| Clone Name | FLbaf52a14 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os03g01030:12003.t00003:unspliced-genomic expressed protein| Length = 897 Score = 108 bits (230), Expect(3) = 2e-59 Identities = 44/52 (84%), Positives = 49/52 (94%) Frame = +1 / +3 Query: 169 VVAMADILGDFGARDPFPEEIASNFGEKTLGNVDTLHRILIPTLSVLSLSRV 324 VVAMAD+LGDFGARDPFPEEI SNFGE+ LGNVDTLH ILIPTLSVLS++R+ Sbjct: 186 VVAMADLLGDFGARDPFPEEIESNFGERVLGNVDTLHNILIPTLSVLSIARL 341 Score = 95.0 bits (201), Expect(3) = 2e-59 Identities = 37/52 (71%), Positives = 44/52 (84%) Frame = +2 / +3 Query: 473 APAALSFEPPNQVRAQLYTPSVGGLSANDFIIAARIDQINTKDLLPKKRVWA 628 APA + FE PNQVRA+L TPS GGL+ NDFI+AARID++ T DL+PKKRVWA Sbjct: 522 APATVVFEAPNQVRAELQTPSAGGLTVNDFIVAARIDKVKTVDLIPKKRVWA 677 Score = 65.2 bits (136), Expect(3) = 2e-59 Identities = 24/33 (72%), Positives = 30/33 (90%) Frame = +2 / +3 Query: 368 DSDVLKLECVWKVRDQACGDELVARINKALDGA 466 D+D ++L+CVWKVRD+ACG ELVARIN A+DGA Sbjct: 426 DADGMRLQCVWKVRDEACGHELVARINAAVDGA 524 Score = 73.5 bits (154), Expect(3) = 5e-39 Identities = 33/43 (76%), Positives = 35/43 (81%) Frame = -3 / -3 Query: 296 VGMRMRCSVSTLPSVFSPKLLAISSGNGSRAPKSPRMSAIATT 168 VGMRM VSTLPS SPKLL+ISSG GSRAPKSP SA+ATT Sbjct: 313 VGMRMLWRVSTLPSTLSPKLLSISSGKGSRAPKSPSRSAMATT 185 Score = 72.5 bits (152), Expect(3) = 5e-39 Identities = 34/52 (65%), Positives = 38/52 (73%) Frame = -2 / -3 Query: 627 AQTLFLGRRSLVLIWSILAAMMKSLALSPPTDGV*SWALTWLGGSKLSAAGA 472 AQTLFLG RS VL S+ AA MKSL + PP +GV S ALTWLG SK + AGA Sbjct: 676 AQTLFLGIRSTVLTLSMRAATMKSLTVRPPAEGVCSSALTWLGASKTTVAGA 521 Score = 53.8 bits (111), Expect(3) = 5e-39 Identities = 22/27 (81%), Positives = 23/27 (85%) Frame = -1 / -2 Query: 448 VDPGDELVAAGLVPDLPDALELEHVGV 368 VDPGDELVAAG VPDLPDAL+ VGV Sbjct: 506 VDPGDELVAAGFVPDLPDALQTHAVGV 426 Score = 45.5 bits (93), Expect(3) = 5e-18 Identities = 22/37 (59%), Positives = 24/37 (64%) Frame = -2 / -2 Query: 279 VQRVHVAQRLLPEVARDLLRERVPRPEVPQDVRHRHH 169 V+ V VAQ L EVA DLLRE V R +V Q V H HH Sbjct: 296 VEGVDVAQHPLAEVALDLLREGVARAKVAQQVGHGHH 186 Score = 43.7 bits (89), Expect(3) = 5e-18 Identities = 18/39 (46%), Positives = 25/39 (64%) Frame = -1 / -2 Query: 625 PDPLLGEKIFGVDLVDPGGDDEVVGAQPTYGRGVELGPD 509 PD LLG+K+ +DLV DDEV+ + G ++LGPD Sbjct: 674 PDSLLGDKVDRLDLVYASRDDEVIDGEAAGGGRLQLGPD 558 Score = 43.2 bits (88), Expect(3) = 5e-18 Identities = 22/33 (66%), Positives = 22/33 (66%) Frame = -2 / -3 Query: 465 APSRALLILATSSSPQAWSRTFQTHSSLSTSES 367 APS A LILATSS PQA S TFQTH S S Sbjct: 523 APSTAALILATSSWPQASSLTFQTHCRRMPSAS 425
>LOC_Os01g47420:12001.t04190:unspliced-genomic pterin-4-alpha-carbinolamine dehydratase, putative, expressed| Length = 4857 Score = 38.6 bits (78), Expect(2) = 0.016 Identities = 15/26 (57%), Positives = 21/26 (80%) Frame = +2 / +2 Query: 539 GGLSANDFIIAARIDQINTKDLLPKK 616 GGL+ NDFI+AA+I+ +N + LL KK Sbjct: 4481 GGLTDNDFILAAKINNLNLEGLLSKK 4558 Score = 24.4 bits (47), Expect(2) = 0.016 Identities = 10/34 (29%), Positives = 17/34 (50%) Frame = +2 / +1 Query: 368 DSDVLKLECVWKVRDQACGDELVARINKALDGAG 469 + D+LKL WKV++ G E + + + G Sbjct: 2938 EGDILKLHRAWKVKNFVKGLEFLQLVAAVAEEEG 3039
