ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf57k17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK065396:Os10g0461100 120 2e-27
2Os08g0347500:Os08g0347500 120 2e-27
3AK072202:Os10g0461100 120 2e-27
4AK059274:Os10g0461100 88 1e-17
5AK060135:Os12g0190200 41 0.001
6AK058893:Os12g0190200 41 0.001
7AK058904:Os01g0934400 39 0.009
8Os07g0275100:Os07g0275100 35 0.077
9AK062330:Os08g0504500 35 0.10
10AK104269:Os01g0805300 34 0.22
11AK065795:Os01g0805300 34 0.22
12AK061140:Os01g0805300 34 0.22
13AK104548:Os12g0564400 33 0.29
14AK066183:Os12g0564400 33 0.29
15AK059949:Os12g0564400 33 0.29
16AF332875: 32 0.65
17AK068682:Os06g0583400 32 0.65
18AK068051:Os06g0583400 32 0.65
19AF513382:Os06g0583400 32 0.65
20AK108331:Os02g0134200 30 2.5
21AK100079:Os09g0444200 30 3.2
22AK103097:Os02g0215200 29 5.5
23AK071228:Os02g0214900 29 5.5
24AF513384:Os02g0214900 29 5.5
25AF513383:Os02g0215200 29 5.5
26AK119852: 29 7.2
27AK104916:Os03g0174100 29 7.2
28AK101424:Os12g0239000 29 7.2
29AK065337:Os03g0174100 29 7.2
30AK067671:Os06g0125500 28 9.4
31AF393848:Os06g0125500 28 9.4

>AK065396:Os10g0461100 |
          Length = 537
 Score =  120 bits (301), Expect = 2e-27
 Identities = 60/126 (47%), Positives = 79/126 (62%)
 Frame = +2

Query: 512 GHDSAFKDRNVQLQSVRVAFIPTQKTDIRDLGPMDEAIFNLVNEVYAAPNQIPTIYEMQE 691
           G D  +KD    L+SV V  IPT K DIR+LGP D+    L+ +V AAP Q   + E +E
Sbjct: 397 GQDKVYKDVIEPLESVSVNTIPTSKQDIRELGPPDQVAEALIRKVLAAPTQKTKLIEAKE 456

Query: 692 RTVDGRNYWTFEYDLEAPGYGVSAFATIAIGNGRYYTLIVTANERRWSRLRNKLKVVADS 871
             VDGR Y+TFE+  +AP +   A   IAI NG++YTL   ANERRW +++++L  V DS
Sbjct: 457 NDVDGRTYYTFEFTAQAPNFTRHALGAIAIANGKFYTLTTGANERRWEKIKDRLHTVVDS 516

Query: 872 FKISDL 889
           FKI  L
Sbjct: 517 FKIEVL 522



 Score = 33.1 bits (74), Expect = 0.38
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 277 SAYAGEVPKNYRSYVDANDGYSYLYPADWRVI 372
           +A A E  K +    D  DGYS+LYP  W+ +
Sbjct: 362 AANAAEAKKGFLPVTDKKDGYSFLYPFGWQEV 393



to top

>Os08g0347500:Os08g0347500 |
          Length = 257

 Score =  120 bits (300), Expect = 2e-27
 Identities = 59/123 (47%), Positives = 78/123 (63%)
 Frame = +2

Query: 512 GHDSAFKDRNVQLQSVRVAFIPTQKTDIRDLGPMDEAIFNLVNEVYAAPNQIPTIYEMQE 691
           G D  +KD    L+SV V  IPT K DIR+LGP D+    L+ +V AAP Q   + E +E
Sbjct: 118 GQDKVYKDVIEPLESVSVNTIPTSKQDIRELGPPDQVAEALIRKVLAAPTQKTKLIEAKE 177

