ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf52a14 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT828564.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN036I06, full insert sequence Length = 881 Score = 135 bits (68), Expect = 3e-28 Identities = 125/144 (86%) Strand = Plus / Plus Query: 168 ggtggtggcgatggcggacatcctgggggacttcggggcgcgggacccgttcccggagga 227 ||||||||| ||||| ||| | ||||| ||||| || ||||| ||||| ||||||||||| Sbjct: 169 ggtggtggccatggccgacctgctgggcgactttggcgcgcgcgaccccttcccggagga 228 Query: 228 gatcgcgagcaacttcggggagaagacgctgggcaacgtggacacgctgcaccgcatcct 287 ||||| |||||||||||| |||| | |||||||||||| ||||| || ||| |||||| Sbjct: 229 gatcgagagcaacttcggcgagagggtgctgggcaacgtcgacaccctccacaacatcct 288 Query: 288 catccccacgctctccgtgctctc 311 |||||||||||||||||||||||| Sbjct: 289 catccccacgctctccgtgctctc 312 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 390 agtgcgtctggaaggtccgggaccaggcctgcggcgacgagctcgtcgccaggatcaac 448 ||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 432 agtgcgtctggaaggtcagggacgaagcctgcggccacgagctcgtcgccaggatcaac 490
>dbj|AK242265.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075185M21, full insert sequence Length = 2624 Score = 135 bits (68), Expect = 3e-28 Identities = 125/144 (86%) Strand = Plus / Minus Query: 168 ggtggtggcgatggcggacatcctgggggacttcggggcgcgggacccgttcccggagga 227 ||||||||| ||||| ||| | ||||| ||||| || ||||| ||||| ||||||||||| Sbjct: 1771 ggtggtggccatggccgacctgctgggcgactttggcgcgcgcgaccccttcccggagga 1712 Query: 228 gatcgcgagcaacttcggggagaagacgctgggcaacgtggacacgctgcaccgcatcct 287 ||||| |||||||||||| |||| | |||||||||||| ||||| || ||| |||||| Sbjct: 1711 gatcgagagcaacttcggcgagagggtgctgggcaacgtcgacaccctccacaacatcct 1652 Query: 288 catccccacgctctccgtgctctc 311 |||||||||||||||||||||||| Sbjct: 1651 catccccacgctctccgtgctctc 1628 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 390 agtgcgtctggaaggtccgggaccaggcctgcggcgacgagctcgtcgcca 440 ||||||||||||||||| ||||| | ||||||||| ||||||||||||||| Sbjct: 1508 agtgcgtctggaaggtcagggacgaagcctgcggccacgagctcgtcgcca 1458
>ref|NM_001055178.1| Oryza sativa (japonica cultivar-group) Os03g0100200 (Os03g0100200) mRNA, partial cds Length = 881 Score = 135 bits (68), Expect = 3e-28 Identities = 125/144 (86%) Strand = Plus / Plus Query: 168 ggtggtggcgatggcggacatcctgggggacttcggggcgcgggacccgttcccggagga 227 ||||||||| ||||| ||| | ||||| ||||| || ||||| ||||| ||||||||||| Sbjct: 169 ggtggtggccatggccgacctgctgggcgactttggcgcgcgcgaccccttcccggagga 228 Query: 228 gatcgcgagcaacttcggggagaagacgctgggcaacgtggacacgctgcaccgcatcct 287 ||||| |||||||||||| |||| | |||||||||||| ||||| || ||| |||||| Sbjct: 229 gatcgagagcaacttcggcgagagggtgctgggcaacgtcgacaccctccacaacatcct 288 Query: 288 catccccacgctctccgtgctctc 311 |||||||||||||||||||||||| Sbjct: 289 catccccacgctctccgtgctctc 312 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 390 agtgcgtctggaaggtccgggaccaggcctgcggcgacgagctcgtcgccaggatcaac 448 ||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 432 agtgcgtctggaaggtcagggacgaagcctgcggccacgagctcgtcgccaggatcaac 490
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 135 bits (68), Expect = 3e-28 Identities = 125/144 (86%) Strand = Plus / Minus Query: 168 ggtggtggcgatggcggacatcctgggggacttcggggcgcgggacccgttcccggagga 227 ||||||||| ||||| ||| | ||||| ||||| || ||||| ||||| ||||||||||| Sbjct: 6238 ggtggtggccatggccgacctgctgggcgactttggcgcgcgcgaccccttcccggagga 6179 Query: 228 gatcgcgagcaacttcggggagaagacgctgggcaacgtggacacgctgcaccgcatcct 287 ||||| |||||||||||| |||| | |||||||||||| ||||| || ||| |||||| Sbjct: 6178 gatcgagagcaacttcggcgagagggtgctgggcaacgtcgacaccctccacaacatcct 6119 Query: 288 catccccacgctctccgtgctctc 311 |||||||||||||||||||||||| Sbjct: 6118 catccccacgctctccgtgctctc 6095 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Minus Query: 390 agtgcgtctggaaggtccgggaccaggcctgcggcgacgagctcgtcgccaggatcaac 448 ||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 5975 agtgcgtctggaaggtcagggacgaagcctgcggccacgagctcgtcgccaggatcaac 5917
