ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf54g14 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os02g40514:12002.t005550:unspliced-genomic h/ACA ribonucleoprotein complex subunit 3-like protein, putative,| expressed Length = 1955 Score = 74.8 bits (157), Expect(3) = 2e-26 Identities = 30/33 (90%), Positives = 32/33 (96%) Frame = +2 / +2 Query: 182 ARFSPDDKYARQRYLLKKRFGLLPTQQPAQKY* 280 ARFSPDDKY+RQRYLLKKRFGLLPTQ+PA KY* Sbjct: 1514 ARFSPDDKYSRQRYLLKKRFGLLPTQKPAPKY* 1612 Score = 46.4 bits (95), Expect(3) = 2e-26 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = +2 / +2 Query: 80 AKMYLQYYINEKGIKVYTTK 139 +KMYLQYYINEKG KVYTTK Sbjct: 266 SKMYLQYYINEKGDKVYTTK 325 Score = 39.6 bits (80), Expect(3) = 2e-26 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = +2 / +3 Query: 137 KKESPLGVPTQSAHPARFSPDD 202 +KESPLGVPTQSAHP + D Sbjct: 432 QKESPLGVPTQSAHPGTVTSSD 497 Score = 63.4 bits (132), Expect(3) = 5e-22 Identities = 27/35 (77%), Positives = 28/35 (80%) Frame = -3 / -3 Query: 285 VLQYFCAGCWVGSNPNLFFNXXXXRAYLSSGEKRA 181 +LQYF AG WVGSNPNLFFN R YLSSGEKRA Sbjct: 1617 LLQYFGAGFWVGSNPNLFFNRYLWREYLSSGEKRA 1513 Score = 47.3 bits (97), Expect(3) = 5e-22 Identities = 18/28 (64%), Positives = 19/28 (67%) Frame = -1 / -1 Query: 137 WWCTP*CPSR*CSTGDTSWLKARGSAQR 54 WWCTP PSR*CSTGDTS + A R Sbjct: 323 WWCTPCPPSR*CSTGDTSSIDAAAGQNR 240 Score = 35.0 bits (70), Expect(3) = 5e-22 Identities = 13/14 (92%), Positives = 13/14 (92%) Frame = -3 / -2 Query: 180 GWADCVGTPRGDSF 139 G ADCVGTPRGDSF Sbjct: 475 G*ADCVGTPRGDSF 434 Score = 52.4 bits (108), Expect(3) = 2e-16 Identities = 23/37 (62%), Positives = 25/37 (67%) Frame = +3 / +3 Query: 171 LPTQLVSPRMTSTPVSVTC*RRGLDCCQPSSQHKSTE 281 L QL S +MTST TC*RR CCQP SQH+STE Sbjct: 1503 LVLQLASLQMTSTHARDTC*RRDSGCCQPKSQHQSTE 1613 Score = 46.0 bits (94), Expect(3) = 2e-16 Identities = 17/19 (89%), Positives = 18/19 (94%) Frame = +1 / +1 Query: 82 QDVSPVLHQREGHQGVHHQ 138 +DVSPVLHQREG QGVHHQ Sbjct: 268 EDVSPVLHQREGGQGVHHQ 324 Score = 28.1 bits (55), Expect(3) = 2e-16 Identities = 10/14 (71%), Positives = 11/14 (78%) Frame = +1 / +2 Query: 139 EGIPSRCADAVCPP 180 EGI SRC+ AVC P Sbjct: 434 EGISSRCSHAVCSP 475 Score = 44.1 bits (90), Expect(3) = 2e-12 Identities = 21/34 (61%), Positives = 24/34 (70%) Frame = -1 / -1 Query: 281 FSTFVLAAGLAAIQTSSSTGNADGRTCHPGRNEL 180 FST VLA GLAA + SSSTG + TCH R+EL Sbjct: 1613 FSTLVLAFGLAATRISSSTGISGVSTCHLERSEL 1512 Score = 43.2 bits (88), Expect(3) = 2e-12 Identities = 17/18 (94%), Positives = 17/18 (94%) Frame = -3 / -3 Query: 138 LVVYTLMPFSLM*YWRYI 85 LVVYTL PFSLM*YWRYI Sbjct: 324 LVVYTLSPFSLM*YWRYI 271 Score = 25.4 bits (49), Expect(3) = 2e-12 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = -2 / -1 Query: 190 ETSWVGRLRRHTERGF 143 + +WV RLR +TER F Sbjct: 485 DRTWVSRLRGNTERRF 438 Score = 46.9 bits (96), Expect = 1e-04 Identities = 22/34 (64%), Positives = 25/34 (73%) Frame = +1 / +1 Query: 181 SSFLPG*QVRPSALPVEEEVWIAANPAASTKVLK 282 SS L *QV +PVEEE+ +AANP ASTKVLK Sbjct: 1513 SSLLSR*QVLTPEIPVEEEIRVAANPKASTKVLK 1614 Score = 34.1 bits (68), Expect(2) = 0.024 Identities = 12/14 (85%), Positives = 12/14 (85%) Frame = -2 / -2 Query: 286 SASVLLCWLLGWQQ 245 S SVL CWLLGWQQ Sbjct: 1618 SPSVLWCWLLGWQQ 1577 Score = 25.4 bits (49), Expect(2) = 0.024 Identities = 11/15 (73%), Positives = 11/15 (73%) Frame = -1 / -3 Query: 182 LGGQTASAHREGIPS 138 LG QTA HRE IPS Sbjct: 477 LGEQTAWEHREEIPS 433
>LOC_Os02g17970:12002.t01591:unspliced-genomic cyclic nucleotide-binding domain containing protein, expressed| Length = 8999 Score = 34.5 bits (69), Expect = 0.51 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 / -1 Query: 100 LHQREGHQGVHHQEGIPSRCADAVCP 177 +HQR GHQG+ E + C CP Sbjct: 2867 IHQRNGHQGLFQMEYVYKNCLGLACP 2790
>LOC_Os01g32610:12001.t02835:unspliced-genomic expressed protein| Length = 3707 Score = 34.5 bits (69), Expect = 0.51 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +1 / -3 Query: 91 SPVLHQREGHQGVHHQEGIPSRCADAVCPP 180 +P LH+ H VHH+ P R A ++ PP Sbjct: 405 APSLHRLPSHSAVHHRRSRPPRTAPSLFPP 316
>LOC_Os11g01460:12011.t004365:unspliced-genomic conserved hypothetical protein| Length = 2906 Score = 34.1 bits (68), Expect = 0.70 Identities = 11/40 (27%), Positives = 22/40 (55%) Frame = +2 / -3 Query: 350 CEERTITATYLAHYCSTSECNAMILWIVLLCTMCSLCDFH 469 C + + H+C EC +++ ++L C++C+L FH Sbjct: 1599 CRNYLTSWVAMPHFCYILECFSVVEHLLLPCSLCALIYFH 1480
>LOC_Os01g47670:12001.t04213:unspliced-genomic expressed protein| Length = 1209 Score = 33.6 bits (67), Expect = 0.96 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +1 / +3 Query: 49 ANLWADPRALSQDVSPVLHQREGHQGVHHQEGIPSR 156 A+L AD A + SP + G QGVHH +P R Sbjct: 930 ASLAADAAASMPEPSPEADRHAGDQGVHHARVVPRR 1037
>LOC_Os07g42104:12007.t03867:unspliced-genomic expressed protein| Length = 13445 Score = 30.9 bits (61), Expect(2) = 1.4 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -1 / +2 Query: 134 WCTP*CPSR*CSTGDTSWLKARGSA 60 W T C S CSTG SW +RG++ Sbjct: 9710 WITLRCAS*RCSTGGCSWAASRGAS 9784 Score = 24.9 bits (48), Expect(2) = 1.4 Identities = 8/13 (61%), Positives = 9/13 (69%) Frame = -3 / +1 Query: 186 RAGWADCVGTPRG 148 R GW C G+PRG Sbjct: 4519 RRGWR*CPGSPRG 4557
>LOC_Os10g40540:12010.t03293:unspliced-genomic 3-hydroxyisobutyryl-CoA hydrolase/ catalytic, putative, expressed| Length = 4079 Score = 32.7 bits (65), Expect = 1.8 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +3 / +1 Query: 405 NVML*YYGSYSYVLCALCVTFIW 473 N M YG Y++CALCVT W Sbjct: 2677 NTMFMLYGINVYLICALCVTLGW 2745
>LOC_Os04g09284:12004.t00768:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 6207 Score = 32.7 bits (65), Expect = 1.8 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = -1 / +2 Query: 200 HPGRNELGGQTASAHREGIP 141 +PGR+ GG T SAH +G+P Sbjct: 5645 YPGRSPFGGSTWSAHSKGLP 5704
