ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf52a14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os03g01030:12003.t00003:unspliced-genomic expressed protein 108 2e-59
2LOC_Os01g47420:12001.t04190:unspliced-genomic pterin-4-alpha... 39 0.016
3LOC_Os07g31500:12007.t02838:unspliced-genomic leucine-rich r... 38 0.075
4LOC_Os07g44800:12007.t04120:unspliced-genomic SWI/SNF-relate... 33 0.14
5LOC_Os10g05690:12010.t00444:unspliced-genomic auxin transpor... 28 0.22
6LOC_Os12g01900:12012.t00088:unspliced-genomic retrotransposo... 35 0.69
7LOC_Os05g07280:12005.t00615:unspliced-genomic expressed protein 35 0.69
8LOC_Os10g34580:12010.t02753:unspliced-genomic FHA domain con... 29 0.73
9LOC_Os05g50290:12005.t04461:unspliced-genomic DNA-3-methylad... 27 1.1
10LOC_Os05g23250:12005.t01983:unspliced-genomic Leucine Rich R... 34 1.3
11LOC_Os11g05820:12011.t00473:unspliced-genomic transposon pro... 34 1.8
12LOC_Os08g17650:12008.t01636:unspliced-genomic complex 1 prot... 34 1.8
13LOC_Os01g57700:12001.t05172:unspliced-genomic expressed protein 33 2.5
14LOC_Os12g08860:12012.t00767:unspliced-genomic hypothetical p... 33 3.4
15LOC_Os09g24330:12009.t02116:unspliced-genomic ATP binding pr... 32 4.6
16LOC_Os09g02284:12009.t00128:unspliced-genomic DNA-directed R... 32 4.6
17LOC_Os08g35319:12008.t004317:unspliced-genomic expressed pro... 32 4.6
18LOC_Os06g12340:12006.t01111:unspliced-genomic hypothetical p... 32 4.6
19LOC_Os05g13330:12005.t01111:unspliced-genomic CAB2, putative... 32 4.6
20LOC_Os04g34600:12004.t03135:unspliced-genomic ABA/WDS induce... 32 4.6
21LOC_Os04g20880:12004.t01822:unspliced-genomic wax synthase i... 32 4.6
22LOC_Os11g09250:12011.t00817:unspliced-genomic retrotransposo... 25 5.9
23LOC_Os07g09190:12007.t00794:unspliced-genomic 1-deoxy-D-xylu... 28 6.1
24LOC_Os04g54630:12004.t04935:unspliced-genomic SEP2, putative... 26 6.3
25LOC_Os02g45670:12002.t04154:unspliced-genomic DNA binding pr... 32 6.3
26LOC_Os01g72020:12001.t06492:unspliced-genomic BOP2, putative... 32 6.3
27LOC_Os07g09490:12007.t00823:unspliced-genomic mitochondrial ... 32 6.4
28LOC_Os05g25910:12005.t02245:unspliced-genomic plant-specific... 32 6.4
29LOC_Os01g72700:12001.t06557:unspliced-genomic ATP binding pr... 32 6.4
30LOC_Os07g33310:12007.t03011:unspliced-genomic transparent te... 27 7.6
31LOC_Os03g19830:12003.t01746:unspliced-genomic hypothetical p... 31 8.7
32LOC_Os02g58790:12002.t05449:unspliced-genomic expressed protein 31 8.7
33LOC_Os01g62200:12001.t05596:unspliced-genomic expressed protein 31 8.7
34LOC_Os11g38450:12011.t03387:unspliced-genomic hypothetical p... 31 8.7
35LOC_Os11g36210:12011.t03168:unspliced-genomic conserved hypo... 31 8.7
36LOC_Os11g10630:12011.t00953:unspliced-genomic retrotransposo... 31 8.7
37LOC_Os05g26210:12005.t02275:unspliced-genomic conserved hypo... 31 8.7
38LOC_Os03g46270:12003.t03995:unspliced-genomic transposon pro... 31 8.7

>LOC_Os03g01030:12003.t00003:unspliced-genomic expressed protein|
          Length = 897
 Score =  108 bits (230), Expect(3) = 2e-59
 Identities = 44/52 (84%), Positives = 49/52 (94%)
 Frame = +1 / +3

