| Clone Name | FLbaf57o07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001069335.1| Oryza sativa (japonica cultivar-group) Os09g0296700 (Os09g0296700) mRNA, complete cds Length = 1884 Score = 1023 bits (516), Expect = 0.0 Identities = 999/1160 (86%) Strand = Plus / Plus Query: 436 gcgaacttcacgctctcaatcgcgcaccacggcgacctcgagtcgccggagttctggcag 495 ||||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||| Sbjct: 472 gcgaacttcacgctcgctatcgcccaccacggcgacctggagtcgccggagttctggctc 531 Query: 496 ggcttgcccgagcagtccaagaacttggcgtacaggctcgccactgcgcggtgtgagctc 555 |||||||||||| ||||||||||| |||| |||||||||||||| |||||||| |||||| Sbjct: 532 ggcttgcccgaggagtccaagaacatggcctacaggctcgccaccgcgcggtgcgagctc 591 Query: 556 tctcgggctgtcgttgtgtgccacagcgagcctggcgcgtggtacccgccgatgtacgag 615 || || || || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 tcccgcgccgtggttgtgtgccacagcgagcctggcgcgtggtacccgccgatgtacgag 651 Query: 616 tctctgccttgcccgcctaccggatacgacgagccggcgttcgtcattggccggacgatg 675 || |||||||||||||| ||||| |||||||||||||| ||||||||||| || || ||| Sbjct: 652 tccctgccttgcccgcccaccggctacgacgagccggctttcgtcattggacgcacaatg 711 Query: 676 ttcgagactgaccgtgtctcgccggagcatgtcaggcgctgtaaccagatggatgctgtc 735 || ||||||||||| |||||||||||||| |||||||| || ||||||||||| || ||| Sbjct: 712 tttgagactgaccgcgtctcgccggagcacgtcaggcggtgcaaccagatggacgccgtc 771 Query: 736 tgggtaccgacagagttccacgtctccacattcgtgaagagcggggtcgatccctccaag 795 ||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||| Sbjct: 772 tgggtgccgacggaattccatgtgtcgacgttcgtgaagagcggggtggatccctccaag 831 Query: 796 gtcgtcaaggtagtgcaggccgtcgatgtcacgttctttgatccggccaagcacgtcgcc 855 ||||||||||| |||||||| || ||||| ||||| |||||||| ||||||| |||| Sbjct: 832 gtcgtcaaggttgtgcaggctgtggatgtaggattcttcgatccggcgaagcacgccgcc 891 Query: 856 tttcctcttccgattggtttctctgtcatggcgcccgatgattctacatggaatcctgat 915 ||||| | ||||| ||| | |||| |||| ||| |||||||| | || | | |||| | Sbjct: 892 attcctttgccgatcggtgtgcctgtgatggtgcctgatgattcaagattggaccctgtt 951 Query: 916 agctccaaaggcaaaggttttgtgtttcttagtgtgttcaaatgggagcagaggaagggc 975 | ||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||| Sbjct: 952 aactccaaagggaaaggctttgtgttcctcagtgtgttcaaatgggagcagaggaagggg 1011 Query: 976 tgggatgtgcttctgacagcctatctgcaggagttctctggagctgatgatgttgtactc 1035 ||||||||||| || | ||| | ||||||||||||||||||| ||||||||||| || Sbjct: 1012 tgggatgtgctgctcagagctttcttgcaggagttctctggagccgatgatgttgtgctt 1071 Query: 1036 tacctactgaccaatgcttaccactctgacactgattttggagggaaaatccacagattt 1095 |||||||||| ||||||||||||||||||||| || || | ||||||||| || || Sbjct: 1072 tacctactgatcaatgcttaccactctgacacagacttcgataggaaaatccgtagcttc 1131 Query: 1096 atgaacaaatccagcattgaggagccagtgctaggatgggcagaagtccgggtggttgat 1155 | || | |||||||||||| |||| || |||||||||||||| ||| || | ||| Sbjct: 1132 gtcaaagattccagcattgagaagcctatggatggatgggcagaagttcggctgatcgat 1191 Query: 1156 gagcatgtcccacagtccgaccttccaaggttgtacaaggctgcagatgcatttgtgcta 1215 |||||| |||||||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1192 gagcatatcccacagtctgctcttccaaggttgtacaaggctgcagatgcctttgtgcta 1251 Query: 1216 ccttcccgtggcgaggggtggggaaggccggtggtcgaagccatggccatggaactgcca 1275 || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 1252 ccatcccgtggtgaggggtggggcaggccggtggtcgaagccatgtccatggaactgccg 1311 Query: 1276 gttattgtgacaaattggtcaggctcaacagagtacctgactgaagagaatgggtaccca 1335 || |||||||| ||||||||||| ||||||||||| ||| ||| ||||||||||||||| Sbjct: 1312 gtgattgtgacgaattggtcaggtccaacagagtacttgaatgaggagaatgggtaccca 1371 Query: 1336 ctggacgtggacaggctgactgaggtcacagaagggccattcaagggtcatctctgcgct 1395 ||||| | |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1372 ttggacattgacaggctgactgaggtcacagaagggccatttaagggtcatctctgtgct 1431 Query: 1396 gagccatcagttgatcatctgagagctttgatgaggcgtgtctttggtgatcaggaggag 1455 |||||||| || |||| ||||| |||||||||| | ||| || |||||| || || Sbjct: 1432 gagccatctgtcgatcggctgaggactttgatgagacatgtattcagtgatcgagaagaa 1491 Query: 1456 gcgaggagaaaagggaggaaggcaagggaagacatggtcgagaggttttcgccagaggtt 1515 |||||||||||||| | |||||||||||| || ||||| ||||||||||| |||| | Sbjct: 1492 gcgaggagaaaaggtaagaaggcaagggaggatatggttgagaggttttcaccagcaatc 1551 Query: 1516 gtggcaaggattgttgctgatcagatacaacaggtggttgtcagtacttagtagatggat 1575 || |||| ||||||||||||| |||||||||||| | ||| ||||||||||||||||||| Sbjct: 1552 gttgcaacgattgttgctgataagatacaacaggcgcttgccagtacttagtagatggat 1611 Query: 1576 aaccgaaatctgatcacaaa 1595 ||| ||||| |||| ||||| Sbjct: 1612 aactgaaatgtgattacaaa 1631 Score = 151 bits (76), Expect = 1e-32 Identities = 85/88 (96%) Strand = Plus / Plus Query: 323 gacgcccgccatgtgttctatggatggcccctttcgcctccggcggcggctactgctccg 382 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 359 gacgcccaccatgtgttctatggatggcccctttcgcctccggcggtggctactgctccg 418 Query: 383 aggcttggtcctacgtcgcctcgcttga 410 |||| ||||||||||||||||||||||| Sbjct: 419 aggcgtggtcctacgtcgcctcgcttga 446