>LOC_Os01g26940:12001.t02398:unspliced-genomic RNA binding protein, putative, expressed| Length = 6264 Score = 32.7 bits (65), Expect = 1.8 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +2 / +1 Query: 380 LAHYCSTSECNAMILWIVLLCTMCS 454 L YC++ E AM IV CT+CS Sbjct: 4534 LGEYCASWEAMAMFFLIVCFCTLCS 4608
>LOC_Os01g26840:12001.t02376:unspliced-genomic RNA recognition motif family protein, expressed| Length = 7085 Score = 32.7 bits (65), Expect = 1.8 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = +2 / +1 Query: 380 LAHYCSTSECNAMILWIVLLCTMCS 454 L YC++ E AM IV CT+CS Sbjct: 2755 LGEYCASWEAMAMFFLIVCFCTLCS 2829
>LOC_Os07g23820:12007.t02079:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3265 Score = 32.2 bits (64), Expect = 2.5 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRNELGGQ 171 AG A ++ G + GR CHPG N G + Sbjct: 2362 AGRACLRRGEGPGGSRGRRCHPGGNAGGAR 2451
>LOC_Os04g52240:12004.t04700:unspliced-genomic terpene synthase family, metal binding domain containing protein| Length = 8381 Score = 32.2 bits (64), Expect = 2.5 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -3 / +1 Query: 207 YLSSGEKRAGWADCVGTPRGDSFLVVYTLMPFSLM 103 + ++G KRAGW C R + + L+PFSL+ Sbjct: 4687 FAAAG*KRAGWISCNSHGRSWTTSISLLLLPFSLL 4791
>LOC_Os03g06550:12003.t00522:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3292 Score = 32.2 bits (64), Expect = 2.5 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRNELGGQ 171 AG A ++ G GR CHPG N G + Sbjct: 2362 AGRACLRRGEGPGGPQGRRCHPGGNAGGAR 2451
>LOC_Os01g05670:12001.t00451:unspliced-genomic synaptic glycoprotein SC2, putative, expressed| Length = 3931 Score = 32.2 bits (64), Expect = 2.5 Identities = 10/25 (40%), Positives = 17/25 (68%) Frame = +2 / +3 Query: 383 AHYCSTSECNAMILWIVLLCTMCSL 457 AH ST+ C+++ W++ L T CS+ Sbjct: 2754 AHRSSTARCSSLNTWVLFLSTPCSI 2828
>LOC_Os07g22400:12007.t01944:unspliced-genomic DNA primase large subunit, putative, expressed| Length = 5086 Score = 31.8 bits (63), Expect = 3.4 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +2 / +3 Query: 410 NAMILWIVLLCTMCSLCDF 466 N ++W +LLC CSLC F Sbjct: 1227 NLQLVWNILLCDTCSLCCF 1283
>LOC_Os12g40820:12012.t03760:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3279 Score = 31.3 bits (62), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / +3 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRN 186 AG A ++ G + GR CHPG N Sbjct: 2349 AGRACLRRGEGPGGSRGRRCHPGGN 2423
>LOC_Os12g12780:12012.t01146:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3228 Score = 31.3 bits (62), Expect = 4.7 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = -2 / -1 Query: 478 GSQMKVTQRAHST*EYDP*YHSITFRGTAIMSKISSSNGS 359 G + VT+ T +Y P Y S TF + S ISS+NGS Sbjct: 1278 G*SLMVTKMIAFTVKYSPKYSSHTFNPSFHKSAISSNNGS 1159
