ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf52a03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108621.1| Zea mays PCO103701 mRNA sequence Length = 548 Score = 472 bits (238), Expect = e-129 Identities = 379/426 (88%) Strand = Plus / Plus Query: 193 gatgacggagtctatggtgcggaacaagccggggatggcgagcgtcaaggacatgccgct 252 |||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||| | Sbjct: 121 gatgacggagtccctggtgcggaacaagccggggatggccagcatcaaggagatgccggt 180 Query: 253 gctgcaggacgggccgccgcccggcgggttcgcgcccgtgcgctacgcgcgccgcatccc 312 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || || Sbjct: 181 gctgcaggacgggccgccgccgggcggtttcgcgcccgtgcgctacgcgcgccggattcc 240 Query: 313 cagcaagggccccagcgccatcgcgctcttcctcaccaccttcggcgccttctcctgggg 372 || | |||||||||||||| || |||||||||| |||||||||||||| | | || Sbjct: 241 cacctcgggccccagcgccactgccatcttcctcacggccttcggcgccttcgcgtatgg 300 Query: 373 catgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaaattgc 432 ||||||||||||||| |||||||||||||| ||||| ||||| || |||||||||||||| Sbjct: 301 catgtaccaggtcggtcaggggaacaaggtgcgccgggcactcaaagaagagaaaattgc 360 Query: 433 tgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgtcaaaga 492 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgctcgtagtgctatactaccgatgctccaagctgaagaggatgaaagatttgtcaaaga 420 Query: 493 atggaagaagtatcttgaggaggaggccaggatcatgaaaaacgttcctggatggaaggt 552 |||||||||||||||||||||||||| ||||| |||||| | ||||| || |||||||| Sbjct: 421 gtggaagaagtatcttgaggaggaggcgaggattatgaaagatgttccagggtggaaggt 480 Query: 553 aggcgaaagcgtgtacaattccggaaagtggatgccccctgccaccggtgagctgcgccc 612 ||||| | |||||||||||||| || ||||||||||| | || ||||||||| ||||| Sbjct: 481 tggcgagaatgtgtacaattccgggaaatggatgcccccgggcaacggtgagctccgccc 540 Query: 613 tgaggt 618 |||||| Sbjct: 541 tgaggt 546
>gb|AY104579.1| Zea mays PCO103702 mRNA sequence Length = 956 Score = 470 bits (237), Expect = e-129 Identities = 387/437 (88%) Strand = Plus / Plus Query: 191 aagatgacggagtctatggtgcggaacaagccggggatggcgagcgtcaaggacatgccg 250 |||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||| Sbjct: 184 aagatgacggagtccctggtgcggaacaagccggggatggccagcatcaaggagatgccg 243 Query: 251 ctgctgcaggacgggccgccgcccggcgggttcgcgcccgtgcgctacgcgcgccgcatc 310 || ||||||||||||||||||| ||||| |||||||||||||||| ||| ||||| ||| Sbjct: 244 gtggtgcaggacgggccgccgccgggcggtttcgcgcccgtgcgcttcgcccgccggatc 303 Query: 311 cccagcaagggccccagcgccatcgcgctcttcctcaccaccttcggcgccttctcctgg 370 |||| | ||| |||||||||| ||| ||||||||||||||||||| || ||| | | Sbjct: 304 cccacctcggggcccagcgccaccgccatcttcctcaccaccttcggtgctttcgcatat 363 Query: 371 ggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaaatt 430 ||||||||||||||||| |||||||||||||| ||||| || || || |||||||||||| Sbjct: 364 ggcatgtaccaggtcggccaggggaacaaggtccgccgggcgctcaaagaagagaaaatt 423 Query: 431 gctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgtcaaa 490 ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 424 gctgctcgcagtgctatactgccgatgctccaagcagaagaggatgaaagatttgtcaaa 483 Query: 491 gaatggaagaagtatcttgaggaggaggccaggatcatgaaaaacgttcctggatggaag 550 || |||||||||| ||||||||||||||| |||||||||||| ||||||| || |||||| Sbjct: 484 gagtggaagaagtgtcttgaggaggaggcgaggatcatgaaagacgttccagggtggaag 543 Query: 551 gtaggcgaaagcgtgtacaattccggaaagtggatgccccctgccaccggtgagctgcgc 610 || ||||| ||||||||||| || || || ||||||||||| || || |||||||| ||| Sbjct: 544 gtcggcgagagcgtgtacaactctgggaaatggatgcccccggctactggtgagctccgc 603 Query: 611 cctgaggtttggtaagg 627 ||||||||||||||||| Sbjct: 604 cctgaggtttggtaagg 620 Score = 48.1 bits (24), Expect = 0.054 Identities = 27/28 (96%) Strand = Plus / Plus Query: 781 gaaatctggctggctaataattggacat 808 ||||||||||||| |||||||||||||| Sbjct: 722 gaaatctggctggttaataattggacat 749
>gb|DQ246130.1| Zea mays clone 22767 mRNA sequence Length = 867 Score = 462 bits (233), Expect = e-126 Identities = 383/433 (88%) Strand = Plus / Plus Query: 191 aagatgacggagtctatggtgcggaacaagccggggatggcgagcgtcaaggacatgccg 250 |||||||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||| Sbjct: 135 aagatgacggagtccctggtgcggaacaagccggggatggccagcatcaaggagatgccg 194 Query: 251 ctgctgcaggacgggccgccgcccggcgggttcgcgcccgtgcgctacgcgcgccgcatc 310 || ||||||||||||||||||| ||||| |||||||||||||||| ||| ||||| ||| Sbjct: 195 gtggtgcaggacgggccgccgccgggcggtttcgcgcccgtgcgcttcgcccgccggatc 254 Query: 311 cccagcaagggccccagcgccatcgcgctcttcctcaccaccttcggcgccttctcctgg 370 |||| | ||| |||||||||| ||| ||||||||||||||||||| || ||| | | Sbjct: 255 cccacctcggggcccagcgccaccgccatcttcctcaccaccttcggtgctttcgcatat 314 Query: 371 ggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaaatt 430 ||||||||||||||||| |||||||||||||| ||||| || || || |||||||||||| Sbjct: 315 ggcatgtaccaggtcggccaggggaacaaggtccgccgggcgctcaaagaagagaaaatt 