgggct 423 |||||||||||||||||| ||||||| || ||||||| | | |||||||||| |||| Sbjct: 232883 tgggtaccttgtgaatatatttttggtcataaagaccagcaaacctgcaaaacttgggtg 232824 Query: 424 gagcatctcagtgcatgcataaataatgaacaggacaggccaaagaacctgatggta 480 |||||| | | | ||||||||||| |||||||| ||||| |||| ||| |||||| Sbjct: 232823 gagcatataaagacgtgcataaataaggaacaggataggcccaagagcctcatggta 232767 Score = 56.0 bits (28), Expect = 5e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 1436 ggcatctgacacaatttactaagaagggatcggaccccctaaccttcaactttgttgaac 1495 ||||||| ||||||||||| |||||||| || || || || | |||||| ||||| |||| Sbjct: 228988 ggcatctaacacaatttaccaagaagggctcagatcctctgagcttcaagtttgtcgaac 228929 Query: 1496 atcataag 1503 |||||||| Sbjct: 228928 atcataag 228921
>gb|DQ207689.1| Zea mays cultivar inbred line Mo17 IDP325 marker Length = 759 Score = 89.7 bits (45), Expect = 4e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 1344 agcccctgatggcctagtggctgaagcacacctctcagatggttttcttcatcttctgct 1403 ||||||||||||||| || ||||| |||||||| || ||||||||||||||||| |||| Sbjct: 1 agcccctgatggcctggtagctgacgcacacctttcggatggttttcttcatctcttgct 60 Query: 1404 cattagagattgccctcttcc 1424 ||| ||||| ||||||||||| Sbjct: 61 cataagagactgccctcttcc 81 Score = 61.9 bits (31), Expect = 9e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 1513 tttaccttcatttcatcacacaacgaaagtgtatggaacttggatggcgagctttttcag 1572 |||||||| || |||||||| |||||||||| |||||||||||||| ||| | |||||| Sbjct: 674 tttacctttatctcatcacatgacgaaagtgtttggaacttggatggagagatgtttcag 733 Query: 1573 gcctgcgaagtgtctgttcaagc 1595 || || || || ||||| ||||| Sbjct: 734 gcatgtgaggtatctgtccaagc 756 Score = 48.1 bits (24), Expect = 0.13 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1436 ggcatctgacacaatttactaagaagggatcggaccccctaaccttcaactttgttgaac 1495 ||||||| ||||||||||| |||||||| || || ||||| ||||||| || ||||| | Sbjct: 530 ggcatctaacacaatttaccaagaagggttcagatcccctgtccttcaagttcgttgagc 589 Query: 1496 atca 1499 |||| Sbjct: 590 atca 593
>ref|NM_001031340.1| Gallus gallus ceramide kinase (CERK), mRNA emb|AJ851677.1| Gallus gallus mRNA for hypothetical protein, clone 16p10 Length = 4405 Score = 50.1 bits (25), Expect = 0.033 Identities = 28/29 (96%) Strand = Plus / Plus Query: 755 ttggcataattccttctggctcaacagat 783 |||||||||||||| |||||||||||||| Sbjct: 829 ttggcataattcctgctggctcaacagat 857
>emb|CR386590.1| Gallus gallus finished cDNA, clone ChEST291d19 Length = 1450 Score = 50.1 bits (25), Expect = 0.033 Identities = 28/29 (96%) Strand = Plus / Plus Query: 755 ttggcataattccttctggctcaacagat 783 |||||||||||||| |||||||||||||| Sbjct: 493 ttggcataattcctgctggctcaacagat 521
>gb|DQ207688.1| Zea mays cultivar B73 IDP325 marker Length = 590 Score = 48.1 bits (24), Expect = 0.13 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1436 ggcatctgacacaatttactaagaagggatcggaccccctaaccttcaactttgttgaac 1495 ||||||| ||||||||||| |||||||| || || ||||| ||||||| || ||||| | Sbjct: 433 ggcatctaacacaatttaccaagaagggttcagatcccctgtccttcaagttcgttgagc 492 Query: 1496 atca 1499 |||| Sbjct: 493 atca 496
>emb|CT009742.12| Mouse DNA sequence from clone RP23-306D19 on chromosome 12, complete sequence Length = 163039 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Minus Query: 610 ttagcatcaatatcagataaagagctc 636 ||||||||| ||||||||||||||||| Sbjct: 84518 ttagcatcattatcagataaagagctc 84492