>LOC_Os12g04040:12012.t00294:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3292 Score = 31.3 bits (62), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRN 186 AG A ++ G + GR CHPG N Sbjct: 2362 AGRACLRRGEGPGGSRGRRCHPGGN 2436
>LOC_Os11g40830:12011.t03624:unspliced-genomic retrotransposon protein, putative, unclassified, expressed| Length = 3367 Score = 31.3 bits (62), Expect = 4.7 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRNELGGQ 171 AG A ++ G GR CHPG N G + Sbjct: 2332 AGRACLRRGEGPGGPRGRRCHPGGNAGGAR 2421
>LOC_Os11g39900:12011.t03532:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3292 Score = 31.3 bits (62), Expect = 4.7 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRNELGGQ 171 AG A ++ G GR CHPG N G + Sbjct: 2362 AGRACLRRGEGPGGPRGRRCHPGGNAGGAR 2451
>LOC_Os10g39980:12010.t03243:unspliced-genomic citrate transporter family protein, expressed| Length = 2591 Score = 31.3 bits (62), Expect = 4.7 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = +2 / -2 Query: 158 VPTQSAHPARFSPDDKYARQRYLLKKRFGLLPTQQ 262 VP AHP + P ++ R+ Y ++R L+P QQ Sbjct: 1843 VPRHRAHPRQQQPRPRHRRR*YRRRRRRHLIPHQQ 1739
>LOC_Os08g03960:12008.t00291:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2440 Score = 31.3 bits (62), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRN 186 AG A ++ G + GR CHPG N Sbjct: 1567 AGRACLRRGEGPGGSRGRRCHPGGN 1641
>LOC_Os07g31060:12007.t02793:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3292 Score = 31.3 bits (62), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRN 186 AG A ++ G + GR CHPG N Sbjct: 2362 AGRACLRRGEGPGGSRGRRCHPGGN 2436
>LOC_Os06g44960:12006.t04183:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3291 Score = 31.3 bits (62), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / +3 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRN 186 AG A ++ G + GR CHPG N Sbjct: 2361 AGRACLRRGEGPGGSRGRRCHPGGN 2435
>LOC_Os06g01570:12006.t00054:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3292 Score = 31.3 bits (62), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRN 186 AG A ++ G + GR CHPG N Sbjct: 2362 AGRACLRRGEGPGGSRGRRCHPGGN 2436
>LOC_Os05g43420:12005.t03833:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3292 Score = 31.3 bits (62), Expect = 4.7 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRNELGGQ 171 AG A ++ G GR CHPG N G + Sbjct: 2362 AGRACLRRGEGLGGPRGRRCHPGGNAGGAR 2451
>LOC_Os04g35960:12004.t03266:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3034 Score = 31.3 bits (62), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRN 186 AG A ++ G + GR CHPG N Sbjct: 2362 AGRACLRRGEGPGGSRGRRCHPGGN 2436
>LOC_Os04g33780:12004.t03054:unspliced-genomic cysteine-type peptidase, putative, expressed| Length = 5193 Score = 31.3 bits (62), Expect = 4.7 Identities = 18/70 (25%), Positives = 28/70 (40%) Frame = +1 / -2 Query: 67 PRALSQDVSPVLHQREGHQGVHHQEGIPSRCADAVCPPSSFLPG*QVRPSALPVEEEVWI 246 PRA + S REG H Q R A L + P P+ E+ + Sbjct: 722 PRAARRSSSSPTLLREGSTSTHQQPSSNQRATSAPLSRVRTLGAVNLAPPPPPLPRELLL 543 Query: 247 AANPAASTKV 276 +++PAA+ + Sbjct: 542 SSSPAANLSI 513