374 Query: 431 gctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgtcaaa 490 ||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 375 gctgctcgcagtgctatactgccgatgctccaagcagaagaggatgaaagatttgtcaaa 434 Query: 491 gaatggaagaagtatcttgaggaggaggccaggatcatgaaaaacgttcctggatggaag 550 || |||||||||| ||||||||||||||| |||||||||||| | ||||| || |||||| Sbjct: 435 gagtggaagaagtgtcttgaggaggaggcgaggatcatgaaagatgttccagggtggaag 494 Query: 551 gtaggcgaaagcgtgtacaattccggaaagtggatgccccctgccaccggtgagctgcgc 610 || ||||| ||||||||||| ||||| || ||||||||||| || || |||||||| ||| Sbjct: 495 gtcggcgagagcgtgtacaactccgggaaatggatgcccccggctactggtgagctccgc 554 Query: 611 cctgaggtttggt 623 ||||||||||||| Sbjct: 555 cctgaggtttggt 567
>emb|CT832477.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA042J01, full insert sequence Length = 936 Score = 387 bits (195), Expect = e-104 Identities = 363/419 (86%) Strand = Plus / Plus Query: 191 aagatgacggagtctatggtgcggaacaagccggggatggcgagcgtcaaggacatgccg 250 |||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 163 aagatgacggaggcgtgggtgcggcacaagcccgggatggcgagcgtcaaggacatgccg 222 Query: 251 ctgctgcaggacgggccgccgcccggcgggttcgcgcccgtgcgctacgcgcgccgcatc 310 |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 223 gtgctgcaggacgggccgccgccgggcggcttcgcgcccgtgcgctacgcgcgccggatc 282 Query: 311 cccagcaagggccccagcgccatcgcgctcttcctcaccaccttcggcgccttctcctgg 370 |||| |||||| |||||||||||||| |||||||||| ||||||||||||||| ||||| Sbjct: 283 cccaccaaggggcccagcgccatcgccatcttcctcactaccttcggcgccttcgcctgg 342 Query: 371 ggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaaatt 430 || ||||||||||| || |||||||||||||| ||||| ||||| || || ||||||||| Sbjct: 343 gggatgtaccaggttggccaggggaacaaggtccgccgcgcactcaaagaggagaaaatt 402 Query: 431 gctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgtcaaa 490 |||||||| | |||| || |||| |||||||||||||||| |||||||||||||||||| Sbjct: 403 gctgcccgcactgctttagtgccagtgctccaagctgaagaagatgaaagatttgtcaaa 462 Query: 491 gaatggaagaagtatcttgaggaggaggccaggatcatgaaaaacgttcctggatggaag 550 || |||| |||| |||| | ||||| | || |||||| | || |||||||||||| Sbjct: 463 gagtggacaaagtctcttatgtgggaggaaataattatgaaagatgtccctggatggaag 522 Query: 551 gtaggcgaaagcgtgtacaattccggaaagtggatgccccctgccaccggtgagctgcg 609 || ||| |||| || || |||||||| || |||||||| ||||||||||| |||||||| Sbjct: 523 gtcggccaaagtgtctataattccgggaaatggatgcctcctgccaccggcgagctgcg 581 Score = 42.1 bits (21), Expect = 3.4 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 82 ccactaaccctagcgacatctgcgctc-ccaatcgctcggcctctcgccggag 133 ||||||||||||||| || ||||| || |||| |||||| |||||||||||| Sbjct: 47 ccactaaccctagcggcaactgcgatctccaaccgctcgatctctcgccggag 99
>ref|NM_001055774.1| Oryza sativa (japonica cultivar-group) Os03g0192400 (Os03g0192400) mRNA, complete cds Length = 929 Score = 387 bits (195), Expect = e-104 Identities = 363/419 (86%) Strand = Plus / Plus Query: 191 aagatgacggagtctatggtgcggaacaagccggggatggcgagcgtcaaggacatgccg 250 |||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 142 aagatgacggaggcgtgggtgcggcacaagcccgggatggcgagcgtcaaggacatgccg 201 Query: 251 ctgctgcaggacgggccgccgcccggcgggttcgcgcccgtgcgctacgcgcgccgcatc 310 |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 202 gtgctgcaggacgggccgccgccgggcggcttcgcgcccgtgcgctacgcgcgccggatc 261 Query: 311 cccagcaagggccccagcgccatcgcgctcttcctcaccaccttcggcgccttctcctgg 370 |||| |||||| |||||||||||||| |||||||||| ||||||||||||||| ||||| Sbjct: 262 cccaccaaggggcccagcgccatcgccatcttcctcactaccttcggcgccttcgcctgg 321 Query: 371 ggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaaatt 430 || ||||||||||| || |||||||||||||| ||||||||||| || || ||||||||| Sbjct: 322 gggatgtaccaggttggccaggggaacaaggtccgccgtgcactcaaagaggagaaaatt 381 Query: 431 gctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgtcaaa 490 |||||||| | ||| || |||| |||||||||||||||| |||||||||||||||||| Sbjct: 382 gctgcccgcaccgctttagtgccagtgctccaagctgaagaagatgaaagatttgtcaaa 441 Query: 491 gaatggaagaagtatcttgaggaggaggccaggatcatgaaaaacgttcctggatggaag 550 || |||| |||| |||| | ||||| | || |||||| | || |||||||||||| Sbjct: 442 gagtggacaaagtctcttatgtgggaggaaataattatgaaagatgtccctggatggaag 501 Query: 551 gtaggcgaaagcgtgtacaattccggaaagtggatgccccctgccaccggtgagctgcg 609 || ||| |||| || || |||||||| || |||||||| ||||||||||| |||||||| Sbjct: 502 gtcggccaaagtgtctataattccgggaaatggatgcctcctgccaccggcgagctgcg 560 Score = 42.1 bits (21), Expect = 3.4 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 82 ccactaaccctagcgacatctgcgctc-ccaatcgctcggcctctcgccggag 133 ||||||||||||||| || ||||| || |||| |||||| |||||||||||| Sbjct: 26 ccactaaccctagcggcaactgcgatctccaaccgctcgatctctcgccggag 78
