Clone Information

BLAST Search Result

Clone Name	FLbaf54b17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_001066894.1\| Oryza sativa (japonica cultivar-group) Os07g...	371	4e-99
2	dbj\|AK066723.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	371	4e-99
3	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	101	6e-18
4	dbj\|AP004260.2\| Oryza sativa (japonica cultivar-group) genomic D...	101	6e-18
5	dbj\|AP004339.3\| Oryza sativa (japonica cultivar-group) genomic D...	101	6e-18
6	gb\|AC140025.7\| Medicago truncatula clone mth2-11i16, complete se...	56	3e-04
7	dbj\|AP008226.1\| Thermus thermophilus HB8 genomic DNA, complete g...	46	0.31
8	gb\|AE017221.1\| Thermus thermophilus HB27, complete genome	46	0.31
9	ref\|XM_001102812.1\| PREDICTED: Macaca mulatta similar to Nck-ass...	44	1.2
10	gb\|AC126044.4\| Mus musculus BAC clone RP23-12O8 from chromosome ...	44	1.2
11	gb\|AC118477.14\| Mus musculus chromosome 1, clone RP24-178B14, co...	44	1.2
12	dbj\|AP006618.1\| Nocardia farcinica IFM 10152 DNA, complete genome	44	1.2
13	ref\|XM_001018376.1\| Tetrahymena thermophila SB210 Protein kinase...	42	4.8
14	gb\|AC161225.14\| Mus musculus chromosome 5, clone RP23-37G13, com...	42	4.8
15	gb\|AC122283.3\| Mus musculus BAC clone RP23-242G6 from chromosome...	42	4.8
16	gb\|AC140291.2\| Mus musculus BAC clone RP24-326N12 from chromosom...	42	4.8
17	gb\|AC120548.15\| Mus musculus chromosome 17, clone RP23-211H11, c...	42	4.8
18	dbj\|AK002123.1\| Homo sapiens cDNA FLJ11261 fis, clone PLACE1009090	42	4.8
19	gb\|AY077465.1\| Xenorhabdus nematophila strain ATCC 19061 symbios...	42	4.8
20	gb\|AC100868.2\| Homo sapiens chromosome 8, clone RP11-246K8, comp...	42	4.8
21	gb\|AC026596.9\| Homo sapiens chromosome 8, clone RP11-380O15, com...	42	4.8
22	gb\|AC092817.2\| Homo sapiens chromosome 8, clone RP11-240B13, com...	42	4.8
23	ref\|XM_687476.1\| PREDICTED: Danio rerio similar to centrosome-as...	42	4.8
24	gb\|AC130669.17\| Mus musculus chromosome 15, clone RP24-84O5, com...	42	4.8
25	gb\|AC154881.6\| Mus musculus chromosome 15, clone RP24-259H19, co...	42	4.8
26	emb\|AL939114.1\|SCO939114 Streptomyces coelicolor A3(2) complete ...	42	4.8
27	gb\|AC152417.3\| Mus musculus BAC clone RP23-56I21 from chromosome...	42	4.8
28	emb\|CR381643.18\| Zebrafish DNA sequence from clone DKEY-39N1 in ...	42	4.8
29	gb\|AC132135.3\| Mus musculus BAC clone RP23-268C21 from 10, compl...	42	4.8

>ref|NM_001066894.1| Oryza sativa (japonica cultivar-group) Os07g0631000 (Os07g0631000)
           mRNA, complete cds
          Length = 1385
 Score =  371 bits (187), Expect = 4e-99
 Identities = 523/635 (82%)
 Strand = Plus / Plus

                                                                       
Query: 137 atccatggctcggcccatgggatccagcggcttcgaggctgccctagccgtgtgccccgc 196
           |||||||||| |||||| ||||| |  |||||||||||| |||   ||||| ||||||||
Sbjct: 155 atccatggcttggcccacgggatgcctcggcttcgaggccgccgccgccgtctgccccgc 214

                                                                       
Query: 197 cgccgcccaggcctacttcaagtactgcggtattgtatccggatgcacaaatgcgaaccc 256
            |||  |||||| |||   ||||||| || ||||||||| |  |   |||| | |||| |
Sbjct: 215 ggccttccaggcgtaccagaagtactacgatattgtatcagcgttttcaaacgtgaacac 274