>LOC_Os07g31500:12007.t02838:unspliced-genomic leucine-rich repeat receptor protein kinase EXS precursor, putative,| expressed Length = 4192 Score = 38.2 bits (77), Expect = 0.075 Identities = 21/45 (46%), Positives = 22/45 (48%) Frame = -2 / +2 Query: 507 WLGGSKLSAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTS 373 W S S A PA S A L ATSSS W RT T +S S S Sbjct: 3266 WRRASSTSTTTASPASSTATLSPATSSSTATWRRTSATSASPSPS 3400
>LOC_Os07g44800:12007.t04120:unspliced-genomic SWI/SNF-related matrix-associated actin-dependent regulator of| chromatin subfamily A member 3-like 1, putative, expressed Length = 3876 Score = 32.7 bits (65), Expect(2) = 0.14 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -2 / +2 Query: 471 WPAPSRALLILATSSSPQAWSRTFQTHSSLSTSES 367 WP P A T++SP +W+ + T S+ ST+ + Sbjct: 2 WPPPPAAAAARTTTTSPTSWASSSPTPSASSTTRA 106 Score = 26.7 bits (52), Expect(2) = 0.14 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = -2 / +3 Query: 222 RERVPRPEVPQDVRHRHH 169 RER PRP PQ R + H Sbjct: 126 RERRPRPGAPQPPRRQRH 179
>LOC_Os10g05690:12010.t00444:unspliced-genomic auxin transporter-like protein 3, putative, expressed| Length = 6214 Score = 28.1 bits (55), Expect(2) = 0.22 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -3 / -1 Query: 719 RMASIPFP*NKTVPVCMQRKRNKTAWAVISMPRPSSW 609 R AS+P P +T P + +R + A S P P W Sbjct: 5806 RNASVPEPEQETAPERQRCRRRWS*TAAASRPAPERW 5696 Score = 25.8 bits (50), Expect(2) = 0.22 Identities = 11/16 (68%), Positives = 12/16 (75%) Frame = -1 / -2 Query: 613 LGEKIFGVDLVDPGGD 566 LGE+ GVDLVD GD Sbjct: 5643 LGEEAEGVDLVDEVGD 5596
>LOC_Os12g01900:12012.t00088:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 6515 Score = 35.0 bits (70), Expect = 0.69 Identities = 12/33 (36%), Positives = 20/33 (60%) Frame = +3 / +3 Query: 645 CRLVPLPLHAYRDSFVSWKWNGSHPIHACSSTH 743 CR++ +P+ A RD V+W++N S S+ H Sbjct: 2484 CRIMQIPIRAGRDDLVAWQYNRSGTFSVKSAYH 2582
>LOC_Os05g07280:12005.t00615:unspliced-genomic expressed protein| Length = 1246 Score = 35.0 bits (70), Expect = 0.69 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = -2 / +3 Query: 546 SPPTDGV*SWALTWLGGSKLSAAGAWPAPSRALLILATSSSPQAWSR 406 +PP G +W+ + GGS AA WP+ +R ATS + A R Sbjct: 774 TPPRRGASAWSASARGGS*KGAASRWPSGTRCRRSSATSPAATAARR 914
>LOC_Os10g34580:12010.t02753:unspliced-genomic FHA domain containing protein, expressed| Length = 3893 Score = 28.6 bits (56), Expect(2) = 0.73 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = -2 / -2 Query: 507 WLGGSKLSAAGAWPAPSRALLILATSSSPQAWS 409 W+ L G+ P PSR L L SSP+A S Sbjct: 202 WVAHRALCRRGSAPTPSRTLPPLPLLSSPEASS 104 Score = 23.5 bits (45), Expect(2) = 0.73 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = -1 / -3 Query: 598 FGVDLVDPGGDD 563 F DLV PGG+D Sbjct: 342 FAADLVRPGGED 307