                                                               
Query: 169 VVAMADILGDFGARDPFPEEIASNFGEKTLGNVDTLHRILIPTLSVLSLSRV 324
           VVAMAD+LGDFGARDPFPEEI SNFGE+ LGNVDTLH ILIPTLSVLS++R+
Sbjct: 186 VVAMADLLGDFGARDPFPEEIESNFGERVLGNVDTLHNILIPTLSVLSIARL 341



 Score = 95.0 bits (201), Expect(3) = 2e-59
 Identities = 37/52 (71%), Positives = 44/52 (84%)
 Frame = +2 / +3

                                                               
Query: 473 APAALSFEPPNQVRAQLYTPSVGGLSANDFIIAARIDQINTKDLLPKKRVWA 628
           APA + FE PNQVRA+L TPS GGL+ NDFI+AARID++ T DL+PKKRVWA
Sbjct: 522 APATVVFEAPNQVRAELQTPSAGGLTVNDFIVAARIDKVKTVDLIPKKRVWA 677



 Score = 65.2 bits (136), Expect(3) = 2e-59
 Identities = 24/33 (72%), Positives = 30/33 (90%)
 Frame = +2 / +3

                                            
Query: 368 DSDVLKLECVWKVRDQACGDELVARINKALDGA 466
           D+D ++L+CVWKVRD+ACG ELVARIN A+DGA
Sbjct: 426 DADGMRLQCVWKVRDEACGHELVARINAAVDGA 524



 Score = 73.5 bits (154), Expect(3) = 5e-39
 Identities = 33/43 (76%), Positives = 35/43 (81%)
 Frame = -3 / -3

                                                      
Query: 296 VGMRMRCSVSTLPSVFSPKLLAISSGNGSRAPKSPRMSAIATT 168
           VGMRM   VSTLPS  SPKLL+ISSG GSRAPKSP  SA+ATT
Sbjct: 313 VGMRMLWRVSTLPSTLSPKLLSISSGKGSRAPKSPSRSAMATT 185



 Score = 72.5 bits (152), Expect(3) = 5e-39
 Identities = 34/52 (65%), Positives = 38/52 (73%)
 Frame = -2 / -3

                                                               
Query: 627 AQTLFLGRRSLVLIWSILAAMMKSLALSPPTDGV*SWALTWLGGSKLSAAGA 472
           AQTLFLG RS VL  S+ AA MKSL + PP +GV S ALTWLG SK + AGA
Sbjct: 676 AQTLFLGIRSTVLTLSMRAATMKSLTVRPPAEGVCSSALTWLGASKTTVAGA 521



 Score = 53.8 bits (111), Expect(3) = 5e-39
 Identities = 22/27 (81%), Positives = 23/27 (85%)
 Frame = -1 / -2

                                      
Query: 448 VDPGDELVAAGLVPDLPDALELEHVGV 368
           VDPGDELVAAG VPDLPDAL+   VGV
Sbjct: 506 VDPGDELVAAGFVPDLPDALQTHAVGV 426



 Score = 45.5 bits (93), Expect(3) = 5e-18
 Identities = 22/37 (59%), Positives = 24/37 (64%)
 Frame = -2 / -2

                                                
Query: 279 VQRVHVAQRLLPEVARDLLRERVPRPEVPQDVRHRHH 169
           V+ V VAQ  L EVA DLLRE V R +V Q V H HH
Sbjct: 296 VEGVDVAQHPLAEVALDLLREGVARAKVAQQVGHGHH 186



 Score = 43.7 bits (89), Expect(3) = 5e-18
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = -1 / -2

                                                  
Query: 625 PDPLLGEKIFGVDLVDPGGDDEVVGAQPTYGRGVELGPD 509
           PD LLG+K+  +DLV    DDEV+  +   G  ++LGPD
Sbjct: 674 PDSLLGDKVDRLDLVYASRDDEVIDGEAAGGGRLQLGPD 558



 Score = 43.2 bits (88), Expect(3) = 5e-18
 Identities = 22/33 (66%), Positives = 22/33 (66%)
 Frame = -2 / -3