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 1023 bits (516), Expect = 0.0 Identities = 999/1160 (86%) Strand = Plus / Plus Query: 436 gcgaacttcacgctctcaatcgcgcaccacggcgacctcgagtcgccggagttctggcag 495 ||||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||| Sbjct: 7126268 gcgaacttcacgctcgctatcgcccaccacggcgacctggagtcgccggagttctggctc 7126327 Query: 496 ggcttgcccgagcagtccaagaacttggcgtacaggctcgccactgcgcggtgtgagctc 555 |||||||||||| ||||||||||| |||| |||||||||||||| |||||||| |||||| Sbjct: 7126328 ggcttgcccgaggagtccaagaacatggcctacaggctcgccaccgcgcggtgcgagctc 7126387 Query: 556 tctcgggctgtcgttgtgtgccacagcgagcctggcgcgtggtacccgccgatgtacgag 615 || || || || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7126388 tcccgcgccgtggttgtgtgccacagcgagcctggcgcgtggtacccgccgatgtacgag 7126447 Query: 616 tctctgccttgcccgcctaccggatacgacgagccggcgttcgtcattggccggacgatg 675 || |||||||||||||| ||||| |||||||||||||| ||||||||||| || || ||| Sbjct: 7126448 tccctgccttgcccgcccaccggctacgacgagccggctttcgtcattggacgcacaatg 7126507 Query: 676 ttcgagactgaccgtgtctcgccggagcatgtcaggcgctgtaaccagatggatgctgtc 735 || ||||||||||| |||||||||||||| |||||||| || ||||||||||| || ||| Sbjct: 7126508 tttgagactgaccgcgtctcgccggagcacgtcaggcggtgcaaccagatggacgccgtc 7126567 Query: 736 tgggtaccgacagagttccacgtctccacattcgtgaagagcggggtcgatccctccaag 795 ||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||| Sbjct: 7126568 tgggtgccgacggaattccatgtgtcgacgttcgtgaagagcggggtggatccctccaag 7126627 Query: 796 gtcgtcaaggtagtgcaggccgtcgatgtcacgttctttgatccggccaagcacgtcgcc 855 ||||||||||| |||||||| || ||||| ||||| |||||||| ||||||| |||| Sbjct: 7126628 gtcgtcaaggttgtgcaggctgtggatgtaggattcttcgatccggcgaagcacgccgcc 7126687 Query: 856 tttcctcttccgattggtttctctgtcatggcgcccgatgattctacatggaatcctgat 915 ||||| | ||||| ||| | |||| |||| ||| |||||||| | || | | |||| | Sbjct: 7126688 attcctttgccgatcggtgtgcctgtgatggtgcctgatgattcaagattggaccctgtt 7126747 Query: 916 agctccaaaggcaaaggttttgtgtttcttagtgtgttcaaatgggagcagaggaagggc 975 | ||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||| Sbjct: 7126748 aactccaaagggaaaggctttgtgttcctcagtgtgttcaaatgggagcagaggaagggg 7126807 Query: 976 tgggatgtgcttctgacagcctatctgcaggagttctctggagctgatgatgttgtactc 1035 ||||||||||| || | ||| | ||||||||||||||||||| ||||||||||| || Sbjct: 7126808 tgggatgtgctgctcagagctttcttgcaggagttctctggagccgatgatgttgtgctt 7126867 Query: 1036 tacctactgaccaatgcttaccactctgacactgattttggagggaaaatccacagattt 1095 |||||||||| ||||||||||||||||||||| || || | ||||||||| || || Sbjct: 7126868 tacctactgatcaatgcttaccactctgacacagacttcgataggaaaatccgtagcttc 7126927 Query: 1096 atgaacaaatccagcattgaggagccagtgctaggatgggcagaagtccgggtggttgat 1155 | || | |||||||||||| |||| || |||||||||||||| ||| || | ||| Sbjct: 7126928 gtcaaagattccagcattgagaagcctatggatggatgggcagaagttcggctgatcgat 7126987 Query: 1156 gagcatgtcccacagtccgaccttccaaggttgtacaaggctgcagatgcatttgtgcta 1215 |||||| |||||||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 7126988 gagcatatcccacagtctgctcttccaaggttgtacaaggctgcagatgcctttgtgcta 7127047 Query: 1216 ccttcccgtggcgaggggtggggaaggccggtggtcgaagccatggccatggaactgcca 1275 || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 7127048 ccatcccgtggtgaggggtggggcaggccggtggtcgaagccatgtccatggaactgccg 7127107 Query: 1276 gttattgtgacaaattggtcaggctcaacagagtacctgactgaagagaatgggtaccca 1335 || |||||||| ||||||||||| ||||||||||| ||| ||| ||||||||||||||| Sbjct: 7127108 gtgattgtgacgaattggtcaggtccaacagagtacttgaatgaggagaatgggtaccca 7127167 Query: 1336 ctggacgtggacaggctgactgaggtcacagaagggccattcaagggtcatctctgcgct 1395 ||||| | |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 7127168 ttggacattgacaggctgactgaggtcacagaagggccatttaagggtcatctctgtgct 7127227 Query: 1396 gagccatcagttgatcatctgagagctttgatgaggcgtgtctttggtgatcaggaggag 1455 |||||||| || |||| ||||| |||||||||| | ||| || |||||| || || Sbjct: 7127228 gagccatctgtcgatcggctgaggactttgatgagacatgtattcagtgatcgagaagaa 7127287 Query: 1456 gcgaggagaaaagggaggaaggcaagggaagacatggtcgagaggttttcgccagaggtt 1515 |||||||||||||| | |||||||||||| || ||||| ||||||||||| |||| | Sbjct: 7127288 gcgaggagaaaaggtaagaaggcaagggaggatatggttgagaggttttcaccagcaatc 7127347 Query: 1516 gtggcaaggattgttgctgatcagatacaacaggtggttgtcagtacttagtagatggat 1575 || |||| ||||||||||||| |||||||||||| | ||| ||||||||||||||||||| Sbjct: 7127348 gttgcaacgattgttgctgataagatacaacaggcgcttgccagtacttagtagatggat 7127407 Query: 1576 aaccgaaatctgatcacaaa 1595 ||| ||||| |||| ||||| Sbjct: 7127408 aactgaaatgtgattacaaa 7127427 Score = 151 bits (76), Expect = 1e-32 Identities = 85/88 (96%) Strand = Plus / Plus Query: 323 gacgcccgccatgtgttctatggatggcccctttcgcctccggcggcggctactgctccg 382 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 7126155 gacgcccaccatgtgttctatggatggcccctttcgcctccggcggtggctactgctccg 7126214 Query: 383 aggcttggtcctacgtcgcctcgcttga 410 |||| ||||||||||||||||||||||| Sbjct: 7126215 aggcgtggtcctacgtcgcctcgcttga 7126242
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 1023 bits (516), Expect = 0.0 Identities = 999/1160 (86%) Strand = Plus / Plus Query: 436 gcgaacttcacgctctcaatcgcgcaccacggcgacctcgagtcgccggagttctggcag 495 ||||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||| Sbjct: 78347 gcgaacttcacgctcgctatcgcccaccacggcgacctggagtcgccggagttctggctc 78406 Query: 496 ggcttgcccgagcagtccaagaacttggcgtacaggctcgccactgcgcggtgtgagctc 555 |||||||||||| ||||||||||| |||| |||||||||||||| |||||||| |||||| Sbjct: 78407 ggcttgcccgaggagtccaagaacatggcctacaggctcgccaccgcgcggtgcgagctc 78466 Query: 556 tctcgggctgtcgttgtgtgccacagcgagcctggcgcgtggtacccgccgatgtacgag 615 || || || || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78467 tcccgcgccgtggttgtgtgccacagcgagcctggcgcgtggtacccgccgatgtacgag 78526 Query: 616 tctctgccttgcccgcctaccggatacgacgagccggcgttcgtcattggccggacgatg 675 || |||||||||||||| ||||| |||||||||||||| ||||||||||| || || ||| Sbjct: 78527 tccctgccttgcccgcccaccggctacgacgagccggctttcgtcattggacgcacaatg 78586 Query: 676 ttcgagactgaccgtgtctcgccggagcatgtcaggcgctgtaaccagatggatgctgtc 735 || ||||||||||| |||||||||||||| |||||||| || ||||||||||| || ||| Sbjct: 78587 tttgagactgaccgcgtctcgccggagcacgtcaggcggtgcaaccagatggacgccgtc 78646 Query: 736 tgggtaccgacagagttccacgtctccacattcgtgaagagcggggtcgatccctccaag 795 ||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||| Sbjct: 78647 tgggtgccgacggaattccatgtgtcgacgttcgtgaagagcggggtggatccctccaag 78706 Query: 796 gtcgtcaaggtagtgcaggccgtcgatgtcacgttctttgatccggccaagcacgtcgcc 855 ||||||||||| |||||||| || ||||| ||||| |||||||| ||||||| |||| Sbjct: 78707 gtcgtcaaggttgtgcaggctgtggatgtaggattcttcgatccggcgaagcacgccgcc 78766 Query: 856 tttcctcttccgattggtttctctgtcatggcgcccgatgattctacatggaatcctgat 915 ||||| | ||||| ||| | |||| |||| ||| |||||||| | || | | |||| | Sbjct: 78767 attcctttgccgatcggtgtgcctgtgatggtgcctgatgattcaagattggaccctgtt 78826 Query: 916 agctccaaaggcaaaggttttgtgtttcttagtgtgttcaaatgggagcagaggaagggc 975 | ||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||| Sbjct: 78827 aactccaaagggaaaggctttgtgttcctcagtgtgttcaaatgggagcagaggaagggg 78886 Query: 976 tgggatgtgcttctgacagcctatctgcaggagttctctggagctgatgatgttgtactc 1035 ||||||||||| || | ||| | ||||||||||||||||||| ||||||||||| || Sbjct: 78887 tgggatgtgctgctcagagctttcttgcaggagttctctggagccgatgatgttgtgctt 78946 Query: 1036 tacctactgaccaatgcttaccactctgacactgattttggagggaaaatccacagattt 1095 |||||||||| ||||||||||||||||||||| || || | ||||||||| || || Sbjct: 78947 tacctactgatcaatgcttaccactctgacacagacttcgataggaaaatccgtagcttc 79006 Query: 1096 atgaacaaatccagcattgaggagccagtgctaggatgggcagaagtccgggtggttgat 1155 | || | |||||||||||| |||| || |||||||||||||| ||| || | ||| Sbjct: 79007 gtcaaagattccagcattgagaagcctatggatggatgggcagaagttcggctgatcgat 79066 Query: 1156 gagcatgtcccacagtccgaccttccaaggttgtacaaggctgcagatgcatttgtgcta 1215 |||||| |||||||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 79067 gagcatatcccacagtctgctcttccaaggttgtacaaggctgcagatgcctttgtgcta 79126 Query: 1216 ccttcccgtggcgaggggtggggaaggccggtggtcgaagccatggccatggaactgcca 1275 || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 79127 ccatcccgtggtgaggggtggggcaggccggtggtcgaagccatgtccatggaactgccg 79186 Query: 1276 gttattgtgacaaattggtcaggctcaacagagtacctgactgaagagaatgggtaccca 1335 || |||||||| ||||||||||| ||||||||||| ||| ||| ||||||||||||||| Sbjct: 79187 gtgattgtgacgaattggtcaggtccaacagagtacttgaatgaggagaatgggtaccca 79246 Query: 1336 ctggacgtggacaggctgactgaggtcacagaagggccattcaagggtcatctctgcgct 1395 ||||| | |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 79247 ttggacattgacaggctgactgaggtcacagaagggccatttaagggtcatctctgtgct 79306 Query: 1396 gagccatcagttgatcatctgagagctttgatgaggcgtgtctttggtgatcaggaggag 1455 |||||||| || |||| ||||| |||||||||| | ||| || |||||| || || Sbjct: 79307 gagccatctgtcgatcggctgaggactttgatgagacatgtattcagtgatcgagaagaa 79366 Query: 1456 gcgaggagaaaagggaggaaggcaagggaagacatggtcgagaggttttcgccagaggtt 1515 |||||||||||||| | |||||||||||| || ||||| ||||||||||| |||| | Sbjct: 79367 gcgaggagaaaaggtaagaaggcaagggaggatatggttgagaggttttcaccagcaatc 79426 Query: 1516 gtggcaaggattgttgctgatcagatacaacaggtggttgtcagtacttagtagatggat 1575 || |||| ||||||||||||| |||||||||||| | ||| ||||||||||||||||||| Sbjct: 79427 gttgcaacgattgttgctgataagatacaacaggcgcttgccagtacttagtagatggat 79486 Query: 1576 aaccgaaatctgatcacaaa 1595 ||| ||||| |||| ||||| Sbjct: 79487 aactgaaatgtgattacaaa 79506 Score = 151 bits (76), Expect = 1e-32 Identities = 85/88 (96%) Strand = Plus / Plus Query: 323 gacgcccgccatgtgttctatggatggcccctttcgcctccggcggcggctactgctccg 382 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 78234 gacgcccaccatgtgttctatggatggcccctttcgcctccggcggtggctactgctccg 78293 Query: 383 aggcttggtcctacgtcgcctcgcttga 410 |||| ||||||||||||||||||||||| Sbjct: 78294 aggcgtggtcctacgtcgcctcgcttga 78321
>dbj|AK121536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031D23, full insert sequence Length = 2052 Score = 1023 bits (516), Expect = 0.0 Identities = 999/1160 (86%) Strand = Plus / Plus Query: 436 gcgaacttcacgctctcaatcgcgcaccacggcgacctcgagtcgccggagttctggcag 495 ||||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||| Sbjct: 743 gcgaacttcacgctcgctatcgcccaccacggcgacctggagtcgccggagttctggctc 802 Query: 496 ggcttgcccgagcagtccaagaacttggcgtacaggctcgccactgcgcggtgtgagctc 555 |||||||||||| ||||||||||| |||| |||||||||||||| |||||||| |||||| Sbjct: 803 ggcttgcccgaggagtccaagaacatggcctacaggctcgccaccgcgcggtgcgagctc 862 Query: 556 tctcgggctgtcgttgtgtgccacagcgagcctggcgcgtggtacccgccgatgtacgag 615 || || || || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 863 tcccgcgccgtggttgtgtgccacagcgagcctggcgcgtggtacccgccgatgtacgag 922 Query: 616 tctctgccttgcccgcctaccggatacgacgagccggcgttcgtcattggccggacgatg 675 || |||||||||||||| ||||| |||||||||||||| ||||||||||| || || ||| Sbjct: 923 tccctgccttgcccgcccaccggctacgacgagccggctttcgtcattggacgcacaatg 982 Query: 676 ttcgagactgaccgtgtctcgccggagcatgtcaggcgctgtaaccagatggatgctgtc 735 || ||||||||||| |||||||||||||| |||||||| || ||||||||||| || ||| Sbjct: 983 tttgagactgaccgcgtctcgccggagcacgtcaggcggtgcaaccagatggacgccgtc 1042 Query: 736 tgggtaccgacagagttccacgtctccacattcgtgaagagcggggtcgatccctccaag 795 ||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||| Sbjct: 1043 tgggtgccgacggaattccatgtgtcgacgttcgtgaagagcggggtggatccctccaag 1102 Query: 796 gtcgtcaaggtagtgcaggccgtcgatgtcacgttctttgatccggccaagcacgtcgcc 855 ||||||||||| |||||||| || ||||| ||||| |||||||| ||||||| |||| Sbjct: 1103 gtcgtcaaggttgtgcaggctgtggatgtaggattcttcgatccggcgaagcacgccgcc 1162 Query: 856 tttcctcttccgattggtttctctgtcatggcgcccgatgattctacatggaatcctgat 