>LOC_Os04g08430:12004.t00711:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3292 Score = 31.3 bits (62), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRN 186 AG A ++ G + GR CHPG N Sbjct: 2362 AGRACLRRGEGPGGSRGRRCHPGGN 2436
>LOC_Os04g01630:12004.t00061:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3291 Score = 31.3 bits (62), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / +3 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRN 186 AG A ++ G + GR CHPG N Sbjct: 2361 AGRACLRRGEGPGGSRGRRCHPGGN 2435
>LOC_Os03g39580:12003.t03391:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3293 Score = 31.3 bits (62), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / +2 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRN 186 AG A ++ G + GR CHPG N Sbjct: 2363 AGRACLRRGEGPGGSRGRRCHPGGN 2437
>LOC_Os03g24130:12003.t02108:unspliced-genomic expressed protein| Length = 842 Score = 31.3 bits (62), Expect = 4.7 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = -1 / -2 Query: 164 SAHREGIPSWWCTP*CPSR*CSTG 93 S H+ G S WCT C R CS G Sbjct: 466 SVHQLGYVSLWCTSRCSCRTCSAG 395
>LOC_Os02g53540:12002.t04933:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3292 Score = 31.3 bits (62), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRN 186 AG A ++ G + GR CHPG N Sbjct: 2362 AGRACLRRGEGLGGSRGRRCHPGGN 2436
>LOC_Os02g52930:12002.t04873:unspliced-genomic nodulin protein, putative, expressed| Length = 2905 Score = 31.3 bits (62), Expect = 4.7 Identities = 9/28 (32%), Positives = 15/28 (53%) Frame = +1 / +2 Query: 61 ADPRALSQDVSPVLHQREGHQGVHHQEG 144 A+ ++ + P LH H G+HH +G Sbjct: 2135 AEGPSVRDSIQPALHDHHRHHGLHHSQG 2218
>LOC_Os01g74270:12001.t06707:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3142 Score = 31.3 bits (62), Expect = 4.7 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRN 186 AG A ++ G + GR CHPG N Sbjct: 2212 AGRACLRRGEGPGGSRGRRCHPGGN 2286
>LOC_Os01g51100:12001.t04544:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2833 Score = 31.3 bits (62), Expect = 4.7 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRNELGGQ 171 AG A ++ G GR CHPG N G + Sbjct: 2362 AGRACLRRGEGPGGLRGRRCHPGGNAGGAR 2451
>LOC_Os12g43670:12012.t04036:unspliced-genomic erg28 like protein, expressed| Length = 2461 Score = 30.9 bits (61), Expect = 6.5 Identities = 9/20 (45%), Positives = 15/20 (75%) Frame = +2 / +2 Query: 422 LWIVLLCTMCSLCDFHLGSK 481 +W +L CT+C LC F+L ++ Sbjct: 1253 VWTLLTCTLCFLCAFNLENR 1312
>LOC_Os12g36790:12012.t03359:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3597 Score = 30.9 bits (61), Expect = 6.5 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -1 / +1 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRNELGGQ 171 AG A ++ G GR CHPG N G + Sbjct: 2362 AGRARLRRGEGPGGPRGRRCHPGGNAGGAR 2451
