ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf57i08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK073346:Os09g0280300 314 2e-85
2AK063404:Os02g0803200 28 2.1
3Os05g0293200:Os05g0293200 30 5.8
4AK063924:Os07g0603900 30 5.8
5Os03g0399800:Os03g0399800 30 7.5
6Os02g0163800:Os02g0163800 30 9.8

>AK073346:Os09g0280300 |
          Length = 359
 Score =  314 bits (804), Expect = 2e-85
 Identities = 151/170 (88%), Positives = 162/170 (95%)
 Frame = +2

Query: 1454 GGFILDMGVHFIAGLRMLVGSEVATVSSISRHVDTDLPPPDNICSLFQLENGCAGVLVFA 1633
            GGFILDMGVHFIAGLRM+VGSE+ATVSSISRHVD  LPPPDNICSLFQLENGCAGV VFA
Sbjct: 190  GGFILDMGVHFIAGLRMMVGSEIATVSSISRHVDKALPPPDNICSLFQLENGCAGVFVFA 249

Query: 1634 VNSRSPKILWRVDGTKGTVQIERGVDGGKHGYQVLFSNESGQCQKTFYPFCGVHEELKAF 1813
            VNSR+PKILWRVDGT+GTVQIERG+  GKHGYQVLF+NE+GQCQ TFYPFCGV+EELKAF
Sbjct: 250  VNSRTPKILWRVDGTRGTVQIERGIASGKHGYQVLFTNENGQCQTTFYPFCGVNEELKAF 309

Query: 1814 VHDMVQASKDGDHEAEPRSSYVEGARDVAVLEAMLESSAKQGAMVHVKKF 1963
            VHD+VQA+KDGDH+AEPRSSYVEGARDVAVLEAMLESSAKQG MV VKKF
Sbjct: 310  VHDIVQANKDGDHKAEPRSSYVEGARDVAVLEAMLESSAKQGTMVQVKKF 359



 Score =  253 bits (647), Expect = 3e-67
 Identities = 138/213 (64%), Positives = 147/213 (69%)
 Frame = +1

Query: 43  MAGDGELLPRIAVVGAGIFARTQYIPRLREISHLVVLKAIWSRTQXXXXXXXXXXRDFAP 222
           MAGDG  LPRIAVVGAGIFARTQYIPRLREI+HLV+LK IWSRT+          RDFAP
Sbjct: 1   MAGDG--LPRIAVVGAGIFARTQYIPRLREIAHLVLLKTIWSRTKESAEAAAELARDFAP 58

Query: 223 DIECKWGDTGLEEIMGDRSIXXXXXXXXXXXXXELSLKMLKAGKHVIQEKPASGSTTEAE 402
           +I+ +WGD GLEEIMGD SI             +LSLKMLKAGKHVIQEKPASGST EAE
Sbjct: 59  EIQPRWGDAGLEEIMGDASISAVAVVLAGQVQVDLSLKMLKAGKHVIQEKPASGSTMEAE 118

Query: 403 TALSVYNSFPNKFPYKPIWALGENYRFEPAFVEVNICSRNFSVXXXXXXXDFYRQSSKLM 582
           TALSVYNSFPN+FPYKPIWAL ENYRFEPAFVE                      S KLM
Sbjct: 119 TALSVYNSFPNQFPYKPIWALAENYRFEPAFVE----------------------SRKLM 156

Query: 583 NDIGDMMNIQVIVEGXXXXXXXXXXXXWRRNFV 681
           +DIGDMMNIQVIVEG            WRRNFV
Sbjct: 157 SDIGDMMNIQVIVEGSMNSSNPYFNSSWRRNFV 189



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>AK063404:Os02g0803200 |
          Length = 447

 Score = 28.5 bits (62), Expect(2) = 2.1
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +2

Query: 269 ETVPSSASPLFLQAKSRLSFP*RCSRQESM*FKRNLPLDRQPKQKLHCQSTTHF--QTSS 442
           + V S++SP   Q  +   F    S  ES+   RNLP  RQP+Q+   +STT F   T+ 
Sbjct: 131 DLVRSTSSPTSPQGPNSGHFS---SLAESL---RNLPSGRQPQQRRQPRSTTPFLSPTAH 184

Query: 443 PI 448
           PI
Sbjct: 185 PI 186



 Score = 21.9 bits (45), Expect(2) = 2.1
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
 Frame = +3

Query: 27  SNKKKNGGGRRASSPDXXXXXXHLRAHAVHPQAPR--DLPPRRPQGHLEP 170
           S K   G GR  ++         L +   H  + R    PP RP G+ EP
Sbjct: 44  SPKPSEGEGRNPAASLFQDLRDRLMSTPSHLPSRRIPTAPPPRPSGNAEP 93



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>Os05g0293200:Os05g0293200 |
          Length = 1496

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 12/92 (13%)
 Frame = -3

Query: 1692 CTVPFVPSTRHNIFGDL----ELTANTKTPAHPFSSWKREQMLSGGGKSVST*REIDDTV 1525
            C+ PF   T H++ G L    + TA + TP     S    +     G +V   R      
Sbjct: 942  CSFPFAELTNHSVDGSLDFLEDFTAPSPTPIGRPRSGPAARAAPAAGPAVGAARPTVPPS 1001

Query: 1524 ATSEPTSILSPAMKCT--------PISSMKPP 1453
              +EPT+  +PA +          P+S+  PP
Sbjct: 1002 PLAEPTTSSAPAPEPAAHEPASPGPLSARSPP 1033



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>AK063924:Os07g0603900 |
          Length = 486

 Score = 30.4 bits (67), Expect = 5.8
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = -1

Query: 113 YCVRAKMPAPTTAIRGRSSPSPAILLLVGVSFASP 9
           + +R  +P+P TA    +SPSPAI LL   S ASP
Sbjct: 5   HLLRRLLPSPATAAAAAASPSPAIRLL---STASP 36



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>Os03g0399800:Os03g0399800 |
          Length = 343

 Score = 30.0 bits (66), Expect = 7.5
 Identities = 18/57 (31%), Positives = 25/57 (43%)
 Frame = +3

Query: 9   W*GKRYSNKKKNGGGRRASSPDXXXXXXHLRAHAVHPQAPRDLPPRRPQGHLEPHPG 179
           W G    + K  GG RR++         H+ +    PQA R   P RP+  L+P  G
Sbjct: 73  WRGSGQPDPKLGGGSRRSTPGSTPLGGSHVGSGTARPQAMRGQLPLRPR--LDPLEG 127



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>Os02g0163800:Os02g0163800 |
          Length = 1286

 Score = 29.6 bits (65), Expect = 9.8
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = -1

Query: 107 VRAKMPAPTTAIRGRSSPSPAILLLVGVSFASPL 6
           V  + PAPT    G S+P+PA +    V FA+PL
Sbjct: 748 VSPRAPAPTATPPGTSTPTPARVERSPVEFATPL 781


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 67,624,134
Number of extensions: 1568889
Number of successful extensions: 4010
Number of sequences better than 10.0: 6
Number of HSP's gapped: 4009
Number of HSP's successfully gapped: 8
Length of query: 778
Length of database: 15,399,855
Length adjustment: 108
Effective length of query: 670
Effective length of database: 11,075,427
Effective search space: 7420536090
Effective search space used: 7420536090
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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