915 ||||| | ||||| ||| | |||| |||| ||| |||||||| | || | | |||| | Sbjct: 1163 attcctttgccgatcggtgtgcctgtgatggtgcctgatgattcaagattggaccctgtt 1222 Query: 916 agctccaaaggcaaaggttttgtgtttcttagtgtgttcaaatgggagcagaggaagggc 975 | ||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||| Sbjct: 1223 aactccaaagggaaaggctttgtgttcctcagtgtgttcaaatgggagcagaggaagggg 1282 Query: 976 tgggatgtgcttctgacagcctatctgcaggagttctctggagctgatgatgttgtactc 1035 ||||||||||| || | ||| | ||||||||||||||||||| ||||||||||| || Sbjct: 1283 tgggatgtgctgctcagagctttcttgcaggagttctctggagccgatgatgttgtgctt 1342 Query: 1036 tacctactgaccaatgcttaccactctgacactgattttggagggaaaatccacagattt 1095 |||||||||| ||||||||||||||||||||| || || | ||||||||| || || Sbjct: 1343 tacctactgatcaatgcttaccactctgacacagacttcgataggaaaatccgtagcttc 1402 Query: 1096 atgaacaaatccagcattgaggagccagtgctaggatgggcagaagtccgggtggttgat 1155 | || | |||||||||||| |||| || |||||||||||||| ||| || | ||| Sbjct: 1403 gtcaaagattccagcattgagaagcctatggatggatgggcagaagttcggctgatcgat 1462 Query: 1156 gagcatgtcccacagtccgaccttccaaggttgtacaaggctgcagatgcatttgtgcta 1215 |||||| |||||||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1463 gagcatatcccacagtctgctcttccaaggttgtacaaggctgcagatgcctttgtgcta 1522 Query: 1216 ccttcccgtggcgaggggtggggaaggccggtggtcgaagccatggccatggaactgcca 1275 || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 1523 ccatcccgtggtgaggggtggggcaggccggtggtcgaagccatgtccatggaactgccg 1582 Query: 1276 gttattgtgacaaattggtcaggctcaacagagtacctgactgaagagaatgggtaccca 1335 || |||||||| ||||||||||| ||||||||||| ||| ||| ||||||||||||||| Sbjct: 1583 gtgattgtgacgaattggtcaggtccaacagagtacttgaatgaggagaatgggtaccca 1642 Query: 1336 ctggacgtggacaggctgactgaggtcacagaagggccattcaagggtcatctctgcgct 1395 ||||| | |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1643 ttggacattgacaggctgactgaggtcacagaagggccatttaagggtcatctctgtgct 1702 Query: 1396 gagccatcagttgatcatctgagagctttgatgaggcgtgtctttggtgatcaggaggag 1455 |||||||| || |||| ||||| |||||||||| | ||| || |||||| || || Sbjct: 1703 gagccatctgtcgatcggctgaggactttgatgagacatgtattcagtgatcgagaagaa 1762 Query: 1456 gcgaggagaaaagggaggaaggcaagggaagacatggtcgagaggttttcgccagaggtt 1515 |||||||||||||| | |||||||||||| || ||||| ||||||||||| |||| | Sbjct: 1763 gcgaggagaaaaggtaagaaggcaagggaggatatggttgagaggttttcaccagcaatc 1822 Query: 1516 gtggcaaggattgttgctgatcagatacaacaggtggttgtcagtacttagtagatggat 1575 || |||| ||||||||||||| |||||||||||| | ||| ||||||||||||||||||| Sbjct: 1823 gttgcaacgattgttgctgataagatacaacaggcgcttgccagtacttagtagatggat 1882 Query: 1576 aaccgaaatctgatcacaaa 1595 ||| ||||| |||| ||||| Sbjct: 1883 aactgaaatgtgattacaaa 1902 Score = 151 bits (76), Expect = 1e-32 Identities = 85/88 (96%) Strand = Plus / Plus Query: 323 gacgcccgccatgtgttctatggatggcccctttcgcctccggcggcggctactgctccg 382 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 630 gacgcccaccatgtgttctatggatggcccctttcgcctccggcggtggctactgctccg 689 Query: 383 aggcttggtcctacgtcgcctcgcttga 410 |||| ||||||||||||||||||||||| Sbjct: 690 aggcgtggtcctacgtcgcctcgcttga 717
>dbj|AK070245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044M15, full insert sequence Length = 1885 Score = 1023 bits (516), Expect = 0.0 Identities = 999/1160 (86%) Strand = Plus / Plus Query: 436 gcgaacttcacgctctcaatcgcgcaccacggcgacctcgagtcgccggagttctggcag 495 ||||||||||||||| | ||||| |||||||||||||| ||||||||||||||||||| Sbjct: 473 gcgaacttcacgctcgctatcgcccaccacggcgacctggagtcgccggagttctggctc 532 Query: 496 ggcttgcccgagcagtccaagaacttggcgtacaggctcgccactgcgcggtgtgagctc 555 |||||||||||| ||||||||||| |||| |||||||||||||| |||||||| |||||| Sbjct: 533 ggcttgcccgaggagtccaagaacatggcctacaggctcgccaccgcgcggtgcgagctc 592 Query: 556 tctcgggctgtcgttgtgtgccacagcgagcctggcgcgtggtacccgccgatgtacgag 615 || || || || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 tcccgcgccgtggttgtgtgccacagcgagcctggcgcgtggtacccgccgatgtacgag 652 Query: 616 tctctgccttgcccgcctaccggatacgacgagccggcgttcgtcattggccggacgatg 675 || |||||||||||||| ||||| |||||||||||||| ||||||||||| || || ||| Sbjct: 653 tccctgccttgcccgcccaccggctacgacgagccggctttcgtcattggacgcacaatg 712 Query: 676 ttcgagactgaccgtgtctcgccggagcatgtcaggcgctgtaaccagatggatgctgtc 735 || ||||||||||| |||||||||||||| |||||||| || ||||||||||| || ||| Sbjct: 713 tttgagactgaccgcgtctcgccggagcacgtcaggcggtgcaaccagatggacgccgtc 772 Query: 736 tgggtaccgacagagttccacgtctccacattcgtgaagagcggggtcgatccctccaag 795 ||||| ||||| || ||||| || || || ||||||||||||||||| |||||||||||| Sbjct: 773 tgggtgccgacggaattccatgtgtcgacgttcgtgaagagcggggtggatccctccaag 832 Query: 796 gtcgtcaaggtagtgcaggccgtcgatgtcacgttctttgatccggccaagcacgtcgcc 855 ||||||||||| |||||||| || ||||| ||||| |||||||| ||||||| |||| Sbjct: 833 gtcgtcaaggttgtgcaggctgtggatgtaggattcttcgatccggcgaagcacgccgcc 892 Query: 856 tttcctcttccgattggtttctctgtcatggcgcccgatgattctacatggaatcctgat 915 ||||| | ||||| ||| | |||| |||| ||| |||||||| | || | | |||| | Sbjct: 893 attcctttgccgatcggtgtgcctgtgatggtgcctgatgattcaagattggaccctgtt 952 Query: 916 agctccaaaggcaaaggttttgtgtttcttagtgtgttcaaatgggagcagaggaagggc 975 | ||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||| Sbjct: 953 aactccaaagggaaaggctttgtgttcctcagtgtgttcaaatgggagcagaggaagggg 1012 Query: 976 tgggatgtgcttctgacagcctatctgcaggagttctctggagctgatgatgttgtactc 1035 ||||||||||| || | ||| | ||||||||||||||||||| ||||||||||| || Sbjct: 1013 tgggatgtgctgctcagagctttcttgcaggagttctctggagccgatgatgttgtgctt 1072 Query: 1036 tacctactgaccaatgcttaccactctgacactgattttggagggaaaatccacagattt 