ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf52a14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK060072:Os01g0663500 57 2e-08
2AK058452:Os01g0663500 57 2e-08
3AK108102: 29 4.4
4Os01g0232800:Os01g0232800 28 9.8

>AK060072:Os01g0663500 |
          Length = 190
 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 32/83 (38%), Positives = 48/83 (57%)
 Frame = +2

Query: 368 DSDVLKLECVWKVRDQACGDELVARINKALDGAGHAPAALSFEPPNQVRAQLYTPSVGGL 547
           + D+LKL   WKV++   G E +  +    +  GH P  L     N V+  ++T SV GL
Sbjct: 104 EGDILKLHRAWKVKNFVKGLEFLQLVAAVAEEEGHHP-DLHLVGWNNVKIDVWTHSVRGL 162

Query: 548 SANDFIIAARIDQINTKDLLPKK 616
           + NDFI+AA+I+ +N + LL KK
Sbjct: 163 TDNDFILAAKINNLNLEGLLSKK 185



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>AK058452:Os01g0663500 |
          Length = 190

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 32/83 (38%), Positives = 48/83 (57%)
 Frame = +2

Query: 368 DSDVLKLECVWKVRDQACGDELVARINKALDGAGHAPAALSFEPPNQVRAQLYTPSVGGL 547
           + D+LKL   WKV++   G E +  +    +  GH P  L     N V+  ++T SV GL
Sbjct: 104 EGDILKLHRAWKVKNFVKGLEFLQLVAAVAEEEGHHP-DLHLVGWNNVKIDVWTHSVRGL 162

Query: 548 SANDFIIAARIDQINTKDLLPKK 616
           + NDFI+AA+I+ +N + LL KK
Sbjct: 163 TDNDFILAAKINNLNLEGLLSKK 185



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>AK108102: |
          Length = 317

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 801 FFFFEKSFDLI*WHHRLKHYG*SYKH 724
           FF FE +F    W HR  H+G  YKH
Sbjct: 152 FFLFEDAFHY--WAHRALHWGPLYKH 175



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>Os01g0232800:Os01g0232800 |
          Length = 497

 Score = 27.7 bits (60), Expect = 9.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 555 LALSPPTDGV*SWALTWLGGSKLSAAGAWPAPSR 454
           L L P      ++AL W GG +  A  AWPA ++
Sbjct: 32  LTLLPMALAAFAFALQWRGGMRDPAGAAWPAETQ 65


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 17,581,096
Number of extensions: 379946
Number of successful extensions: 1297
Number of sequences better than 10.0: 4
Number of HSP's gapped: 1291
Number of HSP's successfully gapped: 4
Length of query: 269
Length of database: 15,399,855
Length adjustment: 99
Effective length of query: 170
Effective length of database: 11,435,796
Effective search space: 1944085320
Effective search space used: 1944085320
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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