Query: 692 RTVDGRNYWTFEYDLEAPGYGVSAFATIAIGNGRYYTLIVTANERRWSRLRNKLKVVADS 871
             VDGR Y+TFE+  +AP +   A   IAI NG++YTL   ANERRW +++++L  V DS
Sbjct: 178 NDVDGRTYYTFEFTAQAPNFTRHALGAIAIANGKFYTLTTGANERRWEKIKDRLHTVVDS 237

Query: 872 FKI 880
           FKI
Sbjct: 238 FKI 240



 Score = 36.6 bits (83), Expect = 0.035
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +1

Query: 277 SAYAGEVPKNYRSYVDANDGYSYLYPADWRVI 372
           +AYA E  K +    D  DGYS+LYP  W+ +
Sbjct: 83  AAYAAEAKKGFLPVTDKKDGYSFLYPFGWQEV 114



to top

>AK072202:Os10g0461100 |
          Length = 523

 Score =  120 bits (300), Expect = 2e-27
 Identities = 59/123 (47%), Positives = 78/123 (63%)
 Frame = +2

Query: 512 GHDSAFKDRNVQLQSVRVAFIPTQKTDIRDLGPMDEAIFNLVNEVYAAPNQIPTIYEMQE 691
           G D  +KD    L+SV V  IPT K DIR+LGP D+    L+ +V AAP Q   + E +E
Sbjct: 397 GQDKVYKDVIEPLESVSVNTIPTSKQDIRELGPPDQVAEALIRKVLAAPTQKTKLIEAKE 456

Query: 692 RTVDGRNYWTFEYDLEAPGYGVSAFATIAIGNGRYYTLIVTANERRWSRLRNKLKVVADS 871
             VDGR Y+TFE+  +AP +   A   IAI NG++YTL   ANERRW +++++L  V DS
Sbjct: 457 NDVDGRTYYTFEFTAQAPNFTRHALGAIAIANGKFYTLTTGANERRWEKIKDRLHTVVDS 516

Query: 872 FKI 880
           FKI
Sbjct: 517 FKI 519



 Score = 33.1 bits (74), Expect = 0.38
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 277 SAYAGEVPKNYRSYVDANDGYSYLYPADWRVI 372
           +A A E  K +    D  DGYS+LYP  W+ +
Sbjct: 362 AANAAEAKKGFLPVTDKKDGYSFLYPFGWQEV 393



to top

>AK059274:Os10g0461100 |
          Length = 105

 Score = 88.2 bits (217), Expect = 1e-17
 Identities = 41/86 (47%), Positives = 56/86 (65%)
 Frame = +2

Query: 632 LVNEVYAAPNQIPTIYEMQERTVDGRNYWTFEYDLEAPGYGVSAFATIAIGNGRYYTLIV 811
           L+ +V AAP Q   + E +E  VDGR Y+TFE+  +AP +   A   IAI NG++YTL  
Sbjct: 5   LIRKVLAAPTQKTKLIEAKENDVDGRTYYTFEFTAQAPNFTRHALGAIAIANGKFYTLTT 64

Query: 812 TANERRWSRLRNKLKVVADSFKISDL 889
            ANERRW +++++L  V DSFKI  L
Sbjct: 65  GANERRWEKIKDRLHTVVDSFKIEVL 90



to top

>AK060135:Os12g0190200 |
          Length = 273

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 25/69 (36%), Positives = 32/69 (46%)
 Frame = +2

Query: 674 IYEMQERTVDGRNYWTFEYDLEAPGYGVSAFATIAIGNGRYYTLIVTANERRWSRLRNKL 853
           +  M      GR Y+ FE  LE P      F T      R Y   VTAN  +W R  N L
Sbjct: 210 VLSMATAEYSGRTYYQFE--LEPP----HIFITATAAGNRLYLFNVTANGLQWKRNYNDL 263

