ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf49f19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK243595.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100084C06, full insert sequence Length = 1930 Score = 200 bits (101), Expect = 1e-47 Identities = 224/265 (84%) Strand = Plus / Plus Query: 283 tggtgaccatcctgagcgtcgacggcggcggcgtgagaggaatcatcccggccatcgtcc 342 |||| ||| |||||||| |||||||||||||||| ||||| ||||||||||||| | ||| Sbjct: 155 tggtcaccgtcctgagcatcgacggcggcggcgtcagagggatcatcccggccaccatcc 214 Query: 343 tcgctttccttgaaaaggagctccagaaattggacgggccggatgctaggatcgcggact 402 |||| |||||||| || |||||||| ||| |||| || ||||||||||||||||| |||| Sbjct: 215 tcgccttccttgagaaagagctccaaaaactggatggtccggatgctaggatcgctgact 274 Query: 403 acttcgatgtcgtcgccggcacgagcaccgggggcctcttgacggtgatgctcacggcgc 462 ||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||| || | Sbjct: 275 acttcgacgtcgtcgccggcacgagcaccggtggcctcctgacggcgatgctcactgctc 334 Query: 463 cggacaaggatggccggccgctgttcgacggcaaggatctggccaagttctacatcgacg 522 | || || | |||||| ||||||| || | | || ||||||| ||||||||||| Sbjct: 335 caaacgagaacaaccggccactgttcgccgccgacgaattggccaaattctacatcgaac 394 Query: 523 agtcgcccaaaatcttcccacagaa 547 | ||||||| |||||||||||||| Sbjct: 395 actcgcccagcatcttcccacagaa 419 Score = 178 bits (90), Expect = 4e-41 Identities = 249/302 (82%) Strand = Plus / Plus Query: 603 ccaaagtacgacggcaagtacctccattcgctgctccgtcggcacctcggcgacacgaag 662 |||||||||||||||||||||||||||||||||||||| | | ||||||||||||| | Sbjct: 469 ccaaagtacgacggcaagtacctccattcgctgctccgagagaagctcggcgacacgagg 528 Query: 663 ctggacggggctctcaccagcgtggtgatcccggccttcgatatcgcccacctgcagccc 722 |||||| ||| || || | |||||| || || ||||||| ||||| ||||||| || Sbjct: 529 ctggacaaggcgctgacgaacgtggttattcccaccttcgacatcgctaacctgcaacca 588 Query: 723 atcatcttctccagcttccagttggagaaccagcccgccaagaacgcgctcctgtcggac 782 | ||||||||||| ||| ||||| || || |||| ||||| || |||||||||||| Sbjct: 589 accatcttctccaaattcgagttgaagtacaagccactgaagaatgctctcctgtcggac 648 Query: 783 atcgccatcggcacctccgccgcacccaccttcttccccgcgcactacttcgagaccaac 842 || | ||| |||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 649 atttcgatcagcacctccgccgcaccgaccttcttcccggcgcactatttcgagaccaaa 708 Query: 843 gacggcaagggcggcaccagggcctacaacctcatcgacggcggggtcgccgccaacaac 902 |||| ||| ||| || |||| | ||||||| ||||||| |||||||||||||||||| Sbjct: 709 gacgacaatggccagacgagggagttcaacctcgtcgacggtggggtcgccgccaacaac 768 Query: 903 cc 904 || Sbjct: 769 cc 770 Score = 87.7 bits (44), Expect = 1e-13 Identities = 158/196 (80%) Strand = Plus / Plus Query: 1212 agtgcgggctccatcgacgactgctccaaggccaacttggataggttggtgaagattggg 1271 ||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||||| Sbjct: 1493 agtgcgggctcgatcgacgactgctccaaggaaaacatggataacctggtgaagattggg 1552 Query: 1272 gatgagcttctcgccgagaaggtgtccggggtggacctggagaccggccggaatgtggag 1331 || |||||||| | |||| || || | || |||||||||||||||| | ||||| Sbjct: 1553 gaaatgcttctcgacaagaacgtctcacgagtagacctggagaccggccattacgtggat 1612 Query: 1332 gtgcccggtggaggcacaaacgcggaggagctcgccaagtacgcaaggcagctctccgat 1391 ||| |||| | |||||| ||| || |||| ||||||| ||||| |||||||||||| Sbjct: 1613 gtggccggcgaaggcacgaacagagatcagcttgccaagttcgcaaagcagctctccgac 1672 Query: 1392 gagcgccgccgacgcc 1407 ||||| ||||| |||| Sbjct: 1673 gagcggcgccggcgcc 1688 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1032 gccaaggacgccgccaagtggggcatcttgagctggctcgtcaagg 1077 ||||||||||| ||||||||||| ||||| | ||||||| |||||| Sbjct: 1313 gccaaggacgctgccaagtggggaatcttcaactggctcatcaagg 1358
>ref|NM_001068579.1| Oryza sativa (japonica cultivar-group) Os08g0477500 (Os08g0477500) mRNA, complete cds Length = 1218 Score = 200 bits (101), Expect = 1e-47 Identities = 224/265 (84%) Strand = Plus / Plus Query: 283 tggtgaccatcctgagcgtcgacggcggcggcgtgagaggaatcatcccggccatcgtcc 342 |||| ||| |||||||| |||||||||||||||| ||||| ||||||||||||| | ||| Sbjct: 59 tggtcaccgtcctgagcatcgacggcggcggcgtcagagggatcatcccggccaccatcc 118 Query: 343 tcgctttccttgaaaaggagctccagaaattggacgggccggatgctaggatcgcggact 402 |||| |||||||| || |||||||| ||| |||| || ||||||||||||||||| |||| Sbjct: 119 tcgccttccttgagaaagagctccaaaaactggatggtccggatgctaggatcgctgact 178 Query: 403 acttcgatgtcgtcgccggcacgagcaccgggggcctcttgacggtgatgctcacggcgc 462 ||||||| ||||||||||||||||||||||| |||||| |||||| ||||||||| || | Sbjct: 179 acttcgacgtcgtcgccggcacgagcaccggtggcctcctgacggcgatgctcactgctc 238 Query: 463 cggacaaggatggccggccgctgttcgacggcaaggatctggccaagttctacatcgacg 522 | || || | |||||| ||||||| || | | || ||||||| ||||||||||| Sbjct: 239 caaacgagaacaaccggccactgttcgccgccgacgaattggccaaattctacatcgaac 298 Query: 523 agtcgcccaaaatcttcccacagaa 547 | ||||||| |||||||||||||| Sbjct: 299 actcgcccagcatcttcccacagaa 323 Score = 178 bits (90), Expect = 4e-41 Identities = 249/302 (82%) Strand = Plus / Plus Query: 603 ccaaagtacgacggcaagtacctccattcgctgctccgtcggcacctcggcgacacgaag 662 |||||||||||||||||||||||||||||||||||||| | | ||||||||||||| | Sbjct: 373 ccaaagtacgacggcaagtacctccattcgctgctccgagagaagctcggcgacacgagg 432 Query: 663 ctggacggggctctcaccagcgtggtgatcccggccttcgatatcgcccacctgcagccc 722 |||||| ||| || || | |||||| || || ||||||| ||||| ||||||| || Sbjct: 433 ctggacaaggcgctgacgaacgtggttattcccaccttcgacatcgctaacctgcaacca 492 Query: 723 atcatcttctccagcttccagttggagaaccagcccgccaagaacgcgctcctgtcggac 782 | ||||||||||| ||| ||||| || || |||| ||||| || |||||||||||| Sbjct: 493 accatcttctccaaattcgagttgaagtacaagccactgaagaatgctctcctgtcggac 552 Query: 783 atcgccatcggcacctccgccgcacccaccttcttccccgcgcactacttcgagaccaac 842 || | ||| |||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 553 atttcgatcagcacctccgccgcaccgaccttcttcccggcgcactatttcgagaccaaa 612 Query: 843 gacggcaagggcggcaccagggcctacaacctcatcgacggcggggtcgccgccaacaac 902 |||| ||| ||| || |||| | ||||||| ||||||| |||||||||||||||||| Sbjct: 613 gacgacaatggccagacgagggagttcaacctcgtcgacggtggggtcgccgccaacaac 672 Query: 903 cc 904 || Sbjct: 673 cc 674 Score = 87.7 bits (44), Expect = 1e-13 Identities = 158/196 (80%) Strand = Plus / Plus Query: 1212 agtgcgggctccatcgacgactgctccaaggccaacttggataggttggtgaagattggg 1271 ||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||||| Sbjct: 1003 agtgcgggctcgatcgacgactgctccaaggaaaacatggataacctggtgaagattggg 1062 Query: 1272 gatgagcttctcgccgagaaggtgtccggggtggacctggagaccggccggaatgtggag 1331 || |||||||| | |||| || || | || |||||||||||||||| | ||||| Sbjct: 1063 gaaatgcttctcgacaagaacgtctcacgagtagacctggagaccggccattacgtggat 1122 Query: 1332 gtgcccggtggaggcacaaacgcggaggagctcgccaagtacgcaaggcagctctccgat 1391 ||| |||| | |||||| ||| || |||| ||||||| ||||| |||||||||||| Sbjct: 1123 gtggccggcgaaggcacgaacagagatcagcttgccaagttcgcaaagcagctctccgac 1182 Query: 1392 gagcgccgccgacgcc 1407 ||||| ||||| |||| Sbjct: 1183 gagcggcgccggcgcc 1198 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Plus Query: 1032 gccaaggacgccgccaagtggggcatcttgagctggctcgtcaagg 1077 ||||||||||| ||||||||||| ||||| | ||||||| |||||| Sbjct: 823 gccaaggacgctgccaagtggggaatcttcaactggctcatcaagg 868