>gb|AC097627.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0079B22, from chromosome 3, complete sequence Length = 125217 Score = 135 bits (68), Expect = 3e-28 Identities = 125/144 (86%) Strand = Plus / Plus Query: 168 ggtggtggcgatggcggacatcctgggggacttcggggcgcgggacccgttcccggagga 227 ||||||||| ||||| ||| | ||||| ||||| || ||||| ||||| ||||||||||| Sbjct: 118980 ggtggtggccatggccgacctgctgggcgactttggcgcgcgcgaccccttcccggagga 119039 Query: 228 gatcgcgagcaacttcggggagaagacgctgggcaacgtggacacgctgcaccgcatcct 287 ||||| |||||||||||| |||| | |||||||||||| ||||| || ||| |||||| Sbjct: 119040 gatcgagagcaacttcggcgagagggtgctgggcaacgtcgacaccctccacaacatcct 119099 Query: 288 catccccacgctctccgtgctctc 311 |||||||||||||||||||||||| Sbjct: 119100 catccccacgctctccgtgctctc 119123 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 390 agtgcgtctggaaggtccgggaccaggcctgcggcgacgagctcgtcgccaggatcaac 448 ||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 119243 agtgcgtctggaaggtcagggacgaagcctgcggccacgagctcgtcgccaggatcaac 119301
>dbj|AK104982.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-G06, full insert sequence Length = 879 Score = 135 bits (68), Expect = 3e-28 Identities = 125/144 (86%) Strand = Plus / Plus Query: 168 ggtggtggcgatggcggacatcctgggggacttcggggcgcgggacccgttcccggagga 227 ||||||||| ||||| ||| | ||||| ||||| || ||||| ||||| ||||||||||| Sbjct: 167 ggtggtggccatggccgacctgctgggcgactttggcgcgcgcgaccccttcccggagga 226 Query: 228 gatcgcgagcaacttcggggagaagacgctgggcaacgtggacacgctgcaccgcatcct 287 ||||| |||||||||||| |||| | |||||||||||| ||||| || ||| |||||| Sbjct: 227 gatcgagagcaacttcggcgagagggtgctgggcaacgtcgacaccctccacaacatcct 286 Query: 288 catccccacgctctccgtgctctc 311 |||||||||||||||||||||||| Sbjct: 287 catccccacgctctccgtgctctc 310 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 390 agtgcgtctggaaggtccgggaccaggcctgcggcgacgagctcgtcgccaggatcaac 448 ||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 430 agtgcgtctggaaggtcagggacgaagcctgcggccacgagctcgtcgccaggatcaac 488
>dbj|AK072547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131F13, full insert sequence Length = 883 Score = 135 bits (68), Expect = 3e-28 Identities = 125/144 (86%) Strand = Plus / Plus Query: 168 ggtggtggcgatggcggacatcctgggggacttcggggcgcgggacccgttcccggagga 227 ||||||||| ||||| ||| | ||||| ||||| || ||||| ||||| ||||||||||| Sbjct: 171 ggtggtggccatggccgacctgctgggcgactttggcgcgcgcgaccccttcccggagga 230 Query: 228 gatcgcgagcaacttcggggagaagacgctgggcaacgtggacacgctgcaccgcatcct 287 ||||| |||||||||||| |||| | |||||||||||| ||||| || ||| |||||| Sbjct: 231 gatcgagagcaacttcggcgagagggtgctgggcaacgtcgacaccctccacaacatcct 290 Query: 288 catccccacgctctccgtgctctc 311 |||||||||||||||||||||||| Sbjct: 291 catccccacgctctccgtgctctc 314 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 390 agtgcgtctggaaggtccgggaccaggcctgcggcgacgagctcgtcgccaggatcaac 448 ||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||||| Sbjct: 434 agtgcgtctggaaggtcagggacgaagcctgcggccacgagctcgtcgccaggatcaac 492
>gb|AC004963.2| Homo sapiens PAC clone RP5-1102A12 from 7, complete sequence Length = 173627 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 760 atgccatcaaatcaaatcaaatg 782 ||||||||||||||||||||||| Sbjct: 55632 atgccatcaaatcaaatcaaatg 55654
