ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf54g14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK119821: 29 1.9
2AK062615:Os12g0633200 28 3.2
3AK070827:Os03g0203200 28 4.2
4AK107461:Os01g0274800 27 7.2
5AK111789:Os01g0256800 27 9.4
6AK100311:Os01g0256800 27 9.4

>AK119821: |
          Length = 839
 Score = 28.9 bits (63), Expect = 1.9
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +1

Query: 58  WADPRALSQDVSPVLHQREGHQGVHHQEGIPSRCADAVCPPSSFLPG 198
           WA+  A  Q+++  LH     QG  +    P+R A +   P+ + PG
Sbjct: 216 WANQYASDQEITAKLHIGVSSQGSINSFASPARAAPSFFRPAQYSPG 262



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>AK062615:Os12g0633200 |
          Length = 139

 Score = 28.1 bits (61), Expect = 3.2
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = +2

Query: 422 LWIVLLCTMCSLCDFHLGSK 481
           +W +L CT+C LC F+L ++
Sbjct: 55  VWTLLTCTLCFLCAFNLENR 74



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>AK070827:Os03g0203200 |
          Length = 318

 Score = 27.7 bits (60), Expect = 4.2
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = -3

Query: 366 MVLSSHG*STLQTAFTKVNRSLRRTHSVLQY--FCAGCWVGSNPNLF 232
           +V+ SHG  T Q+A+++V   L R H V+ Y   CAG     NP+ F
Sbjct: 71  VVVLSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAG---SVNPDHF 114



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>AK107461:Os01g0274800 |
          Length = 205

 Score = 26.9 bits (58), Expect = 7.2
 Identities = 20/60 (33%), Positives = 26/60 (43%)
 Frame = -1

Query: 239 TSSSTGNADGRTCHPGRNELGGQTASAHREGIPSWWCTP*CPSR*CSTGDTSWLKARGSA 60
           T   TG    R    G     G+TA++ R    S    P  PSR  +TG +SW  A  S+
Sbjct: 7   TRGLTGGRSRRRRRSGSWRRTGRTATSGRSSPASSPAAPTTPSR--TTGTSSWRAATASS 64



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>AK111789:Os01g0256800 |
          Length = 536

 Score = 26.6 bits (57), Expect = 9.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 83  KMYLQYYINEKGIKVYTTKKESPL 154
           KMY   Y  E+GI + T KKE+ L
Sbjct: 54  KMYRNNYFEEEGIDLQTGKKEAAL 77



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>AK100311:Os01g0256800 |
          Length = 1037

 Score = 26.6 bits (57), Expect = 9.4
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 83  KMYLQYYINEKGIKVYTTKKESPL 154
           KMY   Y  E+GI + T KKE+ L
Sbjct: 555 KMYRNNYFEEEGIDLQTGKKEAAL 578


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 13,917,870
Number of extensions: 316974
Number of successful extensions: 737
Number of sequences better than 10.0: 6
Number of HSP's gapped: 737
Number of HSP's successfully gapped: 6
Length of query: 165
Length of database: 15,399,855
Length adjustment: 93
Effective length of query: 72
Effective length of database: 11,676,042
Effective search space: 840675024
Effective search space used: 840675024
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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