>emb|CT835976.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA213I16, full insert sequence Length = 1315 Score = 178 bits (90), Expect = 4e-41 Identities = 249/302 (82%) Strand = Plus / Plus Query: 603 ccaaagtacgacggcaagtacctccattcgctgctccgtcggcacctcggcgacacgaag 662 |||||||||||||||||||||||||||||||||||||| | | ||||||||||||| | Sbjct: 246 ccaaagtacgacggcaagtacctccattcgctgctccgagagaagctcggcgacacgagg 305 Query: 663 ctggacggggctctcaccagcgtggtgatcccggccttcgatatcgcccacctgcagccc 722 |||||| ||| || || | |||||| || || ||||||| ||||| ||||||| || Sbjct: 306 ctggacaaggcgctgacgaacgtggttattcccaccttcgacatcgctaacctgcaacca 365 Query: 723 atcatcttctccagcttccagttggagaaccagcccgccaagaacgcgctcctgtcggac 782 | ||||||||||| ||| ||||| || || |||| ||||| || |||||||||||| Sbjct: 366 accatcttctccaaattcgagttgaagtacaagccactgaagaatgctctcctgtcggac 425 Query: 783 atcgccatcggcacctccgccgcacccaccttcttccccgcgcactacttcgagaccaac 842 || | ||| |||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 426 atttcgatcagcacctccgccgcaccgaccttcttcccggcgcactatttcgagaccaaa 485 Query: 843 gacggcaagggcggcaccagggcctacaacctcatcgacggcggggtcgccgccaacaac 902 |||| ||| ||| || |||| | ||||||| ||||||| |||||||||||||||||| Sbjct: 486 gacgacaatggccagacgagggagttcaacctcgtcgacggtggggtcgccgccaacaac 545 Query: 903 cc 904 || Sbjct: 546 cc 547 Score = 87.7 bits (44), Expect = 1e-13 Identities = 158/196 (80%) Strand = Plus / Plus Query: 1212 agtgcgggctccatcgacgactgctccaaggccaacttggataggttggtgaagattggg 1271 ||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||||| Sbjct: 876 agtgcgggctcgatcgacgactgctccaaggaaaacatggataacctggtgaagattggg 935 Query: 1272 gatgagcttctcgccgagaaggtgtccggggtggacctggagaccggccggaatgtggag 1331 || |||||||| | |||| || || | || |||||||||||||||| | ||||| Sbjct: 936 gaaatgcttctcgacaagaacgtctcacgagtagacctggagaccggccattacgtggat 995 Query: 1332 gtgcccggtggaggcacaaacgcggaggagctcgccaagtacgcaaggcagctctccgat 1391 ||| |||| | |||||| ||| || |||| ||||||| ||||| |||||||||||| Sbjct: 996 gtggccggcgaaggcacgaacagagatcagcttgccaagttcgcaaagcagctctccgac 1055 Query: 1392 gagcgccgccgacgcc 1407 ||||| ||||| |||| Sbjct: 1056 gagcggcgccggcgcc 1071 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1032 gccaaggacgccgccaagtggggcatcttgagctggctcgtcaagg 1077 ||||||||||| ||||||||||||||||| | ||||||| |||||| Sbjct: 696 gccaaggacgctgccaagtggggcatcttcaactggctcatcaagg 741
>emb|CT835975.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA213H15, full insert sequence Length = 1315 Score = 178 bits (90), Expect = 4e-41 Identities = 249/302 (82%) Strand = Plus / Plus Query: 603 ccaaagtacgacggcaagtacctccattcgctgctccgtcggcacctcggcgacacgaag 662 |||||||||||||||||||||||||||||||||||||| | | ||||||||||||| | Sbjct: 246 ccaaagtacgacggcaagtacctccattcgctgctccgagagaagctcggcgacacgagg 305 Query: 663 ctggacggggctctcaccagcgtggtgatcccggccttcgatatcgcccacctgcagccc 722 |||||| ||| || || | |||||| || || ||||||| ||||| ||||||| || Sbjct: 306 ctggacaaggcgctgacgaacgtggttattcccaccttcgacatcgctaacctgcaacca 365 Query: 723 atcatcttctccagcttccagttggagaaccagcccgccaagaacgcgctcctgtcggac 782 | ||||||||||| ||| ||||| || || |||| ||||| || |||||||||||| Sbjct: 366 accatcttctccaaattcgagttgaagtacaagccactgaagaatgctctcctgtcggac 425 Query: 783 atcgccatcggcacctccgccgcacccaccttcttccccgcgcactacttcgagaccaac 842 || | ||| |||||||||||||||| ||||||||||| |||||||| ||||||||||| Sbjct: 426 atttcgatcagcacctccgccgcaccgaccttcttcccggcgcactatttcgagaccaaa 485 Query: 843 gacggcaagggcggcaccagggcctacaacctcatcgacggcggggtcgccgccaacaac 902 |||| ||| ||| || |||| | ||||||| ||||||| |||||||||||||||||| Sbjct: 486 gacgacaatggccagacgagggagttcaacctcgtcgacggtggggtcgccgccaacaac 545 Query: 903 cc 904 || Sbjct: 546 cc 547 Score = 87.7 bits (44), Expect = 1e-13 Identities = 158/196 (80%) Strand = Plus / Plus Query: 1212 agtgcgggctccatcgacgactgctccaaggccaacttggataggttggtgaagattggg 1271 ||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||||| Sbjct: 876 agtgcgggctcgatcgacgactgctccaaggaaaacatggataacctggtgaagattggg 935 Query: 1272 gatgagcttctcgccgagaaggtgtccggggtggacctggagaccggccggaatgtggag 1331 || |||||||| | |||| || || | || |||||||||||||||| | ||||| Sbjct: 936 gaaatgcttctcgacaagaacgtctcacgagtagacctggagaccggccattacgtggat 995 Query: 1332 gtgcccggtggaggcacaaacgcggaggagctcgccaagtacgcaaggcagctctccgat 1391 ||| |||| | |||||| ||| || |||| ||||||| ||||| |||||||||||| Sbjct: 996 gtggccggcgaaggcacgaacagagatcagcttgccaagttcgcaaagcagctctccgac 1055 Query: 1392 gagcgccgccgacgcc 1407 ||||| ||||| |||| Sbjct: 1056 gagcggcgccggcgcc 1071 Score = 60.0 bits (30), Expect = 3e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 1032 gccaaggacgccgccaagtggggcatcttgagctggctcgtcaagg 1077 ||||||||||| ||||||||||||||||| | ||||||| |||||| Sbjct: 696 gccaaggacgctgccaagtggggcatcttcaactggctcatcaagg 741
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 121 bits (61), Expect = 8e-24 Identities = 151/181 (83%) Strand = Plus / Minus Query: 367 agaaattggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacga 426 ||||| |||| || ||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 23541061 agaaactggatggtccggatgctaggatcgctgactacttcgacgtcgtcgccggcacga 23541002 Query: 427 gcaccgggggcctcttgacggtgatgctcacggcgccggacaaggatggccggccgctgt 486 ||||||| |||||| |||||| ||||||||| || || || || | |||||| |||| Sbjct: 23541001 gcaccggtggcctcctgacggcgatgctcactgctccaaacgagaacaaccggccactgt 23540942 Query: 487 tcgacggcaaggatctggccaagttctacatcgacgagtcgcccaaaatcttcccacaga 546 ||| || | | || ||||||| ||||||||||| | ||||||| ||||||||||||| Sbjct: 23540941 tcgccgccgacgaattggccaaattctacatcgaacactcgcccagcatcttcccacaga 23540882 Query: 547 a 547 | Sbjct: 23540881 a 23540881 Score = 117 bits (59), Expect = 1e-22 Identities = 122/143 (85%) Strand = Plus / Minus Query: 762 aagaacgcgctcctgtcggacatcgccatcggcacctccgccgcacccaccttcttcccc 821 ||||| || |||||||||||||| | ||| |||||||||||||||| ||||||||||| Sbjct: 23540045 aagaatgctctcctgtcggacatttcgatcagcacctccgccgcaccgaccttcttcccg 23539986 Query: 822 gcgcactacttcgagaccaacgacggcaagggcggcaccagggcctacaacctcatcgac 881 |||||||| ||||||||||| |||| ||| ||| || |||| | ||||||| ||||| Sbjct: 23539985 gcgcactatttcgagaccaaagacgacaatggccagacgagggagttcaacctcgtcgac 23539926 Query: 882 ggcggggtcgccgccaacaaccc 904 || |||||||||||||||||||| Sbjct: 23539925 ggtggggtcgccgccaacaaccc 23539903 Score = 89.7 bits (45), Expect = 3e-14 Identities = 111/133 (83%) Strand = Plus / Minus Query: 603 ccaaagtacgacggcaagtacctccattcgctgctccgtcggcacctcggcgacacgaag 662 |||||||||||||||||||||||||||||||||||||| | | ||||||||||||| | Sbjct: 23540661 ccaaagtacgacggcaagtacctccattcgctgctccgagagaagctcggcgacacgagg 23540602 Query: 663 ctggacggggctctcaccagcgtggtgatcccggccttcgatatcgcccacctgcagccc 