ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf57k23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK105899:Os08g0357000 | 555 | e-158 | 2 | AK070322:Os08g0357000 | 555 | e-158 | 3 | AK112035:Os08g0357000 | 412 | e-115 | 4 | AK065414:Os01g0702000 | 305 | 5e-83 | 5 | Os02g0794300:Os02g0794300 | 32 | 1.5 | 6 | AK099138:Os04g0675500 | 31 | 2.5 | 7 | AK067609:Os04g0675500 | 31 | 2.5 | 8 | AK102386:Os09g0398300 | 30 | 5.5 | 9 | AK063335:Os02g0699700 | 29 | 7.2 | 10 | AK119869: | 29 | 9.4 |
|---|
>AK105899:Os08g0357000 | Length = 325 Score = 555 bits (1430), Expect = e-158 Identities = 275/325 (84%), Positives = 296/325 (91%) Frame = +3 Query: 153 MAMEGTILCRPIMQAGLPAALVNNSLIKSGQLGTAILGAVSKYRNITRLVSPISQSSSKN 332 MAMEG ILCR +MQA LP +++NSL KSGQLGTA LG V KYRNITRL+SPI Q + KN Sbjct: 1 MAMEGPILCRAVMQAKLPVTMISNSLTKSGQLGTAFLGCVCKYRNITRLISPIYQPAQKN 60 Query: 333 FRPICRSFSSSSDGNGYMARNFNENDEDYVNSTVLEAVEVRSGSEGYIVKMRDGKNLLCV 512 F +C SFSSSSDGNGYMA NF+E+DEDYVNSTVLEAVEVRSG+EGY++KMRDGKNL CV Sbjct: 61 FATVCGSFSSSSDGNGYMAGNFSESDEDYVNSTVLEAVEVRSGAEGYVIKMRDGKNLRCV 120 Query: 513 HNNSQGREIPESAPQPAIVLRIEDGSGTLLPIIVLEMPSVLLMAAIRHVHIARPTIYQVV 692 HNNSQGR IPESAPQPAIVLRIEDGS TLLPIIVLEMPSVLLMAAIR+VHIARPTIYQVV Sbjct: 121 HNNSQGRNIPESAPQPAIVLRIEDGSETLLPIIVLEMPSVLLMAAIRNVHIARPTIYQVV 180 Query: 693 KELIDKMGYEVKLVRVNKRIQEAYCAELYLTKTGDQTECITFDLRPSDAINIAVRCKVPI 872 KE+IDKMGYEVKLVR+NKRIQEAYCAEL+LTK GD TE ITFDLRPSDAINIAVRCKVPI Sbjct: 181 KEMIDKMGYEVKLVRINKRIQEAYCAELFLTKVGDHTESITFDLRPSDAINIAVRCKVPI 240 Query: 873 QVHRSLAYSDGIRSVEPAKFVASAGLSDGLLFTELDRPDGQPCVEAQEFSLVRNMFIAVV 1052 QVHRSLAYSDGIRSVEPA+ +AG+SDGLLFTELDRPDGQPCVEAQEF L+RNM IA V Sbjct: 241 QVHRSLAYSDGIRSVEPARMAIAAGMSDGLLFTELDRPDGQPCVEAQEFGLIRNMLIAAV 300 Query: 1053 EERYKDAATWKDKLMKLRSKRKNWA 1127 EERYKDAATW+DKLM LRSKRKNWA Sbjct: 301 EERYKDAATWRDKLMLLRSKRKNWA 325
>AK070322:Os08g0357000 | Length = 325 Score = 555 bits (1430), Expect = e-158 Identities = 275/325 (84%), Positives = 296/325 (91%) Frame = +3 Query: 153 MAMEGTILCRPIMQAGLPAALVNNSLIKSGQLGTAILGAVSKYRNITRLVSPISQSSSKN 332 MAMEG ILCR +MQA LP +++NSL KSGQLGTA LG V KYRNITRL+SPI Q + KN Sbjct: 1 MAMEGPILCRAVMQAKLPVTMISNSLTKSGQLGTAFLGCVCKYRNITRLISPIYQPAQKN 60 Query: 333 FRPICRSFSSSSDGNGYMARNFNENDEDYVNSTVLEAVEVRSGSEGYIVKMRDGKNLLCV 512 F +C SFSSSSDGNGYMA NF+E+DEDYVNSTVLEAVEVRSG+EGY++KMRDGKNL CV Sbjct: 61 FATVCGSFSSSSDGNGYMAGNFSESDEDYVNSTVLEAVEVRSGAEGYVIKMRDGKNLRCV 120 Query: 513 HNNSQGREIPESAPQPAIVLRIEDGSGTLLPIIVLEMPSVLLMAAIRHVHIARPTIYQVV 692 HNNSQGR IPESAPQPAIVLRIEDGS TLLPIIVLEMPSVLLMAAIR+VHIARPTIYQVV Sbjct: 121 HNNSQGRNIPESAPQPAIVLRIEDGSETLLPIIVLEMPSVLLMAAIRNVHIARPTIYQVV 180 