| Clone Name | FLbaf49e17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001052914.1| Oryza sativa (japonica cultivar-group) Os02g0234300 (Os02g0234300) mRNA, partial cds Length = 2086 Score = 1041 bits (525), Expect = 0.0 Identities = 1244/1484 (83%), Gaps = 6/1484 (0%) Strand = Plus / Plus Query: 1 ttgagtcaagatgaggataccgacctcctgctcgtcggtggtgttctcgccttgctccgc 60 ||||| ||||| ||||| |||||||| | ||||||||| | || ||||||||||||||| Sbjct: 273 ttgagccaagaagaggacaccgacctgccgctcgtcggcagcgtcctcgccttgctccgc 332 Query: 61 tacagcctcttctcgcagttcgaccctggcaacgcaaaggctgtccggtattggccgtcg 120 ||| |||| ||| | |||||||||| ||||||| ||||| ||||| ||||||||| | Sbjct: 333 tactgcctattcgccgtgttcgaccctagcaacgcgaaggcgctccgggattggccgttg 392 Query: 121 gcggggaacttgcagcggcttccatcgtggggcggaggcggctgcgaggacacctccttc 180 |||| ||| ||||||||||| ||| ||||| || ||| |||||||||||| Sbjct: 393 tcgggcaacaggcagcggcttctctcgattggcggcgg------cgatgacacctccttc 446 Query: 181 tcggtgcccaaggagttttcctgcccgatttctttggatttgatgcgcgaccctgtggtg 240 |||||||| |||||||| || ||||| |||||| ||||||||||||| || || |||||| Sbjct: 447 tcggtgccaaaggagttctcatgcccaatttctctggatttgatgcgtgatcccgtggtg 506 Query: 241 gcgtccaccggccagacgtatgaccggccatcaatcatacagtggatcggggagggccat 300 ||||||||||| ||||||||||||||||| || |||||||||||||||| |||||||||| Sbjct: 507 gcgtccaccgggcagacgtatgaccggccgtcgatcatacagtggatcgaggagggccat 566 Query: 301 tccacctgcccaaattcagggcaggcactggcagacaaccgccttgtgcctaattgtgct 360 ||||||||||| || || || || | || ||||| |||| |||||||| || ||||| Sbjct: 567 tccacctgccccaactccggccaaacccttgcagatcaccggcttgtgccgaaccgtgct 626 Query: 361 ctccgcagtttgatttcacagtggtgcgggatgtattgtttccagtatgattccccagag 420 |||||||| ||||||||||||||||| ||| ||||| | || ||||||||||| || ||| Sbjct: 627 ctccgcagcttgatttcacagtggtgtggggtgtatggcttgcagtatgattcgcccgag 686 Query: 421 agcaacgaggggatggccgaatgcgtcgccaccgcgtgcagcagcaaggcggcaatcgag 480 ||||||||||||||||| ||||| || || | | ||||| || ||| ||||| ||| Sbjct: 687 agcaacgaggggatggcggaatgtgttgctgcatcttgcagtagtcgggctgcaatggag 746 Query: 481 gcgaataaggccacagccaggattctggtcaggatgctggtggagaggtccgatagctca 540 || || ||||||||||| |||||| ||||||||||||||| ||| |||| || | | Sbjct: 747 gcaaacaaggccacagctaggattttggtcaggatgctggaggacgggtcagaaaatgta 806 Query: 541 aaggcagttgctgccaaggaaattaggttgctggccaaggccgggaagcagaacagagct 600 |||||||| ||||| ||||||||| |||||||||| ||| |||||||||| ||| | ||| Sbjct: 807 aaggcagtcgctgctaaggaaattcggttgctggcaaagaccgggaagcaaaaccgggct 866 Query: 601 ttcattgctgagctcggtgcgatcccgttgctctgcaggttgctgctgtcctcagatcag 660 ||||| || || | |||||||| ||| |||| ||||||||||| |||| ||| | Sbjct: 867 ttcatcgccgacttgggtgcgattccgctgctttgcaggttgctcttgtcgaatgattgg 926 Query: 661 atagcacaagagaacgcagtgacagcactgctcaatctctccatctatgagccaaacaaa 720 || ||||||||||| ||||||||||| ||||||||| | || |||| ||||||||||| Sbjct: 927 atggcacaagagaatgcagtgacagcgctgctcaatttgtcaatcttcgagccaaacaag 986 Query: 721 atgcggattatggaacaggagggttgcttgtggcttatcgtcagcgtgttgcagaatggc 780 ||||||||||||||||| || |||||| ||||||||||| | || | |||||||| Sbjct: 987 ggacggattatggaacaggaaggctgcttgcggcttatcgtcggtgttctacagaatgga 1046 Query: 781 tggactacagaggccagagagaatgcagcagcaactctgttcagtctctccgtggtccat 840 |||||||| || || | |||||||| || || |||||||| ||||| || ||||||||| Sbjct: 1047 tggactacggaagcgaaggagaatgctgcggccactctgtttagtctatcagtggtccat 1106 Query: 841 gattacaagaagatgatcatgaatgagccaggggctctggagaagctggcttgtatgctg 900 ||| ||| || |||||||||||||||| |||||| | ||| |||||||| |||||||| Sbjct: 1107 aatttcaaaaaactgatcatgaatgagcctggggctgttgaggagctggctagtatgctg 1166 Query: 901 aaaaaagggactccaagagggaggaaagatgcagtgatggcacttttcaacctctcaacg 960 | || ||||| |||| |||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1167 accaaggggacatcaagggggaagaaagatgcggtgatggcactcttcaacctctcaaca 1226 Query: 961 catgcagaaagctcagctcggatgctcgagtcaagtgcagttgtagctttaatcgagtca 1020 ||| ||||||||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 1227 catccagaaagctcagctcggatgctcgagtcatgcgcagttgtagctttaattcagtcg 1286 Query: 1021 ctgaggaacgacaccgtgtcggaggaagctgctggtgctttggctctgctgatgaagcag 1080 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1287 ctgaggaatgacaccgtgtcggaggaagctgctggtgctttggccctgctgatgaagcaa 1346 Query: 1081 ccttctgttgtgcatcatgttgggagctctgaaactgtgatcagtagcctcgttggatta 1140 || || | ||||||| |||||||||||||||||||||||||| |||||| ||||| ||| Sbjct: 1347 ccatccatcgtgcatcttgttgggagctctgaaactgtgatcactagccttgttgggtta 1406 Query: 1141 atgaggcggggaactccaaagggcaaggagaatgcagtgtccgctctatacgagatatgt 1200 ||| |||||||||||||||| || ||||| |||||||| || ||| |||| ||||| ||| Sbjct: 1407 atgcggcggggaactccaaaaggtaaggaaaatgcagtctcagctttatatgagatttgt 1466 Query: 1201 cgtcgtggtggctcaacattggtgcggagagtagcaaagattccggggttgaatactgta 1260 ||||| || ||||| | ||||||| |||||||||||||||||| |||||||| || ||| Sbjct: 1467 cgtcggggcggctctgctttggtgcagagagtagcaaagattccagggttgaacacagta 1526 Query: 1261 atacagaacatcatgctcactggaacaaagcgcgccaagaagaaagcaagcttgatcgtc 1320 ||||||| ||||| |||| |||||||||||||||||||||||||||||| |||| ||| Sbjct: 1527 atacagaccatcaccctcaacggaacaaagcgcgccaagaagaaagcaagcctgattgtc 1586 Query: 1321 aagatgtgccaaagaagccaaatgccgtcagcaatgtcgctagggactagcttgagggcg 1380 ||||||||||| |||||||||||||| ||||||||| | ||||||| | |||| | Sbjct: 1587 aagatgtgccagagaagccaaatgccatcagcaatggcactagggagcacattgacagtc 1646 Query: 1381 gttgatcattctttggtaggtaacagctcattgaggcgtgctgcgagctttggcagtgga 1440 ||||||| ||| |||||||| |||| | |||| ||||||||||||||||||||||||||| Sbjct: 1647 gttgatcgttcattggtagggaacaacacattaaggcgtgctgcgagctttggcagtgga 1706 Query: 1441 gagttgtcgaaccctgtttcgatatcagtgcacgtgccctaggt 1484 || ||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 1707 gaattgtcaaacccgatttcgatatcagtgcaggtgccctaggt 1750 Score = 58.0 bits (29), Expect = 1e-04 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1539 ttctttcattgcatgctcaaaatgaaggtatacaacatttaatctaaaggaactaatact 1598 |||||||||| ||||||| || ||||||||||||| |||||||| |||||| ||||||| Sbjct: 1810 ttctttcatttcatgctccaa-tgaaggtatacaaaatttaatccaaaggatttaatact 1868 Query: 1599 tgcaatata 1607 | |||||| Sbjct: 1869 cgaaatata 1877