>gb|AC159808.2| Mus musculus BAC clone RP24-357G23 from chromosome 12, complete sequence Length = 155139 Score = 46.1 bits (23), Expect = 0.52 Identities = 26/27 (96%) Strand = Plus / Minus Query: 610 ttagcatcaatatcagataaagagctc 636 ||||||||| ||||||||||||||||| Sbjct: 129309 ttagcatcattatcagataaagagctc 129283
>emb|CT009588.1| Triticum turgidum Length = 136372 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1974 cggcaggtgctttgccttttcattaa 1999 ||||||| |||||||||||||||||| Sbjct: 103964 cggcaggagctttgccttttcattaa 103939
>emb|CT009585.1| Triticum aestivum Length = 103189 Score = 44.1 bits (22), Expect = 2.1 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1974 cggcaggtgctttgccttttcattaa 1999 ||||||| |||||||||||||||||| Sbjct: 70272 cggcaggagctttgccttttcattaa 70247
>ref|NM_124508.2| Arabidopsis thaliana diacylglycerol kinase (AT5G51290) mRNA, complete cds Length = 2255 Score = 44.1 bits (22), Expect = 2.1 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1336 aatgaaagagcccctgatggcctagtggctgaagcacacctctcagatggttttcttcat 1395 ||||||||||| |||||||| || || | || ||||||||||| || ||||| |||||| Sbjct: 1698 aatgaaagagcacctgatgggcttgttgtggatgcacacctctccgacggtttccttcat 1757 Query: 1396 ct 1397 || Sbjct: 1758 ct 1759
>gb|AY362552.1| Arabidopsis thaliana ceramide kinase (CERK) mRNA, CERK-acd5 allele, complete cds Length = 2257 Score = 44.1 bits (22), Expect = 2.1 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1336 aatgaaagagcccctgatggcctagtggctgaagcacacctctcagatggttttcttcat 1395 ||||||||||| |||||||| || || | || ||||||||||| || ||||| |||||| Sbjct: 1698 aatgaaagagcacctgatgggcttgttgtggatgcacacctctccgacggtttccttcat 1757 Query: 1396 ct 1397 || Sbjct: 1758 ct 1759
>gb|AY035126.1| Arabidopsis thaliana At5g51290 mRNA sequence Length = 2263 Score = 44.1 bits (22), Expect = 2.1 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1336 aatgaaagagcccctgatggcctagtggctgaagcacacctctcagatggttttcttcat 1395 ||||||||||| |||||||| || || | || ||||||||||| || ||||| |||||| Sbjct: 1690 aatgaaagagcacctgatgggcttgttgtggatgcacacctctccgacggtttccttcat 1749 Query: 1396 ct 1397 || Sbjct: 1750 ct 1751
>ref|NM_067150.1| Caenorhabditis elegans Nuclear Pore complex Protein family member (npp-16) (npp-16) mRNA, complete cds Length = 1494 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1011 ttatgatttttctggaactatg 1032 |||||||||||||||||||||| Sbjct: 129 ttatgatttttctggaactatg 150
>ref|NM_067149.2| Caenorhabditis elegans Nuclear Pore complex Protein family member (npp-16) (npp-16) mRNA, complete cds Length = 1674 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1011 ttatgatttttctggaactatg 1032 |||||||||||||||||||||| Sbjct: 173 ttatgatttttctggaactatg 194
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Plus Query: 225 ttatgctgtggagcttcttgat 246 |||||||||||||||||||||| Sbjct: 1058038 ttatgctgtggagcttcttgat 1058059
>dbj|AB023044.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWD22 Length = 87180 Score = 44.1 bits (22), Expect = 2.1 Identities = 52/62 (83%) Strand = Plus / Minus Query: 1336 aatgaaagagcccctgatggcctagtggctgaagcacacctctcagatggttttcttcat 1395 ||||||||||| |||||||| || || | || ||||||||||| || ||||| |||||| Sbjct: 78468 aatgaaagagcacctgatgggcttgttgtggatgcacacctctccgacggtttccttcat 78409 Query: 1396 ct 1397 || Sbjct: 78408 ct 78407