Query: 693 KELIDKMGYEVKLVRVNKRIQEAYCAELYLTKTGDQTECITFDLRPSDAINIAVRCKVPI 872 KE+IDKMGYEVKLVR+NKRIQEAYCAEL+LTK GD TE ITFDLRPSDAINIAVRCKVPI Sbjct: 181 KEMIDKMGYEVKLVRINKRIQEAYCAELFLTKVGDHTESITFDLRPSDAINIAVRCKVPI 240 Query: 873 QVHRSLAYSDGIRSVEPAKFVASAGLSDGLLFTELDRPDGQPCVEAQEFSLVRNMFIAVV 1052 QVHRSLAYSDGIRSVEPA+ +AG+SDGLLFTELDRPDGQPCVEAQEF L+RNM IA V Sbjct: 241 QVHRSLAYSDGIRSVEPARMAIAAGMSDGLLFTELDRPDGQPCVEAQEFGLIRNMLIAAV 300 Query: 1053 EERYKDAATWKDKLMKLRSKRKNWA 1127 EERYKDAATW+DKLM LRSKRKNWA Sbjct: 301 EERYKDAATWRDKLMLLRSKRKNWA 325
>AK112035:Os08g0357000 | Length = 314 Score = 412 bits (1058), Expect = e-115 Identities = 203/228 (89%), Positives = 215/228 (94%) Frame = +3 Query: 444 VEVRSGSEGYIVKMRDGKNLLCVHNNSQGREIPESAPQPAIVLRIEDGSGTLLPIIVLEM 623 VEVRSG+EGY++KMRDGKNL CVHNNSQGR IPESAPQPAIVLRIEDGS TLLPIIVLEM Sbjct: 87 VEVRSGAEGYVIKMRDGKNLRCVHNNSQGRNIPESAPQPAIVLRIEDGSETLLPIIVLEM 146 Query: 624 PSVLLMAAIRHVHIARPTIYQVVKELIDKMGYEVKLVRVNKRIQEAYCAELYLTKTGDQT 803 PSVLLMAAIR+VHIARPTIYQVVKE+IDKMGYEVKLVR+NKRIQEAYCAEL+LTK GD T Sbjct: 147 PSVLLMAAIRNVHIARPTIYQVVKEMIDKMGYEVKLVRINKRIQEAYCAELFLTKVGDHT 206 Query: 804 ECITFDLRPSDAINIAVRCKVPIQVHRSLAYSDGIRSVEPAKFVASAGLSDGLLFTELDR 983 E ITFDLRPSDAINIAVRCKVPIQVHRSLAYSDGIRSVEPA+ +AG+SDGLLFTELDR Sbjct: 207 ESITFDLRPSDAINIAVRCKVPIQVHRSLAYSDGIRSVEPARMAIAAGMSDGLLFTELDR 266 Query: 984 PDGQPCVEAQEFSLVRNMFIAVVEERYKDAATWKDKLMKLRSKRKNWA 1127 PDGQPCVEAQEF L+RNM IA VEERYKDAATW+DKLM LRSKRKNWA Sbjct: 267 PDGQPCVEAQEFGLIRNMLIAAVEERYKDAATWRDKLMLLRSKRKNWA 314
>AK065414:Os01g0702000 | Length = 331 Score = 305 bits (781), Expect = 5e-83 Identities = 146/261 (55%), Positives = 202/261 (77%) Frame = +3 Query: 339 PICRSFSSSSDGNGYMARNFNENDEDYVNSTVLEAVEVRSGSEGYIVKMRDGKNLLCVHN 518 P+C S+ SSSDG+G A +++ + E++VNS+V+EAVE+RS S+G+++KMRDGKNL CV N Sbjct: 70 PVCCSYGSSSDGDGAAAADYDASGEEFVNSSVMEAVELRSVSDGFVIKMRDGKNLRCVQN 129 Query: 519 NSQGREIPESAPQPAIVLRIEDGSGTLLPIIVLEMPSVLLMAAIRHVHIARPTIYQVVKE 698 N + + +SAP AIVL++EDGS LLPIIV+E PS++L+AA+R++ I RPTIY VVKE Sbjct: 130 NPRVLRLRDSAPHHAIVLKMEDGSDLLLPIIVMETPSIMLLAALRNIRIPRPTIYNVVKE 189 Query: 699 LIDKMGYEVKLVRVNKRIQEAYCAELYLTKTGDQTECITFDLRPSDAINIAVRCKVPIQV 878 + ++MGY V+LVR+ + + +AY + LYL K G++ E I+ DL+PSDAINIA RCKVPIQV Sbjct: 190 MTERMGYAVRLVRITEMVHDAYYSRLYLAKIGNEEETISLDLKPSDAINIAFRCKVPIQV 249 Query: 879 HRSLAYSDGIRSVEPAKFVASAGLSDGLLFTELDRPDGQPCVEAQEFSLVRNMFIAVVEE 1058 +R +AY++G++ V+P + SD +T LDRPD QPC EAQEF LVRNM +A VEE Sbjct: 250 NRRIAYNNGLKVVQPTPSESYVS-SDQFQYTRLDRPDDQPCFEAQEFDLVRNMLVAAVEE 308 Query: 1059 RYKDAATWKDKLMKLRSKRKN 1121 RYKDAA ++D+L R+K+KN Sbjct: 309 RYKDAAQYRDQLFMFRAKKKN 329