>dbj|AK070573.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056B01, full insert sequence Length = 930 Score = 387 bits (195), Expect = e-104 Identities = 363/419 (86%) Strand = Plus / Plus Query: 191 aagatgacggagtctatggtgcggaacaagccggggatggcgagcgtcaaggacatgccg 250 |||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 143 aagatgacggaggcgtgggtgcggcacaagcccgggatggcgagcgtcaaggacatgccg 202 Query: 251 ctgctgcaggacgggccgccgcccggcgggttcgcgcccgtgcgctacgcgcgccgcatc 310 |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 203 gtgctgcaggacgggccgccgccgggcggcttcgcgcccgtgcgctacgcgcgccggatc 262 Query: 311 cccagcaagggccccagcgccatcgcgctcttcctcaccaccttcggcgccttctcctgg 370 |||| |||||| |||||||||||||| |||||||||| ||||||||||||||| ||||| Sbjct: 263 cccaccaaggggcccagcgccatcgccatcttcctcactaccttcggcgccttcgcctgg 322 Query: 371 ggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaaatt 430 || ||||||||||| || |||||||||||||| ||||||||||| || || ||||||||| Sbjct: 323 gggatgtaccaggttggccaggggaacaaggtccgccgtgcactcaaagaggagaaaatt 382 Query: 431 gctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgtcaaa 490 |||||||| | ||| || |||| |||||||||||||||| |||||||||||||||||| Sbjct: 383 gctgcccgcaccgctttagtgccagtgctccaagctgaagaagatgaaagatttgtcaaa 442 Query: 491 gaatggaagaagtatcttgaggaggaggccaggatcatgaaaaacgttcctggatggaag 550 || |||| |||| |||| | ||||| | || |||||| | || |||||||||||| Sbjct: 443 gagtggacaaagtctcttatgtgggaggaaataattatgaaagatgtccctggatggaag 502 Query: 551 gtaggcgaaagcgtgtacaattccggaaagtggatgccccctgccaccggtgagctgcg 609 || ||| |||| || || |||||||| || |||||||| ||||||||||| |||||||| Sbjct: 503 gtcggccaaagtgtctataattccgggaaatggatgcctcctgccaccggcgagctgcg 561 Score = 42.1 bits (21), Expect = 3.4 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 82 ccactaaccctagcgacatctgcgctc-ccaatcgctcggcctctcgccggag 133 ||||||||||||||| || ||||| || |||| |||||| |||||||||||| Sbjct: 27 ccactaaccctagcggcaactgcgatctccaaccgctcgatctctcgccggag 79
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 301 bits (152), Expect = 2e-78 Identities = 191/204 (93%) Strand = Plus / Minus Query: 58 gttcccccaaatcgctccgacccgccactaaccctagcgacatctgcgctcccaatcgct 117 ||||| ||||||||||||||||||||||||| |||||||| |||||| |||| ||||||| Sbjct: 348903 gttcctccaaatcgctccgacccgccactaagcctagcgatatctgcactccaaatcgct 348844 Query: 118 cggcctctcgccggagcaccagatccgcggccgcttcgccccccgccggtggtgagattc 177 |||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||| Sbjct: 348843 cggcctctcgccggagcaccagatccgcggccgcttcgtccccctctggtggtgagattt 348784 Query: 178 ccggatcggagccaagatgacggagtctatggtgcggaacaagccggggatggcgagcgt 237 |||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 348783 ccggatcggagccaagatgacggagtctattgtgcggaacatgccggggatggtcagcgt 348724 Query: 238 caaggacatgccgctgctgcagga 261 |||||||||||||||||||||||| Sbjct: 348723 caaggacatgccgctgctgcagga 348700 Score = 244 bits (123), Expect = 5e-61 Identities = 183/203 (90%) Strand = Plus / Minus Query: 59 ttcccccaaatcgctccgacccgccactaaccctagcgacatctgcgctcccaatcgctc 118 |||| ||||||||||||||||||||||||| |||||| | |||||| |||| ||| |||| Sbjct: 251603 ttcctccaaatcgctccgacccgccactaagcctagctatatctgcactccaaattgctc 251544 Query: 119 ggcctctcgccggagcaccagatccgcggccgcttcgccccccgccggtggtgagattcc 178 ||||||||||||||| ||||||||||||||||||||| ||||| | |||||||| ||| Sbjct: 251543 ggcctctcgccggaggaccagatccgcggccgcttcgtccccctctggtggtgatatttt 251484 Query: 179 cggatcggagccaagatgacggagtctatggtgcggaacaagccggggatggcgagcgtc 238 ||||||||||||||||||| ||| ||||| |||||||||| ||||||||||| |||||| Sbjct: 251483 cggatcggagccaagatgatggattctattgtgcggaacatgccggggatggtcagcgtc 251424 Query: 239 aaggacatgccgctgctgcagga 261 ||||||||||||||||||||||| Sbjct: 251423 aaggacatgccgctgctgcagga 251401 Score = 244 bits (123), Expect = 5e-61 Identities = 184/203 (90%), Gaps = 1/203 (0%) Strand = Plus / Minus Query: 59 ttcccccaaatcgctccgacccgccactaaccctagcgacatctgcgctcccaatcgctc 118 |||| ||||||||||||||||| |||||||||||||||| || ||| || |||||||| Sbjct: 316644 ttcctccaaatcgctccgacccaccactaaccctagcgatatatgcattca-aatcgctc 316586 Query: 119 ggcctctcgccggagcaccagatccgcggccgcttcgccccccgccggtggtgagattcc 178 ||||||||| ||||||||||||||||||||||||||| ||||| | |||||||||||| | Sbjct: 316585 ggcctctcgtcggagcaccagatccgcggccgcttcgtccccctctggtggtgagatttc 316526 Query: 179 cggatcggagccaagatgacggagtctatggtgcggaacaagccggggatggcgagcgtc 238 ||||||||| ||||||||||||||||||| |||||||||| |||||||| || ||||||| Sbjct: 316525 cggatcggaaccaagatgacggagtctattgtgcggaacatgccggggacggtgagcgtc 316466 Query: 239 aaggacatgccgctgctgcagga 261 |||||||||||| |||||||||| Sbjct: 316465 aaggacatgccgttgctgcagga 316443 Score = 212 bits (107), Expect = 2e-51 Identities = 183/207 (88%), Gaps = 6/207 (2%) Strand = Plus / Minus Query: 59 ttcccccaaatcgctccgacccgccactaaccctagcgacatctgcgctcccaatcgctc 