                                            
Query: 465 APSRALLILATSSSPQAWSRTFQTHSSLSTSES 367
           APS A LILATSS PQA S TFQTH     S S
Sbjct: 523 APSTAALILATSSWPQASSLTFQTHCRRMPSAS 425



to top

>LOC_Os01g47420:12001.t04190:unspliced-genomic pterin-4-alpha-carbinolamine dehydratase, putative, expressed|
          Length = 4857

 Score = 38.6 bits (78), Expect(2) = 0.016
 Identities = 15/26 (57%), Positives = 21/26 (80%)
 Frame = +2 / +2

                                      
Query: 539  GGLSANDFIIAARIDQINTKDLLPKK 616
            GGL+ NDFI+AA+I+ +N + LL KK
Sbjct: 4481 GGLTDNDFILAAKINNLNLEGLLSKK 4558



 Score = 24.4 bits (47), Expect(2) = 0.016
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = +2 / +1

                                              
Query: 368  DSDVLKLECVWKVRDQACGDELVARINKALDGAG 469
            + D+LKL   WKV++   G E +  +    +  G
Sbjct: 2938 EGDILKLHRAWKVKNFVKGLEFLQLVAAVAEEEG 3039



to top

>LOC_Os07g31500:12007.t02838:unspliced-genomic leucine-rich repeat receptor protein kinase EXS precursor, putative,|
            expressed
          Length = 4192

 Score = 38.2 bits (77), Expect = 0.075
 Identities = 21/45 (46%), Positives = 22/45 (48%)
 Frame = -2 / +2

                                                         
Query: 507  WLGGSKLSAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTS 373
            W   S  S   A PA S A L  ATSSS   W RT  T +S S S
Sbjct: 3266 WRRASSTSTTTASPASSTATLSPATSSSTATWRRTSATSASPSPS 3400



to top

>LOC_Os07g44800:12007.t04120:unspliced-genomic SWI/SNF-related matrix-associated actin-dependent regulator of|
           chromatin subfamily A member 3-like 1, putative,
           expressed
          Length = 3876

 Score = 32.7 bits (65), Expect(2) = 0.14
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -2 / +2

                                              
Query: 471 WPAPSRALLILATSSSPQAWSRTFQTHSSLSTSES 367
           WP P  A     T++SP +W+ +  T S+ ST+ +
Sbjct: 2   WPPPPAAAAARTTTTSPTSWASSSPTPSASSTTRA 106



 Score = 26.7 bits (52), Expect(2) = 0.14
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2 / +3

                             
Query: 222 RERVPRPEVPQDVRHRHH 169
           RER PRP  PQ  R + H
Sbjct: 126 RERRPRPGAPQPPRRQRH 179



to top

>LOC_Os10g05690:12010.t00444:unspliced-genomic auxin transporter-like protein 3, putative, expressed|
          Length = 6214

 Score = 28.1 bits (55), Expect(2) = 0.22
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3 / -1

                                                 
Query: 719  RMASIPFP*NKTVPVCMQRKRNKTAWAVISMPRPSSW 609
            R AS+P P  +T P   + +R  +  A  S P P  W
Sbjct: 5806 RNASVPEPEQETAPERQRCRRRWS*TAAASRPAPERW 5696



 Score = 25.8 bits (50), Expect(2) = 0.22
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -1 / -2

                            
Query: 613  LGEKIFGVDLVDPGGD 566
            LGE+  GVDLVD  GD
Sbjct: 5643 LGEEAEGVDLVDEVGD 5596



to top

>LOC_Os12g01900:12012.t00088:unspliced-genomic retrotransposon protein, putative, unclassified, expressed|
          Length = 6515

 Score = 35.0 bits (70), Expect = 0.69
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3 / +3

                                             
Query: 645  CRLVPLPLHAYRDSFVSWKWNGSHPIHACSSTH 743
            CR++ +P+ A RD  V+W++N S      S+ H
Sbjct: 2484 CRIMQIPIRAGRDDLVAWQYNRSGTFSVKSAYH 2582



to top

>LOC_Os05g07280:12005.t00615:unspliced-genomic expressed protein|
          Length = 1246

 Score = 35.0 bits (70), Expect = 0.69
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -2 / +3