722 |||||| ||| || || | |||||| || || ||||||| ||||| ||||||| || Sbjct: 23540601 ctggacaaggcgctgacgaacgtggttattcccaccttcgacatcgctaacctgcaacca 23540542 Query: 723 atcatcttctcca 735 | ||||||||||| Sbjct: 23540541 accatcttctcca 23540529 Score = 89.7 bits (45), Expect = 3e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 283 tggtgaccatcctgagcgtcgacggcggcggcgtgagaggaatcatcccggccatcgtcc 342 |||| ||| |||||||| |||||||||||||||| ||||| ||||||||||||| | ||| Sbjct: 23541240 tggtcaccgtcctgagcatcgacggcggcggcgtcagagggatcatcccggccaccatcc 23541181 Query: 343 tcgctttccttgaaaaggagctcca 367 |||| |||||||| || |||||||| Sbjct: 23541180 tcgccttccttgagaaagagctcca 23541156 Score = 87.7 bits (44), Expect = 1e-13 Identities = 158/196 (80%) Strand = Plus / Minus Query: 1212 agtgcgggctccatcgacgactgctccaaggccaacttggataggttggtgaagattggg 1271 ||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||||| Sbjct: 23538732 agtgcgggctcgatcgacgactgctccaaggaaaacatggataacctggtgaagattggg 23538673 Query: 1272 gatgagcttctcgccgagaaggtgtccggggtggacctggagaccggccggaatgtggag 1331 || |||||||| | |||| || || | || |||||||||||||||| | ||||| Sbjct: 23538672 gaaatgcttctcgacaagaacgtctcacgagtagacctggagaccggccattacgtggat 23538613 Query: 1332 gtgcccggtggaggcacaaacgcggaggagctcgccaagtacgcaaggcagctctccgat 1391 ||| |||| | |||||| ||| || |||| ||||||| ||||| |||||||||||| Sbjct: 23538612 gtggccggcgaaggcacgaacagagatcagcttgccaagttcgcaaagcagctctccgac 23538553 Query: 1392 gagcgccgccgacgcc 1407 ||||| ||||| |||| Sbjct: 23538552 gagcggcgccggcgcc 23538537 Score = 67.9 bits (34), Expect = 1e-07 Identities = 136/170 (80%) Strand = Plus / Plus Query: 294 ctgagcgtcgacggcggcggcgtgagaggaatcatcccggccatcgtcctcgctttcctt 353 |||||| ||||||||||||||||| | || |||||||||| | | |||| || ||||| Sbjct: 17656550 ctgagcatcgacggcggcggcgtgcgcgggatcatcccggggaccatcctggcgttcctg 17656609 Query: 354 gaaaaggagctccagaaattggacgggccggatgctaggatcgcggactacttcgatgtc 413 || || |||| ||| | |||||||||||| || ||| | |||||||||||||| ||| Sbjct: 17656610 gaggagaagctgcaggagctggacgggccggcggcgagggtggcggactacttcgacgtc 17656669 Query: 414 gtcgccggcacgagcaccgggggcctcttgacggtgatgctcacggcgcc 463 ||||||| |||||||| || || || |||||| |||||| ||||||| Sbjct: 17656670 atcgccgggacgagcacgggcgggctggtgacggccatgctcgcggcgcc 17656719 Score = 56.0 bits (28), Expect = 4e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 294 ctgagcgtcgacggcggcggcgtgagaggaatcatcccggccatcgtcctcgctttcctt 353 |||||| ||||||||||||||||| | || |||||||||| || | ||||||| ||||| Sbjct: 23487018 ctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcgcgttcctg 23486959 Query: 354 gaaaaggagctccagaaattggacgggccggatgctaggatcgcggactacttcgatgtc 413 || || | || ||| | ||||||| || || ||| || |||| |||||||||| || Sbjct: 23486958 gaggagaaactgcaggagctggacggccccgaggctcggctcgccaactacttcgacgtg 23486899 Query: 414 gtcgccggcacgagcaccgg 433 ||||||| ||||||||||| Sbjct: 23486898 atcgccgggacgagcaccgg 23486879 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Minus Query: 600 gggccaaagtacgacggcaagtacct 625 |||||||||||||||||||||||||| Sbjct: 23497327 gggccaaagtacgacggcaagtacct 23497302 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Minus Query: 1032 gccaaggacgccgccaagtggggcatcttgagctggctcgtcaagg 1077 ||||||||||| ||||||||||| ||||| | ||||||| |||||| Sbjct: 23539360 gccaaggacgctgccaagtggggaatcttcaactggctcatcaagg 23539315 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Minus Query: 390 aggatcgcggactacttcgatgtcgtcgccggcacgagcaccgg 433 |||||||| ||||||||||| || ||||||| ||||||||||| Sbjct: 23497633 aggatcgccgactacttcgacgtaatcgccgggacgagcaccgg 23497590 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ttgaaaaggagctccagaaattgga 376 ||||||||||| ||||||||||||| Sbjct: 6613585 ttgaaaaggaggtccagaaattgga 6613609 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 352 ttgaaaaggagctccagaaattgga 376 ||||||||||| ||||||||||||| Sbjct: 6843601 ttgaaaaggaggtccagaaattgga 6843577 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1257 ttggtgaagattggggatgag 1277 ||||||||||||||||||||| Sbjct: 26302394 ttggtgaagattggggatgag 26302374
>dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1666_A04 Length = 90097 Score = 121 bits (61), Expect = 8e-24 Identities = 151/181 (83%) Strand = Plus / Minus Query: 367 agaaattggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacga 426 ||||| |||| || ||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 20836 agaaactggatggtccggatgctaggatcgctgactacttcgacgtcgtcgccggcacga 20777 Query: 427 gcaccgggggcctcttgacggtgatgctcacggcgccggacaaggatggccggccgctgt 486 ||||||| |||||| |||||| ||||||||| || || || || | |||||| |||| Sbjct: 20776 gcaccggtggcctcctgacggcgatgctcactgctccaaacgagaacaaccggccactgt 20717 Query: 487 tcgacggcaaggatctggccaagttctacatcgacgagtcgcccaaaatcttcccacaga 546 ||| || | | || ||||||| ||||||||||| | ||||||| ||||||||||||| Sbjct: 20716 tcgccgccgacgaattggccaaattctacatcgaacactcgcccagcatcttcccacaga 20657 Query: 547 a 547 | Sbjct: 20656 a 20656 Score = 117 bits (59), Expect = 1e-22 Identities = 122/143 (85%) Strand = Plus / Minus Query: 762 aagaacgcgctcctgtcggacatcgccatcggcacctccgccgcacccaccttcttcccc 821 ||||| || |||||||||||||| | ||| |||||||||||||||| ||||||||||| Sbjct: 19820 aagaatgctctcctgtcggacatttcgatcagcacctccgccgcaccgaccttcttcccg 19761 Query: 822 gcgcactacttcgagaccaacgacggcaagggcggcaccagggcctacaacctcatcgac 881 |||||||| ||||||||||| |||| ||| ||| || |||| | ||||||| ||||| Sbjct: 19760 gcgcactatttcgagaccaaagacgacaatggccagacgagggagttcaacctcgtcgac 19701 Query: 882 ggcggggtcgccgccaacaaccc 904 || |||||||||||||||||||| Sbjct: 19700 ggtggggtcgccgccaacaaccc 19678 Score = 89.7 bits (45), Expect = 3e-14 Identities = 111/133 (83%) Strand = Plus / Minus Query: 603 ccaaagtacgacggcaagtacctccattcgctgctccgtcggcacctcggcgacacgaag 662 |||||||||||||||||||||||||||||||||||||| | | ||||||||||||| | Sbjct: 20436 ccaaagtacgacggcaagtacctccattcgctgctccgagagaagctcggcgacacgagg 20377 Query: 663 ctggacggggctctcaccagcgtggtgatcccggccttcgatatcgcccacctgcagccc 722 |||||| ||| || || | |||||| || || ||||||| ||||| ||||||| || Sbjct: 20376 ctggacaaggcgctgacgaacgtggttattcccaccttcgacatcgctaacctgcaacca 20317 Query: 723 atcatcttctcca 735 | ||||||||||| Sbjct: 20316 accatcttctcca 20304 Score = 89.7 bits (45), Expect = 3e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 283 tggtgaccatcctgagcgtcgacggcggcggcgtgagaggaatcatcccggccatcgtcc 342 |||| ||| |||||||| |||||||||||||||| ||||| ||||||||||||| | ||| Sbjct: 21015 tggtcaccgtcctgagcatcgacggcggcggcgtcagagggatcatcccggccaccatcc 20956 Query: 343 tcgctttccttgaaaaggagctcca 367 |||| |||||||| || |||||||| Sbjct: 20955 tcgccttccttgagaaagagctcca 20931 Score = 87.7 bits (44), Expect = 1e-13 Identities = 158/196 (80%) Strand = Plus / Minus Query: 1212 agtgcgggctccatcgacgactgctccaaggccaacttggataggttggtgaagattggg 1271 ||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||||| Sbjct: 18507 agtgcgggctcgatcgacgactgctccaaggaaaacatggataacctggtgaagattggg 18448 Query: 1272 gatgagcttctcgccgagaaggtgtccggggtggacctggagaccggccggaatgtggag 1331 || |||||||| | |||| || || | || |||||||||||||||| | ||||| Sbjct: 18447 gaaatgcttctcgacaagaacgtctcacgagtagacctggagaccggccattacgtggat 18388 Query: 1332 gtgcccggtggaggcacaaacgcggaggagctcgccaagtacgcaaggcagctctccgat 1391 ||| |||| | |||||| ||| || |||| ||||||| ||||| |||||||||||| Sbjct: 18387 gtggccggcgaaggcacgaacagagatcagcttgccaagttcgcaaagcagctctccgac 18328 Query: 1392 gagcgccgccgacgcc 1407 ||||| ||||| |||| Sbjct: 18327 gagcggcgccggcgcc 18312 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Minus Query: 1032 gccaaggacgccgccaagtggggcatcttgagctggctcgtcaagg 1077 ||||||||||| ||||||||||| ||||| | ||||||| |||||| Sbjct: 19135 gccaaggacgctgccaagtggggaatcttcaactggctcatcaagg 19090