Query: 854 KVVADSFKI 880
           K +A+SF++
Sbjct: 264 KQIAESFRV 272



to top

>AK058893:Os12g0190200 |
          Length = 171

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 25/69 (36%), Positives = 32/69 (46%)
 Frame = +2

Query: 674 IYEMQERTVDGRNYWTFEYDLEAPGYGVSAFATIAIGNGRYYTLIVTANERRWSRLRNKL 853
           +  M      GR Y+ FE  LE P      F T      R Y   VTAN  +W R  N L
Sbjct: 108 VLSMATAEYSGRTYYQFE--LEPP----HIFITATAAGNRLYLFNVTANGLQWKRNYNDL 161

Query: 854 KVVADSFKI 880
           K +A+SF++
Sbjct: 162 KQIAESFRV 170



to top

>AK058904:Os01g0934400 |
          Length = 180

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +2

Query: 683 MQERTVDGRNYWTFEYDLEAPGYGVSAFATIAIGNGRYYTLIVTANERRWSRLRNKLKVV 862
           ++E   +   Y+  E+ +E+P +     A     +G+ YTL   A E  W  +R +   +
Sbjct: 111 LREDPANNVKYYKLEFRVESPSFRRRNVAVCCAKDGKLYTLNAQAPESAWKAVRKEFLAM 170

Query: 863 ADSFKI 880
           ADSF +
Sbjct: 171 ADSFSL 176



to top

>Os07g0275100:Os07g0275100 |
          Length = 249

 Score = 35.4 bits (80), Expect = 0.077
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +1

Query: 211 VTKRRXXXXXXXXXSTVLLNSRSAYAGEVP-KNYRSYVDANDGYSYLYPADW 363
           V +R          + +L  S+     E+    +R Y+D  DGYS+LYP  W
Sbjct: 37  VPRRNVLSTMLSTSTVILFGSKQITLAEITGATFREYIDTFDGYSFLYPKSW 88



to top

>AK062330:Os08g0504500 |
          Length = 243

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 3/128 (2%)
 Frame = +2

Query: 512 GHDSAFKDRNVQLQSVRVAFIPTQKTDIRDLGPMDEAIFNLVNEVYAAPNQIPT---IYE 682
           G DS F +   + +   + F+       R L P+   + NL        +QI +   +  
Sbjct: 115 GTDSEFFNPRKRSEREYLTFL----AGFRALAPVGAVLDNLALSDVGLQDQIASADGVLS 170

Query: 683 MQERTVDGRNYWTFEYDLEAPGYGVSAFATIAIGNGRYYTLIVTANERRWSRLRNKLKVV 862
            + R   G+ Y    Y+ E  G G  +  ++     + Y   VTA    WSR    L+ +
Sbjct: 171 TERRDGGGQLY----YEYEIAGAGAHSLISVTCARNKLYAHFVTAPNPEWSRDEAVLRRL 226

Query: 863 ADSFKISD 886
             SFK  D
Sbjct: 227 HQSFKTVD 234



to top

>AK104269:Os01g0805300 |
          Length = 272

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 19/96 (19%), Positives = 38/96 (39%)
 Frame = +2

Query: 593 IRDLGPMDEAIFNLVNEVYAAPNQIPTIYEMQERTVDGRNYWTFEYDLEAPGYGVSAFAT 772
           I D+G  +  I +L   V         + +     +DG+ Y+++  +      G    A 
Sbjct: 177 IEDIGSPERLIASLGPFVTGNTFDSDELVDTSVEKIDGQTYYSYVLETPLALTGSHNLAK 236

Query: 773 IAIGNGRYYTLIVTANERRWSRLRNKLKVVADSFKI 880
                      + +A++++W      LK + DSFK+
Sbjct: 237 ATAKGNTVVLFVASASDKQWQSSEKVLKTIVDSFKV 272



to top

>AK065795:Os01g0805300 |
          Length = 272

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 19/96 (19%), Positives = 38/96 (39%)
 Frame = +2