>LOC_Os11g18366:12011.t01607:unspliced-genomic cycloartenol synthase, putative, expressed| Length = 24356 Score = 30.9 bits (61), Expect = 6.5 Identities = 15/45 (33%), Positives = 17/45 (37%) Frame = -1 / -1 Query: 179 GGQTASAHREGIPSWWCTP*CPSR*CSTGDTSWLKARGSAQRLAA 45 GG S R I WW P S + SWL R+AA Sbjct: 6737 GGSGVSGSRRWIQRWWRRPRADSAAAAPSVPSWLPPAADPARVAA 6603
>LOC_Os10g30860:12010.t02417:unspliced-genomic nicotiana lesion-inducing like, putative, expressed| Length = 4936 Score = 30.9 bits (61), Expect = 6.5 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +2 / +3 Query: 416 MILWIVLLCTMCSLCD 463 +I+W+V LC C++CD Sbjct: 2577 LIIWLVPLCCFCAICD 2624
>LOC_Os08g40810:12008.t03811:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 936 Score = 30.9 bits (61), Expect = 6.5 Identities = 12/28 (42%), Positives = 14/28 (50%) Frame = -1 / +3 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRNELG 177 AG A ++ G GR CHPG N G Sbjct: 6 AGRACLRRGEGPGGPRGRRCHPGGNAGG 89
>LOC_Os08g36680:12008.t03407:unspliced-genomic carbonic anhydrase precursor, putative, expressed| Length = 4264 Score = 30.9 bits (61), Expect = 6.5 Identities = 11/30 (36%), Positives = 15/30 (50%) Frame = -1 / +2 Query: 491 FFFFWIPNESHTEST*YIRVRSIIS*HYIQ 402 F FFWI HT + Y + I *H ++ Sbjct: 2234 FLFFWITRRIHTHTHFYTHIHEYIP*HMLE 2323
>LOC_Os07g13870:12007.t01251:unspliced-genomic F-box domain containing protein, expressed| Length = 2383 Score = 30.9 bits (61), Expect = 6.5 Identities = 14/37 (37%), Positives = 21/37 (56%) Frame = -1 / -2 Query: 257 GLAAIQTSSSTGNADGRTCHPGRNELGGQTASAHREG 147 GLA ++ +S+ ++ GRT N L G A+AH G Sbjct: 309 GLAGRRSRTSSSSSGGRTPSTAPNPLPGAAAAAHGSG 199
>LOC_Os04g08200:12004.t00691:unspliced-genomic conserved hypothetical protein| Length = 2226 Score = 30.9 bits (61), Expect = 6.5 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = -1 / -3 Query: 170 TASAHREGIPSWWCTP*CPSR*CST 96 TA+A R G S WC P P R CST Sbjct: 793 TAAATRAGRGSPWCRPPPPRRRCST 719
>LOC_Os03g28330:12003.t02502:unspliced-genomic sucrose synthase 2, putative, expressed| Length = 6350 Score = 30.9 bits (61), Expect = 6.5 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = -1 / -1 Query: 239 TSSSTGNADGRTCHPGRNELGGQT 168 TS T A R CHPG + G QT Sbjct: 5579 TSQRTQRAAPRPCHPGMGQCGSQT 5508
>LOC_Os03g05360:12003.t00408:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 12647 Score = 30.9 bits (61), Expect = 6.5 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = -1 / +1 Query: 143 PSWWCTP*CPSR*CSTGDTSWLKARGSAQR 54 PSWW P+R C T W++ S++R Sbjct: 11131 PSWWIWRRTPARIC*TSRHQWIRGSHSSRR 11220