>ref|NM_001074801.1| Oryza sativa (japonica cultivar-group) Os11g0614500 (Os11g0614500) mRNA, complete cds Length = 2433 Score = 85.7 bits (43), Expect = 5e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 ||||||||||||| || ||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 232 tggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacgagcaccg 291 Query: 433 ggg 435 ||| Sbjct: 292 ggg 294
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 85.7 bits (43), Expect = 5e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 ||||||||||||| || ||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 15649 tggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacgagcaccg 15708 Query: 433 ggg 435 ||| Sbjct: 15709 ggg 15711 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 ||||||||||||| || |||||||||||||||||||| || ||||||| |||||||||| Sbjct: 7322 tggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacgagcaccg 7381 Query: 433 ggg 435 ||| Sbjct: 7382 ggg 7384
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 85.7 bits (43), Expect = 5e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 ||||||||||||| || ||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 22999646 tggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacgagcaccg 22999705 Query: 433 ggg 435 ||| Sbjct: 22999706 ggg 22999708 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 ||||||||||||| || |||||||||||||||||||| || ||||||| |||||||||| Sbjct: 22991319 tggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacgagcaccg 22991378 Query: 433 ggg 435 ||| Sbjct: 22991379 ggg 22991381
>dbj|AK109768.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-A03, full insert sequence Length = 1931 Score = 85.7 bits (43), Expect = 5e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 ||||||||||||| || ||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 1618 tggacgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacgagcaccg 1677 Query: 433 ggg 435 ||| Sbjct: 1678 ggg 1680
>ref|NM_001074800.1| Oryza sativa (japonica cultivar-group) Os11g0614400 (Os11g0614400) mRNA, complete cds Length = 1618 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 ||||||||||||| || |||||||||||||||||||| || ||||||| |||||||||| Sbjct: 375 tggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacgagcaccg 434 Query: 433 ggg 435 ||| Sbjct: 435 ggg 437
>dbj|AK067827.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120O20, full insert sequence Length = 2434 Score = 77.8 bits (39), Expect = 1e-10 Identities = 54/59 (91%) Strand = Plus / Plus Query: 377 cgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccgggg 435 ||||||||| || ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 237 cgggccggaggcgaggatcgcggactacttcgatgtgatcgccgggacgagcaccgggg 295
>dbj|AK058531.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-A08, full insert sequence Length = 1618 Score = 77.8 bits (39), Expect = 1e-10 Identities = 57/63 (90%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 ||||||||||||| || |||||||||||||||||||| || ||||||| |||||||||| Sbjct: 375 tggacgggccggaggcgaggatcgcggactacttcgacgtgatcgccgggacgagcaccg 434 Query: 433 ggg 435 ||| Sbjct: 435 ggg 437
>ref|NM_001073512.1| Oryza sativa (japonica cultivar-group) Os12g0552200 (Os12g0552200) mRNA, partial cds Length = 1522 Score = 75.8 bits (38), Expect = 4e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 867 tacaacctcatcgacggcggggtcgccgccaacaaccctacg 908 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 725 tacaacctcatcgacggcggtgtcgccgccaacaaccctacg 766
>dbj|AK106375.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-D02, full insert sequence Length = 1522 Score = 75.8 bits (38), Expect = 4e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 867 tacaacctcatcgacggcggggtcgccgccaacaaccctacg 908 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 725 tacaacctcatcgacggcggtgtcgccgccaacaaccctacg 766
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 69.9 bits (35), Expect = 3e-08 Identities = 38/39 (97%) Strand = Plus / Plus Query: 867 tacaacctcatcgacggcggggtcgccgccaacaaccct 905 |||||||||||||||||||| |||||||||||||||||| Sbjct: 22452020 tacaacctcatcgacggcggtgtcgccgccaacaaccct 22452058 Score = 61.9 bits (31), Expect = 7e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 867 tacaacctcatcgacggcggggtcgccgccaacaa 901 |||||||||||||||||||| |||||||||||||| Sbjct: 22360434 tacaacctcatcgacggcggcgtcgccgccaacaa 22360400 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Plus Query: 867 tacaacctcatcgacggcggggtcgccgccaacaa 901 |||||||||||||||||||| ||||| |||||||| Sbjct: 22406509 tacaacctcatcgacggcggcgtcgctgccaacaa 22406543 Score = 50.1 bits (25), Expect = 0.026 Identities = 52/61 (85%) Strand = Plus / Minus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 |||||||||| ||||| ||| | || ||||||||||| | |||||||||||||||||| Sbjct: 22361017 tggacgggccagatgcgaggctggccgactacttcgactacatcgccggcacgagcaccg 22360958 Query: 433 g 433 | Sbjct: 22360957 g 22360957
>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 69.9 bits (35), Expect = 3e-08 Identities = 38/39 (97%) Strand = Plus / Minus Query: 867 tacaacctcatcgacggcggggtcgccgccaacaaccct 905 |||||||||||||||||||| |||||||||||||||||| Sbjct: 55514 tacaacctcatcgacggcggtgtcgccgccaacaaccct 55476 Score = 61.9 bits (31), Expect = 7e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 867 tacaacctcatcgacggcggggtcgccgccaacaa 901 |||||||||||||||||||| |||||||||||||| Sbjct: 147100 tacaacctcatcgacggcggcgtcgccgccaacaa 147134 Score = 54.0 bits (27), Expect = 0.002 Identities = 33/35 (94%) Strand = Plus / Minus Query: 867 tacaacctcatcgacggcggggtcgccgccaacaa 901 |||||||||||||||||||| ||||| |||||||| Sbjct: 101025 tacaacctcatcgacggcggcgtcgctgccaacaa 100991 Score = 50.1 bits (25), Expect = 0.026 Identities = 52/61 (85%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 |||||||||| ||||| ||| | || ||||||||||| | |||||||||||||||||| Sbjct: 146517 tggacgggccagatgcgaggctggccgactacttcgactacatcgccggcacgagcaccg 146576 Query: 433 g 433 | Sbjct: 146577 g 146577