>Os02g0794300:Os02g0794300 | Length = 1369 Score = 31.6 bits (70), Expect = 1.5 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +3 Query: 897 SDGIRSVEPAKFVASAGLSDGLLFTELDRPDGQPCVEAQEFSLVRNM 1037 S +R + P + +AS G+S + FTE D V +QE S +R + Sbjct: 555 SASLRGMSPRRRLASDGISKNITFTEKDDRTMPSSVASQEISTIRRL 601
>AK099138:Os04g0675500 | Length = 721 Score = 30.8 bits (68), Expect = 2.5 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = -3 Query: 1217 WSVDMGGGVITILRTEDNMIQIEYRVKNLSGP 1122 W V +GGGV +++ D ++ EYRV + P Sbjct: 621 WMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAP 652
>AK067609:Os04g0675500 | Length = 721 Score = 30.8 bits (68), Expect = 2.5 Identities = 12/32 (37%), Positives = 19/32 (59%) Frame = -3 Query: 1217 WSVDMGGGVITILRTEDNMIQIEYRVKNLSGP 1122 W V +GGGV +++ D ++ EYRV + P Sbjct: 621 WMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAP 652
>AK102386:Os09g0398300 | Length = 222 Score = 29.6 bits (65), Expect = 5.5 Identities = 19/45 (42%), Positives = 26/45 (57%) Frame = -1 Query: 1009 ASTQGCPSGLSSSVNNKPSDRPAEATNFAGSTDLMPSLYARLLCT 875 ++ G PS SS+ ++ RP T+ GST L+PSL A LL T Sbjct: 27 STNAGTPS--SSATSSAKLTRPLSTTHVTGSTPLLPSL-ATLLAT 68
>AK063335:Os02g0699700 | Length = 773 Score = 29.3 bits (64), Expect = 7.2 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = -1 Query: 991 PSGLSSSVNNKPSDRPAEATNFAGSTDLMPSLYARLLCTCIGTL--QRTAILIASEGRRS 818 PS + + ++ ++ EA N GS+D Y LL IGTL +R LIA +GR Sbjct: 357 PSAVGAIEEDEENEESPEAAN-VGSSD-----YEYLLSMAIGTLTLERVQQLIAEKGRME 410 Query: 817 NVI 809 N + Sbjct: 411 NEV 413
>AK119869: | Length = 1009 Score = 28.9 bits (63), Expect = 9.4 Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 9/132 (6%) Frame = +3 Query: 123 RGTAVAGGTLMAMEGTILCRPIMQAGLPAALVNNSLIKSGQLGTAILGAVSKYRNI---- 290 RG V G M G + M +G +A V+ S SG G A+ GA + + + Sbjct: 776 RGITVGSGGWMKKSGISVAS--MSSGAISAPVSQS---SG--GPALGGARAASQPVHPYT 828 Query: 291 -TRLVSPISQ-SSSKNFRPICRSFSSSSDGNGYMARNF-NENDEDYVNST--VLEAVEVR 455 + + SP S SSS N RS SSDG +A ++ ++ DE +S+ V E V+ Sbjct: 829 ASSIPSPSSSGSSSPNTGQQSRSREPSSDGQDLLAGDYVSDADESEASSSKLVYEGGLVK 888 Query: 456 SGSEGYIVKMRD 491 + Y +++ D Sbjct: 889 LAGQQYYIQLSD 900 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 42,605,081 Number of extensions: 1019962 Number of successful extensions: 2616 Number of sequences better than 10.0: 10 Number of HSP's gapped: 2615 Number of HSP's successfully gapped: 10 Length of query: 477 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 373 Effective length of database: 11,235,591 Effective search space: 4190875443 Effective search space used: 4190875443 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