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 1041 bits (525), Expect = 0.0 Identities = 1244/1484 (83%), Gaps = 6/1484 (0%) Strand = Plus / Plus Query: 1 ttgagtcaagatgaggataccgacctcctgctcgtcggtggtgttctcgccttgctccgc 60 ||||| ||||| ||||| |||||||| | ||||||||| | || ||||||||||||||| Sbjct: 7612633 ttgagccaagaagaggacaccgacctgccgctcgtcggcagcgtcctcgccttgctccgc 7612692 Query: 61 tacagcctcttctcgcagttcgaccctggcaacgcaaaggctgtccggtattggccgtcg 120 ||| |||| ||| | |||||||||| ||||||| ||||| ||||| ||||||||| | Sbjct: 7612693 tactgcctattcgccgtgttcgaccctagcaacgcgaaggcgctccgggattggccgttg 7612752 Query: 121 gcggggaacttgcagcggcttccatcgtggggcggaggcggctgcgaggacacctccttc 180 |||| ||| ||||||||||| ||| ||||| || ||| |||||||||||| Sbjct: 7612753 tcgggcaacaggcagcggcttctctcgattggcggcgg------cgatgacacctccttc 7612806 Query: 181 tcggtgcccaaggagttttcctgcccgatttctttggatttgatgcgcgaccctgtggtg 240 |||||||| |||||||| || ||||| |||||| ||||||||||||| || || |||||| Sbjct: 7612807 tcggtgccaaaggagttctcatgcccaatttctctggatttgatgcgtgatcccgtggtg 7612866 Query: 241 gcgtccaccggccagacgtatgaccggccatcaatcatacagtggatcggggagggccat 300 ||||||||||| ||||||||||||||||| || |||||||||||||||| |||||||||| Sbjct: 7612867 gcgtccaccgggcagacgtatgaccggccgtcgatcatacagtggatcgaggagggccat 7612926 Query: 301 tccacctgcccaaattcagggcaggcactggcagacaaccgccttgtgcctaattgtgct 360 ||||||||||| || || || || | || ||||| |||| |||||||| || ||||| Sbjct: 7612927 tccacctgccccaactccggccaaacccttgcagatcaccggcttgtgccgaaccgtgct 7612986 Query: 361 ctccgcagtttgatttcacagtggtgcgggatgtattgtttccagtatgattccccagag 420 |||||||| ||||||||||||||||| ||| ||||| | || ||||||||||| || ||| Sbjct: 7612987 ctccgcagcttgatttcacagtggtgtggggtgtatggcttgcagtatgattcgcccgag 7613046 Query: 421 agcaacgaggggatggccgaatgcgtcgccaccgcgtgcagcagcaaggcggcaatcgag 480 ||||||||||||||||| ||||| || || | | ||||| || ||| ||||| ||| Sbjct: 7613047 agcaacgaggggatggcggaatgtgttgctgcatcttgcagtagtcgggctgcaatggag 7613106 Query: 481 gcgaataaggccacagccaggattctggtcaggatgctggtggagaggtccgatagctca 540 || || ||||||||||| |||||| ||||||||||||||| ||| |||| || | | Sbjct: 7613107 gcaaacaaggccacagctaggattttggtcaggatgctggaggacgggtcagaaaatgta 7613166 Query: 541 aaggcagttgctgccaaggaaattaggttgctggccaaggccgggaagcagaacagagct 600 |||||||| ||||| ||||||||| |||||||||| ||| |||||||||| ||| | ||| Sbjct: 7613167 aaggcagtcgctgctaaggaaattcggttgctggcaaagaccgggaagcaaaaccgggct 7613226 Query: 601 ttcattgctgagctcggtgcgatcccgttgctctgcaggttgctgctgtcctcagatcag 660 ||||| || || | |||||||| ||| |||| ||||||||||| |||| ||| | Sbjct: 7613227 ttcatcgccgacttgggtgcgattccgctgctttgcaggttgctcttgtcgaatgattgg 7613286 Query: 661 atagcacaagagaacgcagtgacagcactgctcaatctctccatctatgagccaaacaaa 720 || ||||||||||| ||||||||||| ||||||||| | || |||| ||||||||||| Sbjct: 7613287 atggcacaagagaatgcagtgacagcgctgctcaatttgtcaatcttcgagccaaacaag 7613346 Query: 721 atgcggattatggaacaggagggttgcttgtggcttatcgtcagcgtgttgcagaatggc 780 ||||||||||||||||| || |||||| ||||||||||| | || | |||||||| Sbjct: 7613347 ggacggattatggaacaggaaggctgcttgcggcttatcgtcggtgttctacagaatgga 7613406 Query: 781 tggactacagaggccagagagaatgcagcagcaactctgttcagtctctccgtggtccat 840 |||||||| || || | |||||||| || || |||||||| ||||| || ||||||||| Sbjct: 7613407 tggactacggaagcgaaggagaatgctgcggccactctgtttagtctatcagtggtccat 7613466 Query: 841 gattacaagaagatgatcatgaatgagccaggggctctggagaagctggcttgtatgctg 900 ||| ||| || |||||||||||||||| |||||| | ||| |||||||| |||||||| Sbjct: 7613467 aatttcaaaaaactgatcatgaatgagcctggggctgttgaggagctggctagtatgctg 7613526 Query: 901 aaaaaagggactccaagagggaggaaagatgcagtgatggcacttttcaacctctcaacg 960 | || ||||| |||| |||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 7613527 accaaggggacatcaagggggaagaaagatgcggtgatggcactcttcaacctctcaaca 7613586 Query: 961 catgcagaaagctcagctcggatgctcgagtcaagtgcagttgtagctttaatcgagtca 1020 ||| ||||||||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 7613587 catccagaaagctcagctcggatgctcgagtcatgcgcagttgtagctttaattcagtcg 7613646 Query: 1021 ctgaggaacgacaccgtgtcggaggaagctgctggtgctttggctctgctgatgaagcag 1080 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 7613647 ctgaggaatgacaccgtgtcggaggaagctgctggtgctttggccctgctgatgaagcaa 7613706 Query: 1081 ccttctgttgtgcatcatgttgggagctctgaaactgtgatcagtagcctcgttggatta 1140 || || | ||||||| |||||||||||||||||||||||||| |||||| ||||| ||| Sbjct: 7613707 ccatccatcgtgcatcttgttgggagctctgaaactgtgatcactagccttgttgggtta 7613766 Query: 1141 atgaggcggggaactccaaagggcaaggagaatgcagtgtccgctctatacgagatatgt 1200 ||| |||||||||||||||| || ||||| |||||||| || ||| |||| ||||| ||| Sbjct: 7613767 atgcggcggggaactccaaaaggtaaggaaaatgcagtctcagctttatatgagatttgt 7613826 Query: 1201 cgtcgtggtggctcaacattggtgcggagagtagcaaagattccggggttgaatactgta 1260 ||||| || ||||| | ||||||| |||||||||||||||||| |||||||| || ||| Sbjct: 7613827 cgtcggggcggctctgctttggtgcagagagtagcaaagattccagggttgaacacagta 7613886 Query: 1261 atacagaacatcatgctcactggaacaaagcgcgccaagaagaaagcaagcttgatcgtc 1320 ||||||| ||||| |||| |||||||||||||||||||||||||||||| |||| ||| Sbjct: 7613887 atacagaccatcaccctcaacggaacaaagcgcgccaagaagaaagcaagcctgattgtc 7613946 Query: 1321 aagatgtgccaaagaagccaaatgccgtcagcaatgtcgctagggactagcttgagggcg 1380 ||||||||||| |||||||||||||| ||||||||| | ||||||| | |||| | Sbjct: 7613947 aagatgtgccagagaagccaaatgccatcagcaatggcactagggagcacattgacagtc 7614006 Query: 1381 gttgatcattctttggtaggtaacagctcattgaggcgtgctgcgagctttggcagtgga 1440 ||||||| ||| |||||||| |||| | |||| ||||||||||||||||||||||||||| Sbjct: 7614007 gttgatcgttcattggtagggaacaacacattaaggcgtgctgcgagctttggcagtgga 7614066 Query: 1441 gagttgtcgaaccctgtttcgatatcagtgcacgtgccctaggt 1484 || ||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 7614067 gaattgtcaaacccgatttcgatatcagtgcaggtgccctaggt 7614110 Score = 58.0 bits (29), Expect = 1e-04 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1539 ttctttcattgcatgctcaaaatgaaggtatacaacatttaatctaaaggaactaatact 1598 |||||||||| ||||||| || ||||||||||||| |||||||| |||||| ||||||| Sbjct: 7614170 ttctttcatttcatgctccaa-tgaaggtatacaaaatttaatccaaaggatttaatact 7614228 Query: 1599 tgcaatata 1607 | |||||| Sbjct: 7614229 cgaaatata 7614237 Score = 44.1 bits (22), Expect = 1.6 Identities = 40/46 (86%) Strand = Plus / Minus Query: 221 tgatgcgcgaccctgtggtggcgtccaccggccagacgtatgaccg 266 ||||||||||||| ||| || ||||||||||||||| || ||||| Sbjct: 20608910 tgatgcgcgacccggtgacggtgtccaccggccagacctacgaccg 20608865