                                                          
Query: 546 SPPTDGV*SWALTWLGGSKLSAAGAWPAPSRALLILATSSSPQAWSR 406
           +PP  G  +W+ +  GGS   AA  WP+ +R     ATS +  A  R
Sbjct: 774 TPPRRGASAWSASARGGS*KGAASRWPSGTRCRRSSATSPAATAARR 914



to top

>LOC_Os10g34580:12010.t02753:unspliced-genomic FHA domain containing protein, expressed|
          Length = 3893

 Score = 28.6 bits (56), Expect(2) = 0.73
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2 / -2

                                            
Query: 507 WLGGSKLSAAGAWPAPSRALLILATSSSPQAWS 409
           W+    L   G+ P PSR L  L   SSP+A S
Sbjct: 202 WVAHRALCRRGSAPTPSRTLPPLPLLSSPEASS 104



 Score = 23.5 bits (45), Expect(2) = 0.73
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1 / -3

                       
Query: 598 FGVDLVDPGGDD 563
           F  DLV PGG+D
Sbjct: 342 FAADLVRPGGED 307



to top

>LOC_Os05g50290:12005.t04461:unspliced-genomic DNA-3-methyladenine glycosylase 1, putative, expressed|
          Length = 1481

 Score = 26.7 bits (52), Expect(2) = 1.1
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -1 / -2

                                  
Query: 595 GVDLVDPGGDDEVVGAQPTYGRG 527
           GV  VD GG+  V GAQ   GRG
Sbjct: 385 GVVGVDDGGEGRVGGAQVLDGRG 317



 Score = 24.9 bits (48), Expect(2) = 1.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2 / -1

                             
Query: 510 TWLGGSKLSAAGAWPAPS 457
           +W+G  + SAA +W A S
Sbjct: 260 SWIGWGRRSAAASWSATS 207



to top

>LOC_Os05g23250:12005.t01983:unspliced-genomic Leucine Rich Repeat family protein|
          Length = 7571

 Score = 34.1 bits (68), Expect = 1.3
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3 / -2

                                
Query: 639  CPCRLVPLPLHAYRDSFVSW 698
            CPC  + +PLHA  DSF  W
Sbjct: 3514 CPCLQLSVPLHAGHDSFTPW 3455



to top

>LOC_Os11g05820:12011.t00473:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed|
          Length = 2954

 Score = 33.6 bits (67), Expect = 1.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3 / -1

                                        
Query: 101 AAAEGLPATGKKVAAGLSMSAMVVQWDGW 15
           AAA   PA G+++ A L  S+  + W GW
Sbjct: 266 AAAAAGPAVGRRLRATLKQSSRALHWSGW 180



to top

>LOC_Os08g17650:12008.t01636:unspliced-genomic complex 1 protein containing protein, expressed|
          Length = 8021

 Score = 33.6 bits (67), Expect = 1.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2 / -1

                                                      
Query: 407  RDQACGDELVARINKALDGAGHAPAALSFEPPNQVRAQLYTP 532
            R +   D LV+R ++  DG    P  L+F PP+     LY P
Sbjct: 4136 RPRRSADPLVSRRHRRADGHSPPPPPLAFSPPSARPPPLYPP 4011



to top

>LOC_Os01g57700:12001.t05172:unspliced-genomic expressed protein|
          Length = 2350

 Score = 33.1 bits (66), Expect = 2.5
 Identities = 17/34 (50%), Positives = 18/34 (52%)
 Frame = -2 / +1

                                             
Query: 276 QRVHVAQRLLPEVARDLLRERVPRPEVPQDVRHR 175
           QR    QR +P VA      RVPR    QDVRHR
Sbjct: 631 QRRRDLQRHVPRVAHHRALRRVPRIRHVQDVRHR 732



to top

>LOC_Os12g08860:12012.t00767:unspliced-genomic hypothetical protein|
          Length = 204

 Score = 32.7 bits (65), Expect = 3.4
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1 / +1

                                  
Query: 673 ACKGRGTRRHGQSSACPDPLLGE 605
           A +GR  RRHG  S  PD +LGE
Sbjct: 85  AARGRLPRRHGGESRLPDQILGE 153



to top

>LOC_Os09g24330:12009.t02116:unspliced-genomic ATP binding protein, putative, expressed|
          Length = 865

 Score = 32.2 bits (64), Expect = 4.6
 Identities = 19/46 (41%), Positives = 24/46 (52%)
 Frame = -2 / +2