>LOC_Os05g50290:12005.t04461:unspliced-genomic DNA-3-methyladenine glycosylase 1, putative, expressed| Length = 1481 Score = 26.7 bits (52), Expect(2) = 1.1 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = -1 / -2 Query: 595 GVDLVDPGGDDEVVGAQPTYGRG 527 GV VD GG+ V GAQ GRG Sbjct: 385 GVVGVDDGGEGRVGGAQVLDGRG 317 Score = 24.9 bits (48), Expect(2) = 1.1 Identities = 8/18 (44%), Positives = 12/18 (66%) Frame = -2 / -1 Query: 510 TWLGGSKLSAAGAWPAPS 457 +W+G + SAA +W A S Sbjct: 260 SWIGWGRRSAAASWSATS 207
>LOC_Os05g23250:12005.t01983:unspliced-genomic Leucine Rich Repeat family protein| Length = 7571 Score = 34.1 bits (68), Expect = 1.3 Identities = 11/20 (55%), Positives = 13/20 (65%) Frame = +3 / -2 Query: 639 CPCRLVPLPLHAYRDSFVSW 698 CPC + +PLHA DSF W Sbjct: 3514 CPCLQLSVPLHAGHDSFTPW 3455
>LOC_Os11g05820:12011.t00473:unspliced-genomic transposon protein, putative, Mutator sub-class, expressed| Length = 2954 Score = 33.6 bits (67), Expect = 1.8 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 / -1 Query: 101 AAAEGLPATGKKVAAGLSMSAMVVQWDGW 15 AAA PA G+++ A L S+ + W GW Sbjct: 266 AAAAAGPAVGRRLRATLKQSSRALHWSGW 180
>LOC_Os08g17650:12008.t01636:unspliced-genomic complex 1 protein containing protein, expressed| Length = 8021 Score = 33.6 bits (67), Expect = 1.8 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +2 / -1 Query: 407 RDQACGDELVARINKALDGAGHAPAALSFEPPNQVRAQLYTP 532 R + D LV+R ++ DG P L+F PP+ LY P Sbjct: 4136 RPRRSADPLVSRRHRRADGHSPPPPPLAFSPPSARPPPLYPP 4011
>LOC_Os01g57700:12001.t05172:unspliced-genomic expressed protein| Length = 2350 Score = 33.1 bits (66), Expect = 2.5 Identities = 17/34 (50%), Positives = 18/34 (52%) Frame = -2 / +1 Query: 276 QRVHVAQRLLPEVARDLLRERVPRPEVPQDVRHR 175 QR QR +P VA RVPR QDVRHR Sbjct: 631 QRRRDLQRHVPRVAHHRALRRVPRIRHVQDVRHR 732
>LOC_Os12g08860:12012.t00767:unspliced-genomic hypothetical protein| Length = 204 Score = 32.7 bits (65), Expect = 3.4 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = -1 / +1 Query: 673 ACKGRGTRRHGQSSACPDPLLGE 605 A +GR RRHG S PD +LGE Sbjct: 85 AARGRLPRRHGGESRLPDQILGE 153
>LOC_Os09g24330:12009.t02116:unspliced-genomic ATP binding protein, putative, expressed| Length = 865 Score = 32.2 bits (64), Expect = 4.6 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = -2 / +2 Query: 501 GGSKLSAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTSESP 364 G ++ A+ A PS ATSS+ A + T T SS STS SP Sbjct: 278 GPARAPASSATRPPSSPASSTATSSTSSATAPTAPTTSSSSTSTSP 415
>LOC_Os09g02284:12009.t00128:unspliced-genomic DNA-directed RNA polymerase II 36 kDa polypeptide A, putative,| expressed Length = 7020 Score = 32.2 bits (64), Expect = 4.6 Identities = 17/44 (38%), Positives = 21/44 (47%) Frame = -2 / +2 Query: 495 SKLSAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTSESP 364 S + AWP PS A + SP SR+ T S +TS SP Sbjct: 224 SSATPTPAWPTPSAAS*SPRSPPSPSTSSRSRSTPPSSTTSSSP 355