118 |||| ||||||||||| |||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 239050 ttcctccaaatcgctctgacccgccactaaccctagcgatatctgcactccaaatcgctc 238991 Query: 119 ggcctctcgccggagcaccagatccgcggccgcttcgccccccgccggtggtgagattcc 178 ||||||||||||||||||||||||||||||||||||| |||| | |||||||||||| | Sbjct: 238990 ggcctctcgccggagcaccagatccgcggccgcttcgtgcccctctggtggtgagatttc 238931 Query: 179 cggatcggagccaagat-----ga-cggagtctatggtgcggaacaagccggggatggcg 232 | ||||||||||||| | || |||||||||| |||||||||| ||||||||||| Sbjct: 238930 cagatcggagccaaggtttctggatcggagtctattgtgcggaacatgccggggatggtc 238871 Query: 233 agcgtcaaggacatgccgctgctgcag 259 ||||||||||||||||| || |||||| Sbjct: 238870 agcgtcaaggacatgccacttctgcag 238844
>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0019D17, from chromosome 3, complete sequence Length = 129658 Score = 274 bits (138), Expect = 5e-70 Identities = 198/218 (90%) Strand = Plus / Plus Query: 191 aagatgacggagtctatggtgcggaacaagccggggatggcgagcgtcaaggacatgccg 250 |||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 43103 aagatgacggaggcgtgggtgcggcacaagcccgggatggcgagcgtcaaggacatgccg 43162 Query: 251 ctgctgcaggacgggccgccgcccggcgggttcgcgcccgtgcgctacgcgcgccgcatc 310 |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 43163 gtgctgcaggacgggccgccgccgggcggcttcgcgcccgtgcgctacgcgcgccggatc 43222 Query: 311 cccagcaagggccccagcgccatcgcgctcttcctcaccaccttcggcgccttctcctgg 370 |||| |||||| |||||||||||||| |||||||||| ||||||||||||||| ||||| Sbjct: 43223 cccaccaaggggcccagcgccatcgccatcttcctcactaccttcggcgccttcgcctgg 43282 Query: 371 ggcatgtaccaggtcggacaggggaacaaggttcgccg 408 || ||||||||||| || |||||||||||||| ||||| Sbjct: 43283 gggatgtaccaggttggccaggggaacaaggtccgccg 43320 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Plus Query: 539 cctggatggaaggtaggcgaaagcgtgtacaattccggaaagtggatgccccctgccacc 598 |||||||||||||| ||| |||| || || |||||||| || |||||||| ||||||||| Sbjct: 45091 cctggatggaaggtcggccaaagtgtctataattccgggaaatggatgcctcctgccacc 45150 Query: 599 ggtgagctgcg 609 || |||||||| Sbjct: 45151 ggcgagctgcg 45161 Score = 58.0 bits (29), Expect = 6e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 408 gtgcactgaaggaagagaaaattgctgcccgtagtgctatactgccgatgctccaagctg 467 ||||||| || || ||||||||||||||||| | ||| || |||| |||||||||||| Sbjct: 44870 gtgcactcaaagaggagaaaattgctgcccgcaccgctttagtgccagtgctccaagctg 44929 Query: 468 aagaggatgaaag 480 |||| |||||||| Sbjct: 44930 aagaagatgaaag 44942 Score = 42.1 bits (21), Expect = 3.4 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 82 ccactaaccctagcgacatctgcgctc-ccaatcgctcggcctctcgccggag 133 ||||||||||||||| || ||||| || |||| |||||| |||||||||||| Sbjct: 42987 ccactaaccctagcggcaactgcgatctccaaccgctcgatctctcgccggag 43039
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 274 bits (138), Expect = 5e-70 Identities = 198/218 (90%) Strand = Plus / Minus Query: 191 aagatgacggagtctatggtgcggaacaagccggggatggcgagcgtcaaggacatgccg 250 |||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 4792467 aagatgacggaggcgtgggtgcggcacaagcccgggatggcgagcgtcaaggacatgccg 4792408 Query: 251 ctgctgcaggacgggccgccgcccggcgggttcgcgcccgtgcgctacgcgcgccgcatc 310 |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 4792407 gtgctgcaggacgggccgccgccgggcggcttcgcgcccgtgcgctacgcgcgccggatc 4792348 Query: 311 cccagcaagggccccagcgccatcgcgctcttcctcaccaccttcggcgccttctcctgg 370 |||| |||||| |||||||||||||| |||||||||| ||||||||||||||| ||||| Sbjct: 4792347 cccaccaaggggcccagcgccatcgccatcttcctcactaccttcggcgccttcgcctgg 4792288 Query: 371 ggcatgtaccaggtcggacaggggaacaaggttcgccg 408 || ||||||||||| || |||||||||||||| ||||| Sbjct: 4792287 gggatgtaccaggttggccaggggaacaaggtccgccg 4792250 Score = 69.9 bits (35), Expect = 1e-08 Identities = 62/71 (87%) Strand = Plus / Minus Query: 539 cctggatggaaggtaggcgaaagcgtgtacaattccggaaagtggatgccccctgccacc 598 |||||||||||||| ||| |||| || || |||||||| || |||||||| ||||||||| Sbjct: 4790479 cctggatggaaggtcggccaaagtgtctataattccgggaaatggatgcctcctgccacc 4790420 Query: 599 ggtgagctgcg 609 || |||||||| Sbjct: 4790419 ggcgagctgcg 4790409 Score = 58.0 bits (29), Expect = 6e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 408 gtgcactgaaggaagagaaaattgctgcccgtagtgctatactgccgatgctccaagctg 467 ||||||| || || ||||||||||||||||| | ||| || |||| |||||||||||| Sbjct: 4790700 gtgcactcaaagaggagaaaattgctgcccgcaccgctttagtgccagtgctccaagctg 4790641 Query: 468 aagaggatgaaag 480 |||| |||||||| Sbjct: 4790640 aagaagatgaaag 4790628 Score = 42.1 bits (21), Expect = 3.4 Identities = 46/53 (86%), Gaps = 1/53 (1%) Strand = Plus / Minus Query: 82 ccactaaccctagcgacatctgcgctc-ccaatcgctcggcctctcgccggag 133 ||||||||||||||| || ||||| || |||| |||||| |||||||||||| Sbjct: 4792583 ccactaaccctagcggcaactgcgatctccaaccgctcgatctctcgccggag 4792531