                                                         
Query: 501 GGSKLSAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTSESP 364
           G ++  A+ A   PS      ATSS+  A + T  T SS STS SP
Sbjct: 278 GPARAPASSATRPPSSPASSTATSSTSSATAPTAPTTSSSSTSTSP 415



to top

>LOC_Os09g02284:12009.t00128:unspliced-genomic DNA-directed RNA polymerase II 36 kDa polypeptide A, putative,|
           expressed
          Length = 7020

 Score = 32.2 bits (64), Expect = 4.6
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -2 / +2

                                                       
Query: 495 SKLSAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTSESP 364
           S  +   AWP PS A     +  SP   SR+  T  S +TS SP
Sbjct: 224 SSATPTPAWPTPSAAS*SPRSPPSPSTSSRSRSTPPSSTTSSSP 355



to top

>LOC_Os08g35319:12008.t004317:unspliced-genomic expressed protein|
          Length = 1212

 Score = 32.2 bits (64), Expect = 4.6
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -2 / -1

                                              
Query: 468 PAPSRALLILATSSSPQAWSRTFQTHSSLSTSESP 364
           P+PSR   +L+  ++P++W+    +H  ++   SP
Sbjct: 948 PSPSRFFFLLSVLAAPRSWATLSSSHRPIAAPGSP 844



to top

>LOC_Os06g12340:12006.t01111:unspliced-genomic hypothetical protein|
          Length = 738

 Score = 32.2 bits (64), Expect = 4.6
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -2 / -3

                                             
Query: 465 APSRALLILATSSSPQAWSRTFQTHSSLSTSESP 364
           AP  ALL++  +++P AW+ T + HS    S  P
Sbjct: 187 APPVALLVVVVATAPSAWAPTCRRHSLRLDSRVP 86



to top

>LOC_Os05g13330:12005.t01111:unspliced-genomic CAB2, putative, expressed|
          Length = 4870

 Score = 32.2 bits (64), Expect = 4.6
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = -2 / +1

                                                             
Query: 516 ALTWLGGSKLSAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTSES 367
           A  WLG  + S++G+  APS   L +   S+ + W     + SS   S S
Sbjct: 493 AAGWLGWLRSSSSGSCSAPSTPALAMLIRSTGELWEHACASLSSSFVSSS 642



to top

>LOC_Os04g34600:12004.t03135:unspliced-genomic ABA/WDS induced protein, expressed|
          Length = 1234

 Score = 32.2 bits (64), Expect = 4.6
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -2 / -3

                                                         
Query: 510 TWLGGSKLSAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTS 373
           +W     L +A A   PS  L   A S S  AW  ++ TH  LS+S
Sbjct: 755 SWNANPPLPSAAAAATPSSILCRCAFSGSFFAWCLSYCTHGHLSSS 618



to top

>LOC_Os04g20880:12004.t01822:unspliced-genomic wax synthase isoform 1, putative, expressed|
          Length = 1271

 Score = 32.2 bits (64), Expect = 4.6
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -2 / +1

                                                          
Query: 507 WLGGSKLSAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTSES 367
           W    +  +A   P+ SR      +SSSP AW+R+  T S  S S S
Sbjct: 250 WPSPPRPCSAAPPPSSSRGSAPSRSSSSPPAWARSQSTASRCSRSSS 390



to top

>LOC_Os11g09250:12011.t00817:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3259

 Score = 24.9 bits (48), Expect(2) = 5.9
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -2 / -3

                                               
Query: 519  WALTWLGGSKLSAAGAWPAPSRALLILATSSSPQA 415
            W +  L G +LS    WP    A    A S +PQA
Sbjct: 2729 WCVRQLRGGRLSRFRPWPPRRCAPSRPAPSPAPQA 2625



 Score = 24.0 bits (46), Expect(2) = 5.9
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -1 / -2

                                              
Query: 715  WLPFHFHETKLSLYACKGRGTRRHGQSSACPDPL 614
            WL  +F    L    C+   +RR   S + P P+
Sbjct: 2898 WLAAYFTVRPLQRPTCRPAQSRRETASQSMPGPI 2797



to top

>LOC_Os07g09190:12007.t00794:unspliced-genomic 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor,|
           putative, expressed
          Length = 3461