>dbj|AP004030.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_E05 Length = 101333 Score = 1041 bits (525), Expect = 0.0 Identities = 1244/1484 (83%), Gaps = 6/1484 (0%) Strand = Plus / Plus Query: 1 ttgagtcaagatgaggataccgacctcctgctcgtcggtggtgttctcgccttgctccgc 60 ||||| ||||| ||||| |||||||| | ||||||||| | || ||||||||||||||| Sbjct: 29393 ttgagccaagaagaggacaccgacctgccgctcgtcggcagcgtcctcgccttgctccgc 29452 Query: 61 tacagcctcttctcgcagttcgaccctggcaacgcaaaggctgtccggtattggccgtcg 120 ||| |||| ||| | |||||||||| ||||||| ||||| ||||| ||||||||| | Sbjct: 29453 tactgcctattcgccgtgttcgaccctagcaacgcgaaggcgctccgggattggccgttg 29512 Query: 121 gcggggaacttgcagcggcttccatcgtggggcggaggcggctgcgaggacacctccttc 180 |||| ||| ||||||||||| ||| ||||| || ||| |||||||||||| Sbjct: 29513 tcgggcaacaggcagcggcttctctcgattggcggcgg------cgatgacacctccttc 29566 Query: 181 tcggtgcccaaggagttttcctgcccgatttctttggatttgatgcgcgaccctgtggtg 240 |||||||| |||||||| || ||||| |||||| ||||||||||||| || || |||||| Sbjct: 29567 tcggtgccaaaggagttctcatgcccaatttctctggatttgatgcgtgatcccgtggtg 29626 Query: 241 gcgtccaccggccagacgtatgaccggccatcaatcatacagtggatcggggagggccat 300 ||||||||||| ||||||||||||||||| || |||||||||||||||| |||||||||| Sbjct: 29627 gcgtccaccgggcagacgtatgaccggccgtcgatcatacagtggatcgaggagggccat 29686 Query: 301 tccacctgcccaaattcagggcaggcactggcagacaaccgccttgtgcctaattgtgct 360 ||||||||||| || || || || | || ||||| |||| |||||||| || ||||| Sbjct: 29687 tccacctgccccaactccggccaaacccttgcagatcaccggcttgtgccgaaccgtgct 29746 Query: 361 ctccgcagtttgatttcacagtggtgcgggatgtattgtttccagtatgattccccagag 420 |||||||| ||||||||||||||||| ||| ||||| | || ||||||||||| || ||| Sbjct: 29747 ctccgcagcttgatttcacagtggtgtggggtgtatggcttgcagtatgattcgcccgag 29806 Query: 421 agcaacgaggggatggccgaatgcgtcgccaccgcgtgcagcagcaaggcggcaatcgag 480 ||||||||||||||||| ||||| || || | | ||||| || ||| ||||| ||| Sbjct: 29807 agcaacgaggggatggcggaatgtgttgctgcatcttgcagtagtcgggctgcaatggag 29866 Query: 481 gcgaataaggccacagccaggattctggtcaggatgctggtggagaggtccgatagctca 540 || || ||||||||||| |||||| ||||||||||||||| ||| |||| || | | Sbjct: 29867 gcaaacaaggccacagctaggattttggtcaggatgctggaggacgggtcagaaaatgta 29926 Query: 541 aaggcagttgctgccaaggaaattaggttgctggccaaggccgggaagcagaacagagct 600 |||||||| ||||| ||||||||| |||||||||| ||| |||||||||| ||| | ||| Sbjct: 29927 aaggcagtcgctgctaaggaaattcggttgctggcaaagaccgggaagcaaaaccgggct 29986 Query: 601 ttcattgctgagctcggtgcgatcccgttgctctgcaggttgctgctgtcctcagatcag 660 ||||| || || | |||||||| ||| |||| ||||||||||| |||| ||| | Sbjct: 29987 ttcatcgccgacttgggtgcgattccgctgctttgcaggttgctcttgtcgaatgattgg 30046 Query: 661 atagcacaagagaacgcagtgacagcactgctcaatctctccatctatgagccaaacaaa 720 || ||||||||||| ||||||||||| ||||||||| | || |||| ||||||||||| Sbjct: 30047 atggcacaagagaatgcagtgacagcgctgctcaatttgtcaatcttcgagccaaacaag 30106 Query: 721 atgcggattatggaacaggagggttgcttgtggcttatcgtcagcgtgttgcagaatggc 780 ||||||||||||||||| || |||||| ||||||||||| | || | |||||||| Sbjct: 30107 ggacggattatggaacaggaaggctgcttgcggcttatcgtcggtgttctacagaatgga 30166 Query: 781 tggactacagaggccagagagaatgcagcagcaactctgttcagtctctccgtggtccat 840 |||||||| || || | |||||||| || || |||||||| ||||| || ||||||||| Sbjct: 30167 tggactacggaagcgaaggagaatgctgcggccactctgtttagtctatcagtggtccat 30226 Query: 841 gattacaagaagatgatcatgaatgagccaggggctctggagaagctggcttgtatgctg 900 ||| ||| || |||||||||||||||| |||||| | ||| |||||||| |||||||| Sbjct: 30227 aatttcaaaaaactgatcatgaatgagcctggggctgttgaggagctggctagtatgctg 30286 Query: 901 aaaaaagggactccaagagggaggaaagatgcagtgatggcacttttcaacctctcaacg 960 | || ||||| |||| |||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 30287 accaaggggacatcaagggggaagaaagatgcggtgatggcactcttcaacctctcaaca 30346 Query: 961 catgcagaaagctcagctcggatgctcgagtcaagtgcagttgtagctttaatcgagtca 1020 ||| ||||||||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 30347 catccagaaagctcagctcggatgctcgagtcatgcgcagttgtagctttaattcagtcg 30406 Query: 1021 ctgaggaacgacaccgtgtcggaggaagctgctggtgctttggctctgctgatgaagcag 1080 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 30407 ctgaggaatgacaccgtgtcggaggaagctgctggtgctttggccctgctgatgaagcaa 30466 Query: 1081 ccttctgttgtgcatcatgttgggagctctgaaactgtgatcagtagcctcgttggatta 1140 || || | ||||||| |||||||||||||||||||||||||| |||||| ||||| ||| Sbjct: 30467 ccatccatcgtgcatcttgttgggagctctgaaactgtgatcactagccttgttgggtta 30526 Query: 1141 atgaggcggggaactccaaagggcaaggagaatgcagtgtccgctctatacgagatatgt 1200 ||| |||||||||||||||| || ||||| |||||||| || ||| |||| ||||| ||| Sbjct: 30527 atgcggcggggaactccaaaaggtaaggaaaatgcagtctcagctttatatgagatttgt 30586 Query: 1201 cgtcgtggtggctcaacattggtgcggagagtagcaaagattccggggttgaatactgta 1260 ||||| || ||||| | ||||||| |||||||||||||||||| |||||||| || ||| Sbjct: 30587 cgtcggggcggctctgctttggtgcagagagtagcaaagattccagggttgaacacagta 30646 Query: 1261 atacagaacatcatgctcactggaacaaagcgcgccaagaagaaagcaagcttgatcgtc 1320 ||||||| ||||| |||| |||||||||||||||||||||||||||||| |||| ||| Sbjct: 30647 atacagaccatcaccctcaacggaacaaagcgcgccaagaagaaagcaagcctgattgtc 30706 Query: 1321 aagatgtgccaaagaagccaaatgccgtcagcaatgtcgctagggactagcttgagggcg 1380 ||||||||||| |||||||||||||| ||||||||| | ||||||| | |||| | Sbjct: 30707 aagatgtgccagagaagccaaatgccatcagcaatggcactagggagcacattgacagtc 30766 Query: 1381 gttgatcattctttggtaggtaacagctcattgaggcgtgctgcgagctttggcagtgga 1440 ||||||| ||| |||||||| |||| | |||| ||||||||||||||||||||||||||| Sbjct: 30767 gttgatcgttcattggtagggaacaacacattaaggcgtgctgcgagctttggcagtgga 30826 Query: 1441 gagttgtcgaaccctgtttcgatatcagtgcacgtgccctaggt 1484 || ||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 30827 gaattgtcaaacccgatttcgatatcagtgcaggtgccctaggt 30870 Score = 58.0 bits (29), Expect = 1e-04 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1539 ttctttcattgcatgctcaaaatgaaggtatacaacatttaatctaaaggaactaatact 1598 |||||||||| ||||||| || ||||||||||||| |||||||| |||||| ||||||| Sbjct: 30930 ttctttcatttcatgctccaa-tgaaggtatacaaaatttaatccaaaggatttaatact 30988 Query: 1599 tgcaatata 1607 | |||||| Sbjct: 30989 cgaaatata 30997