>ref|NM_001068213.1| Oryza sativa (japonica cultivar-group) Os08g0376500 (Os08g0376500) mRNA, complete cds Length = 1329 Score = 67.9 bits (34), Expect = 1e-07 Identities = 136/170 (80%) Strand = Plus / Plus Query: 294 ctgagcgtcgacggcggcggcgtgagaggaatcatcccggccatcgtcctcgctttcctt 353 |||||| ||||||||||||||||| | || |||||||||| | | |||| || ||||| Sbjct: 175 ctgagcatcgacggcggcggcgtgcgcgggatcatcccggggaccatcctggcgttcctg 234 Query: 354 gaaaaggagctccagaaattggacgggccggatgctaggatcgcggactacttcgatgtc 413 || || |||| ||| | |||||||||||| || ||| | |||||||||||||| ||| Sbjct: 235 gaggagaagctgcaggagctggacgggccggcggcgagggtggcggactacttcgacgtc 294 Query: 414 gtcgccggcacgagcaccgggggcctcttgacggtgatgctcacggcgcc 463 ||||||| |||||||| || || || |||||| |||||| ||||||| Sbjct: 295 atcgccgggacgagcacgggcgggctggtgacggccatgctcgcggcgcc 344
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 67.9 bits (34), Expect = 1e-07 Identities = 136/170 (80%) Strand = Plus / Plus Query: 294 ctgagcgtcgacggcggcggcgtgagaggaatcatcccggccatcgtcctcgctttcctt 353 |||||| ||||||||||||||||| | || |||||||||| | | |||| || ||||| Sbjct: 133200 ctgagcatcgacggcggcggcgtgcgcgggatcatcccggggaccatcctggcgttcctg 133259 Query: 354 gaaaaggagctccagaaattggacgggccggatgctaggatcgcggactacttcgatgtc 413 || || |||| ||| | |||||||||||| || ||| | |||||||||||||| ||| Sbjct: 133260 gaggagaagctgcaggagctggacgggccggcggcgagggtggcggactacttcgacgtc 133319 Query: 414 gtcgccggcacgagcaccgggggcctcttgacggtgatgctcacggcgcc 463 ||||||| |||||||| || || || |||||| |||||| ||||||| Sbjct: 133320 atcgccgggacgagcacgggcgggctggtgacggccatgctcgcggcgcc 133369
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 67.9 bits (34), Expect = 1e-07 Identities = 136/170 (80%) Strand = Plus / Plus Query: 294 ctgagcgtcgacggcggcggcgtgagaggaatcatcccggccatcgtcctcgctttcctt 353 |||||| ||||||||||||||||| | || |||||||||| | | |||| || ||||| Sbjct: 41939 ctgagcatcgacggcggcggcgtgcgcgggatcatcccggggaccatcctggcgttcctg 41998 Query: 354 gaaaaggagctccagaaattggacgggccggatgctaggatcgcggactacttcgatgtc 413 || || |||| ||| | |||||||||||| || ||| | |||||||||||||| ||| Sbjct: 41999 gaggagaagctgcaggagctggacgggccggcggcgagggtggcggactacttcgacgtc 42058 Query: 414 gtcgccggcacgagcaccgggggcctcttgacggtgatgctcacggcgcc 463 ||||||| |||||||| || || || |||||| |||||| ||||||| Sbjct: 42059 atcgccgggacgagcacgggcgggctggtgacggccatgctcgcggcgcc 42108
>emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298_D03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109610 Score = 61.9 bits (31), Expect = 7e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 867 tacaacctcatcgacggcggggtcgccgccaacaa 901 |||||||||||||||||||| |||||||||||||| Sbjct: 1320 tacaacctcatcgacggcggcgtcgccgccaacaa 1354 Score = 50.1 bits (25), Expect = 0.026 Identities = 52/61 (85%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 |||||||||| ||||| ||| | || ||||||||||| | |||||||||||||||||| Sbjct: 737 tggacgggccagatgcgaggctggccgactacttcgactacatcgccggcacgagcaccg 796 Query: 433 g 433 | Sbjct: 797 g 797
>ref|NM_001056822.1| Oryza sativa (japonica cultivar-group) Os03g0393900 (Os03g0393900) mRNA, complete cds Length = 1525 Score = 60.0 bits (30), Expect = 3e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 761 caagaacgcgctcctgtcggacatcgccatcggcacctccgccgcacccaccttcttccc 820 ||||||||||||||| || |||||| |||| |||| ||||| || || |||| | |||| Sbjct: 642 caagaacgcgctcctctccgacatctgcatcagcacatccgcggcgccgacctacctccc 701 Query: 821 cgcgcactacttcgagaccaacgacg 846 |||||||| |||| |||||| ||||| Sbjct: 702 cgcgcactgcttccagaccaccgacg 727 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 871 acctcatcgacggcggggtcgccgccaacaaccc 904 |||||||||||||||| ||||||||||||||||| Sbjct: 755 acctcatcgacggcggcgtcgccgccaacaaccc 788
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 60.0 bits (30), Expect = 3e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 761 caagaacgcgctcctgtcggacatcgccatcggcacctccgccgcacccaccttcttccc 820 ||||||||||||||| || |||||| |||| |||| ||||| || || |||| | |||| Sbjct: 15670150 caagaacgcgctcctctccgacatctgcatcagcacatccgcggcgccgacctacctccc 15670209 Query: 821 cgcgcactacttcgagaccaacgacg 846 |||||||| |||| |||||| ||||| Sbjct: 15670210 cgcgcactgcttccagaccaccgacg 15670235 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 871 acctcatcgacggcggggtcgccgccaacaaccc 904 |||||||||||||||| ||||||||||||||||| Sbjct: 15670263 acctcatcgacggcggcgtcgccgccaacaaccc 15670296
>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete sequence Length = 178748 Score = 60.0 bits (30), Expect = 3e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 761 caagaacgcgctcctgtcggacatcgccatcggcacctccgccgcacccaccttcttccc 820 ||||||||||||||| || |||||| |||| |||| ||||| || || |||| | |||| Sbjct: 85570 caagaacgcgctcctctccgacatctgcatcagcacatccgcggcgccgacctacctccc 85629 Query: 821 cgcgcactacttcgagaccaacgacg 846 |||||||| |||| |||||| ||||| Sbjct: 85630 cgcgcactgcttccagaccaccgacg 85655 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 871 acctcatcgacggcggggtcgccgccaacaaccc 904 |||||||||||||||| ||||||||||||||||| Sbjct: 85683 acctcatcgacggcggcgtcgccgccaacaaccc 85716
>dbj|AK069809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030J03, full insert sequence Length = 1526 Score = 60.0 bits (30), Expect = 3e-05 Identities = 72/86 (83%) Strand = Plus / Plus Query: 761 caagaacgcgctcctgtcggacatcgccatcggcacctccgccgcacccaccttcttccc 820 ||||||||||||||| || |||||| |||| |||| ||||| || || |||| | |||| Sbjct: 643 caagaacgcgctcctctccgacatctgcatcagcacatccgcggcgccgacctacctccc 702 Query: 821 cgcgcactacttcgagaccaacgacg 846 |||||||| |||| |||||| ||||| Sbjct: 703 cgcgcactgcttccagaccaccgacg 728 Score = 60.0 bits (30), Expect = 3e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 871 acctcatcgacggcggggtcgccgccaacaaccc 904 |||||||||||||||| ||||||||||||||||| Sbjct: 756 acctcatcgacggcggcgtcgccgccaacaaccc 789
>gb|AY105282.1| Zea mays PCO126203 mRNA sequence Length = 768 Score = 58.0 bits (29), Expect = 1e-04 Identities = 53/61 (86%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 ||||||| ||||| ||| ||||||| |||||||||||||| | ||||| |||||||||| Sbjct: 266 tggacggcccggacgctcggatcgccgactacttcgatgtgattgccgggacgagcaccg 325 Query: 433 g 433 | Sbjct: 326 g 326
>ref|NM_001068577.1| Oryza sativa (japonica cultivar-group) Os08g0476900 (Os08g0476900) mRNA, complete cds Length = 1628 Score = 56.0 bits (28), Expect = 4e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 294 ctgagcgtcgacggcggcggcgtgagaggaatcatcccggccatcgtcctcgctttcctt 353 |||||| ||||||||||||||||| | || |||||||||| || | ||||||| ||||| Sbjct: 273 ctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcgcgttcctg 332 Query: 354 gaaaaggagctccagaaattggacgggccggatgctaggatcgcggactacttcgatgtc 413 || || | || ||| | ||||||| || || ||| || |||| |||||||||| || Sbjct: 333 gaggagaaactgcaggagctggacggccccgaggctcggctcgccaactacttcgacgtg 392 Query: 414 gtcgccggcacgagcaccgg 433 ||||||| ||||||||||| Sbjct: 393 atcgccgggacgagcaccgg 412