>emb|CU024864.5| M.truncatula DNA sequence from clone MTH2-9F11 on chromosome 3, complete sequence Length = 75871 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 763 ccatcaaatcaaatcaaatgat 784 |||||||||||||||||||||| Sbjct: 47644 ccatcaaatcaaatcaaatgat 47665
>dbj|AK242488.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J080306J10, full insert sequence Length = 504 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 448 caaggccctcgacggcgccggc 469 |||||||||||||||||||||| Sbjct: 242 caaggccctcgacggcgccggc 263
>gb|CP000468.1| Escherichia coli APEC O1, complete genome Length = 5082025 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 987224 catcgccgccaggatcgaccag 987203
>ref|NM_001052733.1| Oryza sativa (japonica cultivar-group) Os02g0197400 (Os02g0197400) mRNA, complete cds Length = 186 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 448 caaggccctcgacggcgccggc 469 |||||||||||||||||||||| Sbjct: 147 caaggccctcgacggcgccggc 168
>gb|AC174335.8| Medicago truncatula clone mth2-155l22, complete sequence Length = 87546 Score = 44.1 bits (22), Expect = 0.77 Identities = 28/30 (93%) Strand = Plus / Plus Query: 151 agaggcggtcgcgggaaggtggtggcgatg 180 ||||||||| |||||| ||||||||||||| Sbjct: 58106 agaggcggtggcgggatggtggtggcgatg 58135
>gb|CP000266.1| Shigella flexneri 5 str. 8401, complete genome Length = 4574284 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 975914 catcgccgccaggatcgaccag 975893
>gb|CP000247.1| Escherichia coli 536, complete genome Length = 4938920 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 994311 catcgccgccaggatcgaccag 994290
>gb|AC148873.2| Chlamydomonas reinhardtii clone cr-7K15, complete sequence Length = 42238 Score = 44.1 bits (22), Expect = 0.77 Identities = 28/30 (93%) Strand = Plus / Minus Query: 72 ccccgtcgccggcaagccctccgccgccgc 101 ||||||||||||| ||||| |||||||||| Sbjct: 18683 ccccgtcgccggcgagcccgccgccgccgc 18654
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 988257 catcgccgccaggatcgaccag 988236
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 968975 catcgccgccaggatcgaccag 968954
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 gccggcaagccctccgccgccg 100 |||||||||||||||||||||| Sbjct: 2502061 gccggcaagccctccgccgccg 2502082
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 gccggcaagccctccgccgccg 100 |||||||||||||||||||||| Sbjct: 2502922 gccggcaagccctccgccgccg 2502943
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 984174 catcgccgccaggatcgaccag 984153
>gb|U00096.2| Escherichia coli K12 MG1655, complete genome Length = 4639675 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 982975 catcgccgccaggatcgaccag 982954
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 1034712 catcgccgccaggatcgaccag 1034691
>gb|AC109484.2| Homo sapiens chromosome 5 clone RP11-514A16, complete sequence Length = 187174 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 767 caaatcaaatcaaatgatttct 788 |||||||||||||||||||||| Sbjct: 94203 caaatcaaatcaaatgatttct 94224
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 448 caaggccctcgacggcgccggc 469 |||||||||||||||||||||| Sbjct: 5464073 caaggccctcgacggcgccggc 5464052 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 aggccctcgacggcgccggcc 470 ||||||||||||||||||||| Sbjct: 30289812 aggccctcgacggcgccggcc 30289792
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 972944 catcgccgccaggatcgaccag 972923