>emb|AJ311660.1|GHI311660 Gossypium hirsutum mRNA for hypothetical protein (F6 gene) Length = 546 Score = 107 bits (54), Expect = 7e-20 Identities = 192/238 (80%) Strand = Plus / Plus Query: 374 atgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaaattgct 433 |||||||| |||| || ||||||||| | ||| | |||||||||||||| || ||||| Sbjct: 204 atgtaccaaatcggccaagggaacaagatccgcagggcactgaaggaagaaaagtttgct 263 Query: 434 gcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgtcaaagaa 493 || ||||| || || |||| | || ||||||||||| |||||||||||||||||||| Sbjct: 264 gcacgtagagcagtattgcctgttcttcaagctgaagaagatgaaagatttgtcaaagag 323 Query: 494 tggaagaagtatcttgaggaggaggccaggatcatgaaaaacgttcctggatggaaggta 553 |||| ||||||||| ||| | ||||| | | ||||| | || ||||| ||||| ||| Sbjct: 324 tggaggaagtatctcgagtatgaggcggaggtgatgaaggatgtccctggttggaaagta 383 Query: 554 ggcgaaagcgtgtacaattccggaaagtggatgccccctgccaccggtgagctgcgcc 611 ||||||| || |||||||| || | |||||||||||||| ||||||||||| |||| Sbjct: 384 ggcgaaaatgtatacaattctgggagatggatgccccctgcaaccggtgagctccgcc 441
>gb|AY375332.1| Gossypium barbadense fiber protein Fb20 mRNA, partial cds Length = 517 Score = 89.7 bits (45), Expect = 2e-14 Identities = 120/145 (82%) Strand = Plus / Plus Query: 479 agatttgtcaaagaatggaagaagtatcttgaggaggaggccaggatcatgaaaaacgtt 538 |||||||||||||| |||||||||||||| ||| | ||||| | |||||| | || Sbjct: 183 agatttgtcaaagagtggaagaagtatctcgagtatgaggcggaagtgatgaaagatgtc 242 Query: 539 cctggatggaaggtaggcgaaagcgtgtacaattccggaaagtggatgccccctgccacc 598 ||||| ||||| |||||||||| || |||||||| || | |||||||||||||| ||| Sbjct: 243 cctggttggaaagtaggcgaaaatgtatacaattctgggagatggatgccccctgcaacc 302 Query: 599 ggtgagctgcgccctgaggtttggt 623 |||||||| |||||||| ||||||| Sbjct: 303 ggtgagctccgccctgaagtttggt 327
>ref|NM_100342.2| Arabidopsis thaliana unknown protein (AT1G04630) mRNA, complete cds Length = 709 Score = 61.9 bits (31), Expect = 4e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 368 tggggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaa 427 ||||| |||||||||||||| ||||| ||||| | ||| | ||| |||||||||||||| Sbjct: 267 tggggaatgtaccaggtcggccagggaaacaaaatccgcagggcattgaaggaagagaaa 326 Query: 428 attgctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgt 486 |||||| ||||| | ||||| || || || ||||| ||||| |||||||| ||||| Sbjct: 327 tatgctgctcgtagaacaatacttcccattcttcaagcagaagaagatgaaaggtttgt 385 Score = 48.1 bits (24), Expect = 0.054 Identities = 57/68 (83%) Strand = Plus / Plus Query: 218 aagccggggatggcgagcgtcaaggacatgccgctgctgcaggacgggccgccgcccggc 277 ||||| || |||||||| || ||||| ||||||||||| ||||| || ||||| || || Sbjct: 117 aagccaggaatggcgagtgtgaaggatatgccgctgcttcaggatggtccgccaccgggt 176 Query: 278 gggttcgc 285 |||||||| Sbjct: 177 gggttcgc 184
>emb|BX817776.1|CNS0AEF9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZG04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 689 Score = 61.9 bits (31), Expect = 4e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 368 tggggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaa 427 ||||| |||||||||||||| ||||| ||||| | ||| | ||| |||||||||||||| Sbjct: 249 tggggaatgtaccaggtcggccagggaaacaaaatccgcagggcattgaaggaagagaaa 308 Query: 428 attgctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgt 486 |||||| ||||| | ||||| || || || ||||| ||||| |||||||| ||||| Sbjct: 309 tatgctgctcgtagaacaatacttcccattcttcaagcagaagaagatgaaaggtttgt 367 Score = 48.1 bits (24), Expect = 0.054 Identities = 57/68 (83%) Strand = Plus / Plus Query: 218 aagccggggatggcgagcgtcaaggacatgccgctgctgcaggacgggccgccgcccggc 277 ||||| || |||||||| || ||||| ||||||||||| ||||| || ||||| || || Sbjct: 99 aagccaggaatggcgagtgtgaaggatatgccgctgcttcaggatggtccgccaccgggt 158 Query: 278 gggttcgc 285 |||||||| Sbjct: 159 gggttcgc 166
>gb|DQ250794.1| Daucus carota isolate QAL-C transposon DcMaster, partial sequence Length = 857 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 482 tttgtcaaagaatggaagaagtatcttgaggaggaggccaggatcatgaa 531 ||||| |||||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 245 tttgttaaagaatggaagaaatatctggaggaggaggccagaattatgaa 294 Score = 44.1 bits (22), Expect = 0.85 Identities = 52/62 (83%) Strand = Plus / Plus Query: 416 aaggaagagaaaattgctgcccgtagtgctatactgccgatgctccaagctgaagaggat 475 |||||||| ||| |||||| || || ||||| || || ||||| ||||||||||||||| Sbjct: 93 aaggaagaaaaatatgctgctcgcagagctatcctacccatgcttcaagctgaagaggat 152 Query: 476 ga 477 || Sbjct: 153 ga 154