>dbj|AK062592.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H03, full insert sequence Length = 2086 Score = 1041 bits (525), Expect = 0.0 Identities = 1244/1484 (83%), Gaps = 6/1484 (0%) Strand = Plus / Plus Query: 1 ttgagtcaagatgaggataccgacctcctgctcgtcggtggtgttctcgccttgctccgc 60 ||||| ||||| ||||| |||||||| | ||||||||| | || ||||||||||||||| Sbjct: 273 ttgagccaagaagaggacaccgacctgccgctcgtcggcagcgtcctcgccttgctccgc 332 Query: 61 tacagcctcttctcgcagttcgaccctggcaacgcaaaggctgtccggtattggccgtcg 120 ||| |||| ||| | |||||||||| ||||||| ||||| ||||| ||||||||| | Sbjct: 333 tactgcctattcgccgtgttcgaccctagcaacgcgaaggcgctccgggattggccgttg 392 Query: 121 gcggggaacttgcagcggcttccatcgtggggcggaggcggctgcgaggacacctccttc 180 |||| ||| ||||||||||| ||| ||||| || ||| |||||||||||| Sbjct: 393 tcgggcaacaggcagcggcttctctcgattggcggcgg------cgatgacacctccttc 446 Query: 181 tcggtgcccaaggagttttcctgcccgatttctttggatttgatgcgcgaccctgtggtg 240 |||||||| |||||||| || ||||| |||||| ||||||||||||| || || |||||| Sbjct: 447 tcggtgccaaaggagttctcatgcccaatttctctggatttgatgcgtgatcccgtggtg 506 Query: 241 gcgtccaccggccagacgtatgaccggccatcaatcatacagtggatcggggagggccat 300 ||||||||||| ||||||||||||||||| || |||||||||||||||| |||||||||| Sbjct: 507 gcgtccaccgggcagacgtatgaccggccgtcgatcatacagtggatcgaggagggccat 566 Query: 301 tccacctgcccaaattcagggcaggcactggcagacaaccgccttgtgcctaattgtgct 360 ||||||||||| || || || || | || ||||| |||| |||||||| || ||||| Sbjct: 567 tccacctgccccaactccggccaaacccttgcagatcaccggcttgtgccgaaccgtgct 626 Query: 361 ctccgcagtttgatttcacagtggtgcgggatgtattgtttccagtatgattccccagag 420 |||||||| ||||||||||||||||| ||| ||||| | || ||||||||||| || ||| Sbjct: 627 ctccgcagcttgatttcacagtggtgtggggtgtatggcttgcagtatgattcgcccgag 686 Query: 421 agcaacgaggggatggccgaatgcgtcgccaccgcgtgcagcagcaaggcggcaatcgag 480 ||||||||||||||||| ||||| || || | | ||||| || ||| ||||| ||| Sbjct: 687 agcaacgaggggatggcggaatgtgttgctgcatcttgcagtagtcgggctgcaatggag 746 Query: 481 gcgaataaggccacagccaggattctggtcaggatgctggtggagaggtccgatagctca 540 || || ||||||||||| |||||| ||||||||||||||| ||| |||| || | | Sbjct: 747 gcaaacaaggccacagctaggattttggtcaggatgctggaggacgggtcagaaaatgta 806 Query: 541 aaggcagttgctgccaaggaaattaggttgctggccaaggccgggaagcagaacagagct 600 |||||||| ||||| ||||||||| |||||||||| ||| |||||||||| ||| | ||| Sbjct: 807 aaggcagtcgctgctaaggaaattcggttgctggcaaagaccgggaagcaaaaccgggct 866 Query: 601 ttcattgctgagctcggtgcgatcccgttgctctgcaggttgctgctgtcctcagatcag 660 ||||| || || | |||||||| ||| |||| ||||||||||| |||| ||| | Sbjct: 867 ttcatcgccgacttgggtgcgattccgctgctttgcaggttgctcttgtcgaatgattgg 926 Query: 661 atagcacaagagaacgcagtgacagcactgctcaatctctccatctatgagccaaacaaa 720 || ||||||||||| ||||||||||| ||||||||| | || |||| ||||||||||| Sbjct: 927 atggcacaagagaatgcagtgacagcgctgctcaatttgtcaatcttcgagccaaacaag 986 Query: 721 atgcggattatggaacaggagggttgcttgtggcttatcgtcagcgtgttgcagaatggc 780 ||||||||||||||||| || |||||| ||||||||||| | || | |||||||| Sbjct: 987 ggacggattatggaacaggaaggctgcttgcggcttatcgtcggtgttctacagaatgga 1046 Query: 781 tggactacagaggccagagagaatgcagcagcaactctgttcagtctctccgtggtccat 840 |||||||| || || | |||||||| || || |||||||| ||||| || ||||||||| Sbjct: 1047 tggactacggaagcgaaggagaatgctgcggccactctgtttagtctatcagtggtccat 1106 Query: 841 gattacaagaagatgatcatgaatgagccaggggctctggagaagctggcttgtatgctg 900 ||| ||| || |||||||||||||||| |||||| | ||| |||||||| |||||||| Sbjct: 1107 aatttcaaaaaactgatcatgaatgagcctggggctgttgaggagctggctagtatgctg 1166 Query: 901 aaaaaagggactccaagagggaggaaagatgcagtgatggcacttttcaacctctcaacg 960 | || ||||| |||| |||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 1167 accaaggggacatcaagggggaagaaagatgcggtgatggcactcttcaacctctcaaca 1226 Query: 961 catgcagaaagctcagctcggatgctcgagtcaagtgcagttgtagctttaatcgagtca 1020 ||| ||||||||||||||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 1227 catccagaaagctcagctcggatgctcgagtcatgcgcagttgtagctttaattcagtcg 1286 Query: 1021 ctgaggaacgacaccgtgtcggaggaagctgctggtgctttggctctgctgatgaagcag 1080 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1287 ctgaggaatgacaccgtgtcggaggaagctgctggtgctttggccctgctgatgaagcaa 1346 Query: 1081 ccttctgttgtgcatcatgttgggagctctgaaactgtgatcagtagcctcgttggatta 1140 || || | ||||||| |||||||||||||||||||||||||| |||||| ||||| ||| Sbjct: 1347 ccatccatcgtgcatcttgttgggagctctgaaactgtgatcactagccttgttgggtta 1406 Query: 1141 atgaggcggggaactccaaagggcaaggagaatgcagtgtccgctctatacgagatatgt 1200 ||| |||||||||||||||| || ||||| |||||||| || ||| |||| ||||| ||| Sbjct: 1407 atgcggcggggaactccaaaaggtaaggaaaatgcagtctcagctttatatgagatttgt 1466 Query: 1201 cgtcgtggtggctcaacattggtgcggagagtagcaaagattccggggttgaatactgta 1260 ||||| || ||||| | ||||||| |||||||||||||||||| |||||||| || ||| Sbjct: 1467 cgtcggggcggctctgctttggtgcagagagtagcaaagattccagggttgaacacagta 1526 Query: 1261 atacagaacatcatgctcactggaacaaagcgcgccaagaagaaagcaagcttgatcgtc 1320 ||||||| ||||| |||| |||||||||||||||||||||||||||||| |||| ||| Sbjct: 1527 atacagaccatcaccctcaacggaacaaagcgcgccaagaagaaagcaagcctgattgtc 1586 Query: 1321 aagatgtgccaaagaagccaaatgccgtcagcaatgtcgctagggactagcttgagggcg 1380 ||||||||||| |||||||||||||| ||||||||| | ||||||| | |||| | Sbjct: 1587 aagatgtgccagagaagccaaatgccatcagcaatggcactagggagcacattgacagtc 1646 Query: 1381 gttgatcattctttggtaggtaacagctcattgaggcgtgctgcgagctttggcagtgga 1440 ||||||| ||| |||||||| |||| | |||| ||||||||||||||||||||||||||| Sbjct: 1647 gttgatcgttcattggtagggaacaacacattaaggcgtgctgcgagctttggcagtgga 1706 Query: 1441 gagttgtcgaaccctgtttcgatatcagtgcacgtgccctaggt 1484 || ||||| ||||| |||||||||||||||| ||||||||||| Sbjct: 1707 gaattgtcaaacccgatttcgatatcagtgcaggtgccctaggt 1750 Score = 58.0 bits (29), Expect = 1e-04 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Plus Query: 1539 ttctttcattgcatgctcaaaatgaaggtatacaacatttaatctaaaggaactaatact 1598 |||||||||| ||||||| || ||||||||||||| |||||||| |||||| ||||||| Sbjct: 1810 ttctttcatttcatgctccaa-tgaaggtatacaaaatttaatccaaaggatttaatact 1868 Query: 1599 tgcaatata 1607 | |||||| Sbjct: 1869 cgaaatata 1877
>gb|AC167364.3| Mus musculus BAC clone RP23-41J3 from chromosome 12, complete sequence Length = 204336 Score = 48.1 bits (24), Expect = 0.11 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1612 cacatgtgcatgtgtctgtgtatgggaa 1639 ||||||||||||||| |||||||||||| Sbjct: 198679 cacatgtgcatgtgtttgtgtatgggaa 198652
>gb|AC167360.3| Mus musculus BAC clone RP24-174G8 from chromosome 12, complete sequence Length = 171120 Score = 48.1 bits (24), Expect = 0.11 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1612 cacatgtgcatgtgtctgtgtatgggaa 1639 ||||||||||||||| |||||||||||| Sbjct: 124013 cacatgtgcatgtgtttgtgtatgggaa 123986
