| Clone Name | FLbaf57k23 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Q50604:Y1829_MYCTU Uncharacterized protein Rv1829/MT1877 - Mycob... | 49 | 4e-05 | 2 | Q8GCV0:HEMH_LEPBI Ferrochelatase - Leptospira biflexa | 33 | 3.9 | 3 | Q299G2:CYFIP_DROPS Cytoplasmic FMR1-interacting protein - Drosop... | 32 | 5.0 | 4 | Q9VF87:CYFIP_DROME Cytoplasmic FMR1-interacting protein - Drosop... | 32 | 5.0 | 5 | Q27474:DNLI_CAEEL DNA ligase - Caenorhabditis elegans | 32 | 6.6 |
|---|
>Q50604:Y1829_MYCTU Uncharacterized protein Rv1829/MT1877 - Mycobacterium tuberculosis| Length = 164 Score = 49.3 bits (116), Expect = 4e-05 Identities = 33/127 (25%), Positives = 62/127 (48%) Frame = +3 Query: 528 GREIPESAPQPAIVLRIEDGSGTLLPIIVLEMPSVLLMAAIRHVHIARPTIYQVVKELID 707 G + + QP ++LR +G LPI + + + + + V RP + ++++LI Sbjct: 8 GIRVEQPQNQPVLLLREANGD-RYLPIWIGQSEAAAIALEQQGVEPPRPLTHDLIRDLIA 66 Query: 708 KMGYEVKLVRVNKRIQEAYCAELYLTKTGDQTECITFDLRPSDAINIAVRCKVPIQVHRS 887 +G+ +K VR+ + + A+L + I RPSD++ IA+R VPI V + Sbjct: 67 ALGHSLKEVRIVDLQEGTFYADLIFDRN------IKVSARPSDSVAIALRVGVPIYVEEA 120 Query: 888 LAYSDGI 908 + G+ Sbjct: 121 VLAQAGL 127
>Q8GCV0:HEMH_LEPBI Ferrochelatase - Leptospira biflexa| Length = 362 Score = 32.7 bits (73), Expect = 3.9 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -1 Query: 445 TASSTVELTXXXXXSLKFLAMYPLP--SDEELKLRQIGRKFFEDDWEIGETSLVMLRYLD 272 T ST+++ K +A+YP+ SD L +IG +F + WE+G S V + L Sbjct: 263 TEPSTIQMISSLAKQGKHIAVYPISFVSDHIETLEEIGEQFKDLTWEMGGKSFVRIPALG 322 Query: 271 TAP 263 P Sbjct: 323 IYP 325
>Q299G2:CYFIP_DROPS Cytoplasmic FMR1-interacting protein - Drosophila pseudoobscura| (Fruit fly) Length = 1291 Score = 32.3 bits (72), Expect = 5.0 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 11/62 (17%) Frame = +3 Query: 927 KFVASAGLSDGLLFTELDRPDGQPCVEAQEFSLV-----------RNMFIAVVEERYKDA 1073 K + LS+ + EL PD QPC+EAQ S++ RN F+ + + ++A Sbjct: 4 KITLADALSNVEVLDELSLPDEQPCIEAQPCSIIYKANFDTNFEDRNGFVTGIAKYIEEA 63 Query: 1074 AT 1079 T Sbjct: 64 TT 65
>Q9VF87:CYFIP_DROME Cytoplasmic FMR1-interacting protein - Drosophila melanogaster (Fruit| fly) Length = 1291 Score = 32.3 bits (72), Expect = 5.0 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 11/62 (17%) Frame = +3 Query: 927 KFVASAGLSDGLLFTELDRPDGQPCVEAQEFSLV-----------RNMFIAVVEERYKDA 1073 K + LS+ + EL PD QPC+EAQ S++ RN F+ + + ++A Sbjct: 4 KITLADALSNVEVLDELSLPDEQPCIEAQPCSIIYKANFDTNFEDRNGFVTGIAKYIEEA 63 Query: 1074 AT 1079 T Sbjct: 64 TT 65
>Q27474:DNLI_CAEEL DNA ligase - Caenorhabditis elegans| Length = 773 Score = 32.0 bits (71), Expect = 6.6 Identities = 19/62 (30%), Positives = 32/62 (51%) Frame = +3 Query: 306 PISQSSSKNFRPICRSFSSSSDGNGYMARNFNENDEDYVNSTVLEAVEVRSGSEGYIVKM 485 P+ + + R + R+ DG+ Y A + + ND D +NS EAV+ + EG ++K Sbjct: 388 PLVRKPLRKRRELLRTNFKKIDGSFYFATSVDTNDTDEINSFFDEAVQ--NKCEGLMIKT 445 Query: 486 RD 491 D Sbjct: 446 LD 447 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 260,507,147 Number of extensions: 5974473 Number of successful extensions: 15653 Number of sequences better than 10.0: 5 Number of HSP's gapped: 15648 Number of HSP's successfully gapped: 5 Length of query: 477 Length of database: 100,686,439 Length adjustment: 117 Effective length of query: 360 Effective length of database: 68,593,924 Effective search space: 24693812640 Effective search space used: 24693812640 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)