| Clone Name | FLbaf54g14 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK119821: | 29 | 1.9 | 2 | AK062615:Os12g0633200 | 28 | 3.2 | 3 | AK070827:Os03g0203200 | 28 | 4.2 | 4 | AK107461:Os01g0274800 | 27 | 7.2 | 5 | AK111789:Os01g0256800 | 27 | 9.4 | 6 | AK100311:Os01g0256800 | 27 | 9.4 |
|---|
>AK119821: | Length = 839 Score = 28.9 bits (63), Expect = 1.9 Identities = 14/47 (29%), Positives = 23/47 (48%) Frame = +1 Query: 58 WADPRALSQDVSPVLHQREGHQGVHHQEGIPSRCADAVCPPSSFLPG 198 WA+ A Q+++ LH QG + P+R A + P+ + PG Sbjct: 216 WANQYASDQEITAKLHIGVSSQGSINSFASPARAAPSFFRPAQYSPG 262
>AK062615:Os12g0633200 | Length = 139 Score = 28.1 bits (61), Expect = 3.2 Identities = 9/20 (45%), Positives = 15/20 (75%) Frame = +2 Query: 422 LWIVLLCTMCSLCDFHLGSK 481 +W +L CT+C LC F+L ++ Sbjct: 55 VWTLLTCTLCFLCAFNLENR 74
>AK070827:Os03g0203200 | Length = 318 Score = 27.7 bits (60), Expect = 4.2 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = -3 Query: 366 MVLSSHG*STLQTAFTKVNRSLRRTHSVLQY--FCAGCWVGSNPNLF 232 +V+ SHG T Q+A+++V L R H V+ Y CAG NP+ F Sbjct: 71 VVVLSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAG---SVNPDHF 114
>AK107461:Os01g0274800 | Length = 205 Score = 26.9 bits (58), Expect = 7.2 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = -1 Query: 239 TSSSTGNADGRTCHPGRNELGGQTASAHREGIPSWWCTP*CPSR*CSTGDTSWLKARGSA 60 T TG R G G+TA++ R S P PSR +TG +SW A S+ Sbjct: 7 TRGLTGGRSRRRRRSGSWRRTGRTATSGRSSPASSPAAPTTPSR--TTGTSSWRAATASS 64
>AK111789:Os01g0256800 | Length = 536 Score = 26.6 bits (57), Expect = 9.4 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 83 KMYLQYYINEKGIKVYTTKKESPL 154 KMY Y E+GI + T KKE+ L Sbjct: 54 KMYRNNYFEEEGIDLQTGKKEAAL 77
>AK100311:Os01g0256800 | Length = 1037 Score = 26.6 bits (57), Expect = 9.4 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = +2 Query: 83 KMYLQYYINEKGIKVYTTKKESPL 154 KMY Y E+GI + T KKE+ L Sbjct: 555 KMYRNNYFEEEGIDLQTGKKEAAL 578 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 13,917,870 Number of extensions: 316974 Number of successful extensions: 737 Number of sequences better than 10.0: 6 Number of HSP's gapped: 737 Number of HSP's successfully gapped: 6 Length of query: 165 Length of database: 15,399,855 Length adjustment: 93 Effective length of query: 72 Effective length of database: 11,676,042 Effective search space: 840675024 Effective search space used: 840675024 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)