>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_E05 Length = 126978 Score = 56.0 bits (28), Expect = 4e-04 Identities = 112/140 (80%) Strand = Plus / Minus Query: 294 ctgagcgtcgacggcggcggcgtgagaggaatcatcccggccatcgtcctcgctttcctt 353 |||||| ||||||||||||||||| | || |||||||||| || | ||||||| ||||| Sbjct: 78433 ctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcgcgttcctg 78374 Query: 354 gaaaaggagctccagaaattggacgggccggatgctaggatcgcggactacttcgatgtc 413 || || | || ||| | ||||||| || || ||| || |||| |||||||||| || Sbjct: 78373 gaggagaaactgcaggagctggacggccccgaggctcggctcgccaactacttcgacgtg 78314 Query: 414 gtcgccggcacgagcaccgg 433 ||||||| ||||||||||| Sbjct: 78313 atcgccgggacgagcaccgg 78294 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Minus Query: 600 gggccaaagtacgacggcaagtacct 625 |||||||||||||||||||||||||| Sbjct: 88742 gggccaaagtacgacggcaagtacct 88717 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Minus Query: 390 aggatcgcggactacttcgatgtcgtcgccggcacgagcaccgg 433 |||||||| ||||||||||| || ||||||| ||||||||||| Sbjct: 89048 aggatcgccgactacttcgacgtaatcgccgggacgagcaccgg 89005
>dbj|AK101432.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033038K22, full insert sequence Length = 1629 Score = 56.0 bits (28), Expect = 4e-04 Identities = 112/140 (80%) Strand = Plus / Plus Query: 294 ctgagcgtcgacggcggcggcgtgagaggaatcatcccggccatcgtcctcgctttcctt 353 |||||| ||||||||||||||||| | || |||||||||| || | ||||||| ||||| Sbjct: 274 ctgagcatcgacggcggcggcgtgcgcggcatcatcccgggcaccatcctcgcgttcctg 333 Query: 354 gaaaaggagctccagaaattggacgggccggatgctaggatcgcggactacttcgatgtc 413 || || | || ||| | ||||||| || || ||| || |||| |||||||||| || Sbjct: 334 gaggagaaactgcaggagctggacggccccgaggctcggctcgccaactacttcgacgtg 393 Query: 414 gtcgccggcacgagcaccgg 433 ||||||| ||||||||||| Sbjct: 394 atcgccgggacgagcaccgg 413
>emb|CT828114.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA119J10, full insert sequence Length = 1691 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 600 gggccaaagtacgacggcaagtacct 625 |||||||||||||||||||||||||| Sbjct: 627 gggccaaagtacgacggcaagtacct 652 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 390 aggatcgcggactacttcgatgtcgtcgccggcacgagcaccgg 433 |||||||| ||||||||||| || ||||||| ||||||||||| Sbjct: 438 aggatcgccgactacttcgacgtgatcgccgggacgagcaccgg 481 Score = 42.1 bits (21), Expect = 6.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 294 ctgagcgtcgacggcggcggcgtgagaggaatcatcccggccatcgtcctcgc 346 |||||| |||||||||||||||| | || |||||||||| || | ||||||| Sbjct: 342 ctgagcatcgacggcggcggcgtccgcggcatcatcccgggcaccatcctcgc 394
>ref|NM_001068578.1| Oryza sativa (japonica cultivar-group) Os08g0477100 (Os08g0477100) mRNA, complete cds Length = 1701 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 600 gggccaaagtacgacggcaagtacct 625 |||||||||||||||||||||||||| Sbjct: 627 gggccaaagtacgacggcaagtacct 652 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 390 aggatcgcggactacttcgatgtcgtcgccggcacgagcaccgg 433 |||||||| ||||||||||| || ||||||| ||||||||||| Sbjct: 432 aggatcgccgactacttcgacgtaatcgccgggacgagcaccgg 475
>gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster Length = 162249 Score = 52.0 bits (26), Expect = 0.007 Identities = 32/34 (94%) Strand = Plus / Minus Query: 871 acctcatcgacggcggggtcgccgccaacaaccc 904 ||||| |||||||||| ||||||||||||||||| Sbjct: 42388 acctcgtcgacggcggcgtcgccgccaacaaccc 42355 Score = 50.1 bits (25), Expect = 0.026 Identities = 52/61 (85%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 ||||||| || |||||| |||| || ||||||||||| || ||||||| |||||||||| Sbjct: 56247 tggacggcccagatgctcggattgccgactacttcgacgtgatcgccgggacgagcaccg 56306 Query: 433 g 433 | Sbjct: 56307 g 56307 Score = 50.1 bits (25), Expect = 0.026 Identities = 52/61 (85%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 ||||||||||||| || | ||||| ||||||||||| || ||||||| |||||||||| Sbjct: 72892 tggacgggccggacgcacgcatcgccgactacttcgacgtgatcgccgggacgagcaccg 72951 Query: 433 g 433 | Sbjct: 72952 g 72952 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Minus Query: 712 acctgcagcccatcatcttctcca 735 |||||||||||||||||||||||| Sbjct: 42547 acctgcagcccatcatcttctcca 42524 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Plus Query: 712 acctgcagcccatcatcttctcca 735 |||||||||||||||||||||||| Sbjct: 56999 acctgcagcccatcatcttctcca 57022 Score = 46.1 bits (23), Expect = 0.40 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1112 cgccagcgccgacatggtcgacttcca 1138 |||||||||||||||||||||| |||| Sbjct: 73740 cgccagcgccgacatggtcgacatcca 73766 Score = 44.1 bits (22), Expect = 1.6 Identities = 64/78 (82%) Strand = Plus / Minus Query: 761 caagaacgcgctcctgtcggacatcgccatcggcacctccgccgcacccaccttcttccc 820 ||||||||||| ||| || |||||| |||| |||| || || || ||||||| |||||| Sbjct: 42498 caagaacgcgcacctctccgacatctgcatcagcacgtcggcggcgcccacctacttccc 42439 Query: 821 cgcgcactacttcgagac 838 ||||||| |||| |||| Sbjct: 42438 ggcgcacttcttcaagac 42421 Score = 44.1 bits (22), Expect = 1.6 Identities = 64/78 (82%) Strand = Plus / Plus Query: 761 caagaacgcgctcctgtcggacatcgccatcggcacctccgccgcacccaccttcttccc 820 ||||||||||| ||| || |||||| |||| |||| || || || ||||||| ||||| Sbjct: 57048 caagaacgcgcacctctccgacatctgcatcagcacgtcggcggcgcccacctatttccc 57107 Query: 821 cgcgcactacttcgagac 838 |||||||| |||| |||| Sbjct: 57108 cgcgcacttcttcaagac 57125 Score = 44.1 bits (22), Expect = 1.6 Identities = 31/34 (91%) Strand = Plus / Plus Query: 871 acctcatcgacggcggggtcgccgccaacaaccc 904 ||||| |||||||||| ||||| ||||||||||| Sbjct: 57158 acctcgtcgacggcggcgtcgcggccaacaaccc 57191 Score = 42.1 bits (21), Expect = 6.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 393 atcgcggactacttcgatgtcgtcgccggcacgagcaccgg 433 ||||| ||||||||||| || ||||||| ||||||||||| Sbjct: 42958 atcgccgactacttcgacgtgatcgccgggacgagcaccgg 42918
>dbj|AK108679.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B01, full insert sequence Length = 1701 Score = 52.0 bits (26), Expect = 0.007 Identities = 26/26 (100%) Strand = Plus / Plus Query: 600 gggccaaagtacgacggcaagtacct 625 |||||||||||||||||||||||||| Sbjct: 627 gggccaaagtacgacggcaagtacct 652 Score = 48.1 bits (24), Expect = 0.10 Identities = 39/44 (88%) Strand = Plus / Plus Query: 390 aggatcgcggactacttcgatgtcgtcgccggcacgagcaccgg 433 |||||||| ||||||||||| || ||||||| ||||||||||| Sbjct: 432 aggatcgccgactacttcgacgtaatcgccgggacgagcaccgg 475