Query: 593 IRDLGPMDEAIFNLVNEVYAAPNQIPTIYEMQERTVDGRNYWTFEYDLEAPGYGVSAFAT 772
           I D+G  +  I +L   V         + +     +DG+ Y+++  +      G    A 
Sbjct: 177 IEDIGSPERLIASLGPFVTGNTFDSDELVDTSVEKIDGQTYYSYVLETPLALTGSHNLAK 236

Query: 773 IAIGNGRYYTLIVTANERRWSRLRNKLKVVADSFKI 880
                      + +A++++W      LK + DSFK+
Sbjct: 237 ATAKGNTVVLFVASASDKQWQSSEKVLKTIVDSFKV 272



to top

>AK061140:Os01g0805300 |
          Length = 272

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 19/96 (19%), Positives = 38/96 (39%)
 Frame = +2

Query: 593 IRDLGPMDEAIFNLVNEVYAAPNQIPTIYEMQERTVDGRNYWTFEYDLEAPGYGVSAFAT 772
           I D+G  +  I +L   V         + +     +DG+ Y+++  +      G    A 
Sbjct: 177 IEDIGSPERLIASLGPFVTGNTFDSDELVDTSVEKIDGQTYYSYVLETPLALTGSHNLAK 236

Query: 773 IAIGNGRYYTLIVTANERRWSRLRNKLKVVADSFKI 880
                      + +A++++W      LK + DSFK+
Sbjct: 237 ATAKGNTVVLFVASASDKQWQSSEKVLKTIVDSFKV 272



to top

>AK104548:Os12g0564400 |
          Length = 249

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 307 YRSYVDANDGYSYLYPADW 363
           +R Y+D  DGYS+LYP  W
Sbjct: 70  FREYIDTFDGYSFLYPKSW 88



to top

>AK066183:Os12g0564400 |
          Length = 194

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 307 YRSYVDANDGYSYLYPADW 363
           +R Y+D  DGYS+LYP  W
Sbjct: 76  FREYIDTFDGYSFLYPKSW 94



to top

>AK059949:Os12g0564400 |
          Length = 249

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +1

Query: 307 YRSYVDANDGYSYLYPADW 363
           +R Y+D  DGYS+LYP  W
Sbjct: 70  FREYIDTFDGYSFLYPKSW 88



to top

>AF332875: |
          Length = 493

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = +3

Query: 126 LYSYCQAERGSSVGGERKLDRSIL**QEGHQKEIGIAWCWSFIHCPAKQPLCICWRSTKE 305
           LYS+CQ   G SVGG  KL+         H  +I I W     H    +    C+ +   
Sbjct: 119 LYSFCQTYAGGSVGGAVKLN---------HGHDIAINWAGGLHHAKKCEASGFCYVNDIV 169

Query: 306 LPVL 317
           L +L
Sbjct: 170 LAIL 173



to top

>AK068682:Os06g0583400 |
          Length = 518

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = +3

Query: 126 LYSYCQAERGSSVGGERKLDRSIL**QEGHQKEIGIAWCWSFIHCPAKQPLCICWRSTKE 305
           LYS+CQ   G SVGG  KL+         H  +I I W     H    +    C+ +   
Sbjct: 119 LYSFCQTYAGGSVGGAVKLN---------HGHDIAINWAGGLHHAKKCEASGFCYVNDIV 169

Query: 306 LPVL 317
           L +L
Sbjct: 170 LAIL 173



to top

>AK068051:Os06g0583400 |
          Length = 460

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = +3

Query: 126 LYSYCQAERGSSVGGERKLDRSIL**QEGHQKEIGIAWCWSFIHCPAKQPLCICWRSTKE 305
           LYS+CQ   G SVGG  KL+         H  +I I W     H    +    C+ +   
Sbjct: 119 LYSFCQTYAGGSVGGAVKLN---------HGHDIAINWAGGLHHAKKCEASGFCYVNDIV 169