                                                                       
Query: 257 aagggaagggttggcggatctttcacgaactatagataatatggaaggaatgagggatgg 316
           | | ||||| ||||| || ||||||| |  |||||||   ||||||||| ||||||||| 
Sbjct: 275 acgagaaggattggctgagctttcacaagttatagatggcatggaaggattgagggatgc 334

                                                                       
Query: 317 aatatttggtgatattcacaagctcatgtcagttcttgagttcgatgatgtgagccaatt 376
            |||||| |||| || | |||||||||||||| |||||| || |||||||    || |||
Sbjct: 335 gatatttagtgacatccccaagctcatgtcagctcttgacttagatgatgctcaccgatt 394

                                                                       
Query: 377 taattccttctatgattttgtcttcttcatttctcgtgaaaatggacaaaagaatatcac 436
            | |  ||||||||||||||||||||||||||| || |||||||| |||||||| ||| |
Sbjct: 395 cagtatcttctatgattttgtcttcttcatttcccgagaaaatggccaaaagaacatctc 454

                                                                       
Query: 437 tgttcagaaggctcttgcagcatggaggatagttcttcttggaaggttccgattgcttga 496
           ||||||||  ||| | | |||||||||||| |||||   ||| |||||  | ||||||||
Sbjct: 455 tgttcagagagctgtgggagcatggaggatggttctaaatgggaggttttggttgcttga 514

                                                                       
Query: 497 ccggtggtgtaactttgttcagaagtaccaacgccacaacatttctgaggacgcctggca 556
           | ||||||||||||||||| |||||||||||||  |||||||  | ||||| | ||||||
Sbjct: 515 caggtggtgtaactttgttgagaagtaccaacgttacaacataacagaggatgtctggca 574

                                                                       
Query: 557 acagctattagctttcagcaggtgtgtaaatgaggacctggaaggttatgatccaaaagg 616
            |||||  ||||||||||||||||||||||||| ||  ||||||||||||||||||||||
Sbjct: 575 gcagctgctagctttcagcaggtgtgtaaatgaagatttggaaggttatgatccaaaagg 634

                                                                       
Query: 617 tgcttggcctgtcataattgatgattttgtggagcacatgcacagaatttatcgccctag 676
           ||||||||| ||  || ||||||||||||||||||| |||||||| ||||||    |  |
Sbjct: 635 tgcttggccagttctagttgatgattttgtggagcatatgcacaggatttataattcctg 694

                                                                       
Query: 677 tgactgctccagtgcaatggaatcgcaatgcagcatttccaatacatttagaggactaaa 736
           ||| ||||||||||| |||||||| ||||  | |||||||||||||||| ||||| ||||
Sbjct: 695 tgattgctccagtgcgatggaatcacaattgaacatttccaatacatttggaggaataaa 754

                                              
Query: 737 tctattacctggatcaaagaggaaatgccctactc 771
           || ||||||||||||||||||||||||||||||||
Sbjct: 755 tccattacctggatcaaagaggaaatgccctactc 789

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>dbj|AK066723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088A01, full
           insert sequence
          Length = 1386

 Score =  371 bits (187), Expect = 4e-99
 Identities = 523/635 (82%)
 Strand = Plus / Plus

                                                                       
Query: 137 atccatggctcggcccatgggatccagcggcttcgaggctgccctagccgtgtgccccgc 196
           |||||||||| |||||| ||||| |  |||||||||||| |||   ||||| ||||||||
Sbjct: 156 atccatggcttggcccacgggatgcctcggcttcgaggccgccgccgccgtctgccccgc 215

                                                                       
Query: 197 cgccgcccaggcctacttcaagtactgcggtattgtatccggatgcacaaatgcgaaccc 256
            |||  |||||| |||   ||||||| || ||||||||| |  |   |||| | |||| |
Sbjct: 216 ggccttccaggcgtaccagaagtactacgatattgtatcagcgttttcaaacgtgaacac 275

                                                                       
Query: 257 aagggaagggttggcggatctttcacgaactatagataatatggaaggaatgagggatgg 316
           | | ||||| ||||| || ||||||| |  |||||||   ||||||||| ||||||||| 
Sbjct: 276 acgagaaggattggctgagctttcacaagttatagatggcatggaaggattgagggatgc 335