>emb|BX832161.1|CNS0A28K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH55ZF07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2279 Score = 44.1 bits (22), Expect = 2.1 Identities = 52/62 (83%) Strand = Plus / Plus Query: 1336 aatgaaagagcccctgatggcctagtggctgaagcacacctctcagatggttttcttcat 1395 ||||||||||| |||||||| || || | || ||||||||||| || ||||| |||||| Sbjct: 1758 aatgaaagagcacctgatgggcttgttgtggatgcacacctctccgacggtttccttcat 1817 Query: 1396 ct 1397 || Sbjct: 1818 ct 1819 Score = 42.1 bits (21), Expect = 8.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 553 gcgaaagtaaatacaaaggtgataatcaccgagggagcaggacatgcat 601 |||||||| |||||||||||||| | || || ||||||||||||||| Sbjct: 730 gcgaaagttaatacaaaggtgattttgacagaacgagcaggacatgcat 778
>ref|NM_211243.1| Eremothecium gossypii AFR341Cp (AFR341C), mRNA Length = 2787 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 225 ttatgctgtggagcttcttgat 246 |||||||||||||||||||||| Sbjct: 146 ttatgctgtggagcttcttgat 125
>emb|AL732463.7| Mouse DNA sequence from clone RP23-216N18 on chromosome X, complete sequence Length = 158239 Score = 44.1 bits (22), Expect = 2.1 Identities = 22/22 (100%) Strand = Plus / Minus Query: 963 agaagtcataagggagagtgaa 984 |||||||||||||||||||||| Sbjct: 108571 agaagtcataagggagagtgaa 108550
>gb|AC189018.3| Gallus gallus BAC clone CH261-138K4 from chromosome z, complete sequence Length = 218136 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 aaataatgaacaggacaggcc 464 ||||||||||||||||||||| Sbjct: 29650 aaataatgaacaggacaggcc 29630
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cggcgaggtgctgttcctggg 86 ||||||||||||||||||||| Sbjct: 3215535 cggcgaggtgctgttcctggg 3215555
>emb|CR848789.11| Zebrafish DNA sequence from clone DKEYP-114B4 in linkage group 16, complete sequence Length = 195410 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 514 tgcaaaaattgggaaatggta 534 ||||||||||||||||||||| Sbjct: 160241 tgcaaaaattgggaaatggta 160261
>gb|AC133608.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0085G12, complete sequence Length = 121470 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1800 ccaaggaaggaagagctacag 1820 ||||||||||||||||||||| Sbjct: 55316 ccaaggaaggaagagctacag 55336
>ref|XM_451822.1| Kluyveromyces lactis NRRL Y-1140, KLLA0B06457g predicted mRNA Length = 3141 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1480 ttcaactttgttgaacatcat 1500 ||||||||||||||||||||| Sbjct: 2146 ttcaactttgttgaacatcat 2166
>gb|AC012645.7| Homo sapiens chromosome 16 clone RP11-455F5, complete sequence Length = 192943 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1680 caaagggaagacaccagcata 1700 ||||||||||||||||||||| Sbjct: 67123 caaagggaagacaccagcata 67103
>gb|AC087293.5| Homo sapiens chromosome 11, clone RP11-657D12, complete sequence Length = 154644 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1990 ttttcattaaagattaggaatatac 2014 ||||||||||||||||||| ||||| Sbjct: 124560 ttttcattaaagattaggattatac 124584
>gb|AC091051.6| Homo sapiens chromosome 11, clone RP11-423H12, complete sequence Length = 177363 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1990 ttttcattaaagattaggaatatac 2014 ||||||||||||||||||| ||||| Sbjct: 177235 ttttcattaaagattaggattatac 177211
>gb|AC116362.3| Homo sapiens chromosome 5 clone RP11-756H20, complete sequence Length = 178530 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1998 aaagattaggaatatacaaaa 2018 ||||||||||||||||||||| Sbjct: 25012 aaagattaggaatatacaaaa 25032
>gb|AF334829.1| Homo sapiens mitochondrial RNA-processing endoribonuclease RNA (RMRP) gene, complete sequence Length = 187856 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggcctctccttcctccctctc 144 ||||||||||||||||||||| Sbjct: 79515 ggcctctccttcctccctctc 79535