>LOC_Os08g35319:12008.t004317:unspliced-genomic expressed protein| Length = 1212 Score = 32.2 bits (64), Expect = 4.6 Identities = 10/35 (28%), Positives = 21/35 (60%) Frame = -2 / -1 Query: 468 PAPSRALLILATSSSPQAWSRTFQTHSSLSTSESP 364 P+PSR +L+ ++P++W+ +H ++ SP Sbjct: 948 PSPSRFFFLLSVLAAPRSWATLSSSHRPIAAPGSP 844
>LOC_Os06g12340:12006.t01111:unspliced-genomic hypothetical protein| Length = 738 Score = 32.2 bits (64), Expect = 4.6 Identities = 13/34 (38%), Positives = 20/34 (58%) Frame = -2 / -3 Query: 465 APSRALLILATSSSPQAWSRTFQTHSSLSTSESP 364 AP ALL++ +++P AW+ T + HS S P Sbjct: 187 APPVALLVVVVATAPSAWAPTCRRHSLRLDSRVP 86
>LOC_Os05g13330:12005.t01111:unspliced-genomic CAB2, putative, expressed| Length = 4870 Score = 32.2 bits (64), Expect = 4.6 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = -2 / +1 Query: 516 ALTWLGGSKLSAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTSES 367 A WLG + S++G+ APS L + S+ + W + SS S S Sbjct: 493 AAGWLGWLRSSSSGSCSAPSTPALAMLIRSTGELWEHACASLSSSFVSSS 642
>LOC_Os04g34600:12004.t03135:unspliced-genomic ABA/WDS induced protein, expressed| Length = 1234 Score = 32.2 bits (64), Expect = 4.6 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = -2 / -3 Query: 510 TWLGGSKLSAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTS 373 +W L +A A PS L A S S AW ++ TH LS+S Sbjct: 755 SWNANPPLPSAAAAATPSSILCRCAFSGSFFAWCLSYCTHGHLSSS 618
>LOC_Os04g20880:12004.t01822:unspliced-genomic wax synthase isoform 1, putative, expressed| Length = 1271 Score = 32.2 bits (64), Expect = 4.6 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -2 / +1 Query: 507 WLGGSKLSAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTSES 367 W + +A P+ SR +SSSP AW+R+ T S S S S Sbjct: 250 WPSPPRPCSAAPPPSSSRGSAPSRSSSSPPAWARSQSTASRCSRSSS 390
>LOC_Os11g09250:12011.t00817:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3259 Score = 24.9 bits (48), Expect(2) = 5.9 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = -2 / -3 Query: 519 WALTWLGGSKLSAAGAWPAPSRALLILATSSSPQA 415 W + L G +LS WP A A S +PQA Sbjct: 2729 WCVRQLRGGRLSRFRPWPPRRCAPSRPAPSPAPQA 2625 Score = 24.0 bits (46), Expect(2) = 5.9 Identities = 10/34 (29%), Positives = 15/34 (44%) Frame = -1 / -2 Query: 715 WLPFHFHETKLSLYACKGRGTRRHGQSSACPDPL 614 WL +F L C+ +RR S + P P+ Sbjct: 2898 WLAAYFTVRPLQRPTCRPAQSRRETASQSMPGPI 2797
>LOC_Os07g09190:12007.t00794:unspliced-genomic 1-deoxy-D-xylulose-5-phosphate synthase, chloroplast precursor,| putative, expressed Length = 3461 Score = 28.1 bits (55), Expect(2) = 6.1 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = -1 / -2 Query: 442 PGDELVAAGLVPDLPDALELEHV 374 P +LV LVPD+PD L L V Sbjct: 739 PRQDLVRVRLVPDVPDDLVLRRV 671 Score = 25.4 bits (49), Expect(2) = 6.1 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = -2 / -3 Query: 606 RRSLVLIWSILAAMMKS 556 RRSLVL WS ++A++ + Sbjct: 1116 RRSLVLDWSFVSALLSA 1066