>LOC_Os01g16470:12001.t01496:unspliced-genomic phosphatidylinositol 3- and 4-kinase family protein, expressed| Length = 2057 Score = 27.6 bits (54), Expect(2) = 7.2 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = +1 / +1 Query: 106 QREGHQGVHHQEGIPSRCADAVCPPSS 186 +R GH G+ + + S C V PP++ Sbjct: 139 ERNGHAGLSPRRSLSSPCFSTVVPPAA 219 Score = 23.1 bits (44), Expect(2) = 7.2 Identities = 9/27 (33%), Positives = 13/27 (48%) Frame = +2 / +2 Query: 389 YCSTSECNAMILWIVLLCTMCSLCDFH 469 +CS C+ + + LC C C FH Sbjct: 1823 HCSLLCCDIDMCLSIDLCLGCLGCSFH 1903
>LOC_Os06g29430:12006.t02647:unspliced-genomic deaminase, putative, expressed| Length = 6870 Score = 25.4 bits (49), Expect(2) = 7.5 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = -2 / -1 Query: 415 SITFRGTAIMSKISSSNGSLFTWLIYTPNSIH 320 SI GTA ++S++ S L++T NSI+ Sbjct: 2586 SIKTMGTANNCGVTSTDSSKINLLLHTANSIY 2491 Score = 22.1 bits (42), Expect(2) = 7.5 Identities = 12/42 (28%), Positives = 17/42 (40%) Frame = -1 / -2 Query: 305 LLGGPIQCFSTFVLAAGLAAIQTSSSTGNADGRTCHPGRNEL 180 +L CFS VL +A ++ + A C P EL Sbjct: 2426 VLASTCPCFSAVVLTISVAEVEYTRLCSAASR*LCGPLTMEL 2301
>LOC_Os12g30540:12012.t02761:unspliced-genomic ubiquitin carboxyl-terminal hydrolase 21, putative, expressed| Length = 14696 Score = 27.2 bits (53), Expect(2) = 8.7 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +3 / -3 Query: 207 TPVSVTC*RRGLDCCQPSSQH 269 TPV++TC + L CQ QH Sbjct: 3174 TPVTLTCIKLMLSICQTCKQH 3112 Score = 25.8 bits (50), Expect(2) = 8.7 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = +3 / -3 Query: 153 SVCRRSLPTQLVSPRMTSTPVSVTC* 230 S CR LP Q + P TST C* Sbjct: 8829 SYCRMLLPLQSLLPETTSTQHCAPC* 8752
>LOC_Os12g18470:12012.t01696:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2272 Score = 30.4 bits (60), Expect = 8.9 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -1 / +2 Query: 263 AAGLAAIQTSSSTGNADGRTCHPGRNE 183 AAGL A Q S A G T HPGR++ Sbjct: 1136 AAGLTADQGRSDRPRATGLTGHPGRSD 1216
>LOC_Os10g05680:12010.t00443:unspliced-genomic expressed protein| Length = 2186 Score = 30.4 bits (60), Expect = 8.9 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = +1 / +2 Query: 70 RALSQDVSPVLHQREGHQGVHHQEGIPSRCADAVC 174 +A Q + P + H G+++Q G+PS C C Sbjct: 983 QAEDQGLVPKTEGEQKHAGIYYQTGLPSVCLAVKC 1087
>LOC_Os09g23380:12009.t02022:unspliced-genomic cleavage and polyadenylation specificity factor, 73 kDa subunit,| putative, expressed Length = 5665 Score = 30.4 bits (60), Expect = 8.9 Identities = 17/62 (27%), Positives = 24/62 (38%) Frame = -1 / +2 Query: 239 TSSSTGNADGRTCHPGRNELGGQTASAHREGIPSWWCTP*CPSR*CSTGDTSWLKARGSA 60 +SSS+ + G R + R G +WW S CST +W A +A Sbjct: 167 SSSSSSSRTG*LMGTTRGLMAMAQGRGRRWGRAAWWSPSAAGSASCSTAACTWATATAAA 346 Query: 59 QR 54 R Sbjct: 347 TR 352
>LOC_Os06g49150:12006.t04599:unspliced-genomic exostosin-3, putative, expressed| Length = 2393 Score = 30.4 bits (60), Expect = 8.9 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = -1 / +3 Query: 170 TASAHREGIPSWWCTP*CPSR*CSTGDTSWLKARGSAQRLAA 45 +ASA G WC *CPS C W G+A AA Sbjct: 243 SASASAIGAVICWCWG*CPSCCCCRRRRRWRTGGGTAPAAAA 368