1095 |||||||||| ||||||||||||||||||||| || || | ||||||||| || || Sbjct: 1073 tacctactgatcaatgcttaccactctgacacagacttcgataggaaaatccgtagcttc 1132 Query: 1096 atgaacaaatccagcattgaggagccagtgctaggatgggcagaagtccgggtggttgat 1155 | || | |||||||||||| |||| || |||||||||||||| ||| || | ||| Sbjct: 1133 gtcaaagattccagcattgagaagcctatggatggatgggcagaagttcggctgatcgat 1192 Query: 1156 gagcatgtcccacagtccgaccttccaaggttgtacaaggctgcagatgcatttgtgcta 1215 |||||| |||||||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1193 gagcatatcccacagtctgctcttccaaggttgtacaaggctgcagatgcctttgtgcta 1252 Query: 1216 ccttcccgtggcgaggggtggggaaggccggtggtcgaagccatggccatggaactgcca 1275 || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 1253 ccatcccgtggtgaggggtggggcaggccggtggtcgaagccatgtccatggaactgccg 1312 Query: 1276 gttattgtgacaaattggtcaggctcaacagagtacctgactgaagagaatgggtaccca 1335 || |||||||| ||||||||||| ||||||||||| ||| ||| ||||||||||||||| Sbjct: 1313 gtgattgtgacgaattggtcaggtccaacagagtacttgaatgaggagaatgggtaccca 1372 Query: 1336 ctggacgtggacaggctgactgaggtcacagaagggccattcaagggtcatctctgcgct 1395 ||||| | |||||||||||||||||||||||||||||||| |||||||||||||| ||| Sbjct: 1373 ttggacattgacaggctgactgaggtcacagaagggccatttaagggtcatctctgtgct 1432 Query: 1396 gagccatcagttgatcatctgagagctttgatgaggcgtgtctttggtgatcaggaggag 1455 |||||||| || |||| ||||| |||||||||| | ||| || |||||| || || Sbjct: 1433 gagccatctgtcgatcggctgaggactttgatgagacatgtattcagtgatcgagaagaa 1492 Query: 1456 gcgaggagaaaagggaggaaggcaagggaagacatggtcgagaggttttcgccagaggtt 1515 |||||||||||||| | |||||||||||| || ||||| ||||||||||| |||| | Sbjct: 1493 gcgaggagaaaaggtaagaaggcaagggaggatatggttgagaggttttcaccagcaatc 1552 Query: 1516 gtggcaaggattgttgctgatcagatacaacaggtggttgtcagtacttagtagatggat 1575 || |||| ||||||||||||| |||||||||||| | ||| ||||||||||||||||||| Sbjct: 1553 gttgcaacgattgttgctgataagatacaacaggcgcttgccagtacttagtagatggat 1612 Query: 1576 aaccgaaatctgatcacaaa 1595 ||| ||||| |||| ||||| Sbjct: 1613 aactgaaatgtgattacaaa 1632 Score = 151 bits (76), Expect = 1e-32 Identities = 85/88 (96%) Strand = Plus / Plus Query: 323 gacgcccgccatgtgttctatggatggcccctttcgcctccggcggcggctactgctccg 382 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 360 gacgcccaccatgtgttctatggatggcccctttcgcctccggcggtggctactgctccg 419 Query: 383 aggcttggtcctacgtcgcctcgcttga 410 |||| ||||||||||||||||||||||| Sbjct: 420 aggcgtggtcctacgtcgcctcgcttga 447
>ref|NM_111899.2| Arabidopsis thaliana transferase, transferring glycosyl groups (AT3G10630) mRNA, complete cds Length = 1749 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 946 agtgtgttcaaatgggagcagaggaagggctgggatgt 983 |||||||| ||||||||||||||||| || |||||||| Sbjct: 861 agtgtgtttaaatgggagcagaggaaaggttgggatgt 898
>gb|AC013428.6|ATAC013428 Arabidopsis thaliana chromosome III BAC F18K10 genomic sequence, complete sequence Length = 93985 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Minus Query: 946 agtgtgttcaaatgggagcagaggaagggctgggatgt 983 |||||||| ||||||||||||||||| || |||||||| Sbjct: 79511 agtgtgtttaaatgggagcagaggaaaggttgggatgt 79474
>gb|BT000324.1| Arabidopsis thaliana unknown protein (At3g10630) mRNA, complete cds Length = 1508 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 946 agtgtgttcaaatgggagcagaggaagggctgggatgt 983 |||||||| ||||||||||||||||| || |||||||| Sbjct: 835 agtgtgtttaaatgggagcagaggaaaggttgggatgt 872
>gb|AY099710.1| Arabidopsis thaliana unknown protein (At3g10630) mRNA, complete cds Length = 1595 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 946 agtgtgttcaaatgggagcagaggaagggctgggatgt 983 |||||||| ||||||||||||||||| || |||||||| Sbjct: 861 agtgtgtttaaatgggagcagaggaaaggttgggatgt 898
>gb|AY085762.1| Arabidopsis thaliana clone 17844 mRNA, complete sequence Length = 1748 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 946 agtgtgttcaaatgggagcagaggaagggctgggatgt 983 |||||||| ||||||||||||||||| || |||||||| Sbjct: 859 agtgtgtttaaatgggagcagaggaaaggttgggatgt 896
>gb|AC011560.6|AC011560 Arabidopsis thaliana chromosome 3 BAC F13M14 genomic sequence, complete sequence Length = 118107 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 946 agtgtgttcaaatgggagcagaggaagggctgggatgt 983 |||||||| ||||||||||||||||| || |||||||| Sbjct: 25006 agtgtgtttaaatgggagcagaggaaaggttgggatgt 25043
>emb|BX824292.1|CNS0A4XI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZB05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1589 Score = 52.0 bits (26), Expect = 0.007 Identities = 35/38 (92%) Strand = Plus / Plus Query: 946 agtgtgttcaaatgggagcagaggaagggctgggatgt 983 |||||||| ||||||||||||||||| || |||||||| Sbjct: 728 agtgtgtttaaatgggagcagaggaaaggttgggatgt 765
>gb|AC166325.1| Mus musculus BAC clone RP24-421O23 from chromosome 13, complete sequence Length = 192167 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1801 gttagttttttatcaacttgacat 1824 |||||||||||||||||||||||| Sbjct: 130409 gttagttttttatcaacttgacat 130432
>gb|AC154257.2| Mus musculus BAC clone RP24-211E15 from chromosome 13, complete sequence Length = 152267 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 1801 gttagttttttatcaacttgacat 1824 |||||||||||||||||||||||| Sbjct: 8824 gttagttttttatcaacttgacat 8847
>emb|AL606985.26| Mouse DNA sequence from clone RP23-153M14 on chromosome 4, complete sequence Length = 193947 Score = 46.1 bits (23), Expect = 0.45 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1801 gttagttttttatcaacttgaca 1823 ||||||||||||||||||||||| Sbjct: 121331 gttagttttttatcaacttgaca 121309