>LOC_Os04g54630:12004.t04935:unspliced-genomic SEP2, putative, expressed| Length = 1341 Score = 26.3 bits (51), Expect(2) = 6.3 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -2 / -2 Query: 255 RLLPEVARDLLRERVPRPEVPQDVRHRHHLPA 160 RLL + LL +RVPR ++ + R HL A Sbjct: 587 RLLDLLHVQLLEQRVPRRQLHRHRRRERHLHA 492 Score = 22.6 bits (43), Expect(2) = 6.3 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = -2 / -3 Query: 471 WPAPSRALLILATSSSPQAWSRTFQTHSSLSTSES 367 WP RAL A +++P +R SS+S S Sbjct: 664 WPILVRALDTHANAAAPATTARHTPAASSISCMSS 560
>LOC_Os02g45670:12002.t04154:unspliced-genomic DNA binding protein, putative, expressed| Length = 4979 Score = 31.8 bits (63), Expect = 6.3 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +3 / +2 Query: 9 HHPSVPLHHHGAHAQP 56 HHP P HHH A+P Sbjct: 59 HHPHTPTHHHATPAEP 106
>LOC_Os01g72020:12001.t06492:unspliced-genomic BOP2, putative, expressed| Length = 3054 Score = 31.8 bits (63), Expect = 6.3 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -3 / +2 Query: 293 GMRMRCSVSTLPSVFSPKLLAISSGNGSRAPKSPRMSAIATT 168 G R RCS ST PS SP+ + +S A +S R + T Sbjct: 2189 GSRRRCSPSTSPSTSSPRSTSSASSPCRAARRSSRTTTTTRT 2314
>LOC_Os07g09490:12007.t00823:unspliced-genomic mitochondrial chaperone BCS1, putative, expressed| Length = 1704 Score = 31.8 bits (63), Expect = 6.4 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -2 / -3 Query: 255 RLLPEVARDLLRERVPRPEVPQDVRHRHH 169 R+ PE A D + E++PR E Q H HH Sbjct: 208 RVPPEEAADEVLEQLPRQERAQHAPHEHH 122
>LOC_Os05g25910:12005.t02245:unspliced-genomic plant-specific domain TIGR01568 family protein, expressed| Length = 1050 Score = 31.8 bits (63), Expect = 6.4 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = -2 / -1 Query: 486 SAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLS 379 S A AW P R I+A ++ +AW F H S Sbjct: 435 SVASAWLVPGRGSRIVAAVTTGEAWEWWFHVHGGSS 328
>LOC_Os01g72700:12001.t06557:unspliced-genomic ATP binding protein, putative, expressed| Length = 3456 Score = 31.8 bits (63), Expect = 6.4 Identities = 18/38 (47%), Positives = 22/38 (57%) Frame = -2 / +2 Query: 486 SAAGAWPAPSRALLILATSSSPQAWSRTFQTHSSLSTS 373 SAA APSRA L A +S+P + T T SSL+ S Sbjct: 734 SAATGSSAPSRATLACALTSAPST*APTRSTASSLTLS 847
>LOC_Os07g33310:12007.t03011:unspliced-genomic transparent testa 12 protein, putative, expressed| Length = 3216 Score = 27.2 bits (53), Expect(2) = 7.6 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -2 / +3 Query: 246 PEVARDLLRERVPRPEVPQDVRHR 175 P A LR ++P PEVP HR Sbjct: 726 PHPADLRLRRQLPHPEVPPGAEHR 797 Score = 25.8 bits (50), Expect(2) = 7.6 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = -2 / +2 Query: 468 PAPSRALLILATSSSPQAWSRTFQTHSSLSTSESP 364 P P + + ATSSSP S T + SS + S P Sbjct: 314 PPPRSSAVSSATSSSPPPPSATMASRSSPTASWYP 418
