>LOC_Os02g13970:12002.t01193:unspliced-genomic UOS1, putative, expressed|
Length = 5356
Score = 118 bits (253), Expect = 2e-26
Identities = 50/57 (87%), Positives = 52/57 (91%)
Frame = +2 / +1
Query: 20 VKSTVPFSEPFVIDPSNPPPEKDYEVYFKELKDGITGKEALEGTPALV*RLRRMQNA 190
VKSTVPFSEPFV+DPSNPPPEKDY+VYFKELK GITGKEALEGTPA V*R MQNA
Sbjct: 4612 VKSTVPFSEPFVVDPSNPPPEKDYDVYFKELKAGITGKEALEGTPAQV*RTC*MQNA 4782
Score = 54.7 bits (113), Expect(2) = 2e-12
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = -3 / -3
Query: 189 AFCIRRNRQTRAGVPSRASLPVMPSLSSLKYT 94
AFCI QT AGVPS ASLPVMP+LSSLKYT
Sbjct: 4781 AFCI*HVLQT*AGVPSSASLPVMPALSSLKYT 4686
Score = 36.3 bits (73), Expect(2) = 2e-12
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -2 / -2
Query: 76 RWV*RIDHKRFTKWNGTLDL 17
R +*RI+H+RFT+WN LDL
Sbjct: 4668 RRI*RINHERFTEWNSALDL 4609
Score = 63.4 bits (132), Expect = 9e-10
Identities = 34/60 (56%), Positives = 41/60 (68%)
Frame = -1 / -1
Query: 191 GHSAFDVIVRLEQVFLQGPLYP*CRL*AP*STLRSPSQEVGLKDRSQTVH*MERYS*PQK 12
G SAF++ R EQVFL PLY C+L*A *+T S S E LKD+ + VH*ME+ S*P K
Sbjct: 4783 GRSAFNMFFRPEQVFLLVPLYLLCQL*AL*NTHHSLSLEEDLKDQPRKVH*MEQCS*PNK 4604
Score = 37.3 bits (75), Expect = 0.068
Identities = 26/58 (44%), Positives = 28/58 (48%)
Frame = +1 / +3
Query: 19 GQEYRSI**TVCDRSFKPTS*EGLRSVLQGAQXXXXXXXXXXXNTCSSLTITSNAECP 192
GQE+ SI *T SFK +S E L V Q AQ NTCS L NAE P
Sbjct: 4611 GQEHCSIQ*TFRG*SFKSSSRERL*CVFQRAQSWHNR*RGTRRNTCSGLKNMLNAERP 4784
Score = 33.1 bits (66), Expect = 1.2
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +3 / +2
Query: 129 VKRPLKEHLL*SDDYVECRMPS 194
VKR KEHLL S+++V+CR P+
Sbjct: 4721 VKRH*KEHLLRSEEHVKCRTPN 4786
>LOC_Os11g06930:12011.t00585:unspliced-genomic CBS domain containing protein, expressed|
Length = 5476
Score = 24.0 bits (46), Expect(2) = 9.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -3 / -3
Query: 417 ISIATKNKTLALLFRISDSTTIDTVETQTTCFSPH 313
+++ +NK L + + S T + + T TTC S H
Sbjct: 3956 LNLQRRNKPNC*LEQYNHSLTFNQLVTPTTCKSMH 3852
Score = 23.1 bits (44), Expect(2) = 9.3
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2 / -1
Query: 457 FFFFCIQSPLSYL 419
FFFFC Q+ Y+
Sbjct: 4093 FFFFCFQTLTKYI 4055
Database: tigr.seq.out
Posted date: Jul 20, 2007 8:58 AM
Number of letters in database: 166,841,660
Number of sequences in database: 56,278
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 160,010,036
Number of extensions: 2251036
Number of successful extensions: 6007
Number of sequences better than 10.0: 8
Length of query: 153
Length of database: 55,613,886
Length adjustment: 47
Effective length of query: 106
Effective length of database: 52,968,820
Effective search space: 5614694920
Effective search space used: 5614694920
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)