>gb|AC107421.6| Homo sapiens 3 BAC RP11-8J23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160396 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 tctccttcctccctctccacc 148 ||||||||||||||||||||| Sbjct: 12193 tctccttcctccctctccacc 12173
>gb|AC084727.14| Homo sapiens chromosome 10 clone RP11-507P23, complete sequence Length = 188652 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1222 caaaattcagaagatgagatt 1242 ||||||||||||||||||||| Sbjct: 168902 caaaattcagaagatgagatt 168882
>gb|AC100769.2| Homo sapiens chromosome 11, clone RP11-701P23, complete sequence Length = 171700 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1990 ttttcattaaagattaggaatatac 2014 ||||||||||||||||||| ||||| Sbjct: 2095 ttttcattaaagattaggattatac 2071
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1800 ccaaggaaggaagagctacag 1820 ||||||||||||||||||||| Sbjct: 16987469 ccaaggaaggaagagctacag 16987489
>ref|XM_686828.1| PREDICTED: Danio rerio similar to solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8 (LOC563467), mRNA Length = 1977 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 agaagagaggggagaccatgcaggc 62 |||||||||||| |||||||||||| Sbjct: 1892 agaagagaggggtgaccatgcaggc 1916
>emb|AL034419.22|HS1108D11 Human DNA sequence from clone RP5-1108D11 on chromosome 20q12-13.11 Contains the 3' end of the JPH2 gene for junctophilin 2 (JP2, JP-2), the 3' end of the C20orf100 gene for a novel HMG (high mobility group) box protein similar to KIAA0737, KIAA0808 and TNRC9 (CAGF9) and two CpG islands, complete sequence Length = 152209 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 tctccttcctccctctccacc 148 ||||||||||||||||||||| Sbjct: 140694 tctccttcctccctctccacc 140714
>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1320834 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1480 ttcaactttgttgaacatcat 1500 ||||||||||||||||||||| Sbjct: 571928 ttcaactttgttgaacatcat 571908
>emb|CR378679.1| Photobacterium profundum SS9 chromosome 2; segment 5/7 Length = 349464 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1829 aaaagaaccgatgaatttcat 1849 ||||||||||||||||||||| Sbjct: 22068 aaaagaaccgatgaatttcat 22048
>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome Length = 1581384 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1212 aatgcccgaacaaaattcaga 1232 ||||||||||||||||||||| Sbjct: 998871 aatgcccgaacaaaattcaga 998851
>gb|AC021082.4|AC021082 Homo sapiens chromosome 5 clone CTC-431D1, complete sequence Length = 118645 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1998 aaagattaggaatatacaaaa 2018 ||||||||||||||||||||| Sbjct: 8668 aaagattaggaatatacaaaa 8648
>gb|AC155655.8| Mus musculus 6 BAC RP24-66L18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 203618 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 ctccttcctccctctccaccc 149 ||||||||||||||||||||| Sbjct: 47497 ctccttcctccctctccaccc 47477
>gb|AC153377.5| Mus musculus 6 BAC RP23-380O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195618 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 ctccttcctccctctccaccc 149 ||||||||||||||||||||| Sbjct: 187956 ctccttcctccctctccaccc 187936
>gb|AC134312.3| Homo sapiens chromosome 16 clone RP11-863P13, complete sequence Length = 205610 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 agctcaacaacggcaacagaa 41 ||||||||||||||||||||| Sbjct: 59202 agctcaacaacggcaacagaa 59182