                                                                       
Query: 317 aatatttggtgatattcacaagctcatgtcagttcttgagttcgatgatgtgagccaatt 376
            |||||| |||| || | |||||||||||||| |||||| || |||||||    || |||
Sbjct: 336 gatatttagtgacatccccaagctcatgtcagctcttgacttagatgatgctcaccgatt 395

                                                                       
Query: 377 taattccttctatgattttgtcttcttcatttctcgtgaaaatggacaaaagaatatcac 436
            | |  ||||||||||||||||||||||||||| || |||||||| |||||||| ||| |
Sbjct: 396 cagtatcttctatgattttgtcttcttcatttcccgagaaaatggccaaaagaacatctc 455

                                                                       
Query: 437 tgttcagaaggctcttgcagcatggaggatagttcttcttggaaggttccgattgcttga 496
           ||||||||  ||| | | |||||||||||| |||||   ||| |||||  | ||||||||
Sbjct: 456 tgttcagagagctgtgggagcatggaggatggttctaaatgggaggttttggttgcttga 515

                                                                       
Query: 497 ccggtggtgtaactttgttcagaagtaccaacgccacaacatttctgaggacgcctggca 556
           | ||||||||||||||||| |||||||||||||  |||||||  | ||||| | ||||||
Sbjct: 516 caggtggtgtaactttgttgagaagtaccaacgttacaacataacagaggatgtctggca 575

                                                                       
Query: 557 acagctattagctttcagcaggtgtgtaaatgaggacctggaaggttatgatccaaaagg 616
            |||||  ||||||||||||||||||||||||| ||  ||||||||||||||||||||||
Sbjct: 576 gcagctgctagctttcagcaggtgtgtaaatgaagatttggaaggttatgatccaaaagg 635

                                                                       
Query: 617 tgcttggcctgtcataattgatgattttgtggagcacatgcacagaatttatcgccctag 676
           ||||||||| ||  || ||||||||||||||||||| |||||||| ||||||    |  |
Sbjct: 636 tgcttggccagttctagttgatgattttgtggagcatatgcacaggatttataattcctg 695

                                                                       
Query: 677 tgactgctccagtgcaatggaatcgcaatgcagcatttccaatacatttagaggactaaa 736
           ||| ||||||||||| |||||||| ||||  | |||||||||||||||| ||||| ||||
Sbjct: 696 tgattgctccagtgcgatggaatcacaattgaacatttccaatacatttggaggaataaa 755

                                              
Query: 737 tctattacctggatcaaagaggaaatgccctactc 771
           || ||||||||||||||||||||||||||||||||
Sbjct: 756 tccattacctggatcaaagaggaaatgccctactc 790

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score =  101 bits (51), Expect = 6e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                            
Query: 515      tcagaagtaccaacgccacaacatttctgaggacgcctggcaacagctattagctttcag 574
                |||||||||||||||  |||||||  | ||||| | |||||| |||||  ||||||||||
Sbjct: 26112029 tcagaagtaccaacgttacaacataacagaggatgtctggcagcagctgctagctttcag 26111970

                                                           
Query: 575      caggtgtgtaaatgaggacctggaaggttatgatccaaaaggt 617
                ||||||||||||||| ||  |||||||||||||||||||||||
Sbjct: 26111969 caggtgtgtaaatgaagatttggaaggttatgatccaaaaggt 26111927



 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                            
Query: 728      aggactaaatctattacctggatcaaagaggaaatgccctactc 771
                |||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 26110754 aggaataaatccattacctggatcaaagaggaaatgccctactc 26110711



 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                                
Query: 383      cttctatgattttgtcttcttcatttctcgtgaaaatggacaaaagaa 430
                ||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 26113039 cttctatgattttgtcttcttcatttcccgagaaaatggccaaaagaa 26112992



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 614      aggtgcttggcctgtcataattgatgattttgtggagcacatgcacag 661
                |||||||||||| ||  || ||||||||||||||||||| ||||||||
Sbjct: 26111802 aggtgcttggccagttctagttgatgattttgtggagcatatgcacag 26111755