 Score = 28.1 bits (55), Expect(2) = 6.1
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1 / -2

                                  
Query: 442 PGDELVAAGLVPDLPDALELEHV 374
           P  +LV   LVPD+PD L L  V
Sbjct: 739 PRQDLVRVRLVPDVPDDLVLRRV 671



 Score = 25.4 bits (49), Expect(2) = 6.1
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = -2 / -3

                             
Query: 606  RRSLVLIWSILAAMMKS 556
            RRSLVL WS ++A++ +
Sbjct: 1116 RRSLVLDWSFVSALLSA 1066



to top

>LOC_Os04g54630:12004.t04935:unspliced-genomic SEP2, putative, expressed|
          Length = 1341

 Score = 26.3 bits (51), Expect(2) = 6.3
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -2 / -2

                                           
Query: 255 RLLPEVARDLLRERVPRPEVPQDVRHRHHLPA 160
           RLL  +   LL +RVPR ++ +  R   HL A
Sbjct: 587 RLLDLLHVQLLEQRVPRRQLHRHRRRERHLHA 492



 Score = 22.6 bits (43), Expect(2) = 6.3
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = -2 / -3

                                              
Query: 471 WPAPSRALLILATSSSPQAWSRTFQTHSSLSTSES 367
           WP   RAL   A +++P   +R     SS+S   S
Sbjct: 664 WPILVRALDTHANAAAPATTARHTPAASSISCMSS 560



to top

>LOC_Os02g45670:12002.t04154:unspliced-genomic DNA binding protein, putative, expressed|
          Length = 4979

 Score = 31.8 bits (63), Expect = 6.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3 / +2

                           
Query: 9   HHPSVPLHHHGAHAQP 56
           HHP  P HHH   A+P
Sbjct: 59  HHPHTPTHHHATPAEP 106



to top

>LOC_Os01g72020:12001.t06492:unspliced-genomic BOP2, putative, expressed|
          Length = 3054

 Score = 31.8 bits (63), Expect = 6.3
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -3 / +2

                                                      
Query: 293  GMRMRCSVSTLPSVFSPKLLAISSGNGSRAPKSPRMSAIATT 168
            G R RCS ST PS  SP+  + +S     A +S R +    T
Sbjct: 2189 GSRRRCSPSTSPSTSSPRSTSSASSPCRAARRSSRTTTTTRT 2314



to top

>LOC_Os07g09490:12007.t00823:unspliced-genomic mitochondrial chaperone BCS1, putative, expressed|
          Length = 1704

 Score = 31.8 bits (63), Expect = 6.4
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -2 / -3

                                        
Query: 255 RLLPEVARDLLRERVPRPEVPQDVRHRHH 169
           R+ PE A D + E++PR E  Q   H HH
Sbjct: 208 RVPPEEAADEVLEQLPRQERAQHAPHEHH 122



to top

>LOC_Os05g25910:12005.t02245:unspliced-genomic plant-specific domain TIGR01568 family protein, expressed|
          Length = 1050

 Score = 31.8 bits (63), Expect = 6.4
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -2 / -1

                                               
Query: 486 SAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLS 379
           S A AW  P R   I+A  ++ +AW   F  H   S
Sbjct: 435 SVASAWLVPGRGSRIVAAVTTGEAWEWWFHVHGGSS 328



to top

>LOC_Os01g72700:12001.t06557:unspliced-genomic ATP binding protein, putative, expressed|
          Length = 3456

 Score = 31.8 bits (63), Expect = 6.4
 Identities = 18/38 (47%), Positives = 22/38 (57%)
 Frame = -2 / +2

                                                 
Query: 486 SAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTS 373
           SAA    APSRA L  A +S+P   + T  T SSL+ S
Sbjct: 734 SAATGSSAPSRATLACALTSAPST*APTRSTASSLTLS 847



to top

>LOC_Os07g33310:12007.t03011:unspliced-genomic transparent testa 12 protein, putative, expressed|
          Length = 3216

 Score = 27.2 bits (53), Expect(2) = 7.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -2 / +3