>emb|AM393487.1| Synthetic construct Homo sapiens mRNA for hypothetical protein (RSHL1 gene), clone DKFZp434I0515.1E3 Length = 2193 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 cctcctcgccctcgtcctcgccgtgc 205 ||||||||||||| |||||||||||| Sbjct: 1203 cctcctcgccctcctcctcgccgtgc 1178
>ref|XM_001224474.1| Chaetomium globosum CBS 148.51 predicted protein (CHGG_05261) mRNA, partial cds Length = 1179 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 178 tccctcctcgccctcgtcctcg 199 |||||||||||||||||||||| Sbjct: 1128 tccctcctcgccctcgtcctcg 1107
>ref|NM_030785.2| Homo sapiens radial spokehead-like 1 (RSHL1), mRNA Length = 2477 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 cctcctcgccctcgtcctcgccgtgc 205 ||||||||||||| |||||||||||| Sbjct: 1326 cctcctcgccctcctcctcgccgtgc 1301
>ref|XM_524308.2| PREDICTED: Pan troglodytes radial spokehead-like 1 (RSHL1), mRNA Length = 2484 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 cctcctcgccctcgtcctcgccgtgc 205 ||||||||||||| |||||||||||| Sbjct: 1354 cctcctcgccctcctcctcgccgtgc 1329
>ref|XM_001118592.1| PREDICTED: Macaca mulatta similar to radial spokehead-like 1 (LOC722443), partial mRNA Length = 765 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 cctcctcgccctcgtcctcgccgtgc 205 ||||||||||||| |||||||||||| Sbjct: 295 cctcctcgccctcctcctcgccgtgc 270
>ref|XM_591917.2| PREDICTED: Bos taurus similar to Protein C10orf92 (LOC514117), mRNA Length = 3048 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 960 ggagcagaggaagggctgggat 981 |||||||||||||||||||||| Sbjct: 1503 ggagcagaggaagggctgggat 1524
>gb|BC057785.1| Homo sapiens radial spokehead-like 1, mRNA (cDNA clone IMAGE:5270908), partial cds Length = 2327 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 cctcctcgccctcgtcctcgccgtgc 205 ||||||||||||| |||||||||||| Sbjct: 1182 cctcctcgccctcctcctcgccgtgc 1157
>dbj|AK093068.1| Homo sapiens cDNA FLJ35749 fis, clone TESTI2004490, moderately similar to Strongylocentrotus purpuratus radial spokehead mRNA Length = 1750 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 cctcctcgccctcgtcctcgccgtgc 205 ||||||||||||| |||||||||||| Sbjct: 624 cctcctcgccctcctcctcgccgtgc 599
>gb|AC011530.6| Homo sapiens chromosome 19 clone LLNLR-227G9, complete sequence Length = 45572 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 cctcctcgccctcgtcctcgccgtgc 205 ||||||||||||| |||||||||||| Sbjct: 4187 cctcctcgccctcctcctcgccgtgc 4162
>dbj|AB179489.1| Macaca fascicularis testis cDNA clone: QtsA-21489, similar to human radial spokehead-like 1 (RSHL1), mRNA, RefSeq: NM_030785.1 Length = 2412 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 cctcctcgccctcgtcctcgccgtgc 205 ||||||||||||| |||||||||||| Sbjct: 1265 cctcctcgccctcctcctcgccgtgc 1240
>gb|AC091429.3| Homo sapiens chromosome 5 clone CTD-2161E19, complete sequence Length = 51428 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1683 gagttatttgtagtagtttctg 1704 |||||||||||||||||||||| Sbjct: 442 gagttatttgtagtagtttctg 463
>gb|AC092301.2| Homo sapiens chromosome 19 clone LLNLF-198C12, complete sequence Length = 38888 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Plus Query: 180 cctcctcgccctcgtcctcgccgtgc 205 ||||||||||||| |||||||||||| Sbjct: 11186 cctcctcgccctcctcctcgccgtgc 11211
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Minus Query: 481 ccggagttctggcagggcttgc 502 |||||||||||||||||||||| Sbjct: 2438152 ccggagttctggcagggcttgc 2438131
>dbj|AK223347.1| Homo sapiens mRNA for radial spokehead-like 1 variant, clone: TST05604 Length = 2371 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 cctcctcgccctcgtcctcgccgtgc 205 ||||||||||||| |||||||||||| Sbjct: 1299 cctcctcgccctcctcctcgccgtgc 1274
>emb|AL355596.21| Human DNA sequence from clone RP11-63E9 on chromosome 6, complete sequence Length = 180778 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1466 aagggaggaaggcaagggaaga 1487 |||||||||||||||||||||| Sbjct: 66060 aagggaggaaggcaagggaaga 66081
>gb|AC008539.6| Homo sapiens chromosome 5 clone CTC-493L21, complete sequence Length = 138633 Score = 44.1 bits (22), Expect = 1.8 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1683 gagttatttgtagtagtttctg 1704 |||||||||||||||||||||| Sbjct: 133783 gagttatttgtagtagtttctg 133804
>emb|AL136761.1|HSM801729 Homo sapiens mRNA; cDNA DKFZp434I0515 (from clone DKFZp434I0515) Length = 2478 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 cctcctcgccctcgtcctcgccgtgc 205 ||||||||||||| |||||||||||| Sbjct: 1326 cctcctcgccctcctcctcgccgtgc 1301
>dbj|AK098837.1| Homo sapiens cDNA FLJ25971 fis, clone TST05604 Length = 2425 Score = 44.1 bits (22), Expect = 1.8 Identities = 25/26 (96%) Strand = Plus / Minus Query: 180 cctcctcgccctcgtcctcgccgtgc 205 ||||||||||||| |||||||||||| Sbjct: 1299 cctcctcgccctcctcctcgccgtgc 1274
>gb|DQ250166.1| Calanus glacialis 26S ribosomal RNA gene, partial sequence Length = 703 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1529 ttgctgatcagatacaacagg 1549 ||||||||||||||||||||| Sbjct: 459 ttgctgatcagatacaacagg 439
>ref|XM_001224887.1| Chaetomium globosum CBS 148.51 hypothetical protein (CHGG_07232) mRNA, complete cds Length = 2664 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 cctcgccctcgtcctcgccgt 203 ||||||||||||||||||||| Sbjct: 2118 cctcgccctcgtcctcgccgt 2138