>dbj|AP004191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1524_D08 Length = 143046 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 448 caaggccctcgacggcgccggc 469 |||||||||||||||||||||| Sbjct: 117654 caaggccctcgacggcgccggc 117633
>dbj|BA000007.2| Escherichia coli O157:H7 str. Sakai DNA, complete genome Length = 5498450 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 1113394 catcgccgccaggatcgaccag 1113373
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 448 caaggccctcgacggcgccggc 469 |||||||||||||||||||||| Sbjct: 8808 caaggccctcgacggcgccggc 8787
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 1202617 catcgccgccaggatcgaccag 1202596
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Plus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 2118738 catcgccgccaggatcgaccag 2118759
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 2201922 catcgccgccaggatcgaccag 2201901
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 44.1 bits (22), Expect = 0.77 Identities = 22/22 (100%) Strand = Plus / Minus Query: 565 catcgccgccaggatcgaccag 586 |||||||||||||||||||||| Sbjct: 1000897 catcgccgccaggatcgaccag 1000876
>emb|CR354547.11| Zebrafish DNA sequence from clone CH211-126G16 in linkage group 8, complete sequence Length = 175750 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 23 cccactgcaccaccatggcgctcat 47 ||||||||||||||||| ||||||| Sbjct: 95255 cccactgcaccaccatgacgctcat 95279
>emb|CU024876.6| M.truncatula DNA sequence from clone MTH2-144H1 on chromosome 3, complete sequence Length = 137872 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 765 atcaaatcaaatcaaatgatt 785 ||||||||||||||||||||| Sbjct: 65953 atcaaatcaaatcaaatgatt 65973
>emb|CT831834.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN059I20, full insert sequence Length = 721 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 415 ggcctgcggcgacgagctcgtcgcc 439 |||| |||||||||||||||||||| Sbjct: 240 ggccagcggcgacgagctcgtcgcc 264
>emb|CT831614.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN007B07, full insert sequence Length = 766 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 415 ggcctgcggcgacgagctcgtcgcc 439 |||| |||||||||||||||||||| Sbjct: 285 ggccagcggcgacgagctcgtcgcc 309
>gb|BC126412.1| Homo sapiens coiled-coil domain containing 81, mRNA (cDNA clone MGC:161690 IMAGE:8992128), complete cds Length = 2528 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 686 ttttgtttcatggaaatggaa 706 ||||||||||||||||||||| Sbjct: 700 ttttgtttcatggaaatggaa 680
>emb|CT998537.2| Pan troglodytes chromosome X clone CH251-151P12 map Xq28, complete sequence Length = 155669 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 656 tcctcttcctttgcatgcata 676 ||||||||||||||||||||| Sbjct: 126050 tcctcttcctttgcatgcata 126030
>gb|CP000473.1| Solibacter usitatus Ellin6076, complete genome Length = 9965640 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 66 cttcttccccgtcgccggcaa 86 ||||||||||||||||||||| Sbjct: 5109764 cttcttccccgtcgccggcaa 5109784
>ref|NM_001063873.1| Oryza sativa (japonica cultivar-group) Os06g0264800 (Os06g0264800) mRNA, complete cds Length = 908 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 415 ggcctgcggcgacgagctcgtcgcc 439 |||| |||||||||||||||||||| Sbjct: 288 ggccagcggcgacgagctcgtcgcc 312
>ref|NM_001054531.1| Oryza sativa (japonica cultivar-group) Os02g0727400 (Os02g0727400) mRNA, complete cds Length = 1747 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 aggccctcgacggcgccggcc 470 ||||||||||||||||||||| Sbjct: 365 aggccctcgacggcgccggcc 385