>gb|AC004846.2|AC004846 Homo sapiens PAC clone RP4-647C14 from 14q24.3, complete sequence Length = 154616 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 580 accgagggagcaggacatgca 600 ||||||||||||||||||||| Sbjct: 120600 accgagggagcaggacatgca 120580
>gb|AC127455.4| Homo sapiens chromosome 16 clone CTD-3057O21, complete sequence Length = 184641 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 agctcaacaacggcaacagaa 41 ||||||||||||||||||||| Sbjct: 37580 agctcaacaacggcaacagaa 37600
>gb|AC124804.10| Homo sapiens chromosome 17, clone RP11-449L23, complete sequence Length = 203066 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1074 tcttgagaatgagaactctct 1094 ||||||||||||||||||||| Sbjct: 40829 tcttgagaatgagaactctct 40809
>gb|AF178081.1|AF178081S1 Homo sapiens talin (TLN) gene, exons 2 through 48 Length = 25906 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 124 ggcctctccttcctccctctc 144 ||||||||||||||||||||| Sbjct: 17414 ggcctctccttcctccctctc 17434
>gb|DQ193000.1| Homo sapiens 256_31 foamy virus integration site genomic sequence Length = 101 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1680 caaagggaagacaccagcata 1700 ||||||||||||||||||||| Sbjct: 8 caaagggaagacaccagcata 28
>emb|AL133410.32| Human DNA sequence from clone RP11-112J3 on chromosome 9p13.1-13.3 Contains the 3' end of the CA9 gene for carbonic anhydrase IX (MN), the TPM2 gene for tropomyosin 2 (beta) (DA1, TMSB, AMCD1), the TLN1 gene for talin 1 (TLN, KIAA1027), the CREB3 gene for cAMP responsive element binding protein 3 (luman) (LZIP, LUMAN, MGC15333, MGC19782), the GBA2 gene for glucosidase, beta (bile acid) 2 (AD035, KIAA1605, MGC16895, DKFZp762K054), a novel gene (KIAA0258), five novel genes, the NPR2 gene for natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B) (NPRB, ANPRB, GUC2B, NPRBi), the SPAG8 gene for sperm associated antigen 8 (SMP1, BS-84, HSD-1, hSMP-1, MGC26201), the HINT2 gene for Histidine triad nucleotide binding protein 2, the gene for NAG-5 protein (LOC51754), an olfactory receptor pseudogene, the gene for a novel seven transmembrane helix receptor, a NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5,13kDa (B13, NUFM, UQOR13, FLJ12147, CI-13KD-B) (NDUFA5) pseudogene and six CpG islands, complete sequence Length = 195379 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 ggcctctccttcctccctctc 144 ||||||||||||||||||||| Sbjct: 31837 ggcctctccttcctccctctc 31817
>emb|BX005289.15| Zebrafish DNA sequence from clone DKEY-68I6 in linkage group 18, complete sequence Length = 155905 Score = 42.1 bits (21), Expect = 8.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 agaagagaggggagaccatgcaggc 62 |||||||||||| |||||||||||| Sbjct: 131239 agaagagaggggtgaccatgcaggc 131215
>emb|AL928807.3| Mouse DNA sequence from clone RP23-97D20 on chromosome 2, complete sequence Length = 99202 Score = 42.1 bits (21), Expect = 8.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 ctccttcctccctctccaccc 149 ||||||||||||||||||||| Sbjct: 95935 ctccttcctccctctccaccc 95955 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 405,629,860 Number of extensions: 22201460 Number of successful extensions: 119048 Number of sequences better than 10.0: 55 Number of HSP's gapped: 119035 Number of HSP's successfully gapped: 116 Length of query: 2123 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2100 Effective length of database: 18,503,978,556 Effective search space: 38858354967600 Effective search space used: 38858354967600 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