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                       
Query: 676      gtgactgctccagtgcaatggaatcgcaatgcagcatttccaatacatttagagg 730
                |||| ||||||||||| |||||||| ||||  | |||||||||||||||| ||||
Sbjct: 26110882 gtgattgctccagtgcgatggaatcacaattgaacatttccaatacatttggagg 26110828



 Score = 50.1 bits (25), Expect = 0.020
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                            
Query: 455      agcatggaggatagttcttcttggaaggttccgattgcttgaccggtggtgtaactttgt 514
                |||||||||||| |||||   ||| |||||  | ||||||||| ||||||||||||||||
Sbjct: 26112865 agcatggaggatggttctaaatgggaggttttggttgcttgacaggtggtgtaactttgt 26112806

                 
Query: 515      t 515
                |
Sbjct: 26112805 t 26112805

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>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0011H09
          Length = 147992

 Score =  101 bits (51), Expect = 6e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                          
Query: 515    tcagaagtaccaacgccacaacatttctgaggacgcctggcaacagctattagctttcag 574
              |||||||||||||||  |||||||  | ||||| | |||||| |||||  ||||||||||
Sbjct: 145591 tcagaagtaccaacgttacaacataacagaggatgtctggcagcagctgctagctttcag 145532

                                                         
Query: 575    caggtgtgtaaatgaggacctggaaggttatgatccaaaaggt 617
              ||||||||||||||| ||  |||||||||||||||||||||||
Sbjct: 145531 caggtgtgtaaatgaagatttggaaggttatgatccaaaaggt 145489



 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                          
Query: 728    aggactaaatctattacctggatcaaagaggaaatgccctactc 771
              |||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 144316 aggaataaatccattacctggatcaaagaggaaatgccctactc 144273



 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                              
Query: 383    cttctatgattttgtcttcttcatttctcgtgaaaatggacaaaagaa 430
              ||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 146601 cttctatgattttgtcttcttcatttcccgagaaaatggccaaaagaa 146554



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                              
Query: 614    aggtgcttggcctgtcataattgatgattttgtggagcacatgcacag 661
              |||||||||||| ||  || ||||||||||||||||||| ||||||||
Sbjct: 145364 aggtgcttggccagttctagttgatgattttgtggagcatatgcacag 145317



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                     
Query: 676    gtgactgctccagtgcaatggaatcgcaatgcagcatttccaatacatttagagg 730
              |||| ||||||||||| |||||||| ||||  | |||||||||||||||| ||||
Sbjct: 144444 gtgattgctccagtgcgatggaatcacaattgaacatttccaatacatttggagg 144390



 Score = 50.1 bits (25), Expect = 0.020
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                          
Query: 455    agcatggaggatagttcttcttggaaggttccgattgcttgaccggtggtgtaactttgt 514
              |||||||||||| |||||   ||| |||||  | ||||||||| ||||||||||||||||
Sbjct: 146427 agcatggaggatggttctaaatgggaggttttggttgcttgacaggtggtgtaactttgt 146368

               
Query: 515    t 515
              |
Sbjct: 146367 t 146367

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>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0519E12
          Length = 152448

 Score =  101 bits (51), Expect = 6e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                        
Query: 515  tcagaagtaccaacgccacaacatttctgaggacgcctggcaacagctattagctttcag 574
            |||||||||||||||  |||||||  | ||||| | |||||| |||||  ||||||||||
Sbjct: 3887 tcagaagtaccaacgttacaacataacagaggatgtctggcagcagctgctagctttcag 3828

                                                       
Query: 575  caggtgtgtaaatgaggacctggaaggttatgatccaaaaggt 617
            ||||||||||||||| ||  |||||||||||||||||||||||
Sbjct: 3827 caggtgtgtaaatgaagatttggaaggttatgatccaaaaggt 3785



 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 42/44 (95%)
 Strand = Plus / Minus

                                                        
Query: 728  aggactaaatctattacctggatcaaagaggaaatgccctactc 771
            |||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 2612 aggaataaatccattacctggatcaaagaggaaatgccctactc 2569



 Score = 71.9 bits (36), Expect = 5e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 383  cttctatgattttgtcttcttcatttctcgtgaaaatggacaaaagaa 430
            ||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 4897 cttctatgattttgtcttcttcatttcccgagaaaatggccaaaagaa 4850