>dbj|AK240942.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065042F01, full insert sequence Length = 2106 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccacctccttctcctcctc 168 ||||||||||||||||||||| Sbjct: 1373 cgccacctccttctcctcctc 1393
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccacctccttctcctcctc 168 ||||||||||||||||||||| Sbjct: 18076807 cgccacctccttctcctcctc 18076827
>gb|BT028691.1| Gasterosteus aculeatus clone CNB282-C04 mRNA sequence Length = 2172 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1142 tccgggtggttgatgagcatg 1162 ||||||||||||||||||||| Sbjct: 615 tccgggtggttgatgagcatg 595
>emb|CT827814.2| Pan troglodytes chromosome X clone CH251-306B17 map Xq28, complete sequence Length = 163866 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 959 gggagcagaggaagggctggg 979 ||||||||||||||||||||| Sbjct: 150273 gggagcagaggaagggctggg 150293
>gb|AC148873.2| Chlamydomonas reinhardtii clone cr-7K15, complete sequence Length = 42238 Score = 42.1 bits (21), Expect = 7.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 179 ccctcctcgccctcgtcctcgccgtgctc 207 ||||||||||||||| |||||||| |||| Sbjct: 37443 ccctcctcgccctcgccctcgccgcgctc 37471
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 797 tcgtcaaggtagtgcaggccg 817 ||||||||||||||||||||| Sbjct: 2776069 tcgtcaaggtagtgcaggccg 2776089
>gb|AC159035.2| Pan troglodytes BAC clone CH251-297P8 from chromosome unknown, complete sequence Length = 207834 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 959 gggagcagaggaagggctggg 979 ||||||||||||||||||||| Sbjct: 177250 gggagcagaggaagggctggg 177270
>gb|AC162446.2| Mus musculus chromosome 8, clone RP23-410L16, complete sequence Length = 197906 Score = 42.1 bits (21), Expect = 7.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1800 tgttagttttttatcaacttgacat 1824 |||||||||||| |||||||||||| Sbjct: 179164 tgttagttttttgtcaacttgacat 179140
>gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0062C05 map S21174S, complete sequence Length = 178867 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccacctccttctcctcctc 168 ||||||||||||||||||||| Sbjct: 90744 cgccacctccttctcctcctc 90764
>ref|NM_004992.2| Homo sapiens methyl CpG binding protein 2 (Rett syndrome) (MECP2), mRNA gb|AF158180.1| Homo sapiens methyl CpG binding protein 2 (MECP2) mRNA, complete cds Length = 10182 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 959 gggagcagaggaagggctggg 979 ||||||||||||||||||||| Sbjct: 3435 gggagcagaggaagggctggg 3415
>gb|AC120003.6| Mus musculus chromosome 8, clone RP24-148H22, complete sequence Length = 210466 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1803 tagttttttatcaacttgaca 1823 ||||||||||||||||||||| Sbjct: 11534 tagttttttatcaacttgaca 11514
>gb|AC136216.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022J22, complete sequence Length = 142854 Score = 42.1 bits (21), Expect = 7.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 ctcctcctcacggcgccgtccctcc 184 ||||||||||||||||| ||||||| Sbjct: 122790 ctcctcctcacggcgccctccctcc 122814
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08, complete sequence Length = 142196 Score = 42.1 bits (21), Expect = 7.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 ctcctcctcacggcgccgtccctcc 184 ||||||||||||||||| ||||||| Sbjct: 17988 ctcctcctcacggcgccctccctcc 18012
>gb|AC140774.7| Medicago truncatula clone mth2-5e11, complete sequence Length = 116998 Score = 42.1 bits (21), Expect = 7.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1458 gaggagaaaagggaggaaggcaagggaag 1486 ||||||||| |||||| |||||||||||| Sbjct: 19282 gaggagaaatgggagggaggcaagggaag 19254
>gb|AC125223.3| Mus musculus BAC clone RP23-31C10 from 13, complete sequence Length = 221903 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1803 tagttttttatcaacttgaca 1823 ||||||||||||||||||||| Sbjct: 30282 tagttttttatcaacttgaca 30262
>gb|AF030876.2| Homo sapiens chromosome X clone Qc-8D3, RP4-671D9, I104-219D, L110-C1837 map q28, complete sequence Length = 112752 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 959 gggagcagaggaagggctggg 979 ||||||||||||||||||||| Sbjct: 20032 gggagcagaggaagggctggg 20052
>gb|AC122004.2| Mus musculus BAC clone RP24-337O4 from 18, complete sequence Length = 133247 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1801 gttagttttttatcaacttga 1821 ||||||||||||||||||||| Sbjct: 115338 gttagttttttatcaacttga 115358
>gb|AC023484.5| Homo sapiens chromosome 3 clone RP11-454F24 map 3p, complete sequence Length = 192875 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1192 aaggctgcagatgcatttgtg 1212 ||||||||||||||||||||| Sbjct: 121417 aaggctgcagatgcatttgtg 121397
>gb|AC024167.6| Homo sapiens chromosome 3 clone RP11-453F3 map 3p, complete sequence Length = 188719 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1192 aaggctgcagatgcatttgtg 1212 ||||||||||||||||||||| Sbjct: 53649 aaggctgcagatgcatttgtg 53629
>ref|XM_541269.2| PREDICTED: Canis familiaris similar to RAS and EF hand domain containing (LOC484152), mRNA Length = 2852 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 tcctcgccctcgtcctcgccg 202 ||||||||||||||||||||| Sbjct: 344 tcctcgccctcgtcctcgccg 324
>gb|AC115873.8| Mus musculus, clone RP24-349F22, complete sequence Length = 159466 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1801 gttagttttttatcaacttga 1821 ||||||||||||||||||||| Sbjct: 140757 gttagttttttatcaacttga 140737
>gb|AC119909.12| Mus musculus chromosome 8, clone RP24-241I4, complete sequence Length = 150332 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1803 tagttttttatcaacttgaca 1823 ||||||||||||||||||||| Sbjct: 1669 tagttttttatcaacttgaca 1689