>ref|NM_001054530.1| Oryza sativa (japonica cultivar-group) Os02g0727300 (Os02g0727300) mRNA, complete cds Length = 4023 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 aggccctcgacggcgccggcc 470 ||||||||||||||||||||| Sbjct: 3500 aggccctcgacggcgccggcc 3480
>ref|XM_001216759.1| Aspergillus terreus NIH2624 predicted protein (ATEG_08138) mRNA, complete cds Length = 1998 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 454 cctcgacggcgccggccacgc 474 ||||||||||||||||||||| Sbjct: 897 cctcgacggcgccggccacgc 917
>emb|CT827814.2| Pan troglodytes chromosome X clone CH251-306B17 map Xq28, complete sequence Length = 163866 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 ggccctcgacggcgccggcca 471 ||||||||||||||||||||| Sbjct: 10172 ggccctcgacggcgccggcca 10192
>ref|XR_013586.1| PREDICTED: Macaca mulatta similar to Protein C7orf19 (LOC715014), mRNA Length = 1109 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 gcggacatcctgggggacttc 201 ||||||||||||||||||||| Sbjct: 989 gcggacatcctgggggacttc 1009
>emb|CT954340.2| Pan troglodytes chromosome X clone CH251-527M09 map Xq28, complete sequence Length = 173519 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 656 tcctcttcctttgcatgcata 676 ||||||||||||||||||||| Sbjct: 35666 tcctcttcctttgcatgcata 35646
>gb|AC159035.2| Pan troglodytes BAC clone CH251-297P8 from chromosome unknown, complete sequence Length = 207834 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 ggccctcgacggcgccggcca 471 ||||||||||||||||||||| Sbjct: 37151 ggccctcgacggcgccggcca 37171
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 544 gctgagcgccaacgacttcatcatc 568 |||||||| |||||||||||||||| Sbjct: 2384369 gctgagcgtcaacgacttcatcatc 2384393
>gb|AC148650.1| Pan troglodytes chromosome X clone PTB-044F10 map human ortholog q28, complete sequence Length = 153826 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 ggccctcgacggcgccggcca 471 ||||||||||||||||||||| Sbjct: 67278 ggccctcgacggcgccggcca 67298
>gb|U52112.2| Homo sapiens chromosome X clone QLL-D9139, Qc-7G12, Qc-7C1, Qc-12B2, Qc-12D5, QLL-A074, Qc-9D3 map q28, complete sequence Length = 181343 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 ggccctcgacggcgccggcca 471 ||||||||||||||||||||| Sbjct: 39508 ggccctcgacggcgccggcca 39528
>emb|BX957298.9| Zebrafish DNA sequence from clone CH211-268H1 in linkage group 21, complete sequence Length = 140969 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 23 cccactgcaccaccatggcgctcat 47 ||||||||||||||||| ||||||| Sbjct: 137768 cccactgcaccaccatgccgctcat 137744
>gb|AC103562.6| Homo sapiens BAC clone RP11-608O21 from 4, complete sequence Length = 147301 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 689 tgtttcatggaaatggaatgg 709 ||||||||||||||||||||| Sbjct: 53985 tgtttcatggaaatggaatgg 54005
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 415 ggcctgcggcgacgagctcgtcgcc 439 |||| |||||||||||||||||||| Sbjct: 8763128 ggccagcggcgacgagctcgtcgcc 8763104
>emb|CR925757.8| Zebrafish DNA sequence from clone CH211-208H16 in linkage group 5, complete sequence Length = 154617 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 cccactgcaccaccatggcgc 43 ||||||||||||||||||||| Sbjct: 39247 cccactgcaccaccatggcgc 39267
>gb|AC161384.4| Gallus gallus BAC clone CH261-69B2 from chromosome ul, complete sequence Length = 186366 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 ggccacgcccccgccgcgctc 487 ||||||||||||||||||||| Sbjct: 127191 ggccacgcccccgccgcgctc 127171
>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1001_B06 Length = 134810 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 415 ggcctgcggcgacgagctcgtcgcc 439 |||| |||||||||||||||||||| Sbjct: 33449 ggccagcggcgacgagctcgtcgcc 33425