>gb|AY093225.1| Arabidopsis thaliana unknown protein (At1g04630) mRNA, complete cds Length = 709 Score = 54.0 bits (27), Expect = 9e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 368 tggggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaa 427 ||||| |||||||||||||| ||||| ||||| | ||| | ||| |||||||||| ||| Sbjct: 267 tggggaatgtaccaggtcggccagggaaacaaaatccgcagggcattgaaggaagaaaaa 326 Query: 428 attgctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgt 486 |||||| ||||| | ||||| || || || ||||| ||||| |||||||| ||||| Sbjct: 327 tatgctgctcgtagaacaatacttcccattcttcaagcagaagaagatgaaaggtttgt 385 Score = 48.1 bits (24), Expect = 0.054 Identities = 57/68 (83%) Strand = Plus / Plus Query: 218 aagccggggatggcgagcgtcaaggacatgccgctgctgcaggacgggccgccgcccggc 277 ||||| || |||||||| || ||||| ||||||||||| ||||| || ||||| || || Sbjct: 117 aagccaggaatggcgagtgtgaaggatatgccgctgcttcaggatggtccgccaccgggt 176 Query: 278 gggttcgc 285 |||||||| Sbjct: 177 gggttcgc 184
>emb|BX817363.1|CNS0AEFF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL18ZE01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 54.0 bits (27), Expect = 9e-04 Identities = 97/119 (81%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 368 tggggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaa 427 ||||| |||||||||||||| ||||| ||||| | ||| | ||| |||||||||||||| Sbjct: 249 tggggaatgtaccaggtcggccagggaaacaaaatccgcag-gcattgaaggaagagaaa 307 Query: 428 attgctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgt 486 |||||| ||||| | ||||| || || || ||||| ||||| |||||||| ||||| Sbjct: 308 tatgctgctcgtagaacaatacttcccattcttcaagcagaagaagatgaaaggtttgt 366 Score = 48.1 bits (24), Expect = 0.054 Identities = 57/68 (83%) Strand = Plus / Plus Query: 218 aagccggggatggcgagcgtcaaggacatgccgctgctgcaggacgggccgccgcccggc 277 ||||| || |||||||| || ||||| ||||||||||| ||||| || ||||| || || Sbjct: 99 aagccaggaatggcgagtgtgaaggatatgccgctgcttcaggatggtccgccaccgggt 158 Query: 278 gggttcgc 285 |||||||| Sbjct: 159 gggttcgc 166
>gb|BT002116.1| Arabidopsis thaliana unknown protein (At1g04630) mRNA, complete cds Length = 492 Score = 54.0 bits (27), Expect = 9e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 368 tggggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaa 427 ||||| |||||||||||||| ||||| ||||| | ||| | ||| |||||||||| ||| Sbjct: 175 tggggaatgtaccaggtcggccagggaaacaaaatccgcagggcattgaaggaagaaaaa 234 Query: 428 attgctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgt 486 |||||| ||||| | ||||| || || || ||||| ||||| |||||||| ||||| Sbjct: 235 tatgctgctcgtagaacaatacttcccattcttcaagcagaagaagatgaaaggtttgt 293 Score = 48.1 bits (24), Expect = 0.054 Identities = 57/68 (83%) Strand = Plus / Plus Query: 218 aagccggggatggcgagcgtcaaggacatgccgctgctgcaggacgggccgccgcccggc 277 ||||| || |||||||| || ||||| ||||||||||| ||||| || ||||| || || Sbjct: 25 aagccaggaatggcgagtgtgaaggatatgccgctgcttcaggatggtccgccaccgggt 84 Query: 278 gggttcgc 285 |||||||| Sbjct: 85 gggttcgc 92
>ref|NM_128881.2| Arabidopsis thaliana unknown protein (AT2G33220) mRNA, complete cds Length = 742 Score = 48.1 bits (24), Expect = 0.054 Identities = 111/140 (79%) Strand = Plus / Plus Query: 368 tggggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaa 427 |||||||||||||| || || ||||| ||||| | ||| | || ||||||||||||| Sbjct: 278 tggggcatgtaccaagttggtcagggcaacaaaatccgcagggcgttgaaggaagagaag 337 Query: 428 attgctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgtc 487 ||||| ||||| || || || ||||| || ||||||||||| |||||||| ||||| Sbjct: 338 tacgctgcacgtagagcaattctaccgattcttcaagctgaagaagatgaaaggtttgtg 397 Query: 488 aaagaatggaagaagtatct 507 || |||||||||||||| Sbjct: 398 tctgagtggaagaagtatct 417 Score = 44.1 bits (22), Expect = 0.85 Identities = 34/38 (89%) Strand = Plus / Plus Query: 536 gttcctggatggaaggtaggcgaaagcgtgtacaattc 573 |||||||||||||| || || |||| |||||||||||| Sbjct: 446 gttcctggatggaaagtcggtgaaaacgtgtacaattc 483
>gb|AY091317.1| Arabidopsis thaliana unknown protein (At2g33220) mRNA, complete cds Length = 463 Score = 48.1 bits (24), Expect = 0.054 Identities = 111/140 (79%) Strand = Plus / Plus Query: 368 tggggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaa 427 |||||||||||||| || || ||||| ||||| | ||| | || ||||||||||||| Sbjct: 175 tggggcatgtaccaagttggtcagggcaacaaaatccgcagggcgttgaaggaagagaag 234 Query: 428 attgctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgtc 487 ||||| ||||| || || || ||||| || ||||||||||| |||||||| ||||| Sbjct: 235 tacgctgcacgtagagcaattctaccgattcttcaagctgaagaagatgaaaggtttgtg 294 Query: 488 aaagaatggaagaagtatct 507 || |||||||||||||| Sbjct: 295 tctgagtggaagaagtatct 314 Score = 44.1 bits (22), Expect = 0.85 Identities = 34/38 (89%) Strand = Plus / Plus Query: 536 gttcctggatggaaggtaggcgaaagcgtgtacaattc 573 |||||||||||||| || || |||| |||||||||||| Sbjct: 343 gttcctggatggaaagtcggtgaaaacgtgtacaattc 380