>gb|AC121311.16| Mus musculus chromosome 3, clone RP24-317L5, complete sequence Length = 221261 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Minus Query: 1611 tcacatgtgcatgtgtctgtgtat 1634 |||||||||||||||||||||||| Sbjct: 31722 tcacatgtgcatgtgtctgtgtat 31699
>gb|AC166371.4| Mus musculus BAC clone CH25-488C17 from chromosome 12, complete sequence Length = 117908 Score = 48.1 bits (24), Expect = 0.11 Identities = 27/28 (96%) Strand = Plus / Minus Query: 1612 cacatgtgcatgtgtctgtgtatgggaa 1639 ||||||||||||||| |||||||||||| Sbjct: 78921 cacatgtgcatgtgtttgtgtatgggaa 78894
>gb|AC097273.3| Genomic sequence for Mus musculus, clone RP23-118N13, complete sequence Length = 211657 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1613 acatgtgcatgtgtctgtgtatg 1635 ||||||||||||||||||||||| Sbjct: 182466 acatgtgcatgtgtctgtgtatg 182488
>gb|AC157514.2| Mus musculus BAC clone RP24-281C16 from chromosome 9, complete sequence Length = 191880 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1613 acatgtgcatgtgtctgtgtatg 1635 ||||||||||||||||||||||| Sbjct: 119882 acatgtgcatgtgtctgtgtatg 119860
>emb|AL928598.7| Mouse DNA sequence from clone RP23-326I20 on chromosome 2, complete sequence Length = 148583 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 918 agggaggaaagatgcagtgatgg 940 ||||||||||||||||||||||| Sbjct: 31556 agggaggaaagatgcagtgatgg 31578
>emb|CT828998.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA112E04, full insert sequence Length = 1399 Score = 44.1 bits (22), Expect = 1.6 Identities = 40/46 (86%) Strand = Plus / Plus Query: 221 tgatgcgcgaccctgtggtggcgtccaccggccagacgtatgaccg 266 ||||||||||||| ||| || ||||||||||||||| || ||||| Sbjct: 172 tgatgcgcgacccggtgacggtgtccaccggccagacctacgaccg 217
>ref|NM_001053620.1| Oryza sativa (japonica cultivar-group) Os02g0548700 (Os02g0548700) mRNA, complete cds Length = 1248 Score = 44.1 bits (22), Expect = 1.6 Identities = 40/46 (86%) Strand = Plus / Plus Query: 221 tgatgcgcgaccctgtggtggcgtccaccggccagacgtatgaccg 266 ||||||||||||| ||| || ||||||||||||||| || ||||| Sbjct: 89 tgatgcgcgacccggtgacggtgtccaccggccagacctacgaccg 134
>emb|CR339045.13| Zebrafish DNA sequence from clone CH211-248G22 in linkage group 7, complete sequence Length = 78342 Score = 44.1 bits (22), Expect = 1.6 Identities = 28/30 (93%) Strand = Plus / Plus Query: 875 ctctggagaagctggcttgtatgctgaaaa 904 ||||| |||| ||||||||||||||||||| Sbjct: 57187 ctctgaagaatctggcttgtatgctgaaaa 57216
>gb|DQ226970.1| Boechera divaricarpa isolate AD-26SProt mRNA sequence Length = 501 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 93 gccaagaagaaagcaagcttga 72
>gb|DQ226751.1| Boechera divaricarpa isolate SLW-A-E11 mRNA sequence Length = 501 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 93 gccaagaagaaagcaagcttga 72
>ref|NM_100781.3| Arabidopsis thaliana ATPase/ calmodulin binding (AT1G09100) mRNA, complete cds Length = 1474 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 1293 gccaagaagaaagcaagcttga 1314
>ref|NM_111426.2| Arabidopsis thaliana RPT5A; ATPase/ calmodulin binding (RPT5A) mRNA, complete cds Length = 1621 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 1348 gccaagaagaaagcaagcttga 1369
>gb|AC125407.4| Mus musculus BAC clone RP23-94F17 from chromosome 5, complete sequence Length = 233082 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1616 tgtgcatgtgtctgtgtatggg 1637 |||||||||||||||||||||| Sbjct: 173440 tgtgcatgtgtctgtgtatggg 173461
>gb|AC151980.3| Mus musculus BAC clone RP24-83M3 from chromosome 8, complete sequence Length = 253457 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 707 atgagccaaacaaaatgcggat 728 |||||||||||||||||||||| Sbjct: 48692 atgagccaaacaaaatgcggat 48713
>gb|AC131756.3| Mus musculus BAC clone RP24-199J23 from chromosome 19, complete sequence Length = 175604 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1612 cacatgtgcatgtgtctgtgtatggg 1637 ||||||||||||||||||||| |||| Sbjct: 122200 cacatgtgcatgtgtctgtgtgtggg 122225
>gb|AC114821.4| Mus musculus BAC clone RP23-72K1 from chromosome 1, complete sequence Length = 197978 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1614 catgtgcatgtgtctgtgtatg 1635 |||||||||||||||||||||| Sbjct: 13391 catgtgcatgtgtctgtgtatg 13370 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1614 catgtgcatgtgtctgtgtatg 1635 |||||||||||||||||||||| Sbjct: 13719 catgtgcatgtgtctgtgtatg 13698 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1614 catgtgcatgtgtctgtgtatg 1635 |||||||||||||||||||||| Sbjct: 13871 catgtgcatgtgtctgtgtatg 13850
>gb|AC122000.3| Mus musculus BAC clone RP24-328N20 from chromosome 16, complete sequence Length = 188993 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1613 acatgtgcatgtgtctgtgtat 1634 |||||||||||||||||||||| Sbjct: 125309 acatgtgcatgtgtctgtgtat 125288
>gb|AC122420.4| Mus musculus BAC clone RP24-167C5 from chromosome 8, complete sequence Length = 179058 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 707 atgagccaaacaaaatgcggat 728 |||||||||||||||||||||| Sbjct: 139745 atgagccaaacaaaatgcggat 139766
>gb|AC009606.4|ATAC009606 Arabidopsis thaliana chromosome III BAC F22F7 genomic sequence, complete sequence Length = 91924 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 14885 gccaagaagaaagcaagcttga 14864
>gb|AC120544.9| Mus musculus chromosome 1, clone RP23-299N6, complete sequence Length = 223752 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1614 catgtgcatgtgtctgtgtatg 1635 |||||||||||||||||||||| Sbjct: 115980 catgtgcatgtgtctgtgtatg 116001
>gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, complete sequence Length = 230597 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1614 catgtgcatgtgtctgtgtatg 1635 |||||||||||||||||||||| Sbjct: 206471 catgtgcatgtgtctgtgtatg 206492
>gb|BT000140.1| Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT5a (At3g05530) mRNA, complete cds Length = 1351 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 1240 gccaagaagaaagcaagcttga 1261
>gb|AY124813.1| Arabidopsis thaliana At1g09100/F7G19_2 mRNA, complete cds Length = 1272 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 1237 gccaagaagaaagcaagcttga 1258