>gb|DQ246021.1| Zea mays clone 80006 mRNA sequence Length = 1534 Score = 50.1 bits (25), Expect = 0.026 Identities = 52/61 (85%) Strand = Plus / Plus Query: 373 tggacgggccggatgctaggatcgcggactacttcgatgtcgtcgccggcacgagcaccg 432 ||||||| ||||| ||| ||||||| ||||||||||| || | ||||| |||||||||| Sbjct: 254 tggacggcccggacgctcggatcgccgactacttcgacgtgattgccgggacgagcaccg 313 Query: 433 g 433 | Sbjct: 314 g 314 Score = 46.1 bits (23), Expect = 0.40 Identities = 65/79 (82%) Strand = Plus / Plus Query: 761 caagaacgcgctcctgtcggacatcgccatcggcacctccgccgcacccaccttcttccc 820 ||||||||||| ||| || |||||| |||| |||| || || || ||||||| |||||| Sbjct: 639 caagaacgcgcacctctccgacatctgcatcagcacgtcggcggcgcccacctacttccc 698 Query: 821 cgcgcactacttcgagacc 839 ||||||| |||| ||||| Sbjct: 699 ggcgcacttcttcaagacc 717 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 712 acctgcagcccatcatcttctc 733 |||||||||||||||||||||| Sbjct: 590 acctgcagcccatcatcttctc 611
>gb|BT016290.1| Zea mays clone Contig123 mRNA sequence Length = 833 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Plus Query: 719 gcccatcatcttctccagcttcca 742 |||||||||||||||||||||||| Sbjct: 166 gcccatcatcttctccagcttcca 189
>gb|AY109175.1| Zea mays PCO133092 mRNA sequence Length = 1116 Score = 48.1 bits (24), Expect = 0.10 Identities = 24/24 (100%) Strand = Plus / Plus Query: 719 gcccatcatcttctccagcttcca 742 |||||||||||||||||||||||| Sbjct: 426 gcccatcatcttctccagcttcca 449
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 46.1 bits (23), Expect = 0.40 Identities = 23/23 (100%) Strand = Plus / Plus Query: 483 ctgttcgacggcaaggatctggc 505 ||||||||||||||||||||||| Sbjct: 5075774 ctgttcgacggcaaggatctggc 5075796
>ref|NM_001065701.1| Oryza sativa (japonica cultivar-group) Os07g0209100 (Os07g0209100) mRNA, complete cds Length = 2827 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1093 tcctcgacatgttcaacgccgccagcgccg 1122 ||||||||||||||||||||| | |||||| Sbjct: 2277 tcctcgacatgttcaacgccggcggcgccg 2306
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 988 ccatcggctgcgggacatcatc 1009 |||||||||||||||||||||| Sbjct: 36068 ccatcggctgcgggacatcatc 36089
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1093 tcctcgacatgttcaacgccgccagcgccg 1122 ||||||||||||||||||||| | |||||| Sbjct: 5923277 tcctcgacatgttcaacgccggcggcgccg 5923248
>ref|XM_649003.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (63.t00025) partial mRNA Length = 3018 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 aattagtttatgtgatcgtgtt 141 |||||||||||||||||||||| Sbjct: 1227 aattagtttatgtgatcgtgtt 1248
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 403 acttcgatgtcgtcgccggcac 424 |||||||||||||||||||||| Sbjct: 2006363 acttcgatgtcgtcgccggcac 2006384
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1139 cctctccgtcctctccgccatc 1160 |||||||||||||||||||||| Sbjct: 3671811 cctctccgtcctctccgccatc 3671790
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1093 tcctcgacatgttcaacgccgccagcgccg 1122 ||||||||||||||||||||| | |||||| Sbjct: 65725 tcctcgacatgttcaacgccggcggcgccg 65696
>dbj|AK120944.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N02, full insert sequence Length = 2827 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1093 tcctcgacatgttcaacgccgccagcgccg 1122 ||||||||||||||||||||| | |||||| Sbjct: 2278 tcctcgacatgttcaacgccggcggcgccg 2307
>emb|AM087204.1| Caenolestes fuliginosus partial adra2b gene for alpha-2B adrenergic receptor Length = 1119 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 187 taagctgccaccttctgttctt 208 |||||||||||||||||||||| Sbjct: 650 taagctgccaccttctgttctt 671
>dbj|AK242658.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090027I22, full insert sequence Length = 2735 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 809 caccttcttccccgcgcactacttc 833 |||||||||||||| |||||||||| Sbjct: 311 caccttcttccccgagcactacttc 335
>ref|NM_001050724.1| Oryza sativa (japonica cultivar-group) Os01g0738500 (Os01g0738500) mRNA, complete cds Length = 2286 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 809 caccttcttccccgcgcactacttc 833 |||||||||||||| |||||||||| Sbjct: 161 caccttcttccccgagcactacttc 185
>gb|AC145802.3| Xenopus tropicalis clone CH216-80C17, complete sequence Length = 163886 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1569 tagcacatataatatgtgctt 1589 ||||||||||||||||||||| Sbjct: 98072 tagcacatataatatgtgctt 98052
>dbj|AB254080.1| Streptomyces kanamyceticus kanamycin biosynthetic gene cluster, strain: NBRC 13414 Length = 205447 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 841 acgacggcaagggcggcacca 861 ||||||||||||||||||||| Sbjct: 198793 acgacggcaagggcggcacca 198813
>ref|XM_362484.1| Magnaporthe grisea 70-15 hypothetical protein (MG08067.4) partial mRNA Length = 3513 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1029 agcgccaaggacgccgccaag 1049 ||||||||||||||||||||| Sbjct: 3373 agcgccaaggacgccgccaag 3393
>ref|NM_123725.1| Arabidopsis thaliana nutrient reservoir (AT5G43590) mRNA, complete cds Length = 1206 Score = 42.1 bits (21), Expect = 6.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 288 accatcctgagcgtcgacggcggcggcgtgagaggaatcat 328 |||||||| ||| ||||||||||||| || |||||||||| Sbjct: 43 accatcctcagcctcgacggcggcggagtccgaggaatcat 83
>gb|AC118284.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1087_C03, complete sequence Length = 101218 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ttaggaatttaggattagttt 39 ||||||||||||||||||||| Sbjct: 96890 ttaggaatttaggattagttt 96910
>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10, complete sequence Length = 171101 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ttaggaatttaggattagttt 39 ||||||||||||||||||||| Sbjct: 59538 ttaggaatttaggattagttt 59558
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1025 gtacagcgccaaggacgccgccaag 1049 |||||||||||||||||||| |||| Sbjct: 2306080 gtacagcgccaaggacgccggcaag 2306056
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1025 gtacagcgccaaggacgccgccaag 1049 |||||||||||||||||||| |||| Sbjct: 1378549 gtacagcgccaaggacgccggcaag 1378525
>ref|XM_860065.1| PREDICTED: Canis familiaris similar to N-ethylmaleimide sensitive fusion protein attachment protein alpha, transcript variant 3 (LOC612960), mRNA Length = 1379 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1020 ctcaagtacagcgccaaggac 1040 ||||||||||||||||||||| Sbjct: 414 ctcaagtacagcgccaaggac 434
>ref|XM_847061.1| PREDICTED: Canis familiaris similar to N-ethylmaleimide sensitive fusion protein attachment protein alpha, transcript variant 1 (LOC612960), mRNA Length = 1688 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1020 ctcaagtacagcgccaaggac 1040 ||||||||||||||||||||| Sbjct: 723 ctcaagtacagcgccaaggac 743
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1391 tgagcgccgccgacgccgtaa 1411 ||||||||||||||||||||| Sbjct: 4049692 tgagcgccgccgacgccgtaa 4049712