>tpg|BK003185.1| TPA_inf: Drosophila melanogaster HDC19511 (HDC19511) gene, complete cds Length = 1394 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccacctccttctcctcctc 168 ||||||||||||||||||||| Sbjct: 1325 cgccacctccttctcctcctc 1345
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccacctccttctcctcctc 168 ||||||||||||||||||||| Sbjct: 18795323 cgccacctccttctcctcctc 18795343
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccacctccttctcctcctc 168 ||||||||||||||||||||| Sbjct: 20189578 cgccacctccttctcctcctc 20189598
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 42.1 bits (21), Expect = 7.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 160 ctcctcctcacggcgccgtccctcc 184 ||||||||||||||||| ||||||| Sbjct: 29239331 ctcctcctcacggcgccctccctcc 29239355
>emb|AL589862.28| Human DNA sequence from clone GS1-165F21 on chromosome 10 Contains the 5' end of the PAX2 gene for paired box gene 2 and fifteen CpG islands, complete sequence Length = 187101 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1458 gaggagaaaagggaggaaggc 1478 ||||||||||||||||||||| Sbjct: 138340 gaggagaaaagggaggaaggc 138360
>dbj|AB209464.1| Homo sapiens mRNA for methyl CpG binding protein 2 variant protein Length = 5941 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 959 gggagcagaggaagggctggg 979 ||||||||||||||||||||| Sbjct: 2200 gggagcagaggaagggctggg 2180
>emb|AL160006.16| Human DNA sequence from clone RP4-773N10 on chromosome 1p13.1-13.3 Contains the 3' end of gene KIAA1761 (FLJ14743) and the ALX3 gene for aristaless-like homeobox 3, complete sequence Length = 91783 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1466 aagggaggaaggcaagggaag 1486 ||||||||||||||||||||| Sbjct: 10227 aagggaggaaggcaagggaag 10207
>gb|AC011614.8| Drosophila melanogaster, chromosome X, region 16F-17A, BAC clone BACR48L05, complete sequence Length = 177138 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cgccacctccttctcctcctc 168 ||||||||||||||||||||| Sbjct: 55708 cgccacctccttctcctcctc 55688
>gb|AF385471.1|AF385471 Neocalanus plumchrus flemingeri 28S ribosomal RNA gene, partial sequence Length = 710 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1529 ttgctgatcagatacaacagg 1549 ||||||||||||||||||||| Sbjct: 465 ttgctgatcagatacaacagg 445
>gb|AF385470.1|AF385470 Neocalanus cristatus 28S ribosomal RNA gene, partial sequence Length = 710 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1529 ttgctgatcagatacaacagg 1549 ||||||||||||||||||||| Sbjct: 465 ttgctgatcagatacaacagg 445
>gb|AF385466.1|AF385466 Calanus marshallae glacialis 28S ribosomal RNA gene, partial sequence Length = 710 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1529 ttgctgatcagatacaacagg 1549 ||||||||||||||||||||| Sbjct: 465 ttgctgatcagatacaacagg 445
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cgccacctccttctcctcctc 168 ||||||||||||||||||||| Sbjct: 55364 cgccacctccttctcctcctc 55384
>gb|AC019302.14| Mus musculus chromosome 8, clone RP23-428G22, complete sequence Length = 241836 Score = 42.1 bits (21), Expect = 7.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1800 tgttagttttttatcaacttgacat 1824 |||||||||||| |||||||||||| Sbjct: 222653 tgttagttttttgtcaacttgacat 222677
>ref|XM_565288.1| Anopheles gambiae str. PEST ENSANGP00000029656 (ENSANGG00000023204), partial mRNA Length = 1488 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 143 ccaagcgccacctccttctcc 163 ||||||||||||||||||||| Sbjct: 1430 ccaagcgccacctccttctcc 1410
>ref|XM_317935.2| Anopheles gambiae str. PEST ENSANGP00000004967 (ENSANGG00000003847), partial mRNA Length = 1350 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 tcgccctcgtcctcgccgtgc 205 ||||||||||||||||||||| Sbjct: 545 tcgccctcgtcctcgccgtgc 525
>ref|XM_307093.2| Anopheles gambiae str. PEST ENSANGP00000012041 (ENSANGG00000009552), partial mRNA Length = 1128 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 185 tcgccctcgtcctcgccgtgc 205 ||||||||||||||||||||| Sbjct: 332 tcgccctcgtcctcgccgtgc 312
>emb|AJ132917.1|HSA132917 Homo sapiens mRNA for methyl-CpG-binding protein 2 Length = 10091 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 959 gggagcagaggaagggctggg 979 ||||||||||||||||||||| Sbjct: 3343 gggagcagaggaagggctggg 3323
>ref|XM_773870.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_480_43666_50334) partial mRNA Length = 6669 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1007 agttctctggagctgatgatg 1027 ||||||||||||||||||||| Sbjct: 6320 agttctctggagctgatgatg 6340
>emb|AL772333.5| Mouse DNA sequence from clone RP23-305E1 on chromosome 1, complete sequence Length = 142174 Score = 42.1 bits (21), Expect = 7.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1461 gagaaaagggaggaaggcaag 1481 ||||||||||||||||||||| Sbjct: 95434 gagaaaagggaggaaggcaag 95414 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 295,329,238 Number of extensions: 15914677 Number of successful extensions: 337642 Number of sequences better than 10.0: 76 Number of HSP's gapped: 337627 Number of HSP's successfully gapped: 86 Length of query: 1855 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1832 Effective length of database: 18,503,978,556 Effective search space: 33899288714592 Effective search space used: 33899288714592 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)