>gb|AC098976.2| Homo sapiens BAC clone RP11-751L19 from 4, complete sequence Length = 165221 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 589 cagaacagagctttcattgctg 610 |||||||||||||||||||||| Sbjct: 53253 cagaacagagctttcattgctg 53274
>emb|AL450327.12| Human DNA sequence from clone RP11-173D14 on chromosome 6 Contains part of a novel gene, a gene for a novel protein (likely ortholog of mouse putative IKK regulator SIMPL), the 3'end of a gene for a novel WD repeat-containing protein and a CpG island, complete sequence Length = 174304 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 907 gggactccaagagggaggaaag 928 |||||||||||||||||||||| Sbjct: 4192 gggactccaagagggaggaaag 4171
>gb|AY062705.1| Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT5a (At3g05530; F22F7.1) mRNA, complete cds Length = 1520 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 1347 gccaagaagaaagcaagcttga 1368
>gb|AF412095.1|AF412095 Arabidopsis thaliana At1g09100/F7G19_2 mRNA, complete cds Length = 1448 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 1266 gccaagaagaaagcaagcttga 1287
>gb|AY050423.1| Arabidopsis thaliana At1g09100/F7G19_2 mRNA, complete cds Length = 1415 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 1266 gccaagaagaaagcaagcttga 1287
>gb|BC049356.1| Mus musculus, clone IMAGE:6391877, mRNA Length = 1692 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1612 cacatgtgcatgtgtctgtgtatggg 1637 ||||||||||||||||||||| |||| Sbjct: 1128 cacatgtgcatgtgtctgtgtgtggg 1153
>gb|AC007338.6| Homo sapiens chromosome 16 clone RP11-283C7, complete sequence Length = 185281 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1611 tcacatgtgcatgtgtctgtgt 1632 |||||||||||||||||||||| Sbjct: 180717 tcacatgtgcatgtgtctgtgt 180738
>gb|AC018845.7| Homo sapiens chromosome 16 clone RP11-169E6, complete sequence Length = 176184 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1611 tcacatgtgcatgtgtctgtgt 1632 |||||||||||||||||||||| Sbjct: 56035 tcacatgtgcatgtgtctgtgt 56014
>gb|AC025164.37| Homo sapiens 12 BAC RP11-796E2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216841 Score = 44.1 bits (22), Expect = 1.6 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1610 atcacatgtgcatgtgtctgtgtatg 1635 ||||||||||||||||| |||||||| Sbjct: 12081 atcacatgtgcatgtgtgtgtgtatg 12106
>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0051E21 Length = 137959 Score = 44.1 bits (22), Expect = 1.6 Identities = 40/46 (86%) Strand = Plus / Minus Query: 221 tgatgcgcgaccctgtggtggcgtccaccggccagacgtatgaccg 266 ||||||||||||| ||| || ||||||||||||||| || ||||| Sbjct: 104468 tgatgcgcgacccggtgacggtgtccaccggccagacctacgaccg 104423
>dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0040I22 Length = 134273 Score = 44.1 bits (22), Expect = 1.6 Identities = 40/46 (86%) Strand = Plus / Minus Query: 221 tgatgcgcgaccctgtggtggcgtccaccggccagacgtatgaccg 266 ||||||||||||| ||| || ||||||||||||||| || ||||| Sbjct: 5765 tgatgcgcgacccggtgacggtgtccaccggccagacctacgaccg 5720
>emb|AL928617.13| Mouse DNA sequence from clone RP23-326E21 on chromosome 2, complete sequence Length = 190652 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 639 gttgctgctgtcctcagatcag 660 |||||||||||||||||||||| Sbjct: 114958 gttgctgctgtcctcagatcag 114979
>emb|BX815750.1|CNS0AAOB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS90ZA12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1426 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 1293 gccaagaagaaagcaagcttga 1314
>emb|BX823732.1|CNS0A5FH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZC12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1467 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 1315 gccaagaagaaagcaagcttga 1336
>emb|BX823750.1|CNS0A4NL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS72ZA09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1457 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 1340 gccaagaagaaagcaagcttga 1361
>gb|AF123394.1|AF123394 Arabidopsis thaliana 26S proteasome AAA-ATPase subunit RPT5a (RPT5a) mRNA, complete cds Length = 1390 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 1276 gccaagaagaaagcaagcttga 1297
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 435 ggccgaatgcgtcgccaccgcg 456 |||||||||||||||||||||| Sbjct: 1967384 ggccgaatgcgtcgccaccgcg 1967363
>gb|AF081573.1|AF081573 Arabidopsis thaliana 19S proteasome regulatory complex subunit S6A mRNA, complete cds Length = 1275 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 1240 gccaagaagaaagcaagcttga 1261
>gb|AC140553.3| Mus musculus BAC clone RP24-71M17 from 1, complete sequence Length = 217538 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1614 catgtgcatgtgtctgtgtatg 1635 |||||||||||||||||||||| Sbjct: 134317 catgtgcatgtgtctgtgtatg 134296 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1614 catgtgcatgtgtctgtgtatg 1635 |||||||||||||||||||||| Sbjct: 134645 catgtgcatgtgtctgtgtatg 134624 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1614 catgtgcatgtgtctgtgtatg 1635 |||||||||||||||||||||| Sbjct: 134797 catgtgcatgtgtctgtgtatg 134776
>gb|AC154293.1| Mus musculus BAC clone RP24-490O21 from 16, complete sequence Length = 141907 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1613 acatgtgcatgtgtctgtgtat 1634 |||||||||||||||||||||| Sbjct: 127076 acatgtgcatgtgtctgtgtat 127097
>gb|AC000106.1|F7G19 Sequence of BAC F7G19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 110514 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 6478 gccaagaagaaagcaagcttga 6499
>dbj|D88663.1| Brassica campestris mRNA for Tat binding protein 1, complete cds Length = 1433 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 1299 gccaagaagaaagcaagcttga 1320
>dbj|D78490.1| Brassica rapa mRNA for human immunodeficiency virus Tat binding protein 1, partial cds Length = 308 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1294 gccaagaagaaagcaagcttga 1315 |||||||||||||||||||||| Sbjct: 174 gccaagaagaaagcaagcttga 195