>ref|XM_381054.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00878.1) partial mRNA Length = 717 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1020 ctcaagtacagcgccaaggacgccg 1044 |||||||||| |||||||||||||| Sbjct: 307 ctcaagtacatcgccaaggacgccg 331
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 cgtcgccggcacgagcaccgg 433 ||||||||||||||||||||| Sbjct: 23932115 cgtcgccggcacgagcaccgg 23932135
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 ttaggaatttaggattagttt 39 ||||||||||||||||||||| Sbjct: 25825596 ttaggaatttaggattagttt 25825616
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1139 cctctccgtcctctccgccatcctc 1163 |||||||||||||||||||| |||| Sbjct: 11442168 cctctccgtcctctccgccaccctc 11442192 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 809 caccttcttccccgcgcactacttc 833 |||||||||||||| |||||||||| Sbjct: 30822822 caccttcttccccgagcactacttc 30822846
>emb|AL606754.6| Human DNA sequence from clone RP11-479E16 on chromosome X Contains the 3' end of the gene for a novel protein (FLJ31204), complete sequence Length = 106636 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1573 acatataatatgtgctttata 1593 ||||||||||||||||||||| Sbjct: 54307 acatataatatgtgctttata 54287
>gb|AY242058.1| Oryza sativa (japonica cultivar-group) MONOCULM 1 (MOC1) gene, complete cds Length = 3176 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 cgtcgccggcacgagcaccgg 433 ||||||||||||||||||||| Sbjct: 2245 cgtcgccggcacgagcaccgg 2265
>dbj|AP003218.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0021A09 Length = 127973 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 809 caccttcttccccgcgcactacttc 833 |||||||||||||| |||||||||| Sbjct: 112097 caccttcttccccgagcactacttc 112121
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0638D12 Length = 161277 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 809 caccttcttccccgcgcactacttc 833 |||||||||||||| |||||||||| Sbjct: 23189 caccttcttccccgagcactacttc 23213
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 946 tcgccgggcagaagccggtgg 966 ||||||||||||||||||||| Sbjct: 2266916 tcgccgggcagaagccggtgg 2266936
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1025 gtacagcgccaaggacgccgccaag 1049 |||||||||||||||||||| |||| Sbjct: 1250473 gtacagcgccaaggacgccggcaag 1250449
>emb|AJ582817.3| Streptomyces kanamyceticus kanamycin biosynthetic gene cluster, strain ATCC12853 Length = 47050 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 841 acgacggcaagggcggcacca 861 ||||||||||||||||||||| Sbjct: 2214 acgacggcaagggcggcacca 2234
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1300 gggtggacctggagaccggcc 1320 ||||||||||||||||||||| Sbjct: 1129023 gggtggacctggagaccggcc 1129003
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 777 tcggacatcgccatcggcacc 797 ||||||||||||||||||||| Sbjct: 5281007 tcggacatcgccatcggcacc 5280987
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 cgtcgccggcacgagcaccgg 433 ||||||||||||||||||||| Sbjct: 61726 cgtcgccggcacgagcaccgg 61746
>dbj|AP003567.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0022N24 Length = 124062 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1139 cctctccgtcctctccgccatcctc 1163 |||||||||||||||||||| |||| Sbjct: 79366 cctctccgtcctctccgccaccctc 79390
>dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0002E10 Length = 140486 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 352 ttgaaaaggagctccagaaattgga 376 ||||||||||| ||||||||||||| Sbjct: 94320 ttgaaaaggaggtccagaaattgga 94296
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1257 ttggtgaagattggggatgag 1277 ||||||||||||||||||||| Sbjct: 31975 ttggtgaagattggggatgag 31955
>dbj|AP005488.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0003D23 Length = 151604 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 352 ttgaaaaggagctccagaaattgga 376 ||||||||||| ||||||||||||| Sbjct: 46932 ttgaaaaggaggtccagaaattgga 46956
>dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9D7 Length = 60476 Score = 42.1 bits (21), Expect = 6.3 Identities = 36/41 (87%) Strand = Plus / Minus Query: 288 accatcctgagcgtcgacggcggcggcgtgagaggaatcat 328 |||||||| ||| ||||||||||||| || |||||||||| Sbjct: 35343 accatcctcagcctcgacggcggcggagtccgaggaatcat 35303
>gb|AY947546.1| Aedes aegypti StAR-related lipid transfer domain containing protein mRNA, complete cds Length = 2017 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 724 tcatcttctccagcttccagt 744 ||||||||||||||||||||| Sbjct: 732 tcatcttctccagcttccagt 712
>gb|AY947545.1| Aedes aegypti StAR-related lipid transfer domain containing protein mRNA, complete cds Length = 2016 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 724 tcatcttctccagcttccagt 744 ||||||||||||||||||||| Sbjct: 732 tcatcttctccagcttccagt 712
>ref|XM_566224.1| Anopheles gambiae str. PEST ENSANGP00000026283 (ENSANGG00000016941), partial mRNA Length = 1459 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1350 aacgcggaggagctcgccaagtacg 1374 |||||||||||||| |||||||||| Sbjct: 1240 aacgcggaggagctggccaagtacg 1264
>ref|XM_310956.2| Anopheles gambiae str. PEST ENSANGP00000019430 (ENSANGG00000016941), mRNA Length = 1731 Score = 42.1 bits (21), Expect = 6.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1350 aacgcggaggagctcgccaagtacg 1374 |||||||||||||| |||||||||| Sbjct: 1512 aacgcggaggagctggccaagtacg 1536
>emb|AJ007559.1|CRE7559 Chlamydomonas reinhardtii mRNA for 1-deoxy-D-xylulose-5-phosphate synthase, partial Length = 3232 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1030 gcgccaaggacgccgccaagt 1050 ||||||||||||||||||||| Sbjct: 2296 gcgccaaggacgccgccaagt 2316
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1300 gggtggacctggagaccggcc 1320 ||||||||||||||||||||| Sbjct: 802382 gggtggacctggagaccggcc 802362
>emb|AJ704018.1| Uncultured bacterium partial nosZ gene for nitrous-oxide reductase, clone C-F3 Length = 1098 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 606 aagtacgacggcaagtacctc 626 ||||||||||||||||||||| Sbjct: 100 aagtacgacggcaagtacctc 120
>emb|AJ703948.1| Uncultured bacterium partial nosZ gene for nitrous-oxide reductase, clone A-G9 Length = 828 Score = 42.1 bits (21), Expect = 6.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 606 aagtacgacggcaagtacctc 626 ||||||||||||||||||||| Sbjct: 100 aagtacgacggcaagtacctc 120 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 251,469,257 Number of extensions: 13524139 Number of successful extensions: 306087 Number of sequences better than 10.0: 86 Number of HSP's gapped: 306059 Number of HSP's successfully gapped: 162 Length of query: 1643 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1620 Effective length of database: 18,503,978,556 Effective search space: 29976445260720 Effective search space used: 29976445260720 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