>gb|AY065249.1| Arabidopsis thaliana unknown protein (At2g33220) mRNA, complete cds Length = 741 Score = 48.1 bits (24), Expect = 0.054 Identities = 111/140 (79%) Strand = Plus / Plus Query: 368 tggggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaa 427 |||||||||||||| || || ||||| ||||| | ||| | || ||||||||||||| Sbjct: 277 tggggcatgtaccaagttggtcagggcaacaaaatccgcagggcgttgaaggaagagaag 336 Query: 428 attgctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgtc 487 ||||| ||||| || || || ||||| || ||||||||||| |||||||| ||||| Sbjct: 337 tacgctgcacgtagagcaattctaccgattcttcaagctgaagaagatgaaaggtttgtg 396 Query: 488 aaagaatggaagaagtatct 507 || |||||||||||||| Sbjct: 397 tctgagtggaagaagtatct 416 Score = 44.1 bits (22), Expect = 0.85 Identities = 34/38 (89%) Strand = Plus / Plus Query: 536 gttcctggatggaaggtaggcgaaagcgtgtacaattc 573 |||||||||||||| || || |||| |||||||||||| Sbjct: 445 gttcctggatggaaagtcggtgaaaacgtgtacaattc 482
>gb|AY088795.1| Arabidopsis thaliana clone 954 mRNA, complete sequence Length = 652 Score = 48.1 bits (24), Expect = 0.054 Identities = 111/140 (79%) Strand = Plus / Plus Query: 368 tggggcatgtaccaggtcggacaggggaacaaggttcgccgtgcactgaaggaagagaaa 427 ||||| |||||||| ||||| ||||| ||||| | ||| | || |||||||||||||| Sbjct: 282 tgggggatgtaccaagtcggtcagggcaacaaaatccgcagggcgttgaaggaagagaaa 341 Query: 428 attgctgcccgtagtgctatactgccgatgctccaagctgaagaggatgaaagatttgtc 487 ||||| ||||| || || || || || || ||||||||||| |||||||| ||||| Sbjct: 342 tacgctgctcgtagagcgattctaccaattcttcaagctgaagaagatgaaaggtttgtg 401 Query: 488 aaagaatggaagaagtatct 507 || |||||||||||||| Sbjct: 402 tctgagtggaagaagtatct 421 Score = 44.1 bits (22), Expect = 0.85 Identities = 34/38 (89%) Strand = Plus / Plus Query: 536 gttcctggatggaaggtaggcgaaagcgtgtacaattc 573 |||||||||||||| || || |||| |||||||||||| Sbjct: 450 gttcctggatggaaagtcggtgaaaacgtgtacaattc 487
>dbj|AK118461.1| Arabidopsis thaliana mRNA for unknown protein, complete cds, clone: RAFL19-70-D10 Length = 1339 Score = 48.1 bits (24), Expect = 0.054 Identities = 57/68 (83%) Strand = Plus / Plus Query: 218 aagccggggatggcgagcgtcaaggacatgccgctgctgcaggacgggccgccgcccggc 277 ||||| || |||||||| || ||||| ||||||||||| ||||| || ||||| || || Sbjct: 117 aagccaggaatggcgagtgtgaaggatatgccgctgcttcaggatggtccgccaccgggt 176 Query: 278 gggttcgc 285 |||||||| Sbjct: 177 gggttcgc 184
>gb|AC002376.1|T1G11 Sequence of BAC T1G11 from Arabidopsis thaliana chromosome 1, complete sequence Length = 100079 Score = 48.1 bits (24), Expect = 0.054 Identities = 57/68 (83%) Strand = Plus / Plus Query: 218 aagccggggatggcgagcgtcaaggacatgccgctgctgcaggacgggccgccgcccggc 277 ||||| || |||||||| || ||||| ||||||||||| ||||| || ||||| || || Sbjct: 42120 aagccaggaatggcgagtgtgaaggatatgccgctgcttcaggatggtccgccaccgggt 42179 Query: 278 gggttcgc 285 |||||||| Sbjct: 42180 gggttcgc 42187
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 497 aagaagtatcttgaggaggaggc 519 ||||||||||||||||||||||| Sbjct: 730719 aagaagtatcttgaggaggaggc 730741
>ref|XM_567721.1| Cryptococcus neoformans var. neoformans JEC21 uroporphyrinogen-III synthase (CNK02510) partial mRNA Length = 900 Score = 46.1 bits (23), Expect = 0.21 Identities = 23/23 (100%) Strand = Plus / Plus Query: 497 aagaagtatcttgaggaggaggc 519 ||||||||||||||||||||||| Sbjct: 799 aagaagtatcttgaggaggaggc 821
>gb|AF106564.3| Homo sapiens chromosome 8 clone GS1-72M22 map p21.2, complete sequence Length = 143212 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 474 atgaaagatttgtcaaagaatg 495 |||||||||||||||||||||| Sbjct: 129213 atgaaagatttgtcaaagaatg 129234
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 tcccaatcgctcggcctctcgc 128 |||||||||||||||||||||| Sbjct: 1273654 tcccaatcgctcggcctctcgc 1273675
>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete sequence Length = 93158 Score = 44.1 bits (22), Expect = 0.85 Identities = 34/38 (89%) Strand = Plus / Minus Query: 536 gttcctggatggaaggtaggcgaaagcgtgtacaattc 573 |||||||||||||| || || |||| |||||||||||| Sbjct: 20620 gttcctggatggaaagtcggtgaaaacgtgtacaattc 20583
>gb|AC105359.3| Homo sapiens chromosome 8, clone XX-224N20, complete sequence Length = 122274 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 474 atgaaagatttgtcaaagaatg 495 |||||||||||||||||||||| Sbjct: 76758 atgaaagatttgtcaaagaatg 76779
>gb|AC021000.9| Homo sapiens chromosome 8, clone RP11-381I2, complete sequence Length = 192592 Score = 44.1 bits (22), Expect = 0.85 Identities = 22/22 (100%) Strand = Plus / Plus Query: 474 atgaaagatttgtcaaagaatg 495 |||||||||||||||||||||| Sbjct: 183135 atgaaagatttgtcaaagaatg 183156
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 44.1 bits (22), Expect = 0.85 Identities = 28/30 (93%) Strand = Plus / Minus Query: 247 gccgctgctgcaggacgggccgccgcccgg 276 ||||||||||||| | |||||||||||||| Sbjct: 486524 gccgctgctgcagcaggggccgccgcccgg 486495