>LOC_Os06g29580:12006.t02662:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 8839 Score = 30.4 bits (60), Expect = 8.9 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = -1 / -2 Query: 308 DLLGGPIQCFSTFVLAAGLAAIQT 237 DLL P+Q +S F L GLA +QT Sbjct: 6438 DLLHDPLQRYSLFHLGTGLAQLQT 6367
>LOC_Os05g34220:12005.t03016:unspliced-genomic disease resistance protein, putative, expressed| Length = 3814 Score = 30.4 bits (60), Expect = 8.9 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -2 / -3 Query: 397 TAIMSKISSSNGSLFTWLIYTPNSIHQSKQIS*EDPFSASVLLCW 263 TAI S IS ++G L T L+ N ++ ++ + PFS + LL + Sbjct: 1178 TAICSPISFNSGCLSTSLLSKANFLNNNQTSANSSPFSQTNLLAF 1044
>LOC_Os05g27210:12005.t02373:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 1359 Score = 30.4 bits (60), Expect = 8.9 Identities = 11/30 (36%), Positives = 20/30 (66%) Frame = -1 / +3 Query: 263 AAGLAAIQTSSSTGNADGRTCHPGRNELGG 174 ++ +++SSS G++D R C G +E+GG Sbjct: 1014 SSAAVVLRSSSSGGHSDIRPCSSGYSEMGG 1103
>LOC_Os05g08790:12005.t00756:unspliced-genomic MAR binding filament-like protein 1, putative, expressed| Length = 3693 Score = 30.4 bits (60), Expect = 8.9 Identities = 10/24 (41%), Positives = 12/24 (50%) Frame = +2 / -1 Query: 401 SECNAMILWIVLLCTMCSLCDFHL 472 S A W +L C CS C FH+ Sbjct: 1866 SRREASFSWNILACFFCSACSFHI 1795
>LOC_Os04g07100:12004.t00585:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3293 Score = 30.4 bits (60), Expect = 8.9 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -1 / +2 Query: 260 AGLAAIQTSSSTGNADGRTCHPGRNELGGQ 171 AG A ++ G GR CHPG N G + Sbjct: 2363 AGRACLRRGEGPGGP*GRRCHPGGNAGGAR 2452
>LOC_Os03g36310:12003.t03102:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 3531 Score = 30.4 bits (60), Expect = 8.9 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +2 / +2 Query: 380 LAHYCSTSECNAMILWIVLLCTMCSLCDFHLGS 478 L H + CN++ L++ LL T+C L D + S Sbjct: 1280 LCHLDPSWSCNSLCLFVSLLWTICELDDLWMNS 1378
>LOC_Os03g28980:12003.t02518:unspliced-genomic WD40-like Beta Propeller Repeat family protein, expressed| Length = 2622 Score = 30.4 bits (60), Expect = 8.9 Identities = 12/38 (31%), Positives = 17/38 (44%) Frame = -1 / -1 Query: 245 IQTSSSTGNADGRTCHPGRNELGGQTASAHREGIPSWW 132 + +S S G GR+C R GG+ + P WW Sbjct: 2358 LASSISWGGGGGRSCASCRRRRGGRRGRPDGKPPPPWW 2245 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 196,219,656 Number of extensions: 3204790 Number of successful extensions: 14748 Number of sequences better than 10.0: 60 Length of query: 165 Length of database: 55,613,886 Length adjustment: 47 Effective length of query: 118 Effective length of database: 52,968,820 Effective search space: 6250320760 Effective search space used: 6250320760 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