>ref|XM_001024663.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00615930) mRNA, complete cds Length = 1056 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1388 attctttggtaggtaacagctcatt 1412 |||||||||||||| |||||||||| Sbjct: 623 attctttggtaggtgacagctcatt 647
>gb|AC188437.4| Pan troglodytes BAC clone CH251-721F7 from chromosome 7, complete sequence Length = 200311 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 843 ttacaagaagatgatcatgaa 863 ||||||||||||||||||||| Sbjct: 93561 ttacaagaagatgatcatgaa 93581
>ref|XM_001157525.1| PREDICTED: Pan troglodytes PAS domain containing serine/threonine kinase, transcript variant 6 (PASK), mRNA Length = 8248 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1614 catgtgcatgtgtctgtgtat 1634 ||||||||||||||||||||| Sbjct: 6939 catgtgcatgtgtctgtgtat 6919
>ref|XM_001157584.1| PREDICTED: Pan troglodytes PAS domain containing serine/threonine kinase, transcript variant 7 (PASK), mRNA Length = 8673 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1614 catgtgcatgtgtctgtgtat 1634 ||||||||||||||||||||| Sbjct: 7364 catgtgcatgtgtctgtgtat 7344
>ref|XM_001133002.1| PREDICTED: Homo sapiens hypothetical protein LOC728804 (LOC728804), mRNA Length = 4812 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 aggccacagccaggattctgg 508 ||||||||||||||||||||| Sbjct: 2542 aggccacagccaggattctgg 2562
>ref|XM_940984.2| PREDICTED: Homo sapiens sushi, nidogen and EGF-like domains 1 (SNED1), mRNA Length = 6714 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1614 catgtgcatgtgtctgtgtat 1634 ||||||||||||||||||||| Sbjct: 5548 catgtgcatgtgtctgtgtat 5568
>ref|XM_059482.8| PREDICTED: Homo sapiens sushi, nidogen and EGF-like domains 1 (SNED1), mRNA Length = 6834 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1614 catgtgcatgtgtctgtgtat 1634 ||||||||||||||||||||| Sbjct: 5668 catgtgcatgtgtctgtgtat 5688
>ref|XR_013636.1| PREDICTED: Macaca mulatta similar to secreted nidogen domain protein (LOC717458), mRNA Length = 5939 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1614 catgtgcatgtgtctgtgtat 1634 ||||||||||||||||||||| Sbjct: 5511 catgtgcatgtgtctgtgtat 5531
>gb|AC116384.9| Mus musculus chromosome 3, clone RP23-20L19, complete sequence Length = 203580 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1618 tgcatgtgtctgtgtatggga 1638 ||||||||||||||||||||| Sbjct: 149708 tgcatgtgtctgtgtatggga 149728
>gb|AC132404.5| Mus musculus BAC clone RP23-328O21 from chromosome 17, complete sequence Length = 207685 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1615 atgtgcatgtgtctgtgtatg 1635 ||||||||||||||||||||| Sbjct: 148848 atgtgcatgtgtctgtgtatg 148868
>ref|XM_505843.1| Yarrowia lipolytica CLIB122, YALI0F24783g predicted mRNA Length = 3519 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 628 ttgctctgcaggttgctgctg 648 ||||||||||||||||||||| Sbjct: 1619 ttgctctgcaggttgctgctg 1639
>gb|AC158933.3| Mus musculus chromosome 1, clone RP23-300M22, complete sequence Length = 152221 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1615 atgtgcatgtgtctgtgtatg 1635 ||||||||||||||||||||| Sbjct: 46754 atgtgcatgtgtctgtgtatg 46774
>gb|AC145984.3| Pan troglodytes BAC clone RP43-17F10 from 7, complete sequence Length = 186825 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 843 ttacaagaagatgatcatgaa 863 ||||||||||||||||||||| Sbjct: 134445 ttacaagaagatgatcatgaa 134465
>gb|AC158983.2| Mus musculus BAC clone RP23-264L8 from chromosome 14, complete sequence Length = 218519 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1615 atgtgcatgtgtctgtgtatg 1635 ||||||||||||||||||||| Sbjct: 172488 atgtgcatgtgtctgtgtatg 172508
>gb|AC158614.5| Mus musculus 10 BAC RP23-76C5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 223468 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1615 atgtgcatgtgtctgtgtatg 1635 ||||||||||||||||||||| Sbjct: 98328 atgtgcatgtgtctgtgtatg 98348
>gb|AC129080.6| Mus musculus BAC clone RP24-226L20 from chromosome 5, complete sequence Length = 156781 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1611 tcacatgtgcatgtgtctgtgtatg 1635 |||||||||||||||| |||||||| Sbjct: 14669 tcacatgtgcatgtgtgtgtgtatg 14693
>gb|AC127545.4| Mus musculus BAC clone RP24-562H22 from chromosome 19, complete sequence Length = 146015 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1612 cacatgtgcatgtgtctgtgt 1632 ||||||||||||||||||||| Sbjct: 35817 cacatgtgcatgtgtctgtgt 35797 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1612 cacatgtgcatgtgtctgtgt 1632 ||||||||||||||||||||| Sbjct: 35963 cacatgtgcatgtgtctgtgt 35943
>gb|AC123795.4| Mus musculus BAC clone RP24-317K11 from chromosome 5, complete sequence Length = 188616 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1612 cacatgtgcatgtgtctgtgtatgg 1636 ||||||||||||||| ||||||||| Sbjct: 138323 cacatgtgcatgtgtgtgtgtatgg 138347
>gb|AC005094.1| Homo sapiens BAC clone CTA-332B22 from 7, complete sequence Length = 158078 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 843 ttacaagaagatgatcatgaa 863 ||||||||||||||||||||| Sbjct: 56624 ttacaagaagatgatcatgaa 56604
>gb|AC146154.3| Pan troglodytes BAC clone RP43-37E8 from 7, complete sequence Length = 240699 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 843 ttacaagaagatgatcatgaa 863 ||||||||||||||||||||| Sbjct: 141089 ttacaagaagatgatcatgaa 141069
>dbj|AK126852.1| Homo sapiens cDNA FLJ44904 fis, clone BRAMY3005656 Length = 3468 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 aggccacagccaggattctgg 508 ||||||||||||||||||||| Sbjct: 1846 aggccacagccaggattctgg 1866
>gb|AC134265.6| Rattus norvegicus 13 BAC CH230-151K3 (Children's Hospital Oakland Research Institute) complete sequence Length = 209981 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1615 atgtgcatgtgtctgtgtatg 1635 ||||||||||||||||||||| Sbjct: 48321 atgtgcatgtgtctgtgtatg 48341
>gb|AC118541.12| Mus musculus strain 129/SvJ chromosome 17 clone mgs1-205i23, complete sequence Length = 179569 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1615 atgtgcatgtgtctgtgtatg 1635 ||||||||||||||||||||| Sbjct: 126720 atgtgcatgtgtctgtgtatg 126700
>gb|AC156994.8| Mus musculus chromosome 5, clone RP23-312N12, complete sequence Length = 166581 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1613 acatgtgcatgtgtctgtgta 1633 ||||||||||||||||||||| Sbjct: 16756 acatgtgcatgtgtctgtgta 16736