>ref|NM_210926.1| Eremothecium gossypii AFR025Cp (AFR025C), mRNA Length = 1401 Score = 44.1 bits (22), Expect = 0.85 Identities = 28/30 (93%) Strand = Plus / Plus Query: 247 gccgctgctgcaggacgggccgccgcccgg 276 ||||||||||||| | |||||||||||||| Sbjct: 108 gccgctgctgcagcaggggccgccgcccgg 137
>gb|AE008763.1| Salmonella typhimurium LT2, section 67 of 220 of the complete genome Length = 23009 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 gtgcactgaaggaagagaaaa 428 ||||||||||||||||||||| Sbjct: 4364 gtgcactgaaggaagagaaaa 4384
>emb|CR718842.2|CNS0GHLS Tetraodon nigroviridis full-length cDNA Length = 529 Score = 42.1 bits (21), Expect = 3.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 524 atcatgaaaaacgttcctggatggaaggtaggcgaaagcgt 564 |||||||| ||||||| ||||||||||| || |||||||| Sbjct: 302 atcatgaaggacgttccgggatggaaggtcggtgaaagcgt 342
>emb|CR718462.2|CNS0GHB8 Tetraodon nigroviridis full-length cDNA Length = 519 Score = 42.1 bits (21), Expect = 3.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 524 atcatgaaaaacgttcctggatggaaggtaggcgaaagcgt 564 |||||||| ||||||| ||||||||||| || |||||||| Sbjct: 292 atcatgaaggacgttccgggatggaaggtcggtgaaagcgt 332
>gb|AC026992.12| Homo sapiens chromosome 15, clone RP11-352D13, complete sequence Length = 177902 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 415 gaaggaagagaaaattgctgc 435 ||||||||||||||||||||| Sbjct: 26886 gaaggaagagaaaattgctgc 26906
>emb|CR711659.2|CNS0GC2F Tetraodon nigroviridis full-length cDNA Length = 521 Score = 42.1 bits (21), Expect = 3.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 524 atcatgaaaaacgttcctggatggaaggtaggcgaaagcgt 564 |||||||| ||||||| ||||||||||| || |||||||| Sbjct: 294 atcatgaaggacgttccgggatggaaggtcggtgaaagcgt 334
>emb|CR710803.2|CNS0GBEN Tetraodon nigroviridis full-length cDNA Length = 531 Score = 42.1 bits (21), Expect = 3.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 524 atcatgaaaaacgttcctggatggaaggtaggcgaaagcgt 564 |||||||| ||||||| ||||||||||| || |||||||| Sbjct: 304 atcatgaaggacgttccgggatggaaggtcggtgaaagcgt 344
>emb|CR706725.2|CNS0G89D Tetraodon nigroviridis full-length cDNA Length = 547 Score = 42.1 bits (21), Expect = 3.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 524 atcatgaaaaacgttcctggatggaaggtaggcgaaagcgt 564 |||||||| ||||||| ||||||||||| || |||||||| Sbjct: 320 atcatgaaggacgttccgggatggaaggtcggtgaaagcgt 360
>emb|CR672048.2|CNS0FHIU Tetraodon nigroviridis full-length cDNA Length = 551 Score = 42.1 bits (21), Expect = 3.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 524 atcatgaaaaacgttcctggatggaaggtaggcgaaagcgt 564 |||||||| ||||||| ||||||||||| || |||||||| Sbjct: 333 atcatgaaggacgttccgggatggaaggtcggtgaaagcgt 373
>emb|CR665381.2|CNS0FCDN Tetraodon nigroviridis full-length cDNA Length = 555 Score = 42.1 bits (21), Expect = 3.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 524 atcatgaaaaacgttcctggatggaaggtaggcgaaagcgt 564 |||||||| ||||||| ||||||||||| || |||||||| Sbjct: 334 atcatgaaggacgttccgggatggaaggttggtgaaagcgt 374
>gb|AF351621.1|AF351621 Amycolatopsis orientalis glycosyltransferase GtfD (gtfD) gene, complete cds Length = 1227 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gagcaccagatccgcggccgc 151 ||||||||||||||||||||| Sbjct: 1188 gagcaccagatccgcggccgc 1168
>emb|AJ718679.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC4-23-210, cultivar Bright Yellow 2 Length = 159 Score = 42.1 bits (21), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 456 tgctccaagctgaagaggatgaaagatt 483 |||| || |||||||||||||||||||| Sbjct: 129 tgcttcangctgaagaggatgaaagatt 156
>ref|XM_740765.1| Plasmodium chabaudi chabaudi translation initiation factor-like protein (PC000542.02.0) partial mRNA Length = 3201 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 836 gtcatcatcttttatgttgat 856 ||||||||||||||||||||| Sbjct: 666 gtcatcatcttttatgttgat 646
>gb|U84350.1|AOU84350 Amycolatopsis orientalis hypothetical hydroxylases d and b genes, partial cds, hypothetical hydroxylase a, glycosyltransferases GtfD (gtfD) and GtfE (gtfE) genes, complete cds Length = 5688 Score = 42.1 bits (21), Expect = 3.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 131 gagcaccagatccgcggccgc 151 ||||||||||||||||||||| Sbjct: 3699 gagcaccagatccgcggccgc 3679 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 145,871,858 Number of extensions: 7927508 Number of successful extensions: 148558 Number of sequences better than 10.0: 45 Number of HSP's gapped: 148548 Number of HSP's successfully gapped: 74 Length of query: 890 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 868 Effective length of database: 18,508,616,841 Effective search space: 16065479417988 Effective search space used: 16065479417988 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