 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                            
Query: 614  aggtgcttggcctgtcataattgatgattttgtggagcacatgcacag 661
            |||||||||||| ||  || ||||||||||||||||||| ||||||||
Sbjct: 3660 aggtgcttggccagttctagttgatgattttgtggagcatatgcacag 3613



 Score = 54.0 bits (27), Expect = 0.001
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 676  gtgactgctccagtgcaatggaatcgcaatgcagcatttccaatacatttagagg 730
            |||| ||||||||||| |||||||| ||||  | |||||||||||||||| ||||
Sbjct: 2740 gtgattgctccagtgcgatggaatcacaattgaacatttccaatacatttggagg 2686



 Score = 50.1 bits (25), Expect = 0.020
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 455  agcatggaggatagttcttcttggaaggttccgattgcttgaccggtggtgtaactttgt 514
            |||||||||||| |||||   ||| |||||  | ||||||||| ||||||||||||||||
Sbjct: 4723 agcatggaggatggttctaaatgggaggttttggttgcttgacaggtggtgtaactttgt 4664

             
Query: 515  t 515
            |
Sbjct: 4663 t 4663

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>gb|AC140025.7| Medicago truncatula clone mth2-11i16, complete sequence
          Length = 130592

 Score = 56.0 bits (28), Expect = 3e-04
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                                  
Query: 384    ttctatgattttgtcttcttcatttctcgtgaaaatggacaaaagaatatca 435
              |||||||| ||||| |||||||| | |||||||||||| |||||||| ||||
Sbjct: 100587 ttctatgaatttgttttcttcatgtgtcgtgaaaatggtcaaaagaacatca 100638

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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 183    gccgtgtgccccgccgccgcccaggcc 209
              |||||| ||||||||||||||||||||
Sbjct: 421717 gccgtgagccccgccgccgcccaggcc 421691

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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 46.1 bits (23), Expect = 0.31
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 183   gccgtgtgccccgccgccgcccaggcc 209
             |||||| ||||||||||||||||||||
Sbjct: 71397 gccgtgagccccgccgccgcccaggcc 71371

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>ref|XM_001102812.1| PREDICTED: Macaca mulatta similar to Nck-associated protein 5
            (LOC713453), mRNA
          Length = 6877

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 1034 gaaatgttcattttagtgcaat 1055
            ||||||||||||||||||||||
Sbjct: 6191 gaaatgttcattttagtgcaat 6212

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>gb|AC126044.4| Mus musculus BAC clone RP23-12O8 from chromosome 1, complete sequence
          Length = 213412

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 298    tggaaggaatgagggatggaatattt 323
              |||||||||||||||| |||||||||
Sbjct: 212152 tggaaggaatgagggaaggaatattt 212127

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>gb|AC118477.14| Mus musculus chromosome 1, clone RP24-178B14, complete sequence
          Length = 191518

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 298    tggaaggaatgagggatggaatattt 323
              |||||||||||||||| |||||||||
Sbjct: 132069 tggaaggaatgagggaaggaatattt 132094

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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 1.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 194     cgccgccgcccaggcctacttc 215
               ||||||||||||||||||||||
Sbjct: 5879428 cgccgccgcccaggcctacttc 5879449

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>ref|XM_001018376.1| Tetrahymena thermophila SB210 Protein kinase domain containing
            protein (TTHERM_00343300) mRNA, complete cds
          Length = 3837

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 391  attttgtcttcttcatttctc 411
            |||||||||||||||||||||
Sbjct: 1217 attttgtcttcttcatttctc 1197

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>gb|AC161225.14| Mus musculus chromosome 5, clone RP23-37G13, complete sequence
          Length = 165525

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 464   gatagttcttcttggaaggtt 484
             |||||||||||||||||||||
Sbjct: 16468 gatagttcttcttggaaggtt 16488

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>gb|AC122283.3| Mus musculus BAC clone RP23-242G6 from chromosome 10, complete
            sequence
          Length = 184346

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 944  gaatttacacaactcaagaggctgccttcagaa 976
            |||||||||||||| |||||| |||||| ||||
Sbjct: 4896 gaatttacacaacttaagaggatgccttaagaa 4864

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>gb|AC140291.2| Mus musculus BAC clone RP24-326N12 from chromosome 5, complete sequence
          Length = 167269