>dbj|AP005284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1121A12 Length = 138796 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 aggccctcgacggcgccggcc 470 ||||||||||||||||||||| Sbjct: 90729 aggccctcgacggcgccggcc 90709
>dbj|AK120552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C13, full insert sequence Length = 3449 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 aggccctcgacggcgccggcc 470 ||||||||||||||||||||| Sbjct: 2869 aggccctcgacggcgccggcc 2849
>gb|AC093133.3| Papio anubis clone RP41-57F8, complete sequence Length = 177993 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 gcggacatcctgggggacttc 201 ||||||||||||||||||||| Sbjct: 74115 gcggacatcctgggggacttc 74135
>dbj|AK105959.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D11, full insert sequence Length = 908 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 415 ggcctgcggcgacgagctcgtcgcc 439 |||| |||||||||||||||||||| Sbjct: 288 ggccagcggcgacgagctcgtcgcc 312
>dbj|AK099532.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031L04, full insert sequence Length = 854 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 415 ggcctgcggcgacgagctcgtcgcc 439 |||| |||||||||||||||||||| Sbjct: 293 ggccagcggcgacgagctcgtcgcc 317
>dbj|AK068514.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152E08, full insert sequence Length = 1748 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 450 aggccctcgacggcgccggcc 470 ||||||||||||||||||||| Sbjct: 366 aggccctcgacggcgccggcc 386
>dbj|AK066637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071I08, full insert sequence Length = 767 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 415 ggcctgcggcgacgagctcgtcgcc 439 |||| |||||||||||||||||||| Sbjct: 289 ggccagcggcgacgagctcgtcgcc 313
>dbj|AK065834.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036J09, full insert sequence Length = 4024 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 aggccctcgacggcgccggcc 470 ||||||||||||||||||||| Sbjct: 3501 aggccctcgacggcgccggcc 3481
>dbj|AK062565.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F09, full insert sequence Length = 2083 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 aggccctcgacggcgccggcc 470 ||||||||||||||||||||| Sbjct: 1628 aggccctcgacggcgccggcc 1608
>dbj|AK060455.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-A05, full insert sequence Length = 901 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 415 ggcctgcggcgacgagctcgtcgcc 439 |||| |||||||||||||||||||| Sbjct: 295 ggccagcggcgacgagctcgtcgcc 319
>dbj|AK060172.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-G05, full insert sequence Length = 947 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 aggccctcgacggcgccggcc 470 ||||||||||||||||||||| Sbjct: 413 aggccctcgacggcgccggcc 393
>dbj|AP001148.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-762L8, complete sequences Length = 169340 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 686 ttttgtttcatggaaatggaa 706 ||||||||||||||||||||| Sbjct: 101524 ttttgtttcatggaaatggaa 101504 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 119,728,936 Number of extensions: 7266449 Number of successful extensions: 179333 Number of sequences better than 10.0: 69 Number of HSP's gapped: 179333 Number of HSP's successfully gapped: 77 Length of query: 808 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 786 Effective length of database: 18,508,616,841 Effective search space: 14547772837026 Effective search space used: 14547772837026 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