>LOC_Os03g19830:12003.t01746:unspliced-genomic hypothetical protein| Length = 465 Score = 31.3 bits (62), Expect = 8.7 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +3 / +3 Query: 609 PRRGSGHADDCPCRLVPLP 665 PRR SGH C CR +P P Sbjct: 120 PRRPSGHRAPCSCRQLPQP 176
>LOC_Os02g58790:12002.t05449:unspliced-genomic expressed protein| Length = 5825 Score = 31.3 bits (62), Expect = 8.7 Identities = 9/24 (37%), Positives = 13/24 (54%) Frame = +3 / -1 Query: 654 VPLPLHAYRDSFVSWKWNGSHPIH 725 + L +H R W+W G HP+H Sbjct: 5627 IDLSIHLSRSVIGPWQWPGVHPVH 5556
>LOC_Os01g62200:12001.t05596:unspliced-genomic expressed protein| Length = 2846 Score = 31.3 bits (62), Expect = 8.7 Identities = 13/25 (52%), Positives = 17/25 (68%) Frame = +3 / -2 Query: 732 SSTHSV*DDDAIKSNQMISQKKKKN 806 +STHS DDD + +M QK+KKN Sbjct: 493 TSTHSNDDDDVTERRRMQQQKQKKN 419
>LOC_Os11g38450:12011.t03387:unspliced-genomic hypothetical protein| Length = 3534 Score = 31.3 bits (62), Expect = 8.7 Identities = 11/36 (30%), Positives = 20/36 (55%) Frame = +1 / -2 Query: 610 QEEGLGMLMTAHAVLFLFLCMHTGTVLFHGNGMEAI 717 QE+ L + + F+ +CMHTG ++ N +A+ Sbjct: 3272 QEDSLNRAFS*RSSGFMHVCMHTGAIIASRNNFQAV 3165
>LOC_Os11g36210:12011.t03168:unspliced-genomic conserved hypothetical protein| Length = 717 Score = 31.3 bits (62), Expect = 8.7 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = -2 / +1 Query: 516 ALTWLGGSKLSAAGAWPAPSR 454 A W G + AAG WPAP R Sbjct: 334 ATGWCSGEEGEAAGCWPAPER 396
>LOC_Os11g10630:12011.t00953:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2421 Score = 31.3 bits (62), Expect = 8.7 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = -2 / +2 Query: 618 LFLGRRSLVLIWSILAAMMKSLALSPPTDGV*SWALTWLGGSKLSAAGAWPAP 460 L G L S AA+ S ALSP T + + A W G+ + A G P+P Sbjct: 401 LLAGAGLLAAARSPHAALAGSTALSPLTGVMVTTASRWWSGTLVPAVGGLPSP 559
>LOC_Os05g26210:12005.t02275:unspliced-genomic conserved hypothetical protein| Length = 714 Score = 31.3 bits (62), Expect = 8.7 Identities = 13/22 (59%), Positives = 15/22 (68%) Frame = -2 / -2 Query: 432 SSSPQAWSRTFQTHSSLSTSES 367 SSS WSRTF + SS+S S S Sbjct: 551 SSSTSCWSRTFPSSSSISISRS 486
>LOC_Os03g46270:12003.t03995:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 4262 Score = 31.3 bits (62), Expect = 8.7 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = -1 / -2 Query: 742 WVELQAWIGWLPFHFHETKLSLYACKGRGT 653 W +L +W+ L FH L+L +C+G GT Sbjct: 3496 WNDL*SWVTNLFFHIAPLPLNLPSCRGTGT 3407 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 226,989,154 Number of extensions: 3350874 Number of successful extensions: 20060 Number of sequences better than 10.0: 38 Length of query: 269 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 220 Effective length of database: 52,856,264 Effective search space: 11628378080 Effective search space used: 11628378080 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)