Query: 306 LPVL 317
           L +L
Sbjct: 170 LAIL 173



to top

>AF513382:Os06g0583400 |
          Length = 518

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = +3

Query: 126 LYSYCQAERGSSVGGERKLDRSIL**QEGHQKEIGIAWCWSFIHCPAKQPLCICWRSTKE 305
           LYS+CQ   G SVGG  KL+         H  +I I W     H    +    C+ +   
Sbjct: 119 LYSFCQTYAGGSVGGAVKLN---------HGHDIAINWAGGLHHAKKCEASGFCYVNDIV 169

Query: 306 LPVL 317
           L +L
Sbjct: 170 LAIL 173



to top

>AK108331:Os02g0134200 |
          Length = 255

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 7/63 (11%)
 Frame = -3

Query: 949 SFARLANGAGGQEEVAQSGVQVGDLEGVGDDFELVAQP-------APPPLVSGHDQRVVP 791
           SF R A+G    +E   + V VGD EG G D +    P       AP   +  H  R+VP
Sbjct: 23  SFGRGADGVD-DDEATPASVDVGDAEGAGLDLDFAFAPPVSAAELAPADDIFAHG-RIVP 80

Query: 790 PIP 782
             P
Sbjct: 81  AYP 83



to top

>AK100079:Os09g0444200 |
          Length = 691

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -3

Query: 691 LLHFIDRRYLVRGSVHFVYQIEDGL 617
           LL F+  R + RGSVHF Y I D L
Sbjct: 489 LLRFVAPRMMQRGSVHFSYGIADNL 513



to top

>AK103097:Os02g0215200 |
          Length = 509

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 18/64 (28%), Positives = 26/64 (40%)
 Frame = +3

Query: 126 LYSYCQAERGSSVGGERKLDRSIL**QEGHQKEIGIAWCWSFIHCPAKQPLCICWRSTKE 305
           LY+YCQ   G+SVG   KL+            +I I W     H    +    C+ +   
Sbjct: 123 LYAYCQTYAGASVGAAVKLNHG--------THDIAINWSGGLHHAKKSEASGFCYVNDIV 174

Query: 306 LPVL 317
           L +L
Sbjct: 175 LAIL 178



to top

>AK071228:Os02g0214900 |
          Length = 213

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 18/64 (28%), Positives = 26/64 (40%)
 Frame = +3

Query: 126 LYSYCQAERGSSVGGERKLDRSIL**QEGHQKEIGIAWCWSFIHCPAKQPLCICWRSTKE 305
           LY+YCQ   G+SVG   KL+            +I I W     H    +    C+ +   
Sbjct: 123 LYAYCQTYAGASVGAAVKLNHG--------THDIAINWSGGLHHAKKSEASGFCYVNDIV 174

Query: 306 LPVL 317
           L +L
Sbjct: 175 LAIL 178



to top

>AF513384:Os02g0214900 |
          Length = 510

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 18/64 (28%), Positives = 26/64 (40%)
 Frame = +3

Query: 126 LYSYCQAERGSSVGGERKLDRSIL**QEGHQKEIGIAWCWSFIHCPAKQPLCICWRSTKE 305
           LY+YCQ   G+SVG   KL+            +I I W     H    +    C+ +   
Sbjct: 123 LYAYCQTYAGASVGAAVKLNHG--------THDIAINWSGGLHHAKKSEASGFCYVNDIV 174

Query: 306 LPVL 317
           L +L
Sbjct: 175 LAIL 178



to top

>AF513383:Os02g0215200 |
          Length = 498

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 18/64 (28%), Positives = 26/64 (40%)
 Frame = +3

Query: 126 LYSYCQAERGSSVGGERKLDRSIL**QEGHQKEIGIAWCWSFIHCPAKQPLCICWRSTKE 305
           LY+YCQ   G+SVG   KL+            +I I W     H    +    C+ +   
Sbjct: 123 LYAYCQTYAGASVGAAVKLNHG--------THDIAINWSGGLHHAKKSEASGFCYVNDIV 174