                                   
Query: 246 PEVARDLLRERVPRPEVPQDVRHR 175
           P  A   LR ++P PEVP    HR
Sbjct: 726 PHPADLRLRRQLPHPEVPPGAEHR 797



 Score = 25.8 bits (50), Expect(2) = 7.6
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2 / +2

                                              
Query: 468 PAPSRALLILATSSSPQAWSRTFQTHSSLSTSESP 364
           P P  + +  ATSSSP   S T  + SS + S  P
Sbjct: 314 PPPRSSAVSSATSSSPPPPSATMASRSSPTASWYP 418



to top

>LOC_Os03g19830:12003.t01746:unspliced-genomic hypothetical protein|
          Length = 465

 Score = 31.3 bits (62), Expect = 8.7
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3 / +3

                              
Query: 609 PRRGSGHADDCPCRLVPLP 665
           PRR SGH   C CR +P P
Sbjct: 120 PRRPSGHRAPCSCRQLPQP 176



to top

>LOC_Os02g58790:12002.t05449:unspliced-genomic expressed protein|
          Length = 5825

 Score = 31.3 bits (62), Expect = 8.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3 / -1

                                    
Query: 654  VPLPLHAYRDSFVSWKWNGSHPIH 725
            + L +H  R     W+W G HP+H
Sbjct: 5627 IDLSIHLSRSVIGPWQWPGVHPVH 5556



to top

>LOC_Os01g62200:12001.t05596:unspliced-genomic expressed protein|
          Length = 2846

 Score = 31.3 bits (62), Expect = 8.7
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +3 / -2

                                    
Query: 732 SSTHSV*DDDAIKSNQMISQKKKKN 806
           +STHS  DDD  +  +M  QK+KKN
Sbjct: 493 TSTHSNDDDDVTERRRMQQQKQKKN 419



to top

>LOC_Os11g38450:12011.t03387:unspliced-genomic hypothetical protein|
          Length = 3534

 Score = 31.3 bits (62), Expect = 8.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1 / -2

                                                
Query: 610  QEEGLGMLMTAHAVLFLFLCMHTGTVLFHGNGMEAI 717
            QE+ L    +  +  F+ +CMHTG ++   N  +A+
Sbjct: 3272 QEDSLNRAFS*RSSGFMHVCMHTGAIIASRNNFQAV 3165



to top

>LOC_Os11g36210:12011.t03168:unspliced-genomic conserved hypothetical protein|
          Length = 717

 Score = 31.3 bits (62), Expect = 8.7
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = -2 / +1

                                
Query: 516 ALTWLGGSKLSAAGAWPAPSR 454
           A  W  G +  AAG WPAP R
Sbjct: 334 ATGWCSGEEGEAAGCWPAPER 396



to top

>LOC_Os11g10630:12011.t00953:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 2421

 Score = 31.3 bits (62), Expect = 8.7
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = -2 / +2

                                                                
Query: 618 LFLGRRSLVLIWSILAAMMKSLALSPPTDGV*SWALTWLGGSKLSAAGAWPAP 460
           L  G   L    S  AA+  S ALSP T  + + A  W  G+ + A G  P+P
Sbjct: 401 LLAGAGLLAAARSPHAALAGSTALSPLTGVMVTTASRWWSGTLVPAVGGLPSP 559



to top

>LOC_Os05g26210:12005.t02275:unspliced-genomic conserved hypothetical protein|
          Length = 714

 Score = 31.3 bits (62), Expect = 8.7
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -2 / -2

                                 
Query: 432 SSSPQAWSRTFQTHSSLSTSES 367
           SSS   WSRTF + SS+S S S
Sbjct: 551 SSSTSCWSRTFPSSSSISISRS 486



to top

>LOC_Os03g46270:12003.t03995:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 4262

 Score = 31.3 bits (62), Expect = 8.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1 / -2

                                          
Query: 742  WVELQAWIGWLPFHFHETKLSLYACKGRGT 653
            W +L +W+  L FH     L+L +C+G GT
Sbjct: 3496 WNDL*SWVTNLFFHIAPLPLNLPSCRGTGT 3407


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 226,989,154
Number of extensions: 3350874
Number of successful extensions: 20060
Number of sequences better than 10.0: 38
Length of query: 269
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 220
Effective length of database: 52,856,264
Effective search space: 11628378080
Effective search space used: 11628378080
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
to top