ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf52a03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK070573:Os03g0192400 253 1e-67
2AK101759:Os01g0765300 31 1.0
3Os03g0633400:Os03g0633400 30 3.0
4AK107647: 29 3.9
5AK120106:Os01g0966000 29 5.0
6AK100238:Os03g0142500 29 5.0
7AK067542:Os01g0966000 29 5.0
8AK111430:Os03g0783100 28 6.6
9Os12g0173300:Os12g0173300 28 8.6
10Os06g0324100:Os06g0324100 28 8.6
11AK121967:Os03g0318500 28 8.6
12AK099958:Os02g0653300 28 8.6
13AK071925:Os02g0653300 28 8.6

>AK070573:Os03g0192400 |
          Length = 142
 Score =  253 bits (647), Expect = 1e-67
 Identities = 121/141 (85%), Positives = 133/141 (94%)
 Frame = +2

Query: 194 MTESMVRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPSKGPSAIALFLTTFGAFSWG 373
           MTE+ VR+KPGMASVKDMP+LQDGPPPGGFAPVRYARRIP+KGPSAIA+FLTTFGAF+WG
Sbjct: 1   MTEAWVRHKPGMASVKDMPVLQDGPPPGGFAPVRYARRIPTKGPSAIAIFLTTFGAFAWG 60

Query: 374 MYQVGQGNKVRRALKEEKIAARSAILPMLQAEEDERFVKEWKKYLEEEARIMKNVPGWKV 553
           MYQVGQGNKVRRALKEEKIAAR+A++P+LQAEEDERFVKEW K L  E  IMK+VPGWKV
Sbjct: 61  MYQVGQGNKVRRALKEEKIAARTALVPVLQAEEDERFVKEWTKSLMWEEIIMKDVPGWKV 120

Query: 554 GESVYNSGKWMPPATGELRPE 616
           G+SVYNSGKWMPPATGELR E
Sbjct: 121 GQSVYNSGKWMPPATGELRRE 141



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>AK101759:Os01g0765300 |
          Length = 598

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +3

Query: 48  PPPGSPKSLRPATNPSD 98
           PPP SP  L+PAT+PSD
Sbjct: 427 PPPNSPPPLQPATDPSD 443



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>Os03g0633400:Os03g0633400 |
          Length = 629

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 26/73 (35%), Positives = 31/73 (42%)
 Frame = +2

Query: 275 GGFAPVRYARRIPSKGPSAIALFLTTFGAFSWGMYQVGQGNKVRRALKEEKIAARSAILP 454
           GG AP       PS   S+ A   TT G    G    G+G K+RRAL  E  A  SA   
Sbjct: 36  GGPAPT------PSPSSSSGAATTTTSGGGGGG----GEGTKLRRALSFEDAATASASAT 85

Query: 455 MLQAEEDERFVKE 493
               E+  R V +
Sbjct: 86  PSSPEKKPRVVPD 98



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>AK107647: |
          Length = 318

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -3

Query: 201 SVILAPIRESHHRRGAKRPRIWCSGERPSDWERRCR*G 88
           +V  A  R   H +G++RP   C G R +  ERRCR G
Sbjct: 113 AVCRAAARAQGHIQGSRRPGA-CGGHRGARCERRCRHG 149



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>AK120106:Os01g0966000 |
          Length = 1257

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 600 PVAGGIHFPELYTLSPTFHPGTFFMILASSSRY 502
           P +GG H P++  ++P F+ G     +AS   +
Sbjct: 821 PCSGGSHLPDITVVTPVFNEGKVIFFVASRGHH 853



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>AK100238:Os03g0142500 |
          Length = 694

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 20/66 (30%), Positives = 27/66 (40%)
 Frame = +2

Query: 188 AKMTESMVRNKPGMASVKDMPLLQDGPPPGGFAPVRYARRIPSKGPSAIALFLTTFGAFS 367
           A  T   +R      +V+D P   + PPP   A  R       K PS     L++ G  S
Sbjct: 11  ALATRLCIRFPARQRAVEDAPAEDEAPPPPAAAAARAVPEEKLKSPSVSVRRLSSSG--S 68

Query: 368 WGMYQV 385
           WG  +V
Sbjct: 69  WGKKKV 74



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>AK067542:Os01g0966000 |
          Length = 1257

 Score = 28.9 bits (63), Expect = 5.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 600 PVAGGIHFPELYTLSPTFHPGTFFMILASSSRY 502
           P +GG H P++  ++P F+ G     +AS   +
Sbjct: 821 PCSGGSHLPDITVVTPVFNEGKVIFFVASRGHH 853



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>AK111430:Os03g0783100 |
          Length = 235

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 233 SVKDMPLLQDGPPPGGFAPVRYARRIPSKGPSAIALFLT 349
           +V+ +PL     PPG F  V Y +    K PS+  L LT
Sbjct: 23  AVEAVPLQPSPSPPGFFKTVSYRQAFSGKLPSSSQLLLT 61



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>Os12g0173300:Os12g0173300 |
          Length = 506

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 17/57 (29%), Positives = 28/57 (49%)
 Frame = -2

Query: 172 SPPAGGEAAADLVLRREAERLGAQMSLGLVAGRSDLGEPGGGRNRLVPVTLSASVGS 2
           S PA   AAA    +++   +GA +++  V      G  GGG  ++V  T  A+ G+
Sbjct: 43  SGPAAAAAAAAAAQQQQQTFMGA-LAITPVVAEQPQGSSGGGEKKVVAPTTPAAAGA 98



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>Os06g0324100:Os06g0324100 |
          Length = 146

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = -2

Query: 166 PAGGEAAADLVLRREAERLGAQMSLGLVAGRSDLGEPGGGRNRLVPV 26
           PA G+A A +V RRE ER  A    G + G S+  + G  R R  P+
Sbjct: 93  PAAGDAGAAVVARREKERASA---AGALHGESE--DDGAPRRRDPPL 134



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>AK121967:Os03g0318500 |
          Length = 629

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 4   CPHSLTESLERGDSSHHQVPPNRSDPPL 87
           CP +L  S+    S HH++ P+ + PP+
Sbjct: 111 CPDTLDSSVIEQSSMHHKLNPSETHPPV 138



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>AK099958:Os02g0653300 |
          Length = 145

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 115 RLGAQMSLGLVAGRSDLGEPGGGRNRLVPVTLSASV 8
           R G +    +V GR D G+  GGR RLVP  L  S+
Sbjct: 8   RRGPRRREAVVVGRDD-GDCDGGRRRLVPAPLPLSL 42



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>AK071925:Os02g0653300 |
          Length = 145

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 115 RLGAQMSLGLVAGRSDLGEPGGGRNRLVPVTLSASV 8
           R G +    +V GR D G+  GGR RLVP  L  S+
Sbjct: 8   RRGPRRREAVVVGRDD-GDCDGGRRRLVPAPLPLSL 42


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 26,258,545
Number of extensions: 628826
Number of successful extensions: 2040
Number of sequences better than 10.0: 13
Number of HSP's gapped: 2037
Number of HSP's successfully gapped: 13
Length of query: 296
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 196
Effective length of database: 11,395,755
Effective search space: 2233567980
Effective search space used: 2233567980
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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