Query: 306 LPVL 317
           L +L
Sbjct: 175 LAIL 178



to top

>AK119852: |
          Length = 859

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 19/74 (25%), Positives = 32/74 (43%)
 Frame = +3

Query: 516 MIQRSRTVMCSCSLSVWPSFLLRKQTFVT*VRWMRPSSIW*TKCTLPRTRYRRSMKCRSA 695
           + Q  R+++   +L V  ++ +R Q+F+    W +           P T+       RSA
Sbjct: 235 LTQLGRSILTEATLQVEKNYYMRCQSFLD-QEWQQ---------VFPATQDWTKPPERSA 284

Query: 696 RWMAGTTGRLSTIW 737
            W    TGR+  IW
Sbjct: 285 AWYLRQTGRVEIIW 298



to top

>AK104916:Os03g0174100 |
          Length = 438

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -3

Query: 199 QRMLRSSL-RSPPTEEPRSA-WQ*LYSWARPTVWKSGSAGLPFHL-GRSSDPS*AYPSLV 29
           Q+++R S  RSP +++ +SA W      A P  W S   G  +   G + DPS AY S  
Sbjct: 311 QQVVRLSWGRSPASKQDQSAVWS---QQADPNQWASAYYGYGYDAYGYAQDPSYAYNSYA 367

Query: 28  GY 23
           GY
Sbjct: 368 GY 369



to top

>AK101424:Os12g0239000 |
          Length = 1174

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = -2

Query: 770 SQTPTRRSPAPPDRTQTXXXSCHPPCAPAFHRSSVSGSG 654
           S TP+RRSP PP           P  +PA  R S + SG
Sbjct: 189 SSTPSRRSPTPPGNKTLTPPRRSP--SPASRRMSATSSG 225



to top

>AK065337:Os03g0174100 |
          Length = 416

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -3

Query: 199 QRMLRSSL-RSPPTEEPRSA-WQ*LYSWARPTVWKSGSAGLPFHL-GRSSDPS*AYPSLV 29
           Q+++R S  RSP +++ +SA W      A P  W S   G  +   G + DPS AY S  
Sbjct: 289 QQVVRLSWGRSPASKQDQSAVWS---QQADPNQWASAYYGYGYDAYGYAQDPSYAYNSYA 345

Query: 28  GY 23
           GY
Sbjct: 346 GY 347



to top

>AK067671:Os06g0125500 |
          Length = 433

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
 Frame = +3

Query: 483 ALHDRISTSWGMIQRSR----TVMCSCSLSVWPSFLLRKQTFVT*VRWMRPSSI 632
           ALH++ +   G + R++      +CS +  ++P +L +  T ++ + W+ PSS+
Sbjct: 196 ALHEKEARRKGGLTRNQFFLVAFVCSFAYYIFPGYLFQMLTSLSWICWVFPSSV 249



to top

>AF393848:Os06g0125500 |
          Length = 766

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
 Frame = +3

Query: 483 ALHDRISTSWGMIQRSR----TVMCSCSLSVWPSFLLRKQTFVT*VRWMRPSSI 632
           ALH++ +   G + R++      +CS +  ++P +L +  T ++ + W+ PSS+
Sbjct: 226 ALHEKEARRKGGLTRNQFFLVAFVCSFAYYIFPGYLFQMLTSLSWICWVFPSSV 279


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 35,363,428
Number of extensions: 848428
Number of successful extensions: 2542
Number of sequences better than 10.0: 31
Number of HSP's gapped: 2538
Number of HSP's successfully gapped: 34
Length of query: 384
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 282
Effective length of database: 11,315,673
Effective search space: 3191019786
Effective search space used: 3191019786
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top