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 464    gatagttcttcttggaaggtt 484
              |||||||||||||||||||||
Sbjct: 108886 gatagttcttcttggaaggtt 108906

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>gb|AC120548.15| Mus musculus chromosome 17, clone RP23-211H11, complete sequence
          Length = 198829

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 375   tttaattccttctatgatttt 395
             |||||||||||||||||||||
Sbjct: 11423 tttaattccttctatgatttt 11403

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>dbj|AK002123.1| Homo sapiens cDNA FLJ11261 fis, clone PLACE1009090
          Length = 3097

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1091 ttactccaattatttctactt 1111
            |||||||||||||||||||||
Sbjct: 2016 ttactccaattatttctactt 1996

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>gb|AY077465.1| Xenorhabdus nematophila strain ATCC 19061 symbiosis region 1, partial
            sequence
          Length = 5050

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1091 ttactccaattatttctactt 1111
            |||||||||||||||||||||
Sbjct: 1825 ttactccaattatttctactt 1805

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>gb|AC100868.2| Homo sapiens chromosome 8, clone RP11-246K8, complete sequence
          Length = 160939

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1091  ttactccaattatttctactt 1111
             |||||||||||||||||||||
Sbjct: 55093 ttactccaattatttctactt 55073

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>gb|AC026596.9| Homo sapiens chromosome 8, clone RP11-380O15, complete sequence
          Length = 165158

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1091   ttactccaattatttctactt 1111
              |||||||||||||||||||||
Sbjct: 113147 ttactccaattatttctactt 113127

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>gb|AC092817.2| Homo sapiens chromosome 8, clone RP11-240B13, complete sequence
          Length = 168719

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1091  ttactccaattatttctactt 1111
             |||||||||||||||||||||
Sbjct: 33148 ttactccaattatttctactt 33168

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>ref|XM_687476.1| PREDICTED: Danio rerio similar to centrosome-associated protein 350
           (LOC564120), mRNA
          Length = 8789

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 218 gtactgcggtattgtatccgg 238
           |||||||||||||||||||||
Sbjct: 898 gtactgcggtattgtatccgg 878

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>gb|AC130669.17| Mus musculus chromosome 15, clone RP24-84O5, complete sequence
          Length = 205231

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1128   tgtatttgtacttaaaagtca 1148
              |||||||||||||||||||||
Sbjct: 183759 tgtatttgtacttaaaagtca 183779

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>gb|AC154881.6| Mus musculus chromosome 15, clone RP24-259H19, complete sequence
          Length = 180231

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1128 tgtatttgtacttaaaagtca 1148
            |||||||||||||||||||||
Sbjct: 3454 tgtatttgtacttaaaagtca 3474

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>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 195    gccgccgcccaggcctacttc 215
              |||||||||||||||||||||
Sbjct: 117170 gccgccgcccaggcctacttc 117190

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>gb|AC152417.3| Mus musculus BAC clone RP23-56I21 from chromosome 10, complete sequence
          Length = 233783

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 944   gaatttacacaactcaagaggctgccttcagaa 976
             |||||||||||||| |||||| |||||| ||||
Sbjct: 63329 gaatttacacaacttaagaggatgccttaagaa 63361

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>emb|CR381643.18| Zebrafish DNA sequence from clone DKEY-39N1 in linkage group 8, complete
              sequence
          Length = 217745

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 218    gtactgcggtattgtatccgg 238
              |||||||||||||||||||||
Sbjct: 124271 gtactgcggtattgtatccgg 124291

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>gb|AC132135.3| Mus musculus BAC clone RP23-268C21 from 10, complete sequence
          Length = 168874

 Score = 42.1 bits (21), Expect = 4.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 944   gaatttacacaactcaagaggctgccttcagaa 976
             |||||||||||||| |||||| |||||| ||||
Sbjct: 41672 gaatttacacaacttaagaggatgccttaagaa 41704


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 219,783,386
Number of extensions: 11801013
Number of successful extensions: 224125
Number of sequences better than 10.0: 29
Number of HSP's gapped: 224120
Number of HSP's successfully gapped: 50
Length of query: 1257
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1234
Effective length of database: 18,503,978,556
Effective search space: 22833909538104
Effective search space used: 22833909538104
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result