>gb|AC009093.10| Homo sapiens chromosome 16 clone RP11-426C22, complete sequence Length = 207997 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 aggccacagccaggattctgg 508 ||||||||||||||||||||| Sbjct: 60682 aggccacagccaggattctgg 60662
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 ggcggaggcggctgcgaggac 171 ||||||||||||||||||||| Sbjct: 5909589 ggcggaggcggctgcgaggac 5909569
>emb|BX530027.11| Zebrafish DNA sequence from clone DKEYP-81G7 in linkage group 2, complete sequence Length = 181078 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1615 atgtgcatgtgtctgtgtatg 1635 ||||||||||||||||||||| Sbjct: 100354 atgtgcatgtgtctgtgtatg 100374
>emb|BX255894.19| Zebrafish DNA sequence from clone CH211-251G8 in linkage group 19, complete sequence Length = 180950 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 846 caagaagatgatcatgaatga 866 ||||||||||||||||||||| Sbjct: 64738 caagaagatgatcatgaatga 64758
>gb|AC073618.48| Homo sapiens 12 BAC RP11-313E9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 92909 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 791 aggccagagagaatgcagcag 811 ||||||||||||||||||||| Sbjct: 17353 aggccagagagaatgcagcag 17373
>gb|AC127279.3| Mus musculus BAC clone RP24-247K4 from chromosome 10, complete sequence Length = 185573 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1615 atgtgcatgtgtctgtgtatg 1635 ||||||||||||||||||||| Sbjct: 134616 atgtgcatgtgtctgtgtatg 134596
>emb|AL050143.1|HSM800443 Homo sapiens mRNA; cDNA DKFZp586B2420 (from clone DKFZp586B2420) Length = 2765 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1614 catgtgcatgtgtctgtgtat 1634 ||||||||||||||||||||| Sbjct: 216 catgtgcatgtgtctgtgtat 236
>gb|AC134312.3| Homo sapiens chromosome 16 clone RP11-863P13, complete sequence Length = 205610 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 aggccacagccaggattctgg 508 ||||||||||||||||||||| Sbjct: 91723 aggccacagccaggattctgg 91703
>gb|AC017028.11| Homo sapiens BAC clone RP11-275G7 from 2, complete sequence Length = 201971 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1616 tgtgcatgtgtctgtgtatgg 1636 ||||||||||||||||||||| Sbjct: 47202 tgtgcatgtgtctgtgtatgg 47182
>gb|AC005237.2|AC005237 Homo sapiens BAC clone RP11-556H17 from 2, complete sequence Length = 175179 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1614 catgtgcatgtgtctgtgtat 1634 ||||||||||||||||||||| Sbjct: 61029 catgtgcatgtgtctgtgtat 61049
>gb|AC127455.4| Homo sapiens chromosome 16 clone CTD-3057O21, complete sequence Length = 184641 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 aggccacagccaggattctgg 508 ||||||||||||||||||||| Sbjct: 4965 aggccacagccaggattctgg 4985
>gb|AC061965.16| Homo sapiens chromosome 15, clone RP11-37J13, complete sequence Length = 169399 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1614 catgtgcatgtgtctgtgtat 1634 ||||||||||||||||||||| Sbjct: 14114 catgtgcatgtgtctgtgtat 14134
>emb|BX255906.7| Zebrafish DNA sequence from clone DKEY-255I1 in linkage group 5, complete sequence Length = 151863 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1406 gctcattgaggcgtgctgcga 1426 ||||||||||||||||||||| Sbjct: 117552 gctcattgaggcgtgctgcga 117572
>emb|Z54976.1|HS17D3R H.sapiens CpG island DNA genomic Mse1 fragment, clone 17d3, reverse read cpg17d3.rt1b Length = 284 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 488 aggccacagccaggattctgg 508 ||||||||||||||||||||| Sbjct: 18 aggccacagccaggattctgg 38
>emb|CT025839.2| Medicago truncatula chromosome 5 clone mth4-19c21, COMPLETE SEQUENCE Length = 210117 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1575 atttaatctaaaggaactaat 1595 ||||||||||||||||||||| Sbjct: 154473 atttaatctaaaggaactaat 154453
>gb|AC147717.1| Gallus gallus BAC clone CH261-5M18 from chromosome unknown, complete sequence Length = 189841 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 635 gcaggttgctgctgtcctcag 655 ||||||||||||||||||||| Sbjct: 121441 gcaggttgctgctgtcctcag 121421
>gb|AC134862.4| Mus musculus BAC clone RP24-91P2 from 5, complete sequence Length = 205726 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1612 cacatgtgcatgtgtctgtgtatgg 1636 ||||||||||||||| ||||||||| Sbjct: 204075 cacatgtgcatgtgtgtgtgtatgg 204051
>emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0045O17, complete sequence Length = 137981 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 ggcggaggcggctgcgaggac 171 ||||||||||||||||||||| Sbjct: 52826 ggcggaggcggctgcgaggac 52806
>gb|AC145559.4| Mus musculus BAC clone RP23-371A1 from 5, complete sequence Length = 203726 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1611 tcacatgtgcatgtgtctgtgtatg 1635 |||||||||||||||| |||||||| Sbjct: 167567 tcacatgtgcatgtgtgtgtgtatg 167591
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 628 ttgctctgcaggttgctgctg 648 ||||||||||||||||||||| Sbjct: 3215936 ttgctctgcaggttgctgctg 3215916
>gb|AC136837.1| Homo sapiens chromosome 16 clone RP11-483N11, complete sequence Length = 65756 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 aggccacagccaggattctgg 508 ||||||||||||||||||||| Sbjct: 3787 aggccacagccaggattctgg 3767
>dbj|AK074075.1| Homo sapiens mRNA for FLJ00146 protein Length = 5493 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1614 catgtgcatgtgtctgtgtat 1634 ||||||||||||||||||||| Sbjct: 2995 catgtgcatgtgtctgtgtat 3015
>emb|AL833796.4| Mouse DNA sequence from clone RP23-361A12 on chromosome X, complete sequence Length = 160626 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1615 atgtgcatgtgtctgtgtatg 1635 ||||||||||||||||||||| Sbjct: 92501 atgtgcatgtgtctgtgtatg 92521 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 291,325,114 Number of extensions: 15340739 Number of successful extensions: 325341 Number of sequences better than 10.0: 99 Number of HSP's gapped: 325333 Number of HSP's successfully gapped: 129 Length of query: 1702 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1679 Effective length of database: 18,503,978,556 Effective search space: 31068179995524 Effective search